Rh7CG312400

Transport and Golgi organization 2 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0002621
Physical Location & Seq
Forward (+)
33259916 .. 33260905
990 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG312400.1

Sequence Viewer

Length: 726 bp
ATGTACAGGCCTACGAAGCCGGTAGGATGGTGGGAAGGTTGTGAGATATTAGGCGGGAGAGATGAGGTTGCAGGAGGGACATGGCTGGCTTGTTCAAGAGGAGGGAGAGTTGCTTTGCTTACAAACGTGCTCGAGCTTCATACCTCACCGGAGGCAAAGAGCCGGGGAGACCTGCCTGTGCTTTTCTTAGAGAGCTTGAAGAGTCCAAAAGAATTTGCACAAGAGTTGGTTAAAGAGGCTCACCAGTATAATGGGTTTAACCTGATATTGGCAGATCTTCAATCCAAAACCATGGTTTACCTCTCCAACAGACCAAAAGGAGAGCCTATTCTCATTCAAGAGGTTTCTCCAGGCATTCATGTGCTTTCCAATGCAAAGCTTGACTCACCCTGGCACAAGGCTCAGCGCTTGCGGCTAAATTTTCAGAAAGAGCTTATCAAGTATGGAGAAGGTGAAATACCAGTGAAGGAACTGATCCAAAAACTAATGAAGGACAAAGTTAAAGCTGATAAAAGCAAATTACCTCGTATATGTGAACTGGACTGGGAGTATAAACTGAGCTCCATATTTGTTGAAGCTGACACTCCACTGGGACGCTATGGCACCAGGAGCAGTGCTGCAGTGTCAGTAAGACAAAATGGGAACCTGAGTTTTTATGAGAGCTATCTTGATAACGGCATTTGGAAGGAAAGGACTGTGAAGTACCAAATTCAGAAGCTGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TANGO2

Protein Analysis

241

Amino Acids

27.38

Weight (kDa)

9.18

Isoelectric Point (pI)

33.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TANGO2 PF05742 3 - 224 9.2e-59 Transport and Golgi organisation 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 180
AccB1I GGYRCC 1 cut(s) 602
AciI CCGC 2 cut(s) 54, 412
AclWI GGATC 1 cut(s) 469
AcsI RAATTY 3 cut(s) 212, 418, 708
AfaI GTAC 2 cut(s) 5, 704
AfeI AGCGCT 1 cut(s) 407
AfiI CCNNNNNNNGG 1 cut(s) 268
AgsI TTSAA 5 cut(s) 96, 199, 281, 338, 575
AjnI CCWGG 3 cut(s) 349, 389, 605
AluBI AGCT 9 cut(s) 136, 195, 379, 433, 506, 561, 578, 663, 718
AluI AGCT 9 cut(s) 136, 195, 379, 433, 506, 561, 578, 663, 718
Alw21I GWGCWC 2 cut(s) 132, 563
Alw26I GTCTC 1 cut(s) 162
AlwI GGATC 1 cut(s) 469
AlwNI CAGNNNCTG 1 cut(s) 718
Ama87I CYCGRG 1 cut(s) 131
Aor51HI AGCGCT 1 cut(s) 407
AoxI GGCC 1 cut(s) 8
ApeKI GCWGC 1 cut(s) 617
ApoI RAATTY 3 cut(s) 212, 418, 708
AspLEI GCGC 1 cut(s) 408
AsuC2I CCSGG 1 cut(s) 164
AsuHPI GGTGA 4 cut(s) 138, 233, 378, 464
AvaI CYCGRG 1 cut(s) 131
BanI GGYRCC 1 cut(s) 602
BanII GRGCYC 1 cut(s) 563
BarI GAAGNNNNNNTAC 2 cut(s) 441, 473
Bbv12I GWGCWC 2 cut(s) 132, 563
BbvI GCAGC 1 cut(s) 604
BccI CCATC 1 cut(s) 21
BceAI ACGGC 1 cut(s) 691
BciT130I CCWGG 3 cut(s) 351, 391, 607
BcnI CCSGG 1 cut(s) 164
BcoDI GTCTC 1 cut(s) 162
BfmI CTRYAG 1 cut(s) 618
BfoI RGCGCY 1 cut(s) 409
BfuAI ACCTGC 1 cut(s) 180
BglII AGATCT 1 cut(s) 274
BisI GCNGC 2 cut(s) 413, 618
BlpI GCTNAGC 1 cut(s) 402
BlsI GCNGC 2 cut(s) 414, 619
Bme1390I CCNGG 4 cut(s) 164, 351, 391, 607
BmeT110I CYCGRG 1 cut(s) 131
BmiI GGNNCC 2 cut(s) 604, 644
BmrFI CCNGG 4 cut(s) 164, 351, 391, 607
BmrI ACTGGG 2 cut(s) 553, 599
BmuI ACTGGG 2 cut(s) 553, 599
BpmI CTGGAG 1 cut(s) 333
Bpu1102I GCTNAGC 1 cut(s) 402
BpuMI CCSGG 1 cut(s) 164
BsaI GGTCTC 1 cut(s) 162
BsaJI CCNNGG 3 cut(s) 163, 291, 389
BsaWI WCCGGW 1 cut(s) 148
BsaXI ACNNNNNCTCC 2 cut(s) 93, 123
Bsc4I CCNNNNNNNGG 1 cut(s) 268
Bse118I RCCGGY 1 cut(s) 19
Bse1I ACTGG 5 cut(s) 244, 461, 543, 548, 594
BseBI CCWGG 3 cut(s) 351, 391, 607
BseDI CCNNGG 3 cut(s) 163, 291, 389
BseGI GGATG 1 cut(s) 32
BseLI CCNNNNNNNGG 1 cut(s) 268
BseMII CTCAG 3 cut(s) 416, 548, 638
BseNI ACTGG 5 cut(s) 244, 461, 543, 548, 594
BseRI GAGGAG 1 cut(s) 114
BseXI GCAGC 1 cut(s) 604
BshFI GGCC 1 cut(s) 10
BshNI GGYRCC 1 cut(s) 602
BsiHKAI GWGCWC 2 cut(s) 132, 563
BsiHKCI CYCGRG 1 cut(s) 131
BsiSI CCGG 3 cut(s) 20, 149, 163
BslFI GGGAC 2 cut(s) 91, 606
BslI CCNNNNNNNGG 1 cut(s) 268
BsmAI GTCTC 1 cut(s) 162
BsmFI GGGAC 2 cut(s) 91, 606
BsmI GAATGC 1 cut(s) 354
BsnI GGCC 1 cut(s) 10
Bso31I GGTCTC 1 cut(s) 162
BsoBI CYCGRG 1 cut(s) 131
Bsp1286I GDGCHC 2 cut(s) 132, 563
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 2 cut(s) 274, 474
Bsp1720I GCTNAGC 1 cut(s) 402
Bsp19I CCATGG 1 cut(s) 291
BspACI CCGC 2 cut(s) 54, 412
BspANI GGCC 1 cut(s) 10
BspCNI CTCAG 3 cut(s) 415, 549, 639
BspLI GGNNCC 2 cut(s) 604, 644
BspMAI CTGCAG 1 cut(s) 622
BspMI ACCTGC 1 cut(s) 180
BspPI GGATC 1 cut(s) 469
BspT107I GGYRCC 1 cut(s) 602
BspTNI GGTCTC 1 cut(s) 162
BsrFI RCCGGY 1 cut(s) 19
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 5 cut(s) 244, 461, 543, 548, 594
BssAI RCCGGY 1 cut(s) 19
BssECI CCNNGG 3 cut(s) 163, 291, 389
BssMI GATC 2 cut(s) 274, 474
BssT1I CCWWGG 1 cut(s) 291
Bst2UI CCWGG 3 cut(s) 351, 391, 607
Bst4CI ACNGT 1 cut(s) 697
Bst6I CTCTTC 1 cut(s) 194
BstAUI TGTACA 1 cut(s) 3
BstC8I GCNNGC 2 cut(s) 87, 410
BstDEI CTNAG 4 cut(s) 187, 402, 557, 647
BstDSI CCRYGG 1 cut(s) 291
BstF5I GGATG 1 cut(s) 32
BstH2I RGCGCY 1 cut(s) 409
BstHHI GCGC 1 cut(s) 408
BstKTI GATC 2 cut(s) 277, 477
BstMAI GTCTC 1 cut(s) 162
BstMBI GATC 2 cut(s) 274, 474
BstMWI GCNNNNNNNGC 3 cut(s) 16, 412, 609
BstNI CCWGG 3 cut(s) 351, 391, 607
BstSCI CCNGG 4 cut(s) 162, 349, 389, 605
BstSFI CTRYAG 1 cut(s) 618
BstV1I GCAGC 1 cut(s) 604
BstX2I RGATCY 1 cut(s) 274
BstXI CCANNNNNNTGG 2 cut(s) 251, 292
BstYI RGATCY 1 cut(s) 274
BsuRI GGCC 1 cut(s) 10
BtgI CCRYGG 1 cut(s) 291
BtsCI GGATG 1 cut(s) 32
BtsI GCAGTG 2 cut(s) 619, 627
BtsIMutI CAGTG 4 cut(s) 468, 587, 619, 627
BveI ACCTGC 1 cut(s) 180
Cac8I GCNNGC 2 cut(s) 87, 410
CaiI CAGNNNCTG 1 cut(s) 718
CfoI GCGC 1 cut(s) 408
Cfr10I RCCGGY 1 cut(s) 19
CseI GACGC 1 cut(s) 603
Csp6I GTAC 2 cut(s) 4, 703
CviAII CATG 3 cut(s) 81, 292, 359
CviQI GTAC 2 cut(s) 4, 703
DdeI CTNAG 4 cut(s) 187, 402, 557, 647
DpnI GATC 2 cut(s) 276, 476
DpnII GATC 2 cut(s) 274, 474
Eam1104I CTCTTC 1 cut(s) 194
EarI CTCTTC 1 cut(s) 194
Ecl136II GAGCTC 1 cut(s) 561
Eco130I CCWWGG 1 cut(s) 291
Eco147I AGGCCT 1 cut(s) 10
Eco24I GRGCYC 1 cut(s) 563
Eco31I GGTCTC 1 cut(s) 162
Eco47III AGCGCT 1 cut(s) 407
Eco53kI GAGCTC 1 cut(s) 561
Eco88I CYCGRG 1 cut(s) 131
EcoICRI GAGCTC 1 cut(s) 561
EcoRII CCWGG 3 cut(s) 349, 389, 605
EcoT14I CCWWGG 1 cut(s) 291
EcoT38I GRGCYC 1 cut(s) 563
ErhI CCWWGG 1 cut(s) 291
FaeI CATG 3 cut(s) 84, 295, 362
FaqI GGGAC 2 cut(s) 91, 606
FatI CATG 3 cut(s) 80, 291, 358
FauI CCCGC 1 cut(s) 47
Fnu4HI GCNGC 2 cut(s) 413, 618
FokI GGATG 1 cut(s) 39
FriOI GRGCYC 1 cut(s) 563
Fsp4HI GCNGC 2 cut(s) 413, 618
GlaI GCGC 1 cut(s) 407
GluI GCNGC 2 cut(s) 413, 618
GsuI CTGGAG 1 cut(s) 333
HaeII RGCGCY 1 cut(s) 409
HaeIII GGCC 1 cut(s) 10
HapII CCGG 3 cut(s) 20, 149, 163
HgaI GACGC 1 cut(s) 603
HhaI GCGC 1 cut(s) 408
Hin1II CATG 3 cut(s) 84, 295, 362
Hin6I GCGC 1 cut(s) 406
HinP1I GCGC 1 cut(s) 406
HindIII AAGCTT 1 cut(s) 377
HinfI GANTC 2 cut(s) 202, 383
HpaII CCGG 3 cut(s) 20, 149, 163
HphI GGTGA 4 cut(s) 138, 233, 378, 464
Hpy166II GTNNAC 2 cut(s) 298, 536
Hpy188I TCNGA 2 cut(s) 426, 714
Hpy188III TCNNGA 3 cut(s) 96, 338, 668
Hpy8I GTNNAC 2 cut(s) 298, 536
HpyAV CCTTC 5 cut(s) 29, 443, 460, 484, 679
HpyCH4III ACNGT 1 cut(s) 697
HpyCH4IV ACGT 1 cut(s) 126
HpyCH4V TGCA 4 cut(s) 71, 218, 374, 620
HpyF10VI GCNNNNNNNGC 3 cut(s) 16, 412, 609
HpyF3I CTNAG 4 cut(s) 187, 402, 557, 647
HpySE526I ACGT 1 cut(s) 126
Hsp92II CATG 3 cut(s) 84, 295, 362
HspAI GCGC 1 cut(s) 406
Kzo9I GATC 2 cut(s) 274, 474
LmnI GCTCC 2 cut(s) 566, 609
Lsp1109I GCAGC 1 cut(s) 604
MaeII ACGT 1 cut(s) 126
MalI GATC 2 cut(s) 276, 476
MboI GATC 2 cut(s) 274, 474
MboII GAAGA 2 cut(s) 211, 269
MflI RGATCY 1 cut(s) 274
MhlI GDGCHC 2 cut(s) 132, 563
MluCI AATT 4 cut(s) 212, 418, 518, 708
MlyI GAGTC 2 cut(s) 211, 377
MmeI TCCRAC 1 cut(s) 330
MseI TTAA 3 cut(s) 231, 258, 501
MslI CAYNNNNRTG 1 cut(s) 359
MspI CCGG 3 cut(s) 20, 149, 163
MspR9I CCNGG 4 cut(s) 164, 351, 391, 607
Mva1269I GAATGC 1 cut(s) 354
MvaI CCWGG 3 cut(s) 351, 391, 607
MwoI GCNNNNNNNGC 3 cut(s) 16, 412, 609
NciI CCSGG 1 cut(s) 164
NcoI CCATGG 1 cut(s) 291
NdeII GATC 2 cut(s) 274, 474
NlaIII CATG 3 cut(s) 84, 295, 362
NlaIV GGNNCC 2 cut(s) 604, 644
PaeR7I CTCGAG 1 cut(s) 131
PceI AGGCCT 1 cut(s) 10
PctI GAATGC 1 cut(s) 354
PkrI GCNGC 2 cut(s) 414, 619
PleI GAGTC 2 cut(s) 210, 377
PpsI GAGTC 2 cut(s) 210, 377
Psp124BI GAGCTC 1 cut(s) 563
Psp6I CCWGG 3 cut(s) 349, 389, 605
PspGI CCWGG 3 cut(s) 349, 389, 605
PspN4I GGNNCC 2 cut(s) 604, 644
PspXI VCTCGAGB 1 cut(s) 131
PstI CTGCAG 1 cut(s) 622
PstNI CAGNNNCTG 1 cut(s) 718
PsuI RGATCY 1 cut(s) 274
RsaI GTAC 2 cut(s) 5, 704
RsaNI GTAC 2 cut(s) 4, 703
RseI CAYNNNNRTG 1 cut(s) 359
SacI GAGCTC 1 cut(s) 563
SaqAI TTAA 3 cut(s) 231, 258, 501
SatI GCNGC 2 cut(s) 413, 618
Sau3AI GATC 2 cut(s) 274, 474
SchI GAGTC 2 cut(s) 211, 377
ScrFI CCNGG 4 cut(s) 164, 351, 391, 607
SduI GDGCHC 2 cut(s) 132, 563
SfcI CTRYAG 1 cut(s) 618
Sfr274I CTCGAG 1 cut(s) 131
SlaI CTCGAG 1 cut(s) 131
SmiMI CAYNNNNRTG 1 cut(s) 359
SmlI CTYRAG 1 cut(s) 131
SmoI CTYRAG 1 cut(s) 131
Sse9I AATT 4 cut(s) 212, 418, 518, 708
SseBI AGGCCT 1 cut(s) 10
SsiI CCGC 2 cut(s) 54, 412
SstI GAGCTC 1 cut(s) 563
StuI AGGCCT 1 cut(s) 10
StyD4I CCNGG 4 cut(s) 162, 349, 389, 605
StyI CCWWGG 1 cut(s) 291
TaaI ACNGT 1 cut(s) 697
TaiI ACGT 1 cut(s) 129
TaqI TCGA 1 cut(s) 132
TasI AATT 4 cut(s) 212, 418, 518, 708
TatI WGTACW 1 cut(s) 3
TauI GCSGC 1 cut(s) 415
Tru1I TTAA 3 cut(s) 231, 258, 501
Tru9I TTAA 3 cut(s) 231, 258, 501
TscAI CASTG 4 cut(s) 468, 594, 619, 627
TseI GCWGC 1 cut(s) 617
TspDTI ATGAA 3 cut(s) 128, 347, 503
TspRI CASTG 4 cut(s) 468, 594, 619, 627
XapI RAATTY 3 cut(s) 212, 418, 708
XhoI CTCGAG 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.