Prupe.7G010800_v2.0.a1

Exosome component 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0004155
Physical Location & Seq
Forward (+)
1421775 .. 1432501
10727 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G010800.1

Sequence Viewer

Length: 2760 bp
ATGCCATTGACAACCACCGTGAGCGAAGAAGCCATGAAGGTGGACCAACCTCAGCCACCGCGGACCGAAGCCCTCCAAACCCTAACCAAAGGTCCTCTCTCCTCGGCGATATCCAAGCTCTCAGGCTCATCGCGAGGCATACCTTCCAACCAAGACTTCTATTTCTACCGCAACTTCGACAAATTCAAGGTCCCGATCGAACAAATCACAGAACAGTCGCAGTTAATGCTCGGCTCCGTTGGCTCTTCGGCGCCTATTTGGGGCAAAAAGATGGCTTTCCCCCAAGACTTGGACGACGCGTACGATTGGCTGGTTAACGTCAACGACGAGGTGCTCGAAAGGTTTGACTCGTCGGTGGACGAGTTCAAGAGGATCAGGAAAGAGGCAGAAGAGCCCAAGCGGCCGATGATTGCGGATTTTGACTCGGAAAATGGGTTTCAATTGGTCTGTGGGAAGAAGAAGAAGGGGCCCAGTGGCTCGGCGAGTGCTAATGGTGATTCGACTCAGGTCTCGAGCGTGAAGGTGGCTACCAAGGACAAGAAGACTGTGGGGACGAAGCCCAAGGTACCGTTTCATATACCGACAATTCGGAGGCCTCAGGAGGAGTTCAACATTTTGGTTAATAATTCAAACCAGCCGTTTGAGCATGTTTGGTTGCAGAGAAGTGAGGACGATCAGCGTTTTCTTCATCCCCTTGATAAGCTTTCTGTTCTGGATTTTGTTGGCACTGACGTTGGGGATGTTGAGCCTGTAAAACCACCCTCATTAGAGTCTACGCCATTCAAGCTTGTGGAGGAGGTCAAAGATCTGAAAGAGCTGGCAGCTAAGCTGCGTGGTGTTAATGAATTTGCGGTTGATTTGGAACACAATCAATATCGATCCTTTCAAGGAATGACTTGCTTGATGCAAATTTCTACTAGAACTGAAGATTTTATAGTAGATACTTTGAAGCTTAGAATTCATGTTGGTCCATATCTTAGGGAAGTTTTCAAGGACCCTGCCAAGAGAAAGGTGATGCATGGAGCAGATCGAGATATCATGTGGCTTCAACGTGATTTTGGCATTTATATCTGCAATTTGTTTGATACTGGCCAGGCCTCAAGGGTATTGAAAATGGAGAGAAATAGTTTGGAATATCTTTTACATCAGTTATGTGGTGTTACTGCTAACAAAGAATACCAGAATGCAGATTGGAGATTACGCCCTCTTCCTGAGGAGATGGTCAGATATGCCAGAGAAGATACACACTATCTGTTGCACATGTATGATTTAATGAGAACAATGTTATGTTTGATGCCAAAGGAATCAGAAAACTTGGACACTCCTTTAGTAGAGGTTTACAAGCGGAGTTATGATATATGCATGCATCTGTATGAGAAAGAGCTTTTGACAGAAAATTCCTATCTCCATATATATGGGTTGCAAGGTGCTGGTTTCAATGCTCAGCAGCTTGCAATTGTTTCCGGTCTTTGTGAGTGGCGGGATGTTGTTGCTCGTGCAGAGGATGAAAGTACTGGCTATATATTACCAAACAAAACTCTTCTTGAAATTGCTAAACAGATGCCTAGCACCACTAGCAAGTTAAAGCGATTGGTGAAATCAAAGCACCCGTATGTTGAGCGCAATCTTGCTTCTGTGGTTAGCATCATTGGGCATTCTATGCAAAATGCTGCTTTTTTTGAGCCTGCGGTCGAACATCTGAAATTGGGACATGCGGGTATGGCAACTGAAGAGAATATATTGGCAAATGAAGGATCTGAAGCCGTCTTACCTGATGAGTCTGGCAGCAATTCAATTAAAGGTGATATATCTGCAGCTTCACCTGCTTCTCCGCCACATAAAATGGAGGATACTGAACTTGGATGTGATGCCTCGGAACTTGTAAGAGGTGGACAAGAAAGCTCTCTTGAGCATCCTGGTGAAAATAGGAAAGGAAAGATTGAATGTGGTAGCAACACTTCTGTGCTTCCTAGACAGAATATTGTTCCGCGGCAAAGCAGAGAAGCAAGCAGCAATGCCTGTGTATTAGATTCAACAAAGGTTACTGGAGTAAGTGTTCAGGTGCAAAAGAAGCCTAGCTGTGCCTTTAGTTCCCTGTTGGGGAGTGGAGTTCCAAAAAGAAAGTTTGATGCTGATAGAAAGAACAAGGAAGACAAGTTGGAGCAAATTAGGTCGTCAATGAACTTTCCTTTCCACTCATTTACGGGAAGCAGTGAGCAATCAAAGCCAATCATCGAAGCACCAGCTACAAGTTCCAAAATTCCCCACTCTGAAGGGCCTCTCACTGCATCACCTGAGAGGTCTAATTTAGTTGATATCATAACACTGGAAAATGATTCAGATGTGGGTGAACCAATAAATGGTTGCTCAGAAACGAGAAATGAGAATGATTCAGTGGCATCTGCTTTGGAGAGGGATGGAGAGGATGAACCTATGTCTCTCTCCGATTTGTCCTCAAGCTTCCAAAAATGTTTTCAGTCACGTAAGCAAAACAAGAAACCCAGAGAAGTGGAGAAATCCCAAGAATCTGGTGGTTTGCAGGTGAAGCCTTTTGACTATGAAGCAGCAAAGAGAGGGGTCATTTTTGGAGCTAAGCCAGTTAAAGAAGCTGGGGAAGGTGTAAGGAGCCTGAATTCAGGAGGGAAGAAAAAATCTTTAGGCGGTATAGTCTCAAATGATGATGGGTCAAAAGAACTAGCACAAGGTAGACGACGACAAGCTTTTCCAGCAAGTGGAAATAGAAGTGCAACGTTTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000175 GO:0000178 GO:0000460 GO:0000785 GO:0000956 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006364 GO:0006396 GO:0006401 GO:0006402 GO:0006403 GO:0006725 GO:0006807 GO:0007549 GO:0008150 GO:0008152 GO:0008298 GO:0008334 GO:0008408 GO:0009048 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0010639 GO:0016070 GO:0016071 GO:0016072 GO:0016075 GO:0016458 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019219 GO:0019222 GO:0019439 GO:0022613 GO:0031047 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032204 GO:0032205 GO:0032210 GO:0032211 GO:0032259 GO:0032268 GO:0032270 GO:0032879 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0035327 GO:0040029 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043632 GO:0043633 GO:0043634 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044728 GO:0045934 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051246 GO:0051247 GO:0051641 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0071025 GO:0071027 GO:0071028 GO:0071029 GO:0071030 GO:0071033 GO:0071034 GO:0071035 GO:0071043 GO:0071044 GO:0071046 GO:0071048 GO:0071704 GO:0071840 GO:0080090 GO:0080188 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1902275 GO:1902464 GO:1902466 GO:1902494 GO:1904356 GO:1904357 GO:1904872 GO:1905269 GO:1905354 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
DNA_pol_A_exo1 HRDC PMC2NT

Protein Analysis

920

Amino Acids

102.31

Weight (kDa)

6.05

Isoelectric Point (pI)

53.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1831, 2530
Acc36I ACCTGC 2 cut(s) 1831, 2530
Acc65I GGTACC 1 cut(s) 565
AccB1I GGYRCC 2 cut(s) 250, 565
AccB7I CCANNNNNTGG 3 cut(s) 289, 2360, 2732
AccI GTMKAC 2 cut(s) 773, 2707
AccII CGCG 4 cut(s) 61, 133, 299, 1990
AclI AACGTT 1 cut(s) 2750
AclWI GGATC 3 cut(s) 380, 873, 1762
AcoI YGGCCR 2 cut(s) 401, 1090
AcsI RAATTY 7 cut(s) 182, 845, 909, 957, 1396, 2259, 2632
AcuI CTGAAG 4 cut(s) 945, 1749, 1779, 2292
AcyI GRCGYC 1 cut(s) 251
AfaI GTAC 3 cut(s) 302, 567, 1513
AfiI CCNNNNNNNGG 5 cut(s) 260, 289, 2100, 2360, 2732
AflIII ACRYGT 2 cut(s) 297, 1260
AjnI CCWGG 2 cut(s) 1092, 1915
AjuI GAANNNNNNNTTGG 4 cut(s) 140, 172, 2457, 2489
AleI CACNNNNGTG 1 cut(s) 1961
AloI GAACNNNNNNTCC 2 cut(s) 2040, 2072
Alw21I GWGCWC 1 cut(s) 336
Alw26I GTCTC 3 cut(s) 514, 2442, 2674
AlwI GGATC 3 cut(s) 380, 873, 1762
Ama87I CYCGRG 1 cut(s) 511
AoxI GGCC 6 cut(s) 401, 467, 593, 1090, 1095, 2276
ApaI GGGCCC 1 cut(s) 471
ApeKI GCWGC 8 cut(s) 821, 829, 1447, 1670, 1785, 1814, 2010, 2564
ApoI RAATTY 7 cut(s) 182, 845, 909, 957, 1396, 2259, 2632
ArsI GACNNNNNNTTYG 2 cut(s) 174, 206
Asp718I GGTACC 1 cut(s) 565
AspLEI GCGC 2 cut(s) 253, 1623
AspS9I GGNCC 9 cut(s) 43, 63, 92, 190, 467, 468, 968, 994, 2276
AsuHPI GGTGA 9 cut(s) 506, 1024, 1606, 1812, 1814, 1931, 2283, 2360, 2554
AvaI CYCGRG 1 cut(s) 511
AvaII GGWCC 6 cut(s) 43, 63, 92, 190, 968, 994
AxyI CCTNAGG 2 cut(s) 597, 1212
BaeGI GKGCMC 1 cut(s) 471
BalI TGGCCA 1 cut(s) 1092
BanI GGYRCC 2 cut(s) 250, 565
BanII GRGCYC 2 cut(s) 396, 471
BarI GAAGNNNNNNTAC 4 cut(s) 1752, 1784, 1942, 1974
BauI CACGAG 1 cut(s) 1494
BbsI GAAGAC 2 cut(s) 548, 2157
Bbv12I GWGCWC 1 cut(s) 336
BbvCI CCTCAGC 1 cut(s) 51
BbvI GCAGC 8 cut(s) 816, 833, 1459, 1657, 1797, 1826, 2022, 2576
BccI CCATC 4 cut(s) 265, 1213, 2411, 2675
BceAI ACGGC 2 cut(s) 622, 1748
BciT130I CCWGG 2 cut(s) 1094, 1917
BciVI GTATCC 1 cut(s) 1843
BcoDI GTCTC 3 cut(s) 514, 2442, 2674
BfaI CTAG 6 cut(s) 918, 1566, 1575, 1971, 2076, 2696
BfmI CTRYAG 1 cut(s) 1812
BfoI RGCGCY 1 cut(s) 254
BfuAI ACCTGC 2 cut(s) 1831, 2530
BfuI GTATCC 1 cut(s) 1843
BglI GCCNNNNNGGC 1 cut(s) 400
BglII AGATCT 1 cut(s) 805
BlpI GCTNAGC 3 cut(s) 825, 1443, 2592
BmcAI AGTACT 1 cut(s) 1513
Bme1390I CCNGG 2 cut(s) 1094, 1917
Bme18I GGWCC 6 cut(s) 43, 63, 92, 190, 968, 994
BmeT110I CYCGRG 1 cut(s) 511
BmgT120I GGNCC 9 cut(s) 43, 63, 92, 190, 467, 468, 968, 994, 2276
BmiI GGNNCC 8 cut(s) 192, 235, 252, 468, 469, 567, 996, 2627
BmrFI CCNGG 2 cut(s) 1094, 1917
BmrI ACTGGG 1 cut(s) 465
BmuI ACTGGG 1 cut(s) 465
BoxI GACNNNNGTC 1 cut(s) 506
BpiI GAAGAC 2 cut(s) 548, 2157
BpmI CTGGAG 1 cut(s) 2067
Bpu10I CCTNAGC 1 cut(s) 51
Bpu1102I GCTNAGC 3 cut(s) 825, 1443, 2592
BpuEI CTTGAG 3 cut(s) 1084, 1928, 2440
Bsa29I ATCGAT 1 cut(s) 877
BsaAI YACGTR 1 cut(s) 2483
BsaHI GRCGYC 1 cut(s) 251
BsaI GGTCTC 1 cut(s) 514
BsaJI CCNNGG 6 cut(s) 59, 102, 531, 561, 1872, 1988
BsaWI WCCGGW 1 cut(s) 1463
BsaXI ACNNNNNCTCC 2 cut(s) 2040, 2070
Bsc4I CCNNNNNNNGG 5 cut(s) 260, 289, 2100, 2360, 2732
Bse1I ACTGG 6 cut(s) 471, 1093, 1519, 2050, 2331, 2597
Bse21I CCTNAGG 2 cut(s) 597, 1212
Bse3DI GCAATG 1 cut(s) 2020
BseBI CCWGG 2 cut(s) 1094, 1917
BseCI ATCGAT 1 cut(s) 877
BseDI CCNNGG 6 cut(s) 59, 102, 531, 561, 1872, 1988
BseGI GGATG 8 cut(s) 688, 745, 1489, 1510, 1868, 1912, 2422, 2431
BseLI CCNNNNNNNGG 5 cut(s) 260, 289, 2100, 2360, 2732
BseMI GCAATG 1 cut(s) 2020
BseMII CTCAG 8 cut(s) 65, 135, 518, 611, 1203, 1457, 2286, 2382
BseNI ACTGG 6 cut(s) 471, 1093, 1519, 2050, 2331, 2597
BseRI GAGGAG 4 cut(s) 91, 617, 809, 1229
BseSI GKGCMC 1 cut(s) 471
BseX3I CGGCCG 1 cut(s) 401
BseXI GCAGC 8 cut(s) 816, 833, 1459, 1657, 1797, 1826, 2022, 2576
BseYI CCCAGC 1 cut(s) 2609
BsgI GTGCAG 1 cut(s) 1518
Bsh1236I CGCG 4 cut(s) 61, 133, 299, 1990
Bsh1285I CGRYCG 3 cut(s) 198, 404, 1692
BshFI GGCC 6 cut(s) 403, 469, 595, 1092, 1097, 2278
BshNI GGYRCC 2 cut(s) 250, 565
BshVI ATCGAT 1 cut(s) 877
BsiEI CGRYCG 3 cut(s) 198, 404, 1692
BsiHKAI GWGCWC 1 cut(s) 336
BsiHKCI CYCGRG 1 cut(s) 511
BsiSI CCGG 1 cut(s) 1464
BsiWI CGTACG 1 cut(s) 300
BslFI GGGAC 3 cut(s) 176, 565, 1722
BslI CCNNNNNNNGG 5 cut(s) 260, 289, 2100, 2360, 2732
BsmAI GTCTC 3 cut(s) 514, 2442, 2674
BsmFI GGGAC 3 cut(s) 176, 565, 1722
BsmI GAATGC 2 cut(s) 1189, 1654
BsnI GGCC 6 cut(s) 403, 469, 595, 1092, 1097, 2278
Bso31I GGTCTC 1 cut(s) 514
BsoBI CYCGRG 1 cut(s) 511
Bsp120I GGGCCC 1 cut(s) 467
Bsp1286I GDGCHC 3 cut(s) 336, 396, 471
Bsp143I GATC 7 cut(s) 195, 372, 673, 805, 878, 1027, 1754
Bsp1720I GCTNAGC 3 cut(s) 825, 1443, 2592
Bsp68I TCGCGA 1 cut(s) 133
BspANI GGCC 6 cut(s) 403, 469, 595, 1092, 1097, 2278
BspCNI CTCAG 8 cut(s) 64, 134, 517, 610, 1204, 1456, 2287, 2381
BspDI ATCGAT 1 cut(s) 877
BspFNI CGCG 4 cut(s) 61, 133, 299, 1990
BspLI GGNNCC 8 cut(s) 192, 235, 252, 468, 469, 567, 996, 2627
BspMAI CTGCAG 1 cut(s) 1816
BspMI ACCTGC 2 cut(s) 1831, 2530
BspPI GGATC 3 cut(s) 380, 873, 1762
BspQI GCTCTTC 2 cut(s) 250, 384
BspT107I GGYRCC 2 cut(s) 250, 565
BspTNI GGTCTC 1 cut(s) 514
BsrDI GCAATG 1 cut(s) 2020
BsrI ACTGG 6 cut(s) 471, 1093, 1519, 2050, 2331, 2597
BssECI CCNNGG 6 cut(s) 59, 102, 531, 561, 1872, 1988
BssMI GATC 7 cut(s) 195, 372, 673, 805, 878, 1027, 1754
BssNI GRCGYC 1 cut(s) 251
BssSI CACGAG 1 cut(s) 1494
BssT1I CCWWGG 2 cut(s) 531, 561
Bst2BI CACGAG 1 cut(s) 1494
Bst2UI CCWGG 2 cut(s) 1094, 1917
Bst4CI ACNGT 4 cut(s) 19, 216, 547, 570
Bst6I CTCTTC 5 cut(s) 250, 384, 1212, 1545, 1725
BstACI GRCGYC 1 cut(s) 251
BstAPI GCANNNNNTGC 2 cut(s) 226, 1660
BstBAI YACGTR 1 cut(s) 2483
BstC8I GCNNGC 5 cut(s) 819, 1364, 1452, 1686, 2008
BstDSI CCRYGG 2 cut(s) 59, 1988
BstF5I GGATG 8 cut(s) 688, 745, 1489, 1510, 1868, 1912, 2422, 2431
BstFNI CGCG 4 cut(s) 61, 133, 299, 1990
BstH2I RGCGCY 1 cut(s) 254
BstHHI GCGC 2 cut(s) 253, 1623
BstKTI GATC 7 cut(s) 198, 375, 676, 808, 881, 1030, 1757
BstMAI GTCTC 3 cut(s) 514, 2442, 2674
BstMBI GATC 7 cut(s) 195, 372, 673, 805, 878, 1027, 1754
BstMCI CGRYCG 3 cut(s) 198, 404, 1692
BstNI CCWGG 2 cut(s) 1094, 1917
BstNSI RCATGY 4 cut(s) 650, 1264, 1366, 1715
BstPAI GACNNNNGTC 1 cut(s) 506
BstSCI CCNGG 2 cut(s) 1092, 1915
BstSFI CTRYAG 1 cut(s) 1812
BstSLI GKGCMC 1 cut(s) 471
BstUI CGCG 4 cut(s) 61, 133, 299, 1990
BstV1I GCAGC 8 cut(s) 816, 833, 1459, 1657, 1797, 1826, 2022, 2576
BstV2I GAAGAC 2 cut(s) 548, 2157
BstX2I RGATCY 2 cut(s) 805, 1754
BstXI CCANNNNNNTGG 4 cut(s) 40, 1415, 2509, 2528
BstYI RGATCY 2 cut(s) 805, 1754
BstZI CGGCCG 1 cut(s) 401
Bsu15I ATCGAT 1 cut(s) 877
Bsu36I CCTNAGG 2 cut(s) 597, 1212
BsuI GTATCC 1 cut(s) 1843
BsuRI GGCC 6 cut(s) 403, 469, 595, 1092, 1097, 2278
BsuTUI ATCGAT 1 cut(s) 877
BtgI CCRYGG 2 cut(s) 59, 1988
BtgZI GCGATG 1 cut(s) 114
BtsCI GGATG 8 cut(s) 688, 745, 1489, 1510, 1868, 1912, 2422, 2431
BtsI GCAGTG 2 cut(s) 2218, 2283
BtsIMutI CAGTG 6 cut(s) 478, 726, 2218, 2283, 2324, 2400
BtuMI TCGCGA 1 cut(s) 133
BveI ACCTGC 2 cut(s) 1831, 2530
Cac8I GCNNGC 5 cut(s) 819, 1364, 1452, 1686, 2008
CfoI GCGC 2 cut(s) 253, 1623
Cfr13I GGNCC 9 cut(s) 43, 63, 92, 190, 467, 468, 968, 994, 2276
Cfr42I CCGCGG 2 cut(s) 62, 1991
ClaI ATCGAT 1 cut(s) 877
CpoI CGGWCCG 1 cut(s) 63
CseI GACGC 1 cut(s) 305
Csp6I GTAC 3 cut(s) 301, 566, 1512
CspI CGGWCCG 1 cut(s) 63
CviAII CATG 8 cut(s) 34, 647, 962, 1019, 1039, 1261, 1363, 1712
CviQI GTAC 3 cut(s) 301, 566, 1512
DinI GGCGCC 1 cut(s) 252
DpnI GATC 7 cut(s) 197, 374, 675, 807, 880, 1029, 1756
DpnII GATC 7 cut(s) 195, 372, 673, 805, 878, 1027, 1754
EaeI YGGCCR 2 cut(s) 401, 1090
EagI CGGCCG 1 cut(s) 401
Eam1104I CTCTTC 5 cut(s) 250, 384, 1212, 1545, 1725
EarI CTCTTC 5 cut(s) 250, 384, 1212, 1545, 1725
EciI GGCGGA 1 cut(s) 1821
EclXI CGGCCG 1 cut(s) 401
Eco130I CCWWGG 2 cut(s) 531, 561
Eco147I AGGCCT 2 cut(s) 595, 1097
Eco24I GRGCYC 2 cut(s) 396, 471
Eco31I GGTCTC 1 cut(s) 514
Eco32I GATATC 3 cut(s) 111, 1036, 2317
Eco47I GGWCC 6 cut(s) 43, 63, 92, 190, 968, 994
Eco52I CGGCCG 1 cut(s) 401
Eco57I CTGAAG 4 cut(s) 945, 1749, 1779, 2292
Eco81I CCTNAGG 2 cut(s) 597, 1212
Eco88I CYCGRG 1 cut(s) 511
EcoO109I RGGNCCY 5 cut(s) 92, 190, 467, 994, 2276
EcoRI GAATTC 2 cut(s) 957, 2632
EcoRII CCWGG 2 cut(s) 1092, 1915
EcoRV GATATC 3 cut(s) 111, 1036, 2317
EcoT14I CCWWGG 2 cut(s) 531, 561
EcoT22I ATGCAT 3 cut(s) 1020, 1364, 1368
EcoT38I GRGCYC 2 cut(s) 396, 471
EgeI GGCGCC 1 cut(s) 252
EheI GGCGCC 1 cut(s) 252
ErhI CCWWGG 2 cut(s) 531, 561
FaeI CATG 8 cut(s) 37, 650, 965, 1022, 1042, 1264, 1366, 1715
FaqI GGGAC 3 cut(s) 176, 565, 1722
FatI CATG 8 cut(s) 33, 646, 961, 1018, 1038, 1260, 1362, 1711
FauI CCCGC 2 cut(s) 1473, 1708
FblI GTMKAC 2 cut(s) 773, 2707
FokI GGATG 8 cut(s) 675, 752, 1496, 1517, 1875, 1899, 2429, 2438
FriOI GRGCYC 2 cut(s) 396, 471
FspBI CTAG 6 cut(s) 918, 1566, 1575, 1971, 2076, 2696
GlaI GCGC 2 cut(s) 252, 1622
GsaI CCCAGC 1 cut(s) 2613
GsuI CTGGAG 1 cut(s) 2067
HaeII RGCGCY 1 cut(s) 254
HaeIII GGCC 6 cut(s) 403, 469, 595, 1092, 1097, 2278
HapII CCGG 1 cut(s) 1464
HgaI GACGC 1 cut(s) 305
HhaI GCGC 2 cut(s) 253, 1623
Hin1I GRCGYC 1 cut(s) 251
Hin1II CATG 8 cut(s) 37, 650, 965, 1022, 1042, 1264, 1366, 1715
Hin6I GCGC 2 cut(s) 251, 1621
HinP1I GCGC 2 cut(s) 251, 1621
HincII GTYRAC 2 cut(s) 316, 322
HindII GTYRAC 2 cut(s) 316, 322
HindIII AAGCTT 5 cut(s) 701, 785, 950, 2458, 2718
HpaI GTTAAC 1 cut(s) 316
HpaII CCGG 1 cut(s) 1464
HphI GGTGA 9 cut(s) 506, 1024, 1606, 1812, 1814, 1931, 2283, 2360, 2554
Hpy166II GTNNAC 9 cut(s) 43, 316, 322, 358, 774, 1339, 1892, 2351, 2708
Hpy8I GTNNAC 9 cut(s) 43, 316, 322, 358, 774, 1339, 1892, 2351, 2708
Hpy99I CGWCG 4 cut(s) 299, 329, 355, 2715
HpyAV CCTTC 7 cut(s) 31, 153, 457, 514, 1745, 2267, 2609
HpyCH4III ACNGT 4 cut(s) 19, 216, 547, 570
HpyCH4IV ACGT 5 cut(s) 318, 732, 1051, 2482, 2750
HpySE526I ACGT 5 cut(s) 318, 732, 1051, 2482, 2750
Hsp92I GRCGYC 1 cut(s) 251
Hsp92II CATG 8 cut(s) 37, 650, 965, 1022, 1042, 1264, 1366, 1715
HspAI GCGC 2 cut(s) 251, 1621
KasI GGCGCC 1 cut(s) 250
KpnI GGTACC 1 cut(s) 569
KspAI GTTAAC 1 cut(s) 316
KspI CCGCGG 2 cut(s) 62, 1991
Kzo9I GATC 7 cut(s) 195, 372, 673, 805, 878, 1027, 1754
LguI GCTCTTC 2 cut(s) 250, 384
LmnI GCTCC 5 cut(s) 239, 1022, 2161, 2588, 2625
Lsp1109I GCAGC 8 cut(s) 816, 833, 1459, 1657, 1797, 1826, 2022, 2576
MaeI CTAG 6 cut(s) 918, 1566, 1575, 1971, 2076, 2696
MaeII ACGT 5 cut(s) 318, 732, 1051, 2482, 2750
MaeIII GTNAC 3 cut(s) 1159, 2041, 2478
MalI GATC 7 cut(s) 197, 374, 675, 807, 880, 1029, 1756
MboI GATC 7 cut(s) 195, 372, 673, 805, 878, 1027, 1754
MfeI CAATTG 2 cut(s) 440, 1455
MflI RGATCY 2 cut(s) 805, 1754
MhlI GDGCHC 3 cut(s) 336, 396, 471
MlsI TGGCCA 1 cut(s) 1092
MluI ACGCGT 1 cut(s) 297
MluNI TGGCCA 1 cut(s) 1092
Mly113I GGCGCC 1 cut(s) 251
MlyI GAGTC 5 cut(s) 341, 416, 496, 779, 1787
MmeI TCCRAC 2 cut(s) 171, 2139
Mox20I TGGCCA 1 cut(s) 1092
Mph1103I ATGCAT 3 cut(s) 1020, 1364, 1368
MscI TGGCCA 1 cut(s) 1092
MseI TTAA 9 cut(s) 224, 315, 621, 840, 1271, 1583, 1797, 2601, 2758
MslI CAYNNNNRTG 7 cut(s) 38, 1263, 1371, 1413, 1611, 1917, 1961
Msp20I TGGCCA 1 cut(s) 1092
MspA1I CMGCKG 2 cut(s) 61, 1990
MspI CCGG 1 cut(s) 1464
MspR9I CCNGG 2 cut(s) 1094, 1917
MunI CAATTG 2 cut(s) 440, 1455
Mva1269I GAATGC 2 cut(s) 1189, 1654
MvaI CCWGG 2 cut(s) 1094, 1917
MvnI CGCG 4 cut(s) 61, 133, 299, 1990
NarI GGCGCC 1 cut(s) 251
NdeII GATC 7 cut(s) 195, 372, 673, 805, 878, 1027, 1754
NlaIII CATG 8 cut(s) 37, 650, 965, 1022, 1042, 1264, 1366, 1715
NlaIV GGNNCC 8 cut(s) 192, 235, 252, 468, 469, 567, 996, 2627
NmeAIII GCCGAG 3 cut(s) 83, 210, 458
NmuCI GTSAC 1 cut(s) 2478
NruI TCGCGA 1 cut(s) 133
NsiI ATGCAT 3 cut(s) 1020, 1364, 1368
NspI RCATGY 4 cut(s) 650, 1264, 1366, 1715
OliI CACNNNNGTG 1 cut(s) 1961
PaeI GCATGC 1 cut(s) 1366
PaeR7I CTCGAG 1 cut(s) 511
PaqCI CACCTGC 2 cut(s) 1831, 2530
PceI AGGCCT 2 cut(s) 595, 1097
PciI ACATGT 1 cut(s) 1260
PciSI GCTCTTC 2 cut(s) 250, 384
PcsI WCGNNNNNNNCGW 3 cut(s) 300, 324, 333
PctI GAATGC 2 cut(s) 1189, 1654
PfeI GAWTC 6 cut(s) 497, 1304, 2030, 2336, 2390, 2525
Pfl23II CGTACG 1 cut(s) 300
PflMI CCANNNNNTGG 3 cut(s) 289, 2360, 2732
Ple19I CGATCG 1 cut(s) 198
PleI GAGTC 5 cut(s) 341, 416, 496, 778, 1786
PluTI GGCGCC 1 cut(s) 254
PpsI GAGTC 5 cut(s) 341, 416, 496, 778, 1786
Ppu21I YACGTR 1 cut(s) 2483
PpuMI RGGWCCY 3 cut(s) 92, 190, 994
PscI ACATGT 1 cut(s) 1260
PshAI GACNNNNGTC 1 cut(s) 506
Psp1406I AACGTT 1 cut(s) 2750
Psp5II RGGWCCY 3 cut(s) 92, 190, 994
Psp6I CCWGG 2 cut(s) 1092, 1915
PspFI CCCAGC 1 cut(s) 2609
PspGI CCWGG 2 cut(s) 1092, 1915
PspLI CGTACG 1 cut(s) 300
PspN4I GGNNCC 8 cut(s) 192, 235, 252, 468, 469, 567, 996, 2627
PspOMI GGGCCC 1 cut(s) 467
PspPI GGNCC 9 cut(s) 43, 63, 92, 190, 467, 468, 968, 994, 2276
PspPPI RGGWCCY 3 cut(s) 92, 190, 994
PstI CTGCAG 1 cut(s) 1816
PsuI RGATCY 2 cut(s) 805, 1754
PvuI CGATCG 1 cut(s) 198
RruI TCGCGA 1 cut(s) 133
RsaI GTAC 3 cut(s) 302, 567, 1513
RsaNI GTAC 3 cut(s) 301, 566, 1512
RseI CAYNNNNRTG 7 cut(s) 38, 1263, 1371, 1413, 1611, 1917, 1961
Rsr2I CGGWCCG 1 cut(s) 63
RsrII CGGWCCG 1 cut(s) 63
SacII CCGCGG 2 cut(s) 62, 1991
SapI GCTCTTC 2 cut(s) 250, 384
SaqAI TTAA 9 cut(s) 224, 315, 621, 840, 1271, 1583, 1797, 2601, 2758
Sau3AI GATC 7 cut(s) 195, 372, 673, 805, 878, 1027, 1754
Sau96I GGNCC 9 cut(s) 43, 63, 92, 190, 467, 468, 968, 994, 2276
ScaI AGTACT 1 cut(s) 1513
SchI GAGTC 5 cut(s) 341, 416, 496, 779, 1787
ScrFI CCNGG 2 cut(s) 1094, 1917
SduI GDGCHC 3 cut(s) 336, 396, 471
SfcI CTRYAG 1 cut(s) 1812
SfoI GGCGCC 1 cut(s) 252
Sfr274I CTCGAG 1 cut(s) 511
Sfr303I CCGCGG 2 cut(s) 62, 1991
SgrBI CCGCGG 2 cut(s) 62, 1991
SinI GGWCC 6 cut(s) 43, 63, 92, 190, 968, 994
SlaI CTCGAG 1 cut(s) 511
SmiMI CAYNNNNRTG 7 cut(s) 38, 1263, 1371, 1413, 1611, 1917, 1961
SmlI CTYRAG 4 cut(s) 511, 1099, 1907, 2455
SmoI CTYRAG 4 cut(s) 511, 1099, 1907, 2455
SphI GCATGC 1 cut(s) 1366
SseBI AGGCCT 2 cut(s) 595, 1097
SspDI GGCGCC 1 cut(s) 250
SspI AATATT 1 cut(s) 1981
SspMI CTAG 6 cut(s) 918, 1566, 1575, 1971, 2076, 2696
StuI AGGCCT 2 cut(s) 595, 1097
StyD4I CCNGG 2 cut(s) 1092, 1915
StyI CCWWGG 2 cut(s) 531, 561
TaaI ACNGT 4 cut(s) 19, 216, 547, 570
TaiI ACGT 5 cut(s) 321, 735, 1054, 2485, 2753
TaqI TCGA 9 cut(s) 177, 198, 336, 500, 512, 877, 1030, 1692, 2235
TaqII GACCGA 1 cut(s) 80
TatI WGTACW 1 cut(s) 1511
TauI GCSGC 2 cut(s) 403, 1993
TfiI GAWTC 6 cut(s) 497, 1304, 2030, 2336, 2390, 2525
Tru1I TTAA 9 cut(s) 224, 315, 621, 840, 1271, 1583, 1797, 2601, 2758
Tru9I TTAA 9 cut(s) 224, 315, 621, 840, 1271, 1583, 1797, 2601, 2758
TscAI CASTG 6 cut(s) 478, 733, 2218, 2290, 2331, 2400
TseFI GTSAC 1 cut(s) 2478
TseI GCWGC 8 cut(s) 821, 829, 1447, 1670, 1785, 1814, 2010, 2564
Tsp45I GTSAC 1 cut(s) 2478
TspGWI ACGGA 1 cut(s) 226
TspRI CASTG 6 cut(s) 478, 733, 2218, 2290, 2331, 2400
Van91I CCANNNNNTGG 3 cut(s) 289, 2360, 2732
VpaK11BI GGWCC 6 cut(s) 43, 63, 92, 190, 968, 994
XapI RAATTY 7 cut(s) 182, 845, 909, 957, 1396, 2259, 2632
XceI RCATGY 4 cut(s) 650, 1264, 1366, 1715
XcmI CCANNNNNNNNNTGG 1 cut(s) 2528
XhoI CTCGAG 1 cut(s) 511
XmiI GTMKAC 2 cut(s) 773, 2707
XspI CTAG 6 cut(s) 918, 1566, 1575, 1971, 2076, 2696
ZrmI AGTACT 1 cut(s) 1513
Zsp2I ATGCAT 3 cut(s) 1020, 1364, 1368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.