RchiOBHm_Chr3g0496321

Exosome component 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0004155
Physical Location & Seq
Reverse (-)
47061601 .. 47067161
5561 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ45866

Sequence Viewer

Length: 1572 bp
ATGAGCCATGAGCCGACTCCGCCACCGCCGGCGAGGGCCCAATTGCTCCAAAACCTAGCGACAGCCACAGCCAACCTGTCTGGCTCCTCGCGAGTCATACCTTCGGGAGAGGACTTCTACTACTACCGCAATTTCGACGAATTCAAACTGCCAATCGAAGAAATTGCAAAGCAATCTCAGTCCATGCTCGAATCGATTGGGTCGTCGGCAAGCCTCGGGATGGCTTTCCCCAAGGATTTGGATTTGGAGGACGCCTACGATTGGCTGGTCAATGTGAACGACGAGGTCCTCGAGAGGGTGGACGCGTCGGTGGACGAGTTTAAGAGGAGCAGGAACAAGGAGAAGGAAGACGACGAGGGGTTCCAGTTGGTGTGTGGGAAGAAGAAGAAGGGGGATCAGACCTTGTCCAAGGACAACAAGACTAGCAAGCCCAAGGTCTCGTTTCATGTTCCCTCCATTCGCAAGCCTCAGGAGGAGTTTAACATTCTCGTTAACAATTCAAACCAGCCCTTTGAGCATGTTTGGCTCGGCACTGGTGACGATGGTCACCGCTTTCTTCATCCCCTGGAAAAGCTCTCAATTCTTGATTTTATTGACGATGATATTGGGGGGGTTGAGCCTGTAAAACCGCCAGAAATAGAGGCTACCCCATTCAAGCTTGTGGAGGAGGTCAAAGATCTCAAGGAGCTGGCAGCTAAGTTGCGCGGCGTTAATGAATTTGCGGTTGATTTGGAGCACAACCAATATCGATCCTTCCAAGGATTGACTTGTTTGATGCAAATTTCTACAAGAACTGAAGATTTTATACTAGATACTTTGAAGCTTAGAATTCATATCGGTCCATATCTTAGGGAAGTTTTCAAGGACCCTTCTAAGAGAAAGGTGATGCATGGAGCAGATCGAGATATTGTGTGGCTCCAACGTGATTTTGGCATTTATATCTGCAATTTGTTTGACACTGGCCAGGCCTCAAGGGTATTGAAATTGGAGAGAAATAGTTTGGAATATCTTTTGCATCACTTTTGTGATGTTTCTGCCAACAAAGAATACCAGAATGCAGACTGGAGATTCCGCCCTCTTACCAAAGAGATGGTCAGATATGCCAGAGAAGATACACACTACCTGTTACACATATATGATTTAATGAGAGCGAAGTTATCTTCCATGCCAAAGGAATCTGAAAATTCCGATGCTCCTTTAGTAGAGGTTTACAGGCGCAGTTATGATATATGCATGCATCTCTATGCGAAGGAAGTTTTCACTGAGAATTCCTATCTCCACATATATGGGTTGCAGGGTGCTTGTTTTAATTCTCAGCAGCTTGCCGTTGTTTCCGGTTTATATGAGTGGCGGGATGTTGTTGCTCGTACAGAGGATGAAAGTACTGGCTATATATTACCAAACAAAACTCTACTCGAACTTGCTAAACAGATGCCTGACACAACTAACAAGTTAAGACGATTGGTGAAATCAAAGCATTCATACATTGAGCAGCATCTTTCTTCTGTTGTTAGCGTCATTAGGCACTCTATGCAGAATGCTGCCTTTTTGAGGCTGCAGCCGAACATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000175 GO:0000178 GO:0000460 GO:0000785 GO:0000956 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006364 GO:0006396 GO:0006401 GO:0006402 GO:0006403 GO:0006725 GO:0006807 GO:0007549 GO:0008150 GO:0008152 GO:0008298 GO:0008334 GO:0008408 GO:0009048 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0010639 GO:0016070 GO:0016071 GO:0016072 GO:0016075 GO:0016458 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019219 GO:0019222 GO:0019439 GO:0022613 GO:0031047 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032204 GO:0032205 GO:0032210 GO:0032211 GO:0032259 GO:0032268 GO:0032270 GO:0032879 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0035327 GO:0040029 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043632 GO:0043633 GO:0043634 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044728 GO:0045934 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051246 GO:0051247 GO:0051641 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0071025 GO:0071027 GO:0071028 GO:0071029 GO:0071030 GO:0071033 GO:0071034 GO:0071035 GO:0071043 GO:0071044 GO:0071046 GO:0071048 GO:0071704 GO:0071840 GO:0080090 GO:0080188 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1902275 GO:1902464 GO:1902466 GO:1902494 GO:1904356 GO:1904357 GO:1904872 GO:1905269 GO:1905354 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
DNA_pol_A_exo1 HRDC PMC2NT

Protein Analysis

523

Amino Acids

60.27

Weight (kDa)

5.84

Isoelectric Point (pI)

54.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMC2NT PF08066 30 - 108 5e-09 PMC2NT (NUC016) domain
DNA_pol_A_exo1 PF01612 221 - 386 3.7e-47 3'-5' exonuclease
HRDC PF00570 440 - 507 4.9e-14 HRDC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 3 cut(s) 91, 305, 705
AciI CCGC 9 cut(s) 20, 26, 127, 550, 629, 705, 722, 1072, 1351
AclWI GGATC 2 cut(s) 402, 744
AcoI YGGCCR 1 cut(s) 961
AcsI RAATTY 6 cut(s) 140, 716, 780, 828, 1183, 1267
AcuI CTGAAG 1 cut(s) 816
AcyI GRCGYC 1 cut(s) 252
AfaI GTAC 2 cut(s) 1369, 1384
AfiI CCNNNNNNNGG 4 cut(s) 220, 261, 295, 1551
AflIII ACRYGT 1 cut(s) 303
AgsI TTSAA 6 cut(s) 145, 501, 655, 820, 862, 982
AjnI CCWGG 2 cut(s) 564, 963
AleI CACNNNNGTG 1 cut(s) 1023
AluBI AGCT 6 cut(s) 574, 658, 688, 695, 823, 1321
AluI AGCT 6 cut(s) 574, 658, 688, 695, 823, 1321
Alw21I GWGCWC 1 cut(s) 738
Alw26I GTCTC 1 cut(s) 442
AlwI GGATC 2 cut(s) 402, 744
Ama87I CYCGRG 2 cut(s) 215, 290
AoxI GGCC 3 cut(s) 36, 961, 966
ApaI GGGCCC 1 cut(s) 40
ApeKI GCWGC 6 cut(s) 692, 1318, 1492, 1541, 1555, 1558
ApoI RAATTY 6 cut(s) 140, 716, 780, 828, 1183, 1267
ArsI GACNNNNNNTTYG 2 cut(s) 1077, 1109
AspLEI GCGC 2 cut(s) 705, 1218
AspS9I GGNCC 5 cut(s) 36, 37, 286, 839, 865
AsuHPI GGTGA 4 cut(s) 539, 548, 895, 1477
AvaI CYCGRG 2 cut(s) 215, 290
AvaII GGWCC 3 cut(s) 286, 839, 865
AxyI CCTNAGG 1 cut(s) 468
BaeGI GKGCMC 1 cut(s) 40
BalI TGGCCA 1 cut(s) 963
BanII GRGCYC 1 cut(s) 40
BarI GAAGNNNNNNTAC 2 cut(s) 789, 821
BbsI GAAGAC 1 cut(s) 354
Bbv12I GWGCWC 1 cut(s) 738
BbvI GCAGC 5 cut(s) 704, 1330, 1504, 1528, 1542
BccI CCATC 3 cut(s) 214, 536, 1084
BceAI ACGGC 1 cut(s) 1310
BcgI CGANNNNNNTGC 2 cut(s) 146, 180
BciT130I CCWGG 2 cut(s) 566, 965
BcoDI GTCTC 1 cut(s) 442
BfaI CTAG 3 cut(s) 56, 423, 809
BfmI CTRYAG 1 cut(s) 1556
BglII AGATCT 1 cut(s) 676
BisI GCNGC 7 cut(s) 693, 706, 1319, 1493, 1542, 1556, 1559
BlsI GCNGC 7 cut(s) 694, 707, 1320, 1494, 1543, 1557, 1560
BmcAI AGTACT 1 cut(s) 1384
Bme1390I CCNGG 2 cut(s) 566, 965
Bme18I GGWCC 3 cut(s) 286, 839, 865
BmeT110I CYCGRG 2 cut(s) 215, 290
BmgT120I GGNCC 5 cut(s) 36, 37, 286, 839, 865
BmiI GGNNCC 5 cut(s) 38, 85, 362, 867, 917
BmrFI CCNGG 2 cut(s) 566, 965
BmsI GCATC 7 cut(s) 765, 876, 1024, 1180, 1246, 1422, 1504
BoxI GACNNNNGTC 1 cut(s) 543
BpiI GAAGAC 1 cut(s) 354
BpmI CTGGAG 1 cut(s) 1084
BpuEI CTTGAG 2 cut(s) 665, 955
Bsa29I ATCGAT 2 cut(s) 194, 748
BsaHI GRCGYC 1 cut(s) 252
BsaI GGTCTC 1 cut(s) 442
BsaJI CCNNGG 6 cut(s) 214, 231, 408, 432, 564, 757
BsaWI WCCGGW 1 cut(s) 1334
Bsc4I CCNNNNNNNGG 4 cut(s) 220, 261, 295, 1551
Bse118I RCCGGY 1 cut(s) 28
Bse1I ACTGG 5 cut(s) 364, 538, 964, 1067, 1390
Bse21I CCTNAGG 1 cut(s) 468
BseBI CCWGG 2 cut(s) 566, 965
BseCI ATCGAT 2 cut(s) 194, 748
BseDI CCNNGG 6 cut(s) 214, 231, 408, 432, 564, 757
BseGI GGATG 4 cut(s) 225, 559, 1360, 1381
BseLI CCNNNNNNNGG 4 cut(s) 220, 261, 295, 1551
BseMII CTCAG 4 cut(s) 191, 482, 1254, 1328
BseNI ACTGG 5 cut(s) 364, 538, 964, 1067, 1390
BseRI GAGGAG 4 cut(s) 76, 340, 488, 680
BseSI GKGCMC 1 cut(s) 40
BseXI GCAGC 5 cut(s) 704, 1330, 1504, 1528, 1542
Bsh1236I CGCG 3 cut(s) 91, 305, 705
BshFI GGCC 3 cut(s) 38, 963, 968
BshVI ATCGAT 2 cut(s) 194, 748
BsiHKAI GWGCWC 1 cut(s) 738
BsiHKCI CYCGRG 2 cut(s) 215, 290
BsiSI CCGG 2 cut(s) 29, 1335
BslI CCNNNNNNNGG 4 cut(s) 220, 261, 295, 1551
BsmAI GTCTC 1 cut(s) 442
BsmI GAATGC 3 cut(s) 1060, 1477, 1543
BsnI GGCC 3 cut(s) 38, 963, 968
Bso31I GGTCTC 1 cut(s) 442
BsoBI CYCGRG 2 cut(s) 215, 290
Bsp120I GGGCCC 1 cut(s) 36
Bsp1286I GDGCHC 2 cut(s) 40, 738
Bsp143I GATC 4 cut(s) 394, 676, 749, 898
Bsp68I TCGCGA 1 cut(s) 91
BspACI CCGC 9 cut(s) 20, 26, 127, 550, 629, 705, 722, 1072, 1351
BspANI GGCC 3 cut(s) 38, 963, 968
BspCNI CTCAG 4 cut(s) 190, 481, 1255, 1327
BspDI ATCGAT 2 cut(s) 194, 748
BspFNI CGCG 3 cut(s) 91, 305, 705
BspLI GGNNCC 5 cut(s) 38, 85, 362, 867, 917
BspMAI CTGCAG 1 cut(s) 1560
BspPI GGATC 2 cut(s) 402, 744
BspTNI GGTCTC 1 cut(s) 442
BsrFI RCCGGY 1 cut(s) 28
BsrI ACTGG 5 cut(s) 364, 538, 964, 1067, 1390
BssAI RCCGGY 1 cut(s) 28
BssECI CCNNGG 6 cut(s) 214, 231, 408, 432, 564, 757
BssMI GATC 4 cut(s) 394, 676, 749, 898
BssNI GRCGYC 1 cut(s) 252
BssT1I CCWWGG 4 cut(s) 231, 408, 432, 757
Bst2UI CCWGG 2 cut(s) 566, 965
BstACI GRCGYC 1 cut(s) 252
BstAPI GCANNNNNTGC 1 cut(s) 1531
BstC8I GCNNGC 7 cut(s) 30, 211, 428, 464, 690, 1235, 1323
BstDEI CTNAG 8 cut(s) 177, 468, 696, 824, 848, 873, 1263, 1314
BstEII GGTNACC 1 cut(s) 545
BstENI CCTNNNNNAGG 1 cut(s) 1549
BstF5I GGATG 4 cut(s) 225, 559, 1360, 1381
BstFNI CGCG 3 cut(s) 91, 305, 705
BstHHI GCGC 2 cut(s) 705, 1218
BstKTI GATC 4 cut(s) 397, 679, 752, 901
BstMAI GTCTC 1 cut(s) 442
BstMBI GATC 4 cut(s) 394, 676, 749, 898
BstMWI GCNNNNNNNGC 4 cut(s) 19, 514, 523, 1531
BstNI CCWGG 2 cut(s) 566, 965
BstNSI RCATGY 2 cut(s) 521, 1237
BstPAI GACNNNNGTC 1 cut(s) 543
BstPI GGTNACC 1 cut(s) 545
BstSCI CCNGG 2 cut(s) 564, 963
BstSFI CTRYAG 1 cut(s) 1556
BstSLI GKGCMC 1 cut(s) 40
BstUI CGCG 3 cut(s) 91, 305, 705
BstV1I GCAGC 5 cut(s) 704, 1330, 1504, 1528, 1542
BstV2I GAAGAC 1 cut(s) 354
BstX2I RGATCY 1 cut(s) 676
BstXI CCANNNNNNTGG 3 cut(s) 238, 1090, 1286
BstYI RGATCY 1 cut(s) 676
Bsu15I ATCGAT 2 cut(s) 194, 748
Bsu36I CCTNAGG 1 cut(s) 468
BsuRI GGCC 3 cut(s) 38, 963, 968
BsuTUI ATCGAT 2 cut(s) 194, 748
BtsCI GGATG 4 cut(s) 225, 559, 1360, 1381
BtsIMutI CAGTG 3 cut(s) 531, 957, 1260
BtuMI TCGCGA 1 cut(s) 91
Cac8I GCNNGC 7 cut(s) 30, 211, 428, 464, 690, 1235, 1323
CfoI GCGC 2 cut(s) 705, 1218
Cfr10I RCCGGY 1 cut(s) 28
Cfr13I GGNCC 5 cut(s) 36, 37, 286, 839, 865
ClaI ATCGAT 2 cut(s) 194, 748
CseI GACGC 4 cut(s) 260, 294, 311, 1504
Csp6I GTAC 2 cut(s) 1368, 1383
CviAII CATG 7 cut(s) 8, 184, 446, 518, 890, 1165, 1234
CviQI GTAC 2 cut(s) 1368, 1383
DdeI CTNAG 8 cut(s) 177, 468, 696, 824, 848, 873, 1263, 1314
DpnI GATC 4 cut(s) 396, 678, 751, 900
DpnII GATC 4 cut(s) 394, 676, 749, 898
EaeI YGGCCR 1 cut(s) 961
EciI GGCGGA 2 cut(s) 9, 1061
Eco130I CCWWGG 4 cut(s) 231, 408, 432, 757
Eco147I AGGCCT 1 cut(s) 968
Eco24I GRGCYC 1 cut(s) 40
Eco31I GGTCTC 1 cut(s) 442
Eco47I GGWCC 3 cut(s) 286, 839, 865
Eco57I CTGAAG 1 cut(s) 816
Eco81I CCTNAGG 1 cut(s) 468
Eco88I CYCGRG 2 cut(s) 215, 290
Eco91I GGTNACC 1 cut(s) 545
EcoNI CCTNNNNNAGG 1 cut(s) 1549
EcoO109I RGGNCCY 3 cut(s) 36, 286, 865
EcoO65I GGTNACC 1 cut(s) 545
EcoRI GAATTC 3 cut(s) 140, 828, 1267
EcoRII CCWGG 2 cut(s) 564, 963
EcoT14I CCWWGG 4 cut(s) 231, 408, 432, 757
EcoT22I ATGCAT 3 cut(s) 891, 1235, 1239
EcoT38I GRGCYC 1 cut(s) 40
ErhI CCWWGG 4 cut(s) 231, 408, 432, 757
FaeI CATG 7 cut(s) 11, 187, 449, 521, 893, 1168, 1237
FatI CATG 7 cut(s) 7, 183, 445, 517, 889, 1164, 1233
FauI CCCGC 1 cut(s) 1344
Fnu4HI GCNGC 7 cut(s) 693, 706, 1319, 1493, 1542, 1556, 1559
FokI GGATG 4 cut(s) 232, 546, 1367, 1388
FriOI GRGCYC 1 cut(s) 40
Fsp4HI GCNGC 7 cut(s) 693, 706, 1319, 1493, 1542, 1556, 1559
FspBI CTAG 3 cut(s) 56, 423, 809
GlaI GCGC 2 cut(s) 704, 1217
GluI GCNGC 7 cut(s) 693, 706, 1319, 1493, 1542, 1556, 1559
GsuI CTGGAG 1 cut(s) 1084
HaeIII GGCC 3 cut(s) 38, 963, 968
HapII CCGG 2 cut(s) 29, 1335
HgaI GACGC 4 cut(s) 260, 294, 311, 1504
HhaI GCGC 2 cut(s) 705, 1218
Hin1I GRCGYC 1 cut(s) 252
Hin1II CATG 7 cut(s) 11, 187, 449, 521, 893, 1168, 1237
Hin6I GCGC 2 cut(s) 703, 1216
HinP1I GCGC 2 cut(s) 703, 1216
HincII GTYRAC 1 cut(s) 493
HindII GTYRAC 1 cut(s) 493
HindIII AAGCTT 2 cut(s) 656, 821
HinfI GANTC 5 cut(s) 16, 93, 191, 1068, 1175
HpaI GTTAAC 1 cut(s) 493
HpaII CCGG 2 cut(s) 29, 1335
HphI GGTGA 4 cut(s) 539, 548, 895, 1477
Hpy166II GTNNAC 5 cut(s) 277, 301, 313, 493, 1210
Hpy188I TCNGA 5 cut(s) 399, 1097, 1180, 1189, 1571
Hpy188III TCNNGA 7 cut(s) 90, 105, 217, 292, 470, 584, 902
Hpy8I GTNNAC 5 cut(s) 277, 301, 313, 493, 1210
Hpy99I CGWCG 5 cut(s) 140, 208, 284, 310, 356
HpyAV CCTTC 6 cut(s) 111, 337, 382, 763, 879, 1243
HpyCH4IV ACGT 1 cut(s) 922
HpyF10VI GCNNNNNNNGC 4 cut(s) 19, 514, 523, 1531
HpyF3I CTNAG 8 cut(s) 177, 468, 696, 824, 848, 873, 1263, 1314
HpySE526I ACGT 1 cut(s) 922
Hsp92I GRCGYC 1 cut(s) 252
Hsp92II CATG 7 cut(s) 11, 187, 449, 521, 893, 1168, 1237
HspAI GCGC 2 cut(s) 703, 1216
KroI GCCGGC 1 cut(s) 28
KroNI GCCGGC 1 cut(s) 30
KspAI GTTAAC 1 cut(s) 493
Kzo9I GATC 4 cut(s) 394, 676, 749, 898
LmnI GCTCC 8 cut(s) 51, 89, 327, 685, 733, 893, 921, 1198
Lsp1109I GCAGC 5 cut(s) 704, 1330, 1504, 1528, 1542
LweI GCATC 7 cut(s) 765, 876, 1024, 1180, 1246, 1422, 1504
MaeI CTAG 3 cut(s) 56, 423, 809
MaeII ACGT 1 cut(s) 922
MaeIII GTNAC 3 cut(s) 536, 545, 1125
MalI GATC 4 cut(s) 396, 678, 751, 900
MboI GATC 4 cut(s) 394, 676, 749, 898
MfeI CAATTG 1 cut(s) 41
MflI RGATCY 1 cut(s) 676
MhlI GDGCHC 2 cut(s) 40, 738
MlsI TGGCCA 1 cut(s) 963
MluI ACGCGT 1 cut(s) 303
MluNI TGGCCA 1 cut(s) 963
MlyI GAGTC 2 cut(s) 10, 102
MmeI TCCRAC 1 cut(s) 943
Mox20I TGGCCA 1 cut(s) 963
Mph1103I ATGCAT 3 cut(s) 891, 1235, 1239
MreI CGCCGGCG 1 cut(s) 28
MroNI GCCGGC 1 cut(s) 28
MscI TGGCCA 1 cut(s) 963
MseI TTAA 7 cut(s) 321, 480, 492, 711, 1142, 1308, 1454
MslI CAYNNNNRTG 4 cut(s) 1023, 1134, 1242, 1284
Msp20I TGGCCA 1 cut(s) 963
MspI CCGG 2 cut(s) 29, 1335
MspR9I CCNGG 2 cut(s) 566, 965
MunI CAATTG 1 cut(s) 41
Mva1269I GAATGC 3 cut(s) 1060, 1477, 1543
MvaI CCWGG 2 cut(s) 566, 965
MvnI CGCG 3 cut(s) 91, 305, 705
MwoI GCNNNNNNNGC 4 cut(s) 19, 514, 523, 1531
NaeI GCCGGC 1 cut(s) 30
NdeII GATC 4 cut(s) 394, 676, 749, 898
NgoMIV GCCGGC 1 cut(s) 28
NlaIII CATG 7 cut(s) 11, 187, 449, 521, 893, 1168, 1237
NlaIV GGNNCC 5 cut(s) 38, 85, 362, 867, 917
NmeAIII GCCGAG 1 cut(s) 507
NmuCI GTSAC 2 cut(s) 536, 545
NruI TCGCGA 1 cut(s) 91
NsiI ATGCAT 3 cut(s) 891, 1235, 1239
NspI RCATGY 2 cut(s) 521, 1237
OliI CACNNNNGTG 1 cut(s) 1023
PaeI GCATGC 1 cut(s) 1237
PaeR7I CTCGAG 1 cut(s) 290
PceI AGGCCT 1 cut(s) 968
PcsI WCGNNNNNNNCGW 2 cut(s) 200, 288
PctI GAATGC 3 cut(s) 1060, 1477, 1543
PdiI GCCGGC 1 cut(s) 30
PfeI GAWTC 3 cut(s) 191, 1068, 1175
PflFI GACNNNGTC 2 cut(s) 284, 403
PkrI GCNGC 7 cut(s) 694, 707, 1320, 1494, 1543, 1557, 1560
PleI GAGTC 2 cut(s) 10, 101
PpsI GAGTC 2 cut(s) 10, 101
PpuMI RGGWCCY 2 cut(s) 286, 865
PshAI GACNNNNGTC 1 cut(s) 543
Psp5II RGGWCCY 2 cut(s) 286, 865
Psp6I CCWGG 2 cut(s) 564, 963
PspEI GGTNACC 1 cut(s) 545
PspGI CCWGG 2 cut(s) 564, 963
PspN4I GGNNCC 5 cut(s) 38, 85, 362, 867, 917
PspOMI GGGCCC 1 cut(s) 36
PspPI GGNCC 5 cut(s) 36, 37, 286, 839, 865
PspPPI RGGWCCY 2 cut(s) 286, 865
PstI CTGCAG 1 cut(s) 1560
PsuI RGATCY 1 cut(s) 676
PsyI GACNNNGTC 2 cut(s) 284, 403
RruI TCGCGA 1 cut(s) 91
RsaI GTAC 2 cut(s) 1369, 1384
RsaNI GTAC 2 cut(s) 1368, 1383
RseI CAYNNNNRTG 4 cut(s) 1023, 1134, 1242, 1284
SaqAI TTAA 7 cut(s) 321, 480, 492, 711, 1142, 1308, 1454
SatI GCNGC 7 cut(s) 693, 706, 1319, 1493, 1542, 1556, 1559
Sau3AI GATC 4 cut(s) 394, 676, 749, 898
Sau96I GGNCC 5 cut(s) 36, 37, 286, 839, 865
ScaI AGTACT 1 cut(s) 1384
SchI GAGTC 2 cut(s) 10, 102
ScrFI CCNGG 2 cut(s) 566, 965
SduI GDGCHC 2 cut(s) 40, 738
SfaNI GCATC 7 cut(s) 765, 876, 1024, 1180, 1246, 1422, 1504
SfcI CTRYAG 1 cut(s) 1556
Sfr274I CTCGAG 1 cut(s) 290
SgrAI CRCCGGYG 1 cut(s) 28
SinI GGWCC 3 cut(s) 286, 839, 865
SlaI CTCGAG 1 cut(s) 290
SmiMI CAYNNNNRTG 4 cut(s) 1023, 1134, 1242, 1284
SmlI CTYRAG 3 cut(s) 290, 680, 970
SmoI CTYRAG 3 cut(s) 290, 680, 970
SphI GCATGC 1 cut(s) 1237
SseBI AGGCCT 1 cut(s) 968
SsiI CCGC 9 cut(s) 20, 26, 127, 550, 629, 705, 722, 1072, 1351
SspMI CTAG 3 cut(s) 56, 423, 809
StuI AGGCCT 1 cut(s) 968
StyD4I CCNGG 2 cut(s) 564, 963
StyI CCWWGG 4 cut(s) 231, 408, 432, 757
TaiI ACGT 1 cut(s) 925
TaqI TCGA 8 cut(s) 135, 156, 189, 194, 291, 748, 901, 1416
TaqII GACCGA 1 cut(s) 827
TatI WGTACW 1 cut(s) 1382
TauI GCSGC 1 cut(s) 708
TfiI GAWTC 3 cut(s) 191, 1068, 1175
Tru1I TTAA 7 cut(s) 321, 480, 492, 711, 1142, 1308, 1454
Tru9I TTAA 7 cut(s) 321, 480, 492, 711, 1142, 1308, 1454
TscAI CASTG 3 cut(s) 538, 964, 1267
TseFI GTSAC 2 cut(s) 536, 545
TseI GCWGC 6 cut(s) 692, 1318, 1492, 1541, 1555, 1558
Tsp45I GTSAC 2 cut(s) 536, 545
TspDTI ATGAA 6 cut(s) 434, 548, 729, 821, 1392, 1470
TspRI CASTG 3 cut(s) 538, 964, 1267
Tth111I GACNNNGTC 2 cut(s) 284, 403
VpaK11BI GGWCC 3 cut(s) 286, 839, 865
XagI CCTNNNNNAGG 1 cut(s) 1549
XapI RAATTY 6 cut(s) 140, 716, 780, 828, 1183, 1267
XceI RCATGY 2 cut(s) 521, 1237
XcmI CCANNNNNNNNNTGG 2 cut(s) 371, 926
XhoI CTCGAG 1 cut(s) 290
XspI CTAG 3 cut(s) 56, 423, 809
ZrmI AGTACT 1 cut(s) 1384
Zsp2I ATGCAT 3 cut(s) 891, 1235, 1239
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.