Rh7AG437200

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0004883
Physical Location & Seq
Reverse (-)
58844139 .. 58850832
6694 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG437200.1

Sequence Viewer

Length: 288 bp
ATGCTGGTCAAAGGTAGCTACTACACGGGTACTGATGATGGAGCTGTAAACTTGATCAAAATTGATAGTGGAATTGGAAGTTCAATTTTGTTAGTTTGGAATGAAGAAAGTGATGGAATGGGACTGATCCCAATCGAGGAAGCTAGCCCCAAGTCTTGTTTCATCGATCCGAGAGGTGGTGGTGAAACGAGTGGCGACCCCTCGTGTTCTGACATTGGGAGGATTTTCATGGTGGCTAGGTTTTCTCTTTGGGCACTAGGGTTTCTTATGGGGTTAATTGGGCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
ko04010 map04010
Pfam Domains
Protein Families
EDR1 Pkinase_Tyr

Protein Analysis

95

Amino Acids

10.02

Weight (kDa)

4.24

Isoelectric Point (pI)

38.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 121, 161
AfaI GTAC 1 cut(s) 31
AfiI CCNNNNNNNGG 2 cut(s) 136, 176
AgsI TTSAA 1 cut(s) 84
AjuI GAANNNNNNNTTGG 2 cut(s) 143, 175
AluBI AGCT 3 cut(s) 18, 44, 143
AluI AGCT 3 cut(s) 18, 44, 143
AlwI GGATC 2 cut(s) 121, 161
AsuHPI GGTGA 1 cut(s) 194
AsuNHI GCTAGC 1 cut(s) 143
BaeGI GKGCMC 1 cut(s) 256
BanII GRGCYC 1 cut(s) 285
BauI CACGAG 1 cut(s) 202
BccI CCATC 2 cut(s) 32, 107
BclI TGATCA 1 cut(s) 54
BfaI CTAG 3 cut(s) 144, 237, 257
BmtI GCTAGC 1 cut(s) 147
Bsa29I ATCGAT 1 cut(s) 165
BsaBI GATNNNNATC 1 cut(s) 131
Bsc4I CCNNNNNNNGG 2 cut(s) 136, 176
Bse8I GATNNNNATC 1 cut(s) 131
BseCI ATCGAT 1 cut(s) 165
BseJI GATNNNNATC 1 cut(s) 131
BseLI CCNNNNNNNGG 2 cut(s) 136, 176
BseSI GKGCMC 1 cut(s) 256
BshVI ATCGAT 1 cut(s) 165
BslFI GGGAC 1 cut(s) 135
BslI CCNNNNNNNGG 2 cut(s) 136, 176
BsmFI GGGAC 1 cut(s) 135
Bsp1286I GDGCHC 2 cut(s) 256, 285
Bsp143I GATC 3 cut(s) 54, 126, 166
BspDI ATCGAT 1 cut(s) 165
BspOI GCTAGC 1 cut(s) 147
BspPI GGATC 2 cut(s) 121, 161
BssMI GATC 3 cut(s) 54, 126, 166
BssSI CACGAG 1 cut(s) 202
Bst2BI CACGAG 1 cut(s) 202
BstC8I GCNNGC 1 cut(s) 145
BstKTI GATC 3 cut(s) 57, 129, 169
BstMBI GATC 3 cut(s) 54, 126, 166
BstSLI GKGCMC 1 cut(s) 256
Bsu15I ATCGAT 1 cut(s) 165
BsuTUI ATCGAT 1 cut(s) 165
Cac8I GCNNGC 1 cut(s) 145
ClaI ATCGAT 1 cut(s) 165
Csp6I GTAC 1 cut(s) 30
CviAII CATG 1 cut(s) 229
CviJI RGCY 6 cut(s) 18, 44, 143, 147, 236, 283
CviKI_1 RGCY 6 cut(s) 18, 44, 143, 147, 236, 283
CviQI GTAC 1 cut(s) 30
DpnI GATC 3 cut(s) 56, 128, 168
DpnII GATC 3 cut(s) 54, 126, 166
Eco24I GRGCYC 1 cut(s) 285
EcoT38I GRGCYC 1 cut(s) 285
FaeI CATG 1 cut(s) 232
FaiI YATR 2 cut(s) 230, 269
FaqI GGGAC 1 cut(s) 135
FatI CATG 1 cut(s) 228
FbaI TGATCA 1 cut(s) 54
FriOI GRGCYC 1 cut(s) 285
FspBI CTAG 3 cut(s) 144, 237, 257
Hin1II CATG 1 cut(s) 232
HphI GGTGA 1 cut(s) 194
Hpy166II GTNNAC 1 cut(s) 49
Hpy188I TCNGA 3 cut(s) 171, 211, 287
Hpy8I GTNNAC 1 cut(s) 49
Hsp92II CATG 1 cut(s) 232
Ksp22I TGATCA 1 cut(s) 54
Kzo9I GATC 3 cut(s) 54, 126, 166
LmnI GCTCC 1 cut(s) 41
MaeI CTAG 3 cut(s) 144, 237, 257
MalI GATC 3 cut(s) 56, 128, 168
MboI GATC 3 cut(s) 54, 126, 166
MboII GAAGA 1 cut(s) 116
MhlI GDGCHC 2 cut(s) 256, 285
MluCI AATT 4 cut(s) 60, 72, 84, 276
MnlI CCTC 4 cut(s) 130, 167, 211, 213
MseI TTAA 1 cut(s) 275
NdeII GATC 3 cut(s) 54, 126, 166
NheI GCTAGC 1 cut(s) 143
NlaIII CATG 1 cut(s) 232
RsaI GTAC 1 cut(s) 31
RsaNI GTAC 1 cut(s) 30
SaqAI TTAA 1 cut(s) 275
Sau3AI GATC 3 cut(s) 54, 126, 166
SduI GDGCHC 2 cut(s) 256, 285
SetI ASST 6 cut(s) 16, 20, 46, 145, 178, 242
Sse9I AATT 4 cut(s) 60, 72, 84, 276
SspMI CTAG 3 cut(s) 144, 237, 257
TaqI TCGA 2 cut(s) 135, 165
TasI AATT 4 cut(s) 60, 72, 84, 276
Tru1I TTAA 1 cut(s) 275
Tru9I TTAA 1 cut(s) 275
TspDTI ATGAA 3 cut(s) 117, 151, 217
XspI CTAG 3 cut(s) 144, 237, 257
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.