Rh3BG364500

Exosome component 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0004155
Physical Location & Seq
Reverse (-)
44821849 .. 44832457
10609 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG364500.1

Sequence Viewer

Length: 2535 bp
ATGAGCCATGAGTCGACTCCGCCACCGCCGGCGAGGGCCCAATTGCTCCAAAACCTAGCGACAGCCACAGCGAACCTCTCTGGCTCCTCGCGAGTCATACCTTCGGGAGAGGACTTCTACTACTACCGCAATTTCGACGAATTCAAACTCCCAATCGAAGAAATGTCAAAGCAATCTCAGTCCATGCTCGAATCGATTGGGTCGTCGGCAAGCCTCGGGATGGCTTTCCGCAAGGATTTGGATTTGGAGGACGCCTACGATTGGCTGGTCAATGTGAACGACGAGGTCCTGGAGAGGGTGGACGCGTCGGTGGACGAGTTTAAGAGGAGCAGGAGCAGGAACAAGGAGAAGGAAGACGACGAGGGGTTCCAGTTGGTGTGTGGGAAGAAGAAGAAGGGGGATCAGACCTTGTCCAAGGACAACAAGACTAGCAAGCCCAAGGTCTCCTTTCATGTTCCCTCCATTCGCAAGCCTCAGGAGGAGTTTAACATTCTCGTTAACAATTCAAACCAGCCCTTTGAGCATGTTTGGCTCGACACTGGTGACGATGGTCACCGCTTTCTTCATCCCCTGGCAAAGCTCTCAGTTCTTGATTTTATTGACAATGATATTGGGGGGGTTGAGCCTGTAAAACCGCCAGAAATAGAGGCTACCCCATTCAAGCTTGTGGAGGAGGTCAAAGATCTCAAGGAGCTGGCAGCTAAGTTGCGTGGCGTTAATGAATTTGCGGTTGATTTGGAGCACAACCAATATCGATCCTTCCAAGGATTGACTTGTTTGATGCAAATTTCTACAAGAACTGAAGATTTTATAGTAGATACTTTGAAGCTTAGAATTCATATCGGTCCATATCTTAGGGAAGTTTTCAAGGACCCTTCTAAGAGAAAGGTGATGCATGGAGCAGATCGAGATATTGTGTGGCTCCAACGTGATTTTGGCATTTATATCTGCAATTTGTTTGACACCGGCCAGGCCTCAAGGGTATTGAAATTGGAGAGAAATAGTTTGGAATATCTTTTGCATCACTTTTGTGATGTTTCTGCCAACAAAGAATACCAGAATGCAGACTGGAGATTCCGCCCTCTTACCAAAGAGATGGTCAGATATGCCAGAGAAGATACACACTACCTGTTACACATATATGATTTAATGAGAGCGAAGTTATCTTCCATGCCAAAGGAATCTGAAAACTCCGATGCTCCTTTAGTAGAGGTTTACAGGCGCAGTTATGATATATGCATGCATCTCTATGAGAAGGAAGTTTTCACTGAGAATTCCTATCTCCACATATATGGGTTGCAGGGTGCTTGTTTTAATTCTCAGCAGCTTGCCGTTGTTTCTGGTTTATATGAGTGGCGGGATGTTGTTGCTCGTACAGAGGATGAAAGTACTGGCTATATATTACCAAACAAAACTCTACTCGAACTTGCTAAACAGATGCCTGACACAACTAACAAGTTAAGACGATTGGTGAAATCAAAGCATTCATACATTGAGCAGCATCTTTCTTCTGTTGTTAGCGTCATTAGGCACTCTATGCAGAATGCAGCCTTTTTTGAGGCTGCAGCCGAACATCTGAAGGCATCTGAAGAAAATGTGTTGGTCAGTGATCGATCTGAACCCTTACCAGATGAATCTGGATGCAATTCAATTAATGGTGATGTATCTGCACCTTCACCAGCTGCTCCGCCTCATAAAGAGGAGTTTAGAGAGCATGGATGTGGTGCCTCCAATGGAGAAGGAAATGTTGGATTTGAAGTTCATCCTAGAGACAACATTGTTACAGGGAAAAGCAGGAAAGGAAGTAGCATTGGCTGTTCCTTAGAATCTGCAAAGGTTACTGGAGCAACTGTTCAGGTGCAAAAGAAGCCTAGTCGTGCTTTCAGTGCACTCTTGGGGACTGCAGTTCCAAAAAGAAAATTTGATGCTGGTGTAAAGGACAAGGAAGATAATAAGTTGGAGCAGATTAGATCTTCAGTCAATTTCCCATTCCACTCATTCTCAGGTGGGATGGAGCAATCAAATCCCACGATTGAAGAACCAGGAAAAGGTTCTGAAAATCCCCATTCTGAAATGCCCGTTACTGTATCACCTACCAGGCGGAGTTTAGGAGATATTATACCATTAGAAAATGATTCACATGTACCTGAGCACAAGGAGGATAACTCGGTGGCATCTGCTTTAGGCATGGATGGAGAAGATGATCCTATGTCTCTCTCAGAGTTGTCCTCAAGCTTCAAGAAATGCTTTCCGCCGCCTAATCAAAATAGGAAAGCCAGAGAACTGGAGAAATCCCAGGAATCTGGTGGCTTGCAGGTGAAACCTTTTGACTATGAAGCGGCAAGGAGACAGGTCATATTTGGAGAAAAGACAGCCAAGGACGCCAGAGCTGGGGGAGAAGGCATGAAGAGCCTGGGTTCAAGGGCTAAGAAAAAAACTCTAGTTGATGGGGATGATGGGTCAAAAGAGCTACCACAAGGGAGACGACGTCAAGCTTTTCCAGCAACAGGAAATAGAAGTGCAACTTTCCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000175 GO:0000178 GO:0000460 GO:0000785 GO:0000956 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006364 GO:0006396 GO:0006401 GO:0006402 GO:0006403 GO:0006725 GO:0006807 GO:0007549 GO:0008150 GO:0008152 GO:0008298 GO:0008334 GO:0008408 GO:0009048 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0010639 GO:0016070 GO:0016071 GO:0016072 GO:0016075 GO:0016458 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019219 GO:0019222 GO:0019439 GO:0022613 GO:0031047 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032204 GO:0032205 GO:0032210 GO:0032211 GO:0032259 GO:0032268 GO:0032270 GO:0032879 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0035327 GO:0040029 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043632 GO:0043633 GO:0043634 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044728 GO:0045934 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051246 GO:0051247 GO:0051641 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0071025 GO:0071027 GO:0071028 GO:0071029 GO:0071030 GO:0071033 GO:0071034 GO:0071035 GO:0071043 GO:0071044 GO:0071046 GO:0071048 GO:0071704 GO:0071840 GO:0080090 GO:0080188 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1902275 GO:1902464 GO:1902466 GO:1902494 GO:1904356 GO:1904357 GO:1904872 GO:1905269 GO:1905354 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
DNA_pol_A_exo1 HRDC PMC2NT

Protein Analysis

844

Amino Acids

94.79

Weight (kDa)

6.04

Isoelectric Point (pI)

54.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMC2NT PF08066 30 - 108 5.4e-09 PMC2NT (NUC016) domain
DNA_pol_A_exo1 PF01612 223 - 388 6.2e-47 3'-5' exonuclease
HRDC PF00570 442 - 509 9.3e-14 HRDC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2305
AatII GACGTC 1 cut(s) 2491
Acc36I ACCTGC 1 cut(s) 2305
AccB1I GGYRCC 1 cut(s) 1724
AccI GTMKAC 1 cut(s) 14
AccII CGCG 2 cut(s) 91, 305
AclWI GGATC 3 cut(s) 408, 750, 2198
AcoI YGGCCR 1 cut(s) 967
AcsI RAATTY 6 cut(s) 140, 722, 786, 834, 1273, 1919
AcuI CTGAAG 4 cut(s) 822, 1598, 1608, 1959
AcyI GRCGYC 3 cut(s) 252, 2382, 2488
AfaI GTAC 3 cut(s) 1375, 1390, 2145
AfiI CCNNNNNNNGG 6 cut(s) 220, 261, 295, 2048, 2391, 2507
AflIII ACRYGT 2 cut(s) 303, 2140
AjnI CCWGG 7 cut(s) 288, 570, 969, 2041, 2096, 2295, 2412
AjuI GAANNNNNNNTTGG 2 cut(s) 1731, 1763
AleI CACNNNNGTG 1 cut(s) 1029
AloI GAACNNNNNNTCC 4 cut(s) 1743, 1775, 1836, 1868
Alw21I GWGCWC 3 cut(s) 744, 1891, 2154
Alw26I GTCTC 5 cut(s) 448, 1764, 2217, 2341, 2476
Alw44I GTGCAC 1 cut(s) 1887
AlwI GGATC 3 cut(s) 408, 750, 2198
Ama87I CYCGRG 1 cut(s) 215
AoxI GGCC 3 cut(s) 36, 967, 972
ApaI GGGCCC 1 cut(s) 40
ApaLI GTGCAC 1 cut(s) 1887
ApeKI GCWGC 7 cut(s) 698, 1324, 1498, 1547, 1562, 1565, 1682
ApoI RAATTY 6 cut(s) 140, 722, 786, 834, 1273, 1919
ArsI GACNNNNNNTTYG 2 cut(s) 1083, 1115
AseI ATTAAT 1 cut(s) 1653
Asp700I GAANNNNTTC 1 cut(s) 2050
AspLEI GCGC 1 cut(s) 1224
AspS9I GGNCC 5 cut(s) 36, 37, 286, 845, 871
AsuHPI GGTGA 8 cut(s) 545, 554, 901, 1483, 1668, 1670, 2082, 2329
AvaI CYCGRG 1 cut(s) 215
AvaII GGWCC 3 cut(s) 286, 845, 871
AxyI CCTNAGG 1 cut(s) 474
BaeGI GKGCMC 2 cut(s) 40, 1891
BanI GGYRCC 1 cut(s) 1724
BanII GRGCYC 1 cut(s) 40
BbsI GAAGAC 1 cut(s) 360
Bbv12I GWGCWC 3 cut(s) 744, 1891, 2154
BbvI GCAGC 7 cut(s) 710, 1336, 1510, 1549, 1559, 1577, 1669
BccI CCATC 7 cut(s) 214, 542, 1090, 2005, 2186, 2441, 2450
BceAI ACGGC 1 cut(s) 1316
BciT130I CCWGG 7 cut(s) 290, 572, 971, 2043, 2098, 2297, 2414
BcoDI GTCTC 5 cut(s) 448, 1764, 2217, 2341, 2476
BfaI CTAG 5 cut(s) 56, 429, 1767, 1872, 2441
BfmI CTRYAG 2 cut(s) 1563, 1902
BfuAI ACCTGC 1 cut(s) 2305
BglII AGATCT 2 cut(s) 682, 1970
BisI GCNGC 9 cut(s) 699, 1325, 1499, 1548, 1563, 1566, 1683, 2255, 2340
BlsI GCNGC 9 cut(s) 700, 1326, 1500, 1549, 1564, 1567, 1684, 2256, 2341
BmcAI AGTACT 1 cut(s) 1390
Bme1390I CCNGG 7 cut(s) 290, 572, 971, 2043, 2098, 2297, 2414
Bme18I GGWCC 3 cut(s) 286, 845, 871
BmeT110I CYCGRG 1 cut(s) 215
BmgT120I GGNCC 5 cut(s) 36, 37, 286, 845, 871
BmiI GGNNCC 6 cut(s) 38, 85, 368, 873, 923, 1726
BmrFI CCNGG 7 cut(s) 290, 572, 971, 2043, 2098, 2297, 2414
BoxI GACNNNNGTC 1 cut(s) 549
BpiI GAAGAC 1 cut(s) 360
BplI GAGNNNNNCTC 4 cut(s) 2150, 2182, 2213, 2245
BpmI CTGGAG 4 cut(s) 311, 1090, 1863, 2306
Bpu10I CCTNAGC 1 cut(s) 2148
BpuEI CTTGAG 3 cut(s) 671, 961, 2215
Bsa29I ATCGAT 3 cut(s) 194, 754, 1612
BsaHI GRCGYC 3 cut(s) 252, 2382, 2488
BsaI GGTCTC 1 cut(s) 448
BsaJI CCNNGG 8 cut(s) 214, 414, 438, 570, 763, 2295, 2376, 2413
BsaXI ACNNNNNCTCC 4 cut(s) 1836, 1866, 2473, 2503
Bsc4I CCNNNNNNNGG 6 cut(s) 220, 261, 295, 2048, 2391, 2507
Bse118I RCCGGY 2 cut(s) 28, 965
Bse1I ACTGG 6 cut(s) 370, 544, 1073, 1396, 1846, 2289
Bse21I CCTNAGG 1 cut(s) 474
BseBI CCWGG 7 cut(s) 290, 572, 971, 2043, 2098, 2297, 2414
BseCI ATCGAT 3 cut(s) 194, 754, 1612
BseDI CCNNGG 8 cut(s) 214, 414, 438, 570, 763, 2295, 2376, 2413
BseLI CCNNNNNNNGG 6 cut(s) 220, 261, 295, 2048, 2391, 2507
BseMII CTCAG 8 cut(s) 191, 488, 597, 1260, 1334, 2016, 2139, 2232
BseNI ACTGG 6 cut(s) 370, 544, 1073, 1396, 1846, 2289
BseRI GAGGAG 5 cut(s) 76, 340, 494, 686, 1715
BseSI GKGCMC 2 cut(s) 40, 1891
BseXI GCAGC 7 cut(s) 710, 1336, 1510, 1549, 1559, 1577, 1669
BseYI CCCAGC 1 cut(s) 2390
BsgI GTGCAG 1 cut(s) 1653
Bsh1236I CGCG 2 cut(s) 91, 305
BshFI GGCC 3 cut(s) 38, 969, 974
BshNI GGYRCC 1 cut(s) 1724
BshVI ATCGAT 3 cut(s) 194, 754, 1612
BsiHKAI GWGCWC 3 cut(s) 744, 1891, 2154
BsiHKCI CYCGRG 1 cut(s) 215
BsiSI CCGG 2 cut(s) 29, 966
BslFI GGGAC 1 cut(s) 1912
BslI CCNNNNNNNGG 6 cut(s) 220, 261, 295, 2048, 2391, 2507
BsmAI GTCTC 5 cut(s) 448, 1764, 2217, 2341, 2476
BsmBI CGTCTC 1 cut(s) 2476
BsmFI GGGAC 1 cut(s) 1912
BsmI GAATGC 3 cut(s) 1066, 1483, 1549
BsnI GGCC 3 cut(s) 38, 969, 974
Bso31I GGTCTC 1 cut(s) 448
BsoBI CYCGRG 1 cut(s) 215
Bsp120I GGGCCC 1 cut(s) 36
Bsp1286I GDGCHC 4 cut(s) 40, 744, 1891, 2154
Bsp143I GATC 8 cut(s) 400, 682, 755, 904, 1609, 1613, 1970, 2203
Bsp68I TCGCGA 1 cut(s) 91
BspANI GGCC 3 cut(s) 38, 969, 974
BspCNI CTCAG 8 cut(s) 190, 487, 596, 1261, 1333, 2015, 2140, 2231
BspDI ATCGAT 3 cut(s) 194, 754, 1612
BspFNI CGCG 2 cut(s) 91, 305
BspLI GGNNCC 6 cut(s) 38, 85, 368, 873, 923, 1726
BspMAI CTGCAG 2 cut(s) 1567, 1906
BspMI ACCTGC 1 cut(s) 2305
BspPI GGATC 3 cut(s) 408, 750, 2198
BspQI GCTCTTC 1 cut(s) 2402
BspT107I GGYRCC 1 cut(s) 1724
BspTNI GGTCTC 1 cut(s) 448
BsrFI RCCGGY 2 cut(s) 28, 965
BsrI ACTGG 6 cut(s) 370, 544, 1073, 1396, 1846, 2289
BssAI RCCGGY 2 cut(s) 28, 965
BssECI CCNNGG 8 cut(s) 214, 414, 438, 570, 763, 2295, 2376, 2413
BssMI GATC 8 cut(s) 400, 682, 755, 904, 1609, 1613, 1970, 2203
BssNI GRCGYC 3 cut(s) 252, 2382, 2488
BssT1I CCWWGG 4 cut(s) 414, 438, 763, 2376
Bst2UI CCWGG 7 cut(s) 290, 572, 971, 2043, 2098, 2297, 2414
Bst4CI ACNGT 2 cut(s) 1852, 2086
Bst6I CTCTTC 1 cut(s) 2402
BstACI GRCGYC 3 cut(s) 252, 2382, 2488
BstAPI GCANNNNNTGC 1 cut(s) 1537
BstC8I GCNNGC 8 cut(s) 30, 211, 434, 470, 696, 1241, 1329, 2312
BstEII GGTNACC 1 cut(s) 551
BstFNI CGCG 2 cut(s) 91, 305
BstHHI GCGC 1 cut(s) 1224
BstKTI GATC 8 cut(s) 403, 685, 758, 907, 1612, 1616, 1973, 2206
BstMAI GTCTC 5 cut(s) 448, 1764, 2217, 2341, 2476
BstMBI GATC 8 cut(s) 400, 682, 755, 904, 1609, 1613, 1970, 2203
BstMWI GCNNNNNNNGC 8 cut(s) 520, 529, 1537, 1867, 1886, 2381, 2409, 2501
BstNI CCWGG 7 cut(s) 290, 572, 971, 2043, 2098, 2297, 2414
BstNSI RCATGY 3 cut(s) 527, 1243, 2144
BstPAI GACNNNNGTC 1 cut(s) 549
BstPI GGTNACC 1 cut(s) 551
BstSCI CCNGG 7 cut(s) 288, 570, 969, 2041, 2096, 2295, 2412
BstSFI CTRYAG 2 cut(s) 1563, 1902
BstSLI GKGCMC 2 cut(s) 40, 1891
BstUI CGCG 2 cut(s) 91, 305
BstV1I GCAGC 7 cut(s) 710, 1336, 1510, 1549, 1559, 1577, 1669
BstV2I GAAGAC 1 cut(s) 360
BstX2I RGATCY 2 cut(s) 682, 1970
BstXI CCANNNNNNTGG 4 cut(s) 1096, 1292, 2284, 2303
BstYI RGATCY 2 cut(s) 682, 1970
Bsu15I ATCGAT 3 cut(s) 194, 754, 1612
Bsu36I CCTNAGG 1 cut(s) 474
BsuRI GGCC 3 cut(s) 38, 969, 974
BsuTUI ATCGAT 3 cut(s) 194, 754, 1612
BtsIMutI CAGTG 4 cut(s) 537, 1266, 1612, 1891
BtuMI TCGCGA 1 cut(s) 91
BveI ACCTGC 1 cut(s) 2305
Cac8I GCNNGC 8 cut(s) 30, 211, 434, 470, 696, 1241, 1329, 2312
CfoI GCGC 1 cut(s) 1224
Cfr10I RCCGGY 2 cut(s) 28, 965
Cfr13I GGNCC 5 cut(s) 36, 37, 286, 845, 871
ClaI ATCGAT 3 cut(s) 194, 754, 1612
CseI GACGC 5 cut(s) 260, 294, 311, 1510, 2390
Csp6I GTAC 3 cut(s) 1374, 1389, 2144
CviQI GTAC 3 cut(s) 1374, 1389, 2144
DpnI GATC 8 cut(s) 402, 684, 757, 906, 1611, 1615, 1972, 2205
DpnII GATC 8 cut(s) 400, 682, 755, 904, 1609, 1613, 1970, 2203
EaeI YGGCCR 1 cut(s) 967
Eam1104I CTCTTC 1 cut(s) 2402
EarI CTCTTC 1 cut(s) 2402
EciI GGCGGA 5 cut(s) 9, 1067, 1677, 2116, 2241
Eco130I CCWWGG 4 cut(s) 414, 438, 763, 2376
Eco147I AGGCCT 1 cut(s) 974
Eco24I GRGCYC 1 cut(s) 40
Eco31I GGTCTC 1 cut(s) 448
Eco47I GGWCC 3 cut(s) 286, 845, 871
Eco57I CTGAAG 4 cut(s) 822, 1598, 1608, 1959
Eco81I CCTNAGG 1 cut(s) 474
Eco88I CYCGRG 1 cut(s) 215
Eco91I GGTNACC 1 cut(s) 551
EcoO109I RGGNCCY 3 cut(s) 36, 286, 871
EcoO65I GGTNACC 1 cut(s) 551
EcoRI GAATTC 3 cut(s) 140, 834, 1273
EcoRII CCWGG 7 cut(s) 288, 570, 969, 2041, 2096, 2295, 2412
EcoT14I CCWWGG 4 cut(s) 414, 438, 763, 2376
EcoT22I ATGCAT 3 cut(s) 897, 1241, 1245
EcoT38I GRGCYC 1 cut(s) 40
ErhI CCWWGG 4 cut(s) 414, 438, 763, 2376
Esp3I CGTCTC 1 cut(s) 2476
FalI AAGNNNNNCTT 5 cut(s) 431, 463, 2231, 2263, 2509
FaqI GGGAC 1 cut(s) 1912
FauI CCCGC 1 cut(s) 1350
FblI GTMKAC 1 cut(s) 14
Fnu4HI GCNGC 9 cut(s) 699, 1325, 1499, 1548, 1563, 1566, 1683, 2255, 2340
FriOI GRGCYC 1 cut(s) 40
Fsp4HI GCNGC 9 cut(s) 699, 1325, 1499, 1548, 1563, 1566, 1683, 2255, 2340
FspBI CTAG 5 cut(s) 56, 429, 1767, 1872, 2441
GlaI GCGC 1 cut(s) 1223
GluI GCNGC 9 cut(s) 699, 1325, 1499, 1548, 1563, 1566, 1683, 2255, 2340
GsaI CCCAGC 1 cut(s) 2394
GsuI CTGGAG 4 cut(s) 311, 1090, 1863, 2306
HaeIII GGCC 3 cut(s) 38, 969, 974
HapII CCGG 2 cut(s) 29, 966
HgaI GACGC 5 cut(s) 260, 294, 311, 1510, 2390
HhaI GCGC 1 cut(s) 1224
Hin1I GRCGYC 3 cut(s) 252, 2382, 2488
Hin6I GCGC 1 cut(s) 1222
HinP1I GCGC 1 cut(s) 1222
HincII GTYRAC 2 cut(s) 15, 499
HindII GTYRAC 2 cut(s) 15, 499
HindIII AAGCTT 4 cut(s) 662, 827, 2233, 2493
HpaI GTTAAC 1 cut(s) 499
HpaII CCGG 2 cut(s) 29, 966
HphI GGTGA 8 cut(s) 545, 554, 901, 1483, 1668, 1670, 2082, 2329
Hpy166II GTNNAC 7 cut(s) 15, 277, 301, 313, 499, 1216, 1889
Hpy188III TCNNGA 8 cut(s) 90, 105, 217, 476, 590, 908, 1638, 2239
Hpy8I GTNNAC 7 cut(s) 15, 277, 301, 313, 499, 1216, 1889
Hpy99I CGWCG 6 cut(s) 140, 208, 284, 310, 362, 2490
HpyCH4III ACNGT 2 cut(s) 1852, 2086
HpyCH4IV ACGT 2 cut(s) 928, 2488
HpyF10VI GCNNNNNNNGC 8 cut(s) 520, 529, 1537, 1867, 1886, 2381, 2409, 2501
HpySE526I ACGT 2 cut(s) 928, 2488
Hsp92I GRCGYC 3 cut(s) 252, 2382, 2488
HspAI GCGC 1 cut(s) 1222
KroI GCCGGC 1 cut(s) 28
KroNI GCCGGC 1 cut(s) 30
KspAI GTTAAC 1 cut(s) 499
Kzo9I GATC 8 cut(s) 400, 682, 755, 904, 1609, 1613, 1970, 2203
LguI GCTCTTC 1 cut(s) 2402
Lsp1109I GCAGC 7 cut(s) 710, 1336, 1510, 1549, 1559, 1577, 1669
MaeI CTAG 5 cut(s) 56, 429, 1767, 1872, 2441
MaeII ACGT 2 cut(s) 928, 2488
MaeIII GTNAC 6 cut(s) 542, 551, 1131, 1780, 1837, 2080
MalI GATC 8 cut(s) 402, 684, 757, 906, 1611, 1615, 1972, 2205
MboI GATC 8 cut(s) 400, 682, 755, 904, 1609, 1613, 1970, 2203
MfeI CAATTG 1 cut(s) 41
MflI RGATCY 2 cut(s) 682, 1970
MhlI GDGCHC 4 cut(s) 40, 744, 1891, 2154
MluI ACGCGT 1 cut(s) 303
MlyI GAGTC 3 cut(s) 10, 20, 102
MmeI TCCRAC 3 cut(s) 949, 1729, 1938
Mph1103I ATGCAT 3 cut(s) 897, 1241, 1245
MreI CGCCGGCG 1 cut(s) 28
MroNI GCCGGC 1 cut(s) 28
MroXI GAANNNNTTC 1 cut(s) 2050
MseI TTAA 9 cut(s) 321, 486, 498, 717, 1148, 1314, 1460, 1653, 2533
MslI CAYNNNNRTG 5 cut(s) 1029, 1140, 1248, 1290, 1719
MspA1I CMGCKG 1 cut(s) 1682
MspI CCGG 2 cut(s) 29, 966
MspR9I CCNGG 7 cut(s) 290, 572, 971, 2043, 2098, 2297, 2414
MunI CAATTG 1 cut(s) 41
Mva1269I GAATGC 3 cut(s) 1066, 1483, 1549
MvaI CCWGG 7 cut(s) 290, 572, 971, 2043, 2098, 2297, 2414
MvnI CGCG 2 cut(s) 91, 305
MwoI GCNNNNNNNGC 8 cut(s) 520, 529, 1537, 1867, 1886, 2381, 2409, 2501
NaeI GCCGGC 1 cut(s) 30
NdeII GATC 8 cut(s) 400, 682, 755, 904, 1609, 1613, 1970, 2203
NgoMIV GCCGGC 1 cut(s) 28
NlaIV GGNNCC 6 cut(s) 38, 85, 368, 873, 923, 1726
NmuCI GTSAC 2 cut(s) 542, 551
NruI TCGCGA 1 cut(s) 91
NsiI ATGCAT 3 cut(s) 897, 1241, 1245
NspI RCATGY 3 cut(s) 527, 1243, 2144
OliI CACNNNNGTG 1 cut(s) 1029
PaeI GCATGC 1 cut(s) 1243
PaqCI CACCTGC 1 cut(s) 2305
PceI AGGCCT 1 cut(s) 974
PciI ACATGT 1 cut(s) 2140
PciSI GCTCTTC 1 cut(s) 2402
PcsI WCGNNNNNNNCGW 1 cut(s) 200
PctI GAATGC 3 cut(s) 1066, 1483, 1549
PdiI GCCGGC 1 cut(s) 30
PdmI GAANNNNTTC 1 cut(s) 2050
PfeI GAWTC 7 cut(s) 191, 1074, 1181, 1634, 1826, 2135, 2300
PflFI GACNNNGTC 3 cut(s) 284, 409, 2487
PfoI TCCNGGA 1 cut(s) 288
PkrI GCNGC 9 cut(s) 700, 1326, 1500, 1549, 1564, 1567, 1684, 2256, 2341
PleI GAGTC 3 cut(s) 10, 19, 101
PpsI GAGTC 3 cut(s) 10, 19, 101
PpuMI RGGWCCY 2 cut(s) 286, 871
PscI ACATGT 1 cut(s) 2140
PshAI GACNNNNGTC 1 cut(s) 549
PshBI ATTAAT 1 cut(s) 1653
Psp5II RGGWCCY 2 cut(s) 286, 871
Psp6I CCWGG 7 cut(s) 288, 570, 969, 2041, 2096, 2295, 2412
PspEI GGTNACC 1 cut(s) 551
PspFI CCCAGC 1 cut(s) 2390
PspGI CCWGG 7 cut(s) 288, 570, 969, 2041, 2096, 2295, 2412
PspN4I GGNNCC 6 cut(s) 38, 85, 368, 873, 923, 1726
PspOMI GGGCCC 1 cut(s) 36
PspPI GGNCC 5 cut(s) 36, 37, 286, 845, 871
PspPPI RGGWCCY 2 cut(s) 286, 871
PstI CTGCAG 2 cut(s) 1567, 1906
PsuI RGATCY 2 cut(s) 682, 1970
PsyI GACNNNGTC 3 cut(s) 284, 409, 2487
PvuII CAGCTG 1 cut(s) 1682
RruI TCGCGA 1 cut(s) 91
RsaI GTAC 3 cut(s) 1375, 1390, 2145
RsaNI GTAC 3 cut(s) 1374, 1389, 2144
RseI CAYNNNNRTG 5 cut(s) 1029, 1140, 1248, 1290, 1719
SalI GTCGAC 1 cut(s) 13
SapI GCTCTTC 1 cut(s) 2402
SaqAI TTAA 9 cut(s) 321, 486, 498, 717, 1148, 1314, 1460, 1653, 2533
SatI GCNGC 9 cut(s) 699, 1325, 1499, 1548, 1563, 1566, 1683, 2255, 2340
Sau3AI GATC 8 cut(s) 400, 682, 755, 904, 1609, 1613, 1970, 2203
Sau96I GGNCC 5 cut(s) 36, 37, 286, 845, 871
ScaI AGTACT 1 cut(s) 1390
SchI GAGTC 3 cut(s) 10, 20, 102
ScrFI CCNGG 7 cut(s) 290, 572, 971, 2043, 2098, 2297, 2414
SduI GDGCHC 4 cut(s) 40, 744, 1891, 2154
SfcI CTRYAG 2 cut(s) 1563, 1902
SgrAI CRCCGGYG 1 cut(s) 28
SinI GGWCC 3 cut(s) 286, 845, 871
SmiMI CAYNNNNRTG 5 cut(s) 1029, 1140, 1248, 1290, 1719
SmlI CTYRAG 3 cut(s) 686, 976, 2230
SmoI CTYRAG 3 cut(s) 686, 976, 2230
SphI GCATGC 1 cut(s) 1243
SseBI AGGCCT 1 cut(s) 974
SspMI CTAG 5 cut(s) 56, 429, 1767, 1872, 2441
StuI AGGCCT 1 cut(s) 974
StyD4I CCNGG 7 cut(s) 288, 570, 969, 2041, 2096, 2295, 2412
StyI CCWWGG 4 cut(s) 414, 438, 763, 2376
TaaI ACNGT 2 cut(s) 1852, 2086
TaiI ACGT 2 cut(s) 931, 2491
TaqII GACCGA 1 cut(s) 833
TatI WGTACW 1 cut(s) 1388
TauI GCSGC 2 cut(s) 2257, 2342
TfiI GAWTC 7 cut(s) 191, 1074, 1181, 1634, 1826, 2135, 2300
Tru1I TTAA 9 cut(s) 321, 486, 498, 717, 1148, 1314, 1460, 1653, 2533
Tru9I TTAA 9 cut(s) 321, 486, 498, 717, 1148, 1314, 1460, 1653, 2533
TscAI CASTG 4 cut(s) 544, 1273, 1612, 1891
TseFI GTSAC 2 cut(s) 542, 551
TseI GCWGC 7 cut(s) 698, 1324, 1498, 1547, 1562, 1565, 1682
Tsp45I GTSAC 2 cut(s) 542, 551
TspGWI ACGGA 1 cut(s) 2519
TspRI CASTG 4 cut(s) 544, 1273, 1612, 1891
Tth111I GACNNNGTC 3 cut(s) 284, 409, 2487
VneI GTGCAC 1 cut(s) 1887
VpaK11BI GGWCC 3 cut(s) 286, 845, 871
VspI ATTAAT 1 cut(s) 1653
XapI RAATTY 6 cut(s) 140, 722, 786, 834, 1273, 1919
XceI RCATGY 3 cut(s) 527, 1243, 2144
XcmI CCANNNNNNNNNTGG 3 cut(s) 377, 932, 2303
XmiI GTMKAC 1 cut(s) 14
XmnI GAANNNNTTC 1 cut(s) 2050
XspI CTAG 5 cut(s) 56, 429, 1767, 1872, 2441
ZraI GACGTC 1 cut(s) 2489
ZrmI AGTACT 1 cut(s) 1390
Zsp2I ATGCAT 3 cut(s) 897, 1241, 1245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.