No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g28951 FvH4_5g00951 |
| malus_domestica | MD04G1076500.v1.1 MD04G1076600.v1.1 MD04G1076700.v1.1 |
| prunus_persica | Prupe.5G082500_v2.0.a1 Prupe.5G082700_v2.0.a1 Prupe.5G082800_v2.0.a1 Prupe.5G083100_v2.0.a1 Prupe.5G083200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0200431 |
| rosa_laevigata | RLG00000003726 RLG00000034854 |
| rosa_multiflora | Rmu_sc0000068.1_g000008 Rmu_sc0000617.1_g000040 Rmu_sc0014686.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00256000 |
| rosa_rugosa | Rorug07G0060200 |
| rosa_samantha | Rh5BG360300 Rh5BG360400 Rh5CG385300 Rh5DG375000 Rh5DG375100 Rh7AG185600 Rh7BG188700 Rh7CG195900 Rh7DG189700 |
| rosa_wichuraiana | Rw5G032940 Rw7G016270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 5 |
| AccII | CGCG | 1 cut(s) | 238 |
| AciI | CCGC | 1 cut(s) | 238 |
| AgsI | TTSAA | 1 cut(s) | 168 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 76 |
| AjnI | CCWGG | 1 cut(s) | 251 |
| AluBI | AGCT | 1 cut(s) | 147 |
| AluI | AGCT | 1 cut(s) | 147 |
| Alw26I | GTCTC | 1 cut(s) | 103 |
| AsuHPI | GGTGA | 1 cut(s) | 109 |
| BauI | CACGAG | 1 cut(s) | 93 |
| BbsI | GAAGAC | 1 cut(s) | 162 |
| BceAI | ACGGC | 1 cut(s) | 63 |
| BciT130I | CCWGG | 1 cut(s) | 253 |
| BciVI | GTATCC | 1 cut(s) | 235 |
| BcoDI | GTCTC | 1 cut(s) | 103 |
| BfmI | CTRYAG | 1 cut(s) | 31 |
| BfuI | GTATCC | 1 cut(s) | 235 |
| Bme1390I | CCNGG | 1 cut(s) | 253 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 76 |
| BmrFI | CCNGG | 1 cut(s) | 253 |
| BmsI | GCATC | 1 cut(s) | 212 |
| BpiI | GAAGAC | 1 cut(s) | 162 |
| BpmI | CTGGAG | 1 cut(s) | 235 |
| BseBI | CCWGG | 1 cut(s) | 253 |
| BseGI | GGATG | 1 cut(s) | 261 |
| BseMII | CTCAG | 2 cut(s) | 147, 157 |
| Bsh1236I | CGCG | 1 cut(s) | 238 |
| BsmAI | GTCTC | 1 cut(s) | 103 |
| BspACI | CCGC | 1 cut(s) | 238 |
| BspCNI | CTCAG | 2 cut(s) | 146, 156 |
| BspFNI | CGCG | 1 cut(s) | 238 |
| BssSI | CACGAG | 1 cut(s) | 93 |
| Bst2BI | CACGAG | 1 cut(s) | 93 |
| Bst2UI | CCWGG | 1 cut(s) | 253 |
| BstDEI | CTNAG | 2 cut(s) | 133, 143 |
| BstF5I | GGATG | 1 cut(s) | 261 |
| BstFNI | CGCG | 1 cut(s) | 238 |
| BstMAI | GTCTC | 1 cut(s) | 103 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 200 |
| BstNI | CCWGG | 1 cut(s) | 253 |
| BstSCI | CCNGG | 1 cut(s) | 251 |
| BstSFI | CTRYAG | 1 cut(s) | 31 |
| BstUI | CGCG | 1 cut(s) | 238 |
| BstV2I | GAAGAC | 1 cut(s) | 162 |
| BsuI | GTATCC | 1 cut(s) | 235 |
| BtsCI | GGATG | 1 cut(s) | 261 |
| CseI | GACGC | 1 cut(s) | 183 |
| CviJI | RGCY | 3 cut(s) | 50, 147, 171 |
| CviKI_1 | RGCY | 3 cut(s) | 50, 147, 171 |
| DdeI | CTNAG | 2 cut(s) | 133, 143 |
| DriI | GACNNNNNGTC | 1 cut(s) | 76 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 76 |
| Eco32I | GATATC | 1 cut(s) | 261 |
| EcoRII | CCWGG | 1 cut(s) | 251 |
| EcoRV | GATATC | 1 cut(s) | 261 |
| FaiI | YATR | 9 cut(s) | 33, 38, 40, 42, 54, 188, 222, 224, 269 |
| FauI | CCCGC | 1 cut(s) | 231 |
| FblI | GTMKAC | 1 cut(s) | 5 |
| FokI | GGATG | 1 cut(s) | 268 |
| GsuI | CTGGAG | 1 cut(s) | 235 |
| HgaI | GACGC | 1 cut(s) | 183 |
| HincII | GTYRAC | 1 cut(s) | 6 |
| HindII | GTYRAC | 1 cut(s) | 6 |
| HinfI | GANTC | 2 cut(s) | 88, 139 |
| HphI | GGTGA | 1 cut(s) | 109 |
| Hpy166II | GTNNAC | 1 cut(s) | 6 |
| Hpy188I | TCNGA | 1 cut(s) | 136 |
| Hpy8I | GTNNAC | 1 cut(s) | 6 |
| Hpy99I | CGWCG | 1 cut(s) | 74 |
| HpyCH4IV | ACGT | 1 cut(s) | 72 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 200 |
| HpyF3I | CTNAG | 2 cut(s) | 133, 143 |
| HpySE526I | ACGT | 1 cut(s) | 72 |
| LpnPI | CCDG | 3 cut(s) | 133, 238, 265 |
| LweI | GCATC | 1 cut(s) | 212 |
| MaeII | ACGT | 1 cut(s) | 72 |
| MaeIII | GTNAC | 2 cut(s) | 43, 115 |
| MboII | GAAGA | 2 cut(s) | 135, 167 |
| MluCI | AATT | 2 cut(s) | 102, 163 |
| MlyI | GAGTC | 1 cut(s) | 97 |
| MnlI | CCTC | 3 cut(s) | 19, 102, 240 |
| MseI | TTAA | 1 cut(s) | 283 |
| MslI | CAYNNNNRTG | 1 cut(s) | 41 |
| MspR9I | CCNGG | 1 cut(s) | 253 |
| MvaI | CCWGG | 1 cut(s) | 253 |
| MvnI | CGCG | 1 cut(s) | 238 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 200 |
| NmuCI | GTSAC | 2 cut(s) | 43, 115 |
| PfeI | GAWTC | 1 cut(s) | 139 |
| PfoI | TCCNGGA | 1 cut(s) | 251 |
| PleI | GAGTC | 1 cut(s) | 96 |
| PpsI | GAGTC | 1 cut(s) | 96 |
| Psp6I | CCWGG | 1 cut(s) | 251 |
| PspGI | CCWGG | 1 cut(s) | 251 |
| RseI | CAYNNNNRTG | 1 cut(s) | 41 |
| SalI | GTCGAC | 1 cut(s) | 4 |
| SaqAI | TTAA | 1 cut(s) | 283 |
| SchI | GAGTC | 1 cut(s) | 97 |
| ScrFI | CCNGG | 1 cut(s) | 253 |
| SetI | ASST | 5 cut(s) | 11, 64, 75, 149, 232 |
| SfaNI | GCATC | 1 cut(s) | 212 |
| SfcI | CTRYAG | 1 cut(s) | 31 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 41 |
| Sse9I | AATT | 2 cut(s) | 102, 163 |
| SsiI | CCGC | 1 cut(s) | 238 |
| StyD4I | CCNGG | 1 cut(s) | 251 |
| TaiI | ACGT | 1 cut(s) | 75 |
| TaqI | TCGA | 3 cut(s) | 5, 86, 153 |
| TasI | AATT | 2 cut(s) | 102, 163 |
| TfiI | GAWTC | 1 cut(s) | 139 |
| Tru1I | TTAA | 1 cut(s) | 283 |
| Tru9I | TTAA | 1 cut(s) | 283 |
| TseFI | GTSAC | 2 cut(s) | 43, 115 |
| Tsp45I | GTSAC | 2 cut(s) | 43, 115 |
| TspDTI | ATGAA | 1 cut(s) | 139 |
| XmiI | GTMKAC | 1 cut(s) | 5 |