AT1G54440

Exosome component 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0004155
Physical Location & Seq
Forward (+)
20322964 .. 20328238
5275 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G54440.4

Sequence Viewer

Length: 1914 bp
ATGAGATTTGATGATCCCATGGATGAGTTCAAGAGGAATCGAAAGATGGAGGAAGATTCGAAGAAGGTAATCGATGTGAAAGTGGCTGAGAGTGATAAGGGATTCGCGAAATTTGGCAAGGCAGAGGTTCCGTTTCATATACCGACGTTAACGAAGCCTCAAGAGGAGTATAAGATTTTGGTAGACAATGCTAATAATCCTTTTGAGCATGTTTTGTTGGAGAAGAGTGAAGACGGTCTTCGGTTCATTCATCCACTGGAGGAACTATCTGTGATGGACTTTGTTGATAGAAATCTAAGTGAGATGAGACCTGTTAAGCCTCTCCCATTGGAAGAGACTCCATTCAAGCTAGTTGAAGAAGTCAAAGATCTTGAGGACTTAGCTGCTGCATTGCAAAGTGTTGAAGAGTTTGCTGTCGATCTGGAGCATAATCAGTATAGAACTTTTCAAGGATTAACATGCTTGATGCAAATCTCTACTAGAACCGAGGATTATATTGTTGATATATTCAAGCTTTGGGATCACATTGGTCCTTATCTAAGGGAACTCTTCAAAGACCCTAAAAAGAAAAAGGTAATCCATGGAGCAGATCGAGATATTATTTGGCTTCAACGGGACTTTGGCATTTATGTCTGCAATCTTTTTGACACAGGACAGGCTTCAAGGGTGCTAAAGCTGGAGAGAAATAGTCTGGAATTTCTTCTGAAGCATTATTGTGGAGTTGCTGCAAACAAAGAATACCAAAAAGCAGACTGGAGAATAAGACCCCTTCCAGATGTAATGAAAAGATATGCTAGAGAAGATACACATTATCTTTTGTACATTTATGATGTAATGCGAATGGAGTTGCACACAATGGCAAAGGAAGATGAGCAATCTGACTCTCCTCTGGTAGAGGTGTACAAGCGCAGTTATGACGTGTGCATGCAACTATATGAAAAAGAGCTTTGGACTAGGGATTCATATCTTCACGTTTATGGGGTTCAGACAGGTAATCTCAATGCGGTTCAACTTTCCATTGTTGCGGGGCTTTGTGAATGGCGGGATCGGATTGCACGCGCAGATGATGAGAGCACCGGTTATGTATTGCCAAATAAAACTCTTTTTGACATAGCCAAGGAGATGCCAATTGTTGTTGCCCAGTTGCGCCGTTTGTTGAAGTCAAAGCTTCCTTACCTCGAGCGTAATTTTGACGCAGTGATCAGTGTCATCAGACGATCAATGCAAAATGCAGCGGCATTCGAGCCAGTTGTTCAATCTTTGAAAGATAGGCGTCCTGAAACAGTGGTTGAAATGAATATAGAACCTAAGATTGAGAAAACAGACACAGGAGCTTCAGCGTCTTCTCTGAGTCTGGAGAAGGTTTGTGTGGATGATTCAAAGAAACAAAGCAGTGGTTTTGGAGTTTTGCCGTTAAAGAGGAAGTTGGAAAGTGACAAAACGGTGGTTGAAAAGAATATCGAACCTAAGATTGAGAAAACAGGCACAGAAGCTTCAGCTTCTTCTCTGAGTTCGAAGAAGGTTTGTGTGGATGATTCAAAGAAACAAAGCAGTGGTTTTGGAGTTTTGCTGTCAAAGAGGAAGTTTGAAAGTGATAACAAGGTAAAAGAAGAGGTCAAAGTGTCCAAGTCCAAGCCAGATAAGGTAATCATAGTGGTGGATGATGATGATGATGATGATGATGATGAGTCTTATGAACAGAGCACGAAAGCCGCTGATGCTTTGGACAGAGTTTCGGAAACGCCTTCGAAGGGATCACCATCGTTGACTCAAAAGCCGAAGACATGTAATACAGAGGTTATTGTGTTAGACGATGATGATGACTCGGAAAGCAGAGAAGATGAAGACATGCGTAGGAGAAGTGAGAAACATAGGAGATTCATGAATATGAAACGTGGCTTTCTTAACATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000175 GO:0000178 GO:0000460 GO:0000785 GO:0000956 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006364 GO:0006396 GO:0006401 GO:0006402 GO:0006403 GO:0006725 GO:0006807 GO:0007549 GO:0008150 GO:0008152 GO:0008298 GO:0008334 GO:0008408 GO:0009048 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0010639 GO:0016070 GO:0016071 GO:0016072 GO:0016075 GO:0016458 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019219 GO:0019222 GO:0019439 GO:0022613 GO:0031047 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032204 GO:0032205 GO:0032210 GO:0032211 GO:0032259 GO:0032268 GO:0032270 GO:0032879 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0035327 GO:0040029 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043632 GO:0043633 GO:0043634 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044728 GO:0045934 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051246 GO:0051247 GO:0051641 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0071025 GO:0071027 GO:0071028 GO:0071029 GO:0071030 GO:0071033 GO:0071034 GO:0071035 GO:0071043 GO:0071044 GO:0071046 GO:0071048 GO:0071704 GO:0071840 GO:0080090 GO:0080188 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1902275 GO:1902464 GO:1902466 GO:1902494 GO:1904356 GO:1904357 GO:1904872 GO:1905269 GO:1905354 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
DNA_pol_A_exo1 HRDC PMC2NT

Protein Analysis

637

Amino Acids

73.48

Weight (kDa)

5.37

Isoelectric Point (pI)

50.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_pol_A_exo1 PF01612 118 - 283 1.4e-48 3'-5' exonuclease
HRDC PF00570 338 - 404 3.9e-12 HRDC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 183
AccII CGCG 2 cut(s) 107, 1059
AciI CCGC 5 cut(s) 1004, 1025, 1042, 1235, 1713
AclWI GGATC 4 cut(s) 8, 528, 1053, 1762
AcsI RAATTY 2 cut(s) 110, 695
AcuI CTGAAG 3 cut(s) 725, 1320, 1479
AcyI GRCGYC 1 cut(s) 1273
AfaI GTAC 2 cut(s) 821, 902
AfiI CCNNNNNNNGG 1 cut(s) 1751
AflIII ACRYGT 2 cut(s) 918, 1784
AgeI ACCGGT 1 cut(s) 1076
AjiI CACGTC 1 cut(s) 919
AluBI AGCT 9 cut(s) 349, 383, 514, 676, 946, 1168, 1334, 1493, 1499
AluI AGCT 9 cut(s) 349, 383, 514, 676, 946, 1168, 1334, 1493, 1499
Alw21I GWGCWC 2 cut(s) 1076, 1706
Alw26I GTCTC 2 cut(s) 301, 329
AlwI GGATC 4 cut(s) 8, 528, 1053, 1762
Ama87I CYCGRG 1 cut(s) 1178
ApeKI GCWGC 4 cut(s) 383, 386, 725, 1232
ApoI RAATTY 2 cut(s) 110, 695
AsiGI ACCGGT 1 cut(s) 1076
Asp700I GAANNNNTTC 1 cut(s) 699
AspLEI GCGC 3 cut(s) 909, 1061, 1149
AspS9I GGNCC 1 cut(s) 530
AsuHPI GGTGA 1 cut(s) 1749
AsuII TTCGAA 3 cut(s) 59, 1514, 1748
AvaI CYCGRG 1 cut(s) 1178
AvaII GGWCC 1 cut(s) 530
BbsI GAAGAC 5 cut(s) 230, 237, 1335, 1787, 1851
Bbv12I GWGCWC 2 cut(s) 1076, 1706
BbvI GCAGC 4 cut(s) 370, 373, 712, 1244
BccI CCATC 3 cut(s) 40, 268, 1768
BceAI ACGGC 2 cut(s) 1134, 1396
BclI TGATCA 1 cut(s) 1200
BcoDI GTCTC 2 cut(s) 301, 329
BfaI CTAG 4 cut(s) 350, 480, 795, 954
BglII AGATCT 1 cut(s) 367
BisI GCNGC 6 cut(s) 384, 387, 726, 1233, 1236, 1713
BlsI GCNGC 6 cut(s) 385, 388, 727, 1234, 1237, 1714
Bme18I GGWCC 1 cut(s) 530
BmeT110I CYCGRG 1 cut(s) 1178
BmgBI CACGTC 1 cut(s) 919
BmgT120I GGNCC 1 cut(s) 530
BmiI GGNNCC 1 cut(s) 129
BmrI ACTGGG 1 cut(s) 1135
BmsI GCATC 3 cut(s) 456, 1113, 1708
BmuI ACTGGG 1 cut(s) 1135
BpiI GAAGAC 5 cut(s) 230, 237, 1335, 1787, 1851
BpmI CTGGAG 5 cut(s) 278, 443, 698, 775, 1376
Bpu14I TTCGAA 3 cut(s) 59, 1514, 1748
BpuEI CTTGAG 2 cut(s) 144, 392
Bsa29I ATCGAT 1 cut(s) 72
BsaBI GATNNNNATC 4 cut(s) 291, 470, 963, 1759
BsaHI GRCGYC 1 cut(s) 1273
BsaI GGTCTC 1 cut(s) 301
BsaJI CCNNGG 4 cut(s) 18, 486, 580, 1116
BsaWI WCCGGW 1 cut(s) 1076
Bsc4I CCNNNNNNNGG 1 cut(s) 1751
Bse118I RCCGGY 1 cut(s) 1076
Bse1I ACTGG 4 cut(s) 261, 758, 1141, 1247
Bse3DI GCAATG 1 cut(s) 389
Bse8I GATNNNNATC 4 cut(s) 291, 470, 963, 1759
BseCI ATCGAT 1 cut(s) 72
BseDI CCNNGG 4 cut(s) 18, 486, 580, 1116
BseGI GGATG 5 cut(s) 28, 250, 1378, 1537, 1666
BseJI GATNNNNATC 4 cut(s) 291, 470, 963, 1759
BseLI CCNNNNNNNGG 1 cut(s) 1751
BseMI GCAATG 1 cut(s) 389
BseMII CTCAG 3 cut(s) 78, 1340, 1499
BseNI ACTGG 4 cut(s) 261, 758, 1141, 1247
BseRI GAGGAG 2 cut(s) 179, 876
BseXI GCAGC 4 cut(s) 370, 373, 712, 1244
Bsh1236I CGCG 2 cut(s) 107, 1059
BshTI ACCGGT 1 cut(s) 1076
BshVI ATCGAT 1 cut(s) 72
BsiHKAI GWGCWC 2 cut(s) 1076, 1706
BsiHKCI CYCGRG 1 cut(s) 1178
BsiSI CCGG 1 cut(s) 1077
BslFI GGGAC 1 cut(s) 629
BslI CCNNNNNNNGG 1 cut(s) 1751
BsmAI GTCTC 2 cut(s) 301, 329
BsmFI GGGAC 1 cut(s) 629
BsmI GAATGC 1 cut(s) 1238
Bso31I GGTCTC 1 cut(s) 301
BsoBI CYCGRG 1 cut(s) 1178
Bsp119I TTCGAA 3 cut(s) 59, 1514, 1748
Bsp1286I GDGCHC 2 cut(s) 1076, 1706
Bsp1407I TGTACA 2 cut(s) 819, 900
Bsp143I GATC 9 cut(s) 13, 367, 418, 520, 589, 1045, 1200, 1217, 1754
Bsp19I CCATGG 2 cut(s) 18, 580
Bsp68I TCGCGA 1 cut(s) 107
BspACI CCGC 5 cut(s) 1004, 1025, 1042, 1235, 1713
BspCNI CTCAG 3 cut(s) 79, 1341, 1500
BspDI ATCGAT 1 cut(s) 72
BspFNI CGCG 2 cut(s) 107, 1059
BspHI TCATGA 1 cut(s) 1881
BspLI GGNNCC 1 cut(s) 129
BspPI GGATC 4 cut(s) 8, 528, 1053, 1762
BspT104I TTCGAA 3 cut(s) 59, 1514, 1748
BspTNI GGTCTC 1 cut(s) 301
BsrDI GCAATG 1 cut(s) 389
BsrFI RCCGGY 1 cut(s) 1076
BsrGI TGTACA 2 cut(s) 819, 900
BsrI ACTGG 4 cut(s) 261, 758, 1141, 1247
BssAI RCCGGY 1 cut(s) 1076
BssECI CCNNGG 4 cut(s) 18, 486, 580, 1116
BssMI GATC 9 cut(s) 13, 367, 418, 520, 589, 1045, 1200, 1217, 1754
BssNI GRCGYC 1 cut(s) 1273
BssT1I CCWWGG 3 cut(s) 18, 580, 1116
Bst4CI ACNGT 3 cut(s) 236, 1285, 1444
Bst6I CTCTTC 5 cut(s) 218, 327, 399, 554, 1605
BstACI GRCGYC 1 cut(s) 1273
BstAUI TGTACA 2 cut(s) 819, 900
BstBI TTCGAA 3 cut(s) 59, 1514, 1748
BstC8I GCNNGC 2 cut(s) 926, 1057
BstDEI CTNAG 8 cut(s) 87, 296, 379, 539, 1308, 1349, 1467, 1508
BstDSI CCRYGG 2 cut(s) 18, 580
BstF5I GGATG 5 cut(s) 28, 250, 1378, 1537, 1666
BstFNI CGCG 2 cut(s) 107, 1059
BstHHI GCGC 3 cut(s) 909, 1061, 1149
BstKTI GATC 9 cut(s) 16, 370, 421, 523, 592, 1048, 1203, 1220, 1757
BstMAI GTCTC 2 cut(s) 301, 329
BstMBI GATC 9 cut(s) 13, 367, 418, 520, 589, 1045, 1200, 1217, 1754
BstMWI GCNNNNNNNGC 1 cut(s) 1718
BstNSI RCATGY 5 cut(s) 212, 462, 928, 1788, 1852
BstUI CGCG 2 cut(s) 107, 1059
BstV1I GCAGC 4 cut(s) 370, 373, 712, 1244
BstV2I GAAGAC 5 cut(s) 230, 237, 1335, 1787, 1851
BstX2I RGATCY 1 cut(s) 367
BstYI RGATCY 1 cut(s) 367
Bsu15I ATCGAT 1 cut(s) 72
BsuTUI ATCGAT 1 cut(s) 72
BtgI CCRYGG 2 cut(s) 18, 580
BtrI CACGTC 1 cut(s) 919
BtsCI GGATG 5 cut(s) 28, 250, 1378, 1537, 1666
BtsI GCAGTG 3 cut(s) 1203, 1399, 1558
BtsIMutI CAGTG 6 cut(s) 254, 1203, 1210, 1290, 1399, 1558
BtuMI TCGCGA 1 cut(s) 107
Cac8I GCNNGC 2 cut(s) 926, 1057
CciI TCATGA 1 cut(s) 1881
CfoI GCGC 3 cut(s) 909, 1061, 1149
Cfr10I RCCGGY 1 cut(s) 1076
Cfr13I GGNCC 1 cut(s) 530
ClaI ATCGAT 1 cut(s) 72
CseI GACGC 3 cut(s) 1202, 1262, 1329
Csp6I GTAC 2 cut(s) 820, 901
CspAI ACCGGT 1 cut(s) 1076
CviAII CATG 8 cut(s) 19, 209, 459, 581, 925, 1785, 1849, 1882
CviQI GTAC 2 cut(s) 820, 901
DdeI CTNAG 8 cut(s) 87, 296, 379, 539, 1308, 1349, 1467, 1508
DpnI GATC 9 cut(s) 15, 369, 420, 522, 591, 1047, 1202, 1219, 1756
DpnII GATC 9 cut(s) 13, 367, 418, 520, 589, 1045, 1200, 1217, 1754
Eam1104I CTCTTC 5 cut(s) 218, 327, 399, 554, 1605
EarI CTCTTC 5 cut(s) 218, 327, 399, 554, 1605
Eco130I CCWWGG 3 cut(s) 18, 580, 1116
Eco31I GGTCTC 1 cut(s) 301
Eco47I GGWCC 1 cut(s) 530
Eco57I CTGAAG 3 cut(s) 725, 1320, 1479
Eco88I CYCGRG 1 cut(s) 1178
EcoT14I CCWWGG 3 cut(s) 18, 580, 1116
ErhI CCWWGG 3 cut(s) 18, 580, 1116
FaeI CATG 8 cut(s) 22, 212, 462, 584, 928, 1788, 1852, 1885
FalI AAGNNNNNCTT 2 cut(s) 222, 254
FaqI GGGAC 1 cut(s) 629
FatI CATG 8 cut(s) 18, 208, 458, 580, 924, 1784, 1848, 1881
FauI CCCGC 2 cut(s) 1018, 1035
FbaI TGATCA 1 cut(s) 1200
FblI GTMKAC 1 cut(s) 183
Fnu4HI GCNGC 6 cut(s) 384, 387, 726, 1233, 1236, 1713
FokI GGATG 5 cut(s) 35, 237, 1385, 1544, 1673
Fsp4HI GCNGC 6 cut(s) 384, 387, 726, 1233, 1236, 1713
FspBI CTAG 4 cut(s) 350, 480, 795, 954
GlaI GCGC 3 cut(s) 908, 1060, 1148
GluI GCNGC 6 cut(s) 384, 387, 726, 1233, 1236, 1713
GsuI CTGGAG 5 cut(s) 278, 443, 698, 775, 1376
HapII CCGG 1 cut(s) 1077
HgaI GACGC 3 cut(s) 1202, 1262, 1329
HhaI GCGC 3 cut(s) 909, 1061, 1149
Hin1I GRCGYC 1 cut(s) 1273
Hin1II CATG 8 cut(s) 22, 212, 462, 584, 928, 1788, 1852, 1885
Hin6I GCGC 3 cut(s) 907, 1059, 1147
HinP1I GCGC 3 cut(s) 907, 1059, 1147
HincII GTYRAC 2 cut(s) 150, 1767
HindII GTYRAC 2 cut(s) 150, 1767
HindIII AAGCTT 3 cut(s) 512, 1166, 1491
HpaI GTTAAC 1 cut(s) 150
HpaII CCGG 1 cut(s) 1077
HphI GGTGA 1 cut(s) 1749
Hpy166II GTNNAC 4 cut(s) 150, 184, 901, 1767
Hpy188I TCNGA 9 cut(s) 705, 880, 987, 1050, 1214, 1350, 1509, 1738, 1828
Hpy8I GTNNAC 4 cut(s) 150, 184, 901, 1767
Hpy99I CGWCG 1 cut(s) 148
HpyAV CCTTC 6 cut(s) 58, 779, 1354, 1513, 1744, 1755
HpyCH4III ACNGT 3 cut(s) 236, 1285, 1444
HpyCH4IV ACGT 4 cut(s) 146, 918, 972, 1894
HpyF10VI GCNNNNNNNGC 1 cut(s) 1718
HpyF3I CTNAG 8 cut(s) 87, 296, 379, 539, 1308, 1349, 1467, 1508
HpySE526I ACGT 4 cut(s) 146, 918, 972, 1894
Hsp92I GRCGYC 1 cut(s) 1273
Hsp92II CATG 8 cut(s) 22, 212, 462, 584, 928, 1788, 1852, 1885
HspAI GCGC 3 cut(s) 907, 1059, 1147
Ksp22I TGATCA 1 cut(s) 1200
KspAI GTTAAC 1 cut(s) 150
Kzo9I GATC 9 cut(s) 13, 367, 418, 520, 589, 1045, 1200, 1217, 1754
LmnI GCTCC 3 cut(s) 424, 584, 1331
Lsp1109I GCAGC 4 cut(s) 370, 373, 712, 1244
LweI GCATC 3 cut(s) 456, 1113, 1708
MaeI CTAG 4 cut(s) 350, 480, 795, 954
MaeII ACGT 4 cut(s) 146, 918, 972, 1894
MaeIII GTNAC 1 cut(s) 1433
MalI GATC 9 cut(s) 15, 369, 420, 522, 591, 1047, 1202, 1219, 1756
MboI GATC 9 cut(s) 13, 367, 418, 520, 589, 1045, 1200, 1217, 1754
MfeI CAATTG 1 cut(s) 1128
MflI RGATCY 1 cut(s) 367
MhlI GDGCHC 2 cut(s) 1076, 1706
MluCI AATT 4 cut(s) 110, 695, 1128, 1186
MlyI GAGTC 6 cut(s) 331, 875, 1360, 1697, 1762, 1817
MmeI TCCRAC 2 cut(s) 198, 1407
MroXI GAANNNNTTC 1 cut(s) 699
MseI TTAA 5 cut(s) 149, 315, 455, 1415, 1905
MslI CAYNNNNRTG 4 cut(s) 714, 975, 1655, 1886
MspA1I CMGCKG 2 cut(s) 1235, 1715
MspI CCGG 1 cut(s) 1077
MunI CAATTG 1 cut(s) 1128
Mva1269I GAATGC 1 cut(s) 1238
MvnI CGCG 2 cut(s) 107, 1059
MwoI GCNNNNNNNGC 1 cut(s) 1718
NcoI CCATGG 2 cut(s) 18, 580
NdeII GATC 9 cut(s) 13, 367, 418, 520, 589, 1045, 1200, 1217, 1754
NlaIII CATG 8 cut(s) 22, 212, 462, 584, 928, 1788, 1852, 1885
NlaIV GGNNCC 1 cut(s) 129
NmuCI GTSAC 1 cut(s) 1433
NruI TCGCGA 1 cut(s) 107
NspI RCATGY 5 cut(s) 212, 462, 928, 1788, 1852
NspV TTCGAA 3 cut(s) 59, 1514, 1748
PaeI GCATGC 1 cut(s) 928
PaeR7I CTCGAG 1 cut(s) 1178
PagI TCATGA 1 cut(s) 1881
PciI ACATGT 1 cut(s) 1784
PctI GAATGC 1 cut(s) 1238
PdmI GAANNNNTTC 1 cut(s) 699
PfeI GAWTC 7 cut(s) 37, 56, 102, 959, 1376, 1535, 1878
PinAI ACCGGT 1 cut(s) 1076
PkrI GCNGC 6 cut(s) 385, 388, 727, 1234, 1237, 1714
PleI GAGTC 6 cut(s) 331, 875, 1359, 1696, 1762, 1817
PpsI GAGTC 6 cut(s) 331, 875, 1359, 1696, 1762, 1817
PscI ACATGT 1 cut(s) 1784
PspN4I GGNNCC 1 cut(s) 129
PspPI GGNCC 1 cut(s) 530
PspXI VCTCGAGB 1 cut(s) 1178
PsuI RGATCY 1 cut(s) 367
RruI TCGCGA 1 cut(s) 107
RsaI GTAC 2 cut(s) 821, 902
RsaNI GTAC 2 cut(s) 820, 901
RseI CAYNNNNRTG 4 cut(s) 714, 975, 1655, 1886
SaqAI TTAA 5 cut(s) 149, 315, 455, 1415, 1905
SatI GCNGC 6 cut(s) 384, 387, 726, 1233, 1236, 1713
Sau3AI GATC 9 cut(s) 13, 367, 418, 520, 589, 1045, 1200, 1217, 1754
Sau96I GGNCC 1 cut(s) 530
SchI GAGTC 6 cut(s) 331, 875, 1360, 1697, 1762, 1817
SduI GDGCHC 2 cut(s) 1076, 1706
SfaNI GCATC 3 cut(s) 456, 1113, 1708
Sfr274I CTCGAG 1 cut(s) 1178
SfuI TTCGAA 3 cut(s) 59, 1514, 1748
SinI GGWCC 1 cut(s) 530
SlaI CTCGAG 1 cut(s) 1178
SmiMI CAYNNNNRTG 4 cut(s) 714, 975, 1655, 1886
SmlI CTYRAG 3 cut(s) 159, 371, 1178
SmoI CTYRAG 3 cut(s) 159, 371, 1178
SphI GCATGC 1 cut(s) 928
Sse9I AATT 4 cut(s) 110, 695, 1128, 1186
SsiI CCGC 5 cut(s) 1004, 1025, 1042, 1235, 1713
SspMI CTAG 4 cut(s) 350, 480, 795, 954
StyI CCWWGG 3 cut(s) 18, 580, 1116
TaaI ACNGT 3 cut(s) 236, 1285, 1444
TaiI ACGT 4 cut(s) 149, 921, 975, 1897
TasI AATT 4 cut(s) 110, 695, 1128, 1186
TatI WGTACW 2 cut(s) 819, 900
TauI GCSGC 2 cut(s) 1238, 1715
TfiI GAWTC 7 cut(s) 37, 56, 102, 959, 1376, 1535, 1878
Tru1I TTAA 5 cut(s) 149, 315, 455, 1415, 1905
Tru9I TTAA 5 cut(s) 149, 315, 455, 1415, 1905
TscAI CASTG 6 cut(s) 261, 1203, 1210, 1290, 1399, 1558
TseFI GTSAC 1 cut(s) 1433
TseI GCWGC 4 cut(s) 383, 386, 725, 1232
Tsp45I GTSAC 1 cut(s) 1433
TspGWI ACGGA 1 cut(s) 120
TspRI CASTG 6 cut(s) 261, 1203, 1210, 1290, 1399, 1558
VpaK11BI GGWCC 1 cut(s) 530
XapI RAATTY 2 cut(s) 110, 695
XceI RCATGY 5 cut(s) 212, 462, 928, 1788, 1852
XhoI CTCGAG 1 cut(s) 1178
XmiI GTMKAC 1 cut(s) 183
XmnI GAANNNNTTC 1 cut(s) 699
XspI CTAG 4 cut(s) 350, 480, 795, 954
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.