AT5G35910

Exosome component 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0004155
Physical Location & Seq
Reverse (-)
14029574 .. 14035493
5920 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G35910.1

Sequence Viewer

Length: 2613 bp
ATGAGCGACGGTAACATGGACGTCGACGAATCACCAGTCTCTTGGAAGGTAAAGTCTCTGGAGAAATTAATCGATGGTTCTTCTTTCTCTTCGACTCTCTCGAGACTCTCATCGTCTTCTCGCCTAATTCCAACGAGTAGAGATTTTCACTTTTACTACAATTTCGATGAGTTCAAACGCCCAATCGATGAGATAACTGGAACCTCGCAATCAACTCTTGCAACGATCGGTGATTCCGAGCAAGTTTGGGGGAAATCGATGAAGTTTCCTGGCGATGTTGATGACGTATATGCGGAGGATTGGTTATGTAACGTGAATGATGAATTGATTGAGAGATTTGATGTTTCTGTTGATGAGTTTCAGAGGATTAGGAAGAAAGAGAAGGAAATTGGTAGGTCTGTTGTTGCTGATGATGGAGATGATGGGTTTCAGATGGTTTATGGGAAGAAGAAGAAGCCTGTTGGTAATGTGGTTACTGGCTCGGCAGCGGTTAATGGTGGTGGTTCTGTGATTGATGTTAAGATGGCTGAGAGGGATAAGAATTCATCTGGTAAGGCTAAAGTTCCTTTTCATGTACCAACTATAAAGAAGCCTCAAGAGGAGTATAACATATTGGTGAACAATGCGAATCTACCGTTTGAGCATGTTTGGTTGGAGAGGAGCGAGGATGATCTGCGGGCTATGCATCCTTTGGAGAAATTTTCAGTGCTTGACTTCGTTGACAAAGATGTAAACGAGATGGAACCTGTGAAGCCCCTTCCACTGGAACAGACTCCATTCAAGTTCGTCCAGGAAGTGAAAGATCTGAAAGAATTAGTTGCCAAACTGCGTAGTGTTGAAGAGTTTGCGGTTGATCTGGAGCATAATCAGTATAGATCTTTTCAAGGATTGACATGCTTGATGCAAATTTCCACCAGAACAGAGGATTATATAGTTGATACATTTAAGCTTCGTATTCACATTGGGCCTTATCTAAGGGAGATATTCAAAGACCCTAAAAAGAAAAAGGTAATGCATGGAGCAGATCGAGATATTATCTGGCTTCAACGGGACTTCGGCATATATGTCTGCAATCTCTTTGACACAGGACAGGCCTCCAGGGTTCTAAATTTGGAGAGAAATAGCCTGGAGTTTCTTTTGCAGCATTTTTGTGGAGTGACTGCAAATAAAGAGTACCAAAATGCAGACTGGAGAATAAGACCCCTTCCAGAGGAAATGACAAGATATGCAAGAGAAGATACCCACTACCTCTTATACATATATGATTTAATCAAACTAGAACTGCAGAGAATGGCAAAGGATGACGCGCATACTGACTCTCCTCTACTTGAGGTCTACAAGCGGAGTTACGATGTGTGCACACAACTATATGAGAAAGAGTTATTGACCGAGAATTCATATCTTCACGTATATGGGCTTCAAGCAGCGGGCTTTAATGCAGCTCAACTTGCCATTGTTGCGGGGCTTTGTGAATGGAGGGATTTCATTGCACGTGCGGAGGATGAGAGCACTGGTTATGTATTGCCAAACAAAGTTCTCCTTGAAATAGCCAAGGAGATGCCTGATAGTGTTGGAAAATTGCGTCGGATGTTGAAGTCAAAGCATCCTTATATCGAGCGTAATGTTGATTCGGTGGTCAGTGTCATCAGGCAATCAATGCAACATTATGCAGCATTTGAGTCTGCTGCTCTATCTTTAAAAGATGTGTCTCCTGGAAATGTAATGGATAAGAATATTGAACCTATAAGTGAGAAGAAAGACCTGCACACAGGAGATGTGGCTTCTCCAAGTCTGAAGGAAAATTCTTCGCAGCTTGAGAGTACCAGGGACCTAATTATGGGTGCAGCAAATACTAATGAAGGGAGAGGTTTAGGATCCGGCTTGTTTGGTTCTGCTAAGGTTTCTGCGGCTGTTCGGATCTCTAAGAAACCAAGCAGTGGTTTAGGAGCTTTGCTGGGAAATGCAGCCTCCAAGAAGAAATCTCGAACTGATGAGAAGGTGAAGGAAGATGTGAAGCTCGAACAGATAAGATCATCTGTAAACCTGTCATTCCATTCGTTTACAGAGAAAGTTCCTGACTCAAAGTCAACTTCTGAAACATCTCCGAAAGTTTATGGGAAGCCTGAAGAGATGTCCAGTACTATGCCAGCCTCTGTTTCCAAGGAAGATGGTGTGAAAGAGTTGAAAGATGATTCAGAAGAAGCCTCAGAGATCGTTGGTACTTCTGGTAGAGTTTCAGAGTCCAAAGTGTCTAGCTCCGAGATGGGCGATATTATACTACTAGAAAATGGTGATGAGAAAAAAGTTGACGCTGAAGATGAACCAATGTCTCTCTCGGAGTTGTCCACAAACTTTCAGAAGTGCTTTAAATCCATGAATAAGAGCAAGAAGGCCCAAAAGCAGACCGAGTTTTTAAACATAGAGCCTTTTGATTATGAAGCTGCAAGGAAAGAGGTGAAATTTGGGGAAGGACACAAGGGAAGACAAGGAAAGAGAGAAGCTGCAGCAGGTCAGAAGAAGGGGTCTACACAGGAGCAGTCAGAGTTTGGTCAAGGAAAACGGCGTCAAGCTTTTCCGGCATCCGGGAACCGAAGTATGTCCTTTAAAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000175 GO:0000178 GO:0000460 GO:0000785 GO:0000956 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006364 GO:0006396 GO:0006401 GO:0006402 GO:0006403 GO:0006725 GO:0006807 GO:0007549 GO:0008150 GO:0008152 GO:0008298 GO:0008334 GO:0008408 GO:0009048 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0010639 GO:0016070 GO:0016071 GO:0016072 GO:0016075 GO:0016458 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019219 GO:0019222 GO:0019439 GO:0022613 GO:0031047 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032204 GO:0032205 GO:0032210 GO:0032211 GO:0032259 GO:0032268 GO:0032270 GO:0032879 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0035327 GO:0040029 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043632 GO:0043633 GO:0043634 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044728 GO:0045934 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051246 GO:0051247 GO:0051641 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0071025 GO:0071027 GO:0071028 GO:0071029 GO:0071030 GO:0071033 GO:0071034 GO:0071035 GO:0071043 GO:0071044 GO:0071046 GO:0071048 GO:0071704 GO:0071840 GO:0080090 GO:0080188 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1902275 GO:1902464 GO:1902466 GO:1902494 GO:1904356 GO:1904357 GO:1904872 GO:1905269 GO:1905354 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
DNA_pol_A_exo1 HRDC PMC2NT

Protein Analysis

870

Amino Acids

97.89

Weight (kDa)

5.7

Isoelectric Point (pI)

47.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_pol_A_exo1 PF01612 262 - 428 5.9e-50 3'-5' exonuclease
HRDC PF00570 482 - 549 2.2e-13 HRDC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 24
Acc36I ACCTGC 2 cut(s) 1770, 2498
AccB7I CCANNNNNTGG 1 cut(s) 1937
AccI GTMKAC 3 cut(s) 24, 1335, 2525
AccII CGCG 1 cut(s) 1307
AciI CCGC 9 cut(s) 293, 488, 676, 848, 1342, 1427, 1460, 1496, 1907
AclWI GGATC 3 cut(s) 1869, 1882, 1925
AcsI RAATTY 7 cut(s) 541, 698, 906, 1108, 1393, 1801, 2459
AcuI CTGAAG 3 cut(s) 1814, 2145, 2334
AcvI CACGTG 1 cut(s) 1493
AcyI GRCGYC 2 cut(s) 21, 2563
AfaI GTAC 5 cut(s) 576, 1175, 1822, 2140, 2221
AfiI CCNNNNNNNGG 5 cut(s) 763, 1210, 1837, 1937, 2582
AhdI GACNNNNNGTC 1 cut(s) 2083
AjnI CCWGG 6 cut(s) 268, 789, 1097, 1125, 1711, 1823
AluBI AGCT 9 cut(s) 949, 1442, 1813, 1949, 2017, 2256, 2441, 2501, 2570
AluI AGCT 9 cut(s) 949, 1442, 1813, 1949, 2017, 2256, 2441, 2501, 2570
Alw21I GWGCWC 2 cut(s) 1361, 1511
Alw26I GTCTC 5 cut(s) 43, 60, 97, 1713, 2334
Alw44I GTGCAC 1 cut(s) 1357
AlwI GGATC 3 cut(s) 1869, 1882, 1925
AlwNI CAGNNNCTG 1 cut(s) 2153
Ama87I CYCGRG 1 cut(s) 100
AoxI GGCC 3 cut(s) 965, 1092, 2391
ApaLI GTGCAC 1 cut(s) 1357
ApoI RAATTY 7 cut(s) 541, 698, 906, 1108, 1393, 1801, 2459
ArsI GACNNNNNNTTYG 2 cut(s) 21, 53
AseI ATTAAT 1 cut(s) 68
AspLEI GCGC 1 cut(s) 1309
AspS9I GGNCC 3 cut(s) 965, 1828, 2392
AsuC2I CCSGG 1 cut(s) 2584
AsuHPI GGTGA 6 cut(s) 24, 242, 628, 2011, 2303, 2467
AvaI CYCGRG 1 cut(s) 100
AvaII GGWCC 1 cut(s) 1828
BaeGI GKGCMC 1 cut(s) 1361
BamHI GGATCC 1 cut(s) 1874
BarI GAAGNNNNNNTAC 2 cut(s) 1401, 1433
BbrPI CACGTG 1 cut(s) 1493
BbsI GAAGAC 2 cut(s) 108, 2488
Bbv12I GWGCWC 2 cut(s) 1361, 1511
BccI CCATC 8 cut(s) 68, 407, 416, 427, 517, 733, 2162, 2257
BceAI ACGGC 1 cut(s) 2576
BciT130I CCWGG 6 cut(s) 270, 791, 1099, 1127, 1713, 1825
BcnI CCSGG 1 cut(s) 2584
BcoDI GTCTC 5 cut(s) 43, 60, 97, 1713, 2334
BfaI CTAG 3 cut(s) 1277, 2253, 2282
BfmI CTRYAG 2 cut(s) 1283, 2502
BfuAI ACCTGC 2 cut(s) 1770, 2498
BglII AGATCT 2 cut(s) 802, 875
BmcAI AGTACT 1 cut(s) 2140
Bme1390I CCNGG 7 cut(s) 270, 791, 1099, 1127, 1713, 1825, 2584
Bme18I GGWCC 1 cut(s) 1828
BmeRI GACNNNNNGTC 1 cut(s) 2083
BmeT110I CYCGRG 1 cut(s) 100
BmgT120I GGNCC 3 cut(s) 965, 1828, 2392
BmiI GGNNCC 5 cut(s) 202, 744, 1829, 1876, 2588
BmrFI CCNGG 7 cut(s) 270, 791, 1099, 1127, 1713, 1825, 2584
BmsI GCATC 5 cut(s) 694, 891, 1548, 1612, 2588
BpiI GAAGAC 2 cut(s) 108, 2488
BpmI CTGGAG 5 cut(s) 80, 878, 1081, 1148, 1210
Bpu10I CCTNAGC 1 cut(s) 1896
BpuEI CTTGAG 3 cut(s) 579, 1349, 1835
BpuMI CCSGG 1 cut(s) 2584
Bsa29I ATCGAT 3 cut(s) 72, 186, 257
BsaAI YACGTR 2 cut(s) 1408, 1493
BsaHI GRCGYC 2 cut(s) 21, 2563
BsaJI CCNNGG 4 cut(s) 1098, 1551, 1824, 2160
BsaXI ACNNNNNCTCC 4 cut(s) 287, 317, 1303, 1333
Bsc4I CCNNNNNNNGG 5 cut(s) 763, 1210, 1837, 1937, 2582
Bse1I ACTGG 7 cut(s) 35, 202, 481, 768, 1193, 1516, 2136
Bse3DI GCAATG 1 cut(s) 1485
BseBI CCWGG 6 cut(s) 270, 791, 1099, 1127, 1713, 1825
BseCI ATCGAT 3 cut(s) 72, 186, 257
BseDI CCNNGG 4 cut(s) 1098, 1551, 1824, 2160
BseGI GGATG 7 cut(s) 673, 685, 1306, 1507, 1593, 1603, 2579
BseLI CCNNNNNNNGG 5 cut(s) 763, 1210, 1837, 1937, 2582
BseMI GCAATG 1 cut(s) 1485
BseMII CTCAG 2 cut(s) 519, 2220
BseNI ACTGG 7 cut(s) 35, 202, 481, 768, 1193, 1516, 2136
BseRI GAGGAG 3 cut(s) 614, 673, 1311
BseSI GKGCMC 1 cut(s) 1361
BseYI CCCAGC 1 cut(s) 1954
BsgI GTGCAG 2 cut(s) 1748, 1863
Bsh1236I CGCG 1 cut(s) 1307
Bsh1285I CGRYCG 1 cut(s) 228
BshFI GGCC 3 cut(s) 967, 1094, 2393
BshVI ATCGAT 3 cut(s) 72, 186, 257
BsiEI CGRYCG 1 cut(s) 228
BsiHKAI GWGCWC 2 cut(s) 1361, 1511
BsiHKCI CYCGRG 1 cut(s) 100
BsiSI CCGG 3 cut(s) 1878, 2576, 2583
BslFI GGGAC 2 cut(s) 1064, 1841
BslI CCNNNNNNNGG 5 cut(s) 763, 1210, 1837, 1937, 2582
BsmAI GTCTC 5 cut(s) 43, 60, 97, 1713, 2334
BsmFI GGGAC 2 cut(s) 1064, 1841
BsnI GGCC 3 cut(s) 967, 1094, 2393
BsoBI CYCGRG 1 cut(s) 100
Bsp1286I GDGCHC 2 cut(s) 1361, 1511
BspACI CCGC 9 cut(s) 293, 488, 676, 848, 1342, 1427, 1460, 1496, 1907
BspANI GGCC 3 cut(s) 967, 1094, 2393
BspCNI CTCAG 2 cut(s) 520, 2219
BspDI ATCGAT 3 cut(s) 72, 186, 257
BspFNI CGCG 1 cut(s) 1307
BspLI GGNNCC 5 cut(s) 202, 744, 1829, 1876, 2588
BspMAI CTGCAG 2 cut(s) 1287, 2506
BspMI ACCTGC 2 cut(s) 1770, 2498
BspPI GGATC 3 cut(s) 1869, 1882, 1925
BsrDI GCAATG 1 cut(s) 1485
BsrI ACTGG 7 cut(s) 35, 202, 481, 768, 1193, 1516, 2136
BssECI CCNNGG 4 cut(s) 1098, 1551, 1824, 2160
BssNI GRCGYC 2 cut(s) 21, 2563
BssT1I CCWWGG 2 cut(s) 1551, 2160
Bst2UI CCWGG 6 cut(s) 270, 791, 1099, 1127, 1713, 1825
Bst4CI ACNGT 2 cut(s) 11, 636
Bst6I CTCTTC 3 cut(s) 94, 834, 2121
BstACI GRCGYC 2 cut(s) 21, 2563
BstAPI GCANNNNNTGC 1 cut(s) 1657
BstBAI YACGTR 2 cut(s) 1408, 1493
BstC8I GCNNGC 3 cut(s) 678, 1429, 2148
BstDEI CTNAG 5 cut(s) 528, 974, 1896, 1923, 2206
BstENI CCTNNNNNAGG 1 cut(s) 1208
BstF5I GGATG 7 cut(s) 673, 685, 1306, 1507, 1593, 1603, 2579
BstFNI CGCG 1 cut(s) 1307
BstHHI GCGC 1 cut(s) 1309
BstMAI GTCTC 5 cut(s) 43, 60, 97, 1713, 2334
BstMCI CGRYCG 1 cut(s) 228
BstMWI GCNNNNNNNGC 5 cut(s) 682, 1448, 1457, 1657, 2576
BstNI CCWGG 6 cut(s) 270, 791, 1099, 1127, 1713, 1825
BstNSI RCATGY 2 cut(s) 647, 897
BstSCI CCNGG 7 cut(s) 268, 789, 1097, 1125, 1711, 1823, 2582
BstSFI CTRYAG 2 cut(s) 1283, 2502
BstSLI GKGCMC 1 cut(s) 1361
BstUI CGCG 1 cut(s) 1307
BstV2I GAAGAC 2 cut(s) 108, 2488
BstX2I RGATCY 4 cut(s) 802, 875, 1874, 1917
BstXI CCANNNNNNTGG 1 cut(s) 42
BstYI RGATCY 4 cut(s) 802, 875, 1874, 1917
Bsu15I ATCGAT 3 cut(s) 72, 186, 257
BsuRI GGCC 3 cut(s) 967, 1094, 2393
BsuTUI ATCGAT 3 cut(s) 72, 186, 257
BtgZI GCGATG 1 cut(s) 288
BtsCI GGATG 7 cut(s) 673, 685, 1306, 1507, 1593, 1603, 2579
BtsI GCAGTG 1 cut(s) 1942
BtsIMutI CAGTG 5 cut(s) 711, 761, 1509, 1645, 1942
BveI ACCTGC 2 cut(s) 1770, 2498
Cac8I GCNNGC 3 cut(s) 678, 1429, 2148
CaiI CAGNNNCTG 1 cut(s) 2153
CfoI GCGC 1 cut(s) 1309
Cfr13I GGNCC 3 cut(s) 965, 1828, 2392
ClaI ATCGAT 3 cut(s) 72, 186, 257
CseI GACGC 4 cut(s) 1313, 1571, 2318, 2552
Csp6I GTAC 5 cut(s) 575, 1174, 1821, 2139, 2220
CviAII CATG 6 cut(s) 16, 572, 644, 894, 1016, 2374
CviQI GTAC 5 cut(s) 575, 1174, 1821, 2139, 2220
DdeI CTNAG 5 cut(s) 528, 974, 1896, 1923, 2206
DraI TTTAAA 4 cut(s) 1698, 2368, 2415, 2605
DriI GACNNNNNGTC 1 cut(s) 2083
Eam1104I CTCTTC 3 cut(s) 94, 834, 2121
Eam1105I GACNNNNNGTC 1 cut(s) 2083
EarI CTCTTC 3 cut(s) 94, 834, 2121
Eco130I CCWWGG 2 cut(s) 1551, 2160
Eco147I AGGCCT 1 cut(s) 1094
Eco47I GGWCC 1 cut(s) 1828
Eco57I CTGAAG 3 cut(s) 1814, 2145, 2334
Eco72I CACGTG 1 cut(s) 1493
Eco88I CYCGRG 1 cut(s) 100
EcoNI CCTNNNNNAGG 1 cut(s) 1208
EcoO109I RGGNCCY 1 cut(s) 1828
EcoRI GAATTC 2 cut(s) 541, 1393
EcoRII CCWGG 6 cut(s) 268, 789, 1097, 1125, 1711, 1823
EcoT14I CCWWGG 2 cut(s) 1551, 2160
EcoT22I ATGCAT 2 cut(s) 687, 1017
ErhI CCWWGG 2 cut(s) 1551, 2160
FaeI CATG 6 cut(s) 19, 575, 647, 897, 1019, 2377
FalI AAGNNNNNCTT 2 cut(s) 1524, 1556
FaqI GGGAC 2 cut(s) 1064, 1841
FatI CATG 6 cut(s) 15, 571, 643, 893, 1015, 2373
FauI CCCGC 3 cut(s) 669, 1420, 1453
FblI GTMKAC 3 cut(s) 24, 1335, 2525
FokI GGATG 7 cut(s) 672, 680, 1313, 1514, 1590, 1600, 2566
FspBI CTAG 3 cut(s) 1277, 2253, 2282
GlaI GCGC 1 cut(s) 1308
GsaI CCCAGC 1 cut(s) 1958
GsuI CTGGAG 5 cut(s) 80, 878, 1081, 1148, 1210
HaeIII GGCC 3 cut(s) 967, 1094, 2393
HapII CCGG 3 cut(s) 1878, 2576, 2583
HgaI GACGC 4 cut(s) 1313, 1571, 2318, 2552
HhaI GCGC 1 cut(s) 1309
Hin1I GRCGYC 2 cut(s) 21, 2563
Hin1II CATG 6 cut(s) 19, 575, 647, 897, 1019, 2377
Hin6I GCGC 1 cut(s) 1307
HinP1I GCGC 1 cut(s) 1307
HincII GTYRAC 4 cut(s) 25, 721, 2088, 2308
HindII GTYRAC 4 cut(s) 25, 721, 2088, 2308
HindIII AAGCTT 2 cut(s) 947, 2568
HpaII CCGG 3 cut(s) 1878, 2576, 2583
HphI GGTGA 6 cut(s) 24, 242, 628, 2011, 2303, 2467
Hpy188III TCNNGA 9 cut(s) 59, 100, 102, 596, 857, 1028, 1208, 1983, 2075
Hpy99I CGWCG 4 cut(s) 11, 26, 29, 1587
HpyCH4III ACNGT 2 cut(s) 11, 636
HpyCH4IV ACGT 5 cut(s) 21, 285, 312, 1407, 1492
HpyF10VI GCNNNNNNNGC 5 cut(s) 682, 1448, 1457, 1657, 2576
HpyF3I CTNAG 5 cut(s) 528, 974, 1896, 1923, 2206
HpySE526I ACGT 5 cut(s) 21, 285, 312, 1407, 1492
Hsp92I GRCGYC 2 cut(s) 21, 2563
Hsp92II CATG 6 cut(s) 19, 575, 647, 897, 1019, 2377
HspAI GCGC 1 cut(s) 1307
LmnI GCTCC 6 cut(s) 660, 859, 1019, 1946, 2261, 2533
LweI GCATC 5 cut(s) 694, 891, 1548, 1612, 2588
MaeI CTAG 3 cut(s) 1277, 2253, 2282
MaeII ACGT 5 cut(s) 21, 285, 312, 1407, 1492
MaeIII GTNAC 5 cut(s) 11, 308, 472, 1156, 1346
MflI RGATCY 4 cut(s) 802, 875, 1874, 1917
MhlI GDGCHC 2 cut(s) 1361, 1511
MlyI GAGTC 7 cut(s) 88, 99, 766, 1310, 1688, 2072, 2249
MmeI TCCRAC 4 cut(s) 155, 633, 1552, 1565
Mph1103I ATGCAT 2 cut(s) 687, 1017
MslI CAYNNNNRTG 3 cut(s) 614, 1149, 1410
MspA1I CMGCKG 2 cut(s) 488, 1427
MspI CCGG 3 cut(s) 1878, 2576, 2583
MspR9I CCNGG 7 cut(s) 270, 791, 1099, 1127, 1713, 1825, 2584
MvaI CCWGG 6 cut(s) 270, 791, 1099, 1127, 1713, 1825
MvnI CGCG 1 cut(s) 1307
MwoI GCNNNNNNNGC 5 cut(s) 682, 1448, 1457, 1657, 2576
NciI CCSGG 1 cut(s) 2584
NlaIII CATG 6 cut(s) 19, 575, 647, 897, 1019, 2377
NlaIV GGNNCC 5 cut(s) 202, 744, 1829, 1876, 2588
NmeAIII GCCGAG 1 cut(s) 461
NmuCI GTSAC 1 cut(s) 1156
NsiI ATGCAT 2 cut(s) 687, 1017
NspI RCATGY 2 cut(s) 647, 897
PaeR7I CTCGAG 1 cut(s) 100
PceI AGGCCT 1 cut(s) 1094
PcsI WCGNNNNNNNCGW 2 cut(s) 98, 234
PfeI GAWTC 5 cut(s) 29, 233, 628, 1628, 2192
PflMI CCANNNNNTGG 1 cut(s) 1937
PfoI TCCNGGA 3 cut(s) 789, 1711, 2582
Ple19I CGATCG 1 cut(s) 228
PleI GAGTC 7 cut(s) 88, 99, 766, 1310, 1687, 2072, 2248
PmaCI CACGTG 1 cut(s) 1493
PmlI CACGTG 1 cut(s) 1493
PpsI GAGTC 7 cut(s) 88, 99, 766, 1310, 1687, 2072, 2248
Ppu21I YACGTR 2 cut(s) 1408, 1493
PpuMI RGGWCCY 1 cut(s) 1828
PshBI ATTAAT 1 cut(s) 68
Psp5II RGGWCCY 1 cut(s) 1828
Psp6I CCWGG 6 cut(s) 268, 789, 1097, 1125, 1711, 1823
PspCI CACGTG 1 cut(s) 1493
PspFI CCCAGC 1 cut(s) 1954
PspGI CCWGG 6 cut(s) 268, 789, 1097, 1125, 1711, 1823
PspN4I GGNNCC 5 cut(s) 202, 744, 1829, 1876, 2588
PspPI GGNCC 3 cut(s) 965, 1828, 2392
PspPPI RGGWCCY 1 cut(s) 1828
PstI CTGCAG 2 cut(s) 1287, 2506
PstNI CAGNNNCTG 1 cut(s) 2153
PsuI RGATCY 4 cut(s) 802, 875, 1874, 1917
PvuI CGATCG 1 cut(s) 228
RsaI GTAC 5 cut(s) 576, 1175, 1822, 2140, 2221
RsaNI GTAC 5 cut(s) 575, 1174, 1821, 2139, 2220
RseI CAYNNNNRTG 3 cut(s) 614, 1149, 1410
SalI GTCGAC 1 cut(s) 23
Sau96I GGNCC 3 cut(s) 965, 1828, 2392
ScaI AGTACT 1 cut(s) 2140
SchI GAGTC 7 cut(s) 88, 99, 766, 1310, 1688, 2072, 2249
ScrFI CCNGG 7 cut(s) 270, 791, 1099, 1127, 1713, 1825, 2584
SduI GDGCHC 2 cut(s) 1361, 1511
SfaNI GCATC 5 cut(s) 694, 891, 1548, 1612, 2588
SfcI CTRYAG 2 cut(s) 1283, 2502
Sfr274I CTCGAG 1 cut(s) 100
SgrDI CGTCGACG 1 cut(s) 23
SinI GGWCC 1 cut(s) 1828
SlaI CTCGAG 1 cut(s) 100
SmiMI CAYNNNNRTG 3 cut(s) 614, 1149, 1410
SmlI CTYRAG 4 cut(s) 100, 594, 1328, 1814
SmoI CTYRAG 4 cut(s) 100, 594, 1328, 1814
SseBI AGGCCT 1 cut(s) 1094
SsiI CCGC 9 cut(s) 293, 488, 676, 848, 1342, 1427, 1460, 1496, 1907
SspI AATATT 1 cut(s) 1735
SspMI CTAG 3 cut(s) 1277, 2253, 2282
StuI AGGCCT 1 cut(s) 1094
StyD4I CCNGG 7 cut(s) 268, 789, 1097, 1125, 1711, 1823, 2582
StyI CCWWGG 2 cut(s) 1551, 2160
TaaI ACNGT 2 cut(s) 11, 636
TaiI ACGT 5 cut(s) 24, 288, 315, 1410, 1495
TaqII GACCGA 2 cut(s) 1403, 2420
TatI WGTACW 1 cut(s) 2138
TauI GCSGC 1 cut(s) 1910
TfiI GAWTC 5 cut(s) 29, 233, 628, 1628, 2192
TscAI CASTG 5 cut(s) 711, 768, 1516, 1645, 1942
TseFI GTSAC 1 cut(s) 1156
Tsp45I GTSAC 1 cut(s) 1156
TspRI CASTG 5 cut(s) 711, 768, 1516, 1645, 1942
Van91I CCANNNNNTGG 1 cut(s) 1937
VneI GTGCAC 1 cut(s) 1357
VpaK11BI GGWCC 1 cut(s) 1828
VspI ATTAAT 1 cut(s) 68
XagI CCTNNNNNAGG 1 cut(s) 1208
XapI RAATTY 7 cut(s) 541, 698, 906, 1108, 1393, 1801, 2459
XceI RCATGY 2 cut(s) 647, 897
XhoI CTCGAG 1 cut(s) 100
XmiI GTMKAC 3 cut(s) 24, 1335, 2525
XspI CTAG 3 cut(s) 1277, 2253, 2282
ZraI GACGTC 1 cut(s) 22
ZrmI AGTACT 1 cut(s) 2140
Zsp2I ATGCAT 2 cut(s) 687, 1017
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.