Rh7CG439900

Mitogen-activated protein kinase kinase kinase 1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
57596863 .. 57600378
3516 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG439900.1

Sequence Viewer

Length: 351 bp
ATGTTTTTCTTGTCTGTTTTCACTCTCCATTTATTCTATTGCAGTGATGGATTCTTTTTTGTTGTAAAGGAGGTTTCATTACTCGATCAAGGAAGCCAGGGAAAGCAGAGTTTTTTACAACTTAAGCAGTTACAGGATGAGACTAAGCTCTACATCTTACTTGAGCTTGTAACAAAAGGATCACTTGAAAGTCTCTATTCAAATTATCTCTTGAGAGATTCTCAAGTCTCTGTGTTCACAAGGCAGATTTTGAGTGGCTTGAAATATCTTCATGATCGTAATGTGCTCCATAGGGTATTTCGGAGCATATTGGTGATAAGACTTGTGGATATTAGATTATGCATTACATGA

Protein Analysis

116

Amino Acids

13.58

Weight (kDa)

9.0

Isoelectric Point (pI)

40.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 42 - 98 3.6e-10 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 43 - 101 6.2e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 187
AflII CTTAAG 1 cut(s) 122
AgsI TTSAA 3 cut(s) 188, 201, 262
AjnI CCWGG 1 cut(s) 96
AluBI AGCT 2 cut(s) 148, 166
AluI AGCT 2 cut(s) 148, 166
Alw21I GWGCWC 1 cut(s) 288
Alw26I GTCTC 3 cut(s) 134, 197, 232
AlwI GGATC 1 cut(s) 187
AsuHPI GGTGA 1 cut(s) 325
Bbv12I GWGCWC 1 cut(s) 288
BccI CCATC 1 cut(s) 41
BciT130I CCWGG 1 cut(s) 98
BcoDI GTCTC 3 cut(s) 134, 197, 232
BfrI CTTAAG 1 cut(s) 122
Bme1390I CCNGG 1 cut(s) 98
BmrFI CCNGG 1 cut(s) 98
BplI GAGNNNNNCTC 2 cut(s) 205, 237
BpuEI CTTGAG 3 cut(s) 182, 207, 232
BsaJI CCNNGG 1 cut(s) 97
BseBI CCWGG 1 cut(s) 98
BseDI CCNNGG 1 cut(s) 97
BseGI GGATG 1 cut(s) 142
BsiHKAI GWGCWC 1 cut(s) 288
BsmAI GTCTC 3 cut(s) 134, 197, 232
Bsp1286I GDGCHC 1 cut(s) 288
Bsp143I GATC 3 cut(s) 85, 179, 274
BspHI TCATGA 1 cut(s) 271
BspPI GGATC 1 cut(s) 187
BspTI CTTAAG 1 cut(s) 122
BssECI CCNNGG 1 cut(s) 97
BssMI GATC 3 cut(s) 85, 179, 274
Bst2UI CCWGG 1 cut(s) 98
BstAFI CTTAAG 1 cut(s) 122
BstDEI CTNAG 1 cut(s) 144
BstF5I GGATG 1 cut(s) 142
BstKTI GATC 3 cut(s) 88, 182, 277
BstMAI GTCTC 3 cut(s) 134, 197, 232
BstMBI GATC 3 cut(s) 85, 179, 274
BstNI CCWGG 1 cut(s) 98
BstSCI CCNGG 1 cut(s) 96
BtsCI GGATG 1 cut(s) 142
BtsI GCAGTG 1 cut(s) 49
BtsIMutI CAGTG 1 cut(s) 49
CciI TCATGA 1 cut(s) 271
CviAII CATG 2 cut(s) 272, 348
CviJI RGCY 4 cut(s) 96, 148, 166, 258
CviKI_1 RGCY 4 cut(s) 96, 148, 166, 258
DdeI CTNAG 1 cut(s) 144
DpnI GATC 3 cut(s) 87, 181, 276
DpnII GATC 3 cut(s) 85, 179, 274
EcoRII CCWGG 1 cut(s) 96
EcoT22I ATGCAT 1 cut(s) 344
FaeI CATG 2 cut(s) 275, 351
FaiI YATR 5 cut(s) 273, 291, 308, 340, 349
FalI AAGNNNNNCTT 2 cut(s) 168, 200
FatI CATG 2 cut(s) 271, 347
FokI GGATG 1 cut(s) 149
Hin1II CATG 2 cut(s) 275, 351
HinfI GANTC 2 cut(s) 51, 218
HphI GGTGA 1 cut(s) 325
Hpy166II GTNNAC 1 cut(s) 237
Hpy188I TCNGA 1 cut(s) 303
Hpy188III TCNNGA 2 cut(s) 211, 272
Hpy8I GTNNAC 1 cut(s) 237
HpyCH4V TGCA 2 cut(s) 42, 342
HpyF3I CTNAG 1 cut(s) 144
Hsp92II CATG 2 cut(s) 275, 351
Kzo9I GATC 3 cut(s) 85, 179, 274
LmnI GCTCC 2 cut(s) 291, 303
LpnPI CCDG 3 cut(s) 83, 110, 119
MaeIII GTNAC 2 cut(s) 129, 169
MalI GATC 3 cut(s) 87, 181, 276
MboI GATC 3 cut(s) 85, 179, 274
MboII GAAGA 1 cut(s) 260
MhlI GDGCHC 1 cut(s) 288
MluCI AATT 1 cut(s) 202
MnlI CCTC 1 cut(s) 64
Mph1103I ATGCAT 1 cut(s) 344
MseI TTAA 1 cut(s) 123
MslI CAYNNNNRTG 1 cut(s) 311
MspCI CTTAAG 1 cut(s) 122
MspR9I CCNGG 1 cut(s) 98
MvaI CCWGG 1 cut(s) 98
NdeII GATC 3 cut(s) 85, 179, 274
NlaIII CATG 2 cut(s) 275, 351
NsiI ATGCAT 1 cut(s) 344
PagI TCATGA 1 cut(s) 271
PfeI GAWTC 2 cut(s) 51, 218
Psp6I CCWGG 1 cut(s) 96
PspGI CCWGG 1 cut(s) 96
RseI CAYNNNNRTG 1 cut(s) 311
SaqAI TTAA 1 cut(s) 123
Sau3AI GATC 3 cut(s) 85, 179, 274
ScrFI CCNGG 1 cut(s) 98
SduI GDGCHC 1 cut(s) 288
SetI ASST 3 cut(s) 75, 150, 168
SmiMI CAYNNNNRTG 1 cut(s) 311
SmlI CTYRAG 4 cut(s) 122, 161, 211, 222
SmoI CTYRAG 4 cut(s) 122, 161, 211, 222
Sse9I AATT 1 cut(s) 202
StyD4I CCNGG 1 cut(s) 96
TaqI TCGA 1 cut(s) 84
TasI AATT 1 cut(s) 202
TfiI GAWTC 2 cut(s) 51, 218
Tru1I TTAA 1 cut(s) 123
Tru9I TTAA 1 cut(s) 123
TscAI CASTG 1 cut(s) 49
TspDTI ATGAA 2 cut(s) 66, 260
TspRI CASTG 1 cut(s) 49
Vha464I CTTAAG 1 cut(s) 122
Zsp2I ATGCAT 1 cut(s) 344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.