FvH4_1g28500

Exosome component 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0004155
Physical Location & Seq
Forward (+)
20621717 .. 20635138
13422 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g28500.t2

Sequence Viewer

Length: 2469 bp
ATGAACCAAGAGTCTCCTCCACCGCAAAACCTAGCCACCGGCCGTCTCGCATCCTCCGTCTCCAACCTCTCCGACTCCTCGCGGGCCATCCCTTCAAGAGAGGACTTCTATTACTACCGCAATTTCGACGAATTCAAAGTCCCAATTGAAGAAATGGCACGCCAATCCCAGTCCATGCTCCAATCCATCGGCTCCTCCGCAATCTCAGAGATGGCTTTTCCCCAGGAGGATTTGGACGACGCCTATGATTGGCTGGTGAATGTCAACGACGACGTGCTCGAGAGAGTGGACGCGTCGCTGGACGAGTTCAAGAAGAAAGACGAAGAGGGTTTCCAGTTGGTGAGTGGGAAGAAGAAGAAGGACGCCAGGACTATCAGCAAGCCCAAGGTCTCTTTTCACGTGCCCTCTATTCGGAAGCCTCAGGAGGAGTTCAACATTCTGGTTAATAATTCCAACCAGCCATTTGAGCATGTTTGGTTGGAGAGGAGTGACGATGCCCAACGATTTCTTCATCCCCTAGAAAAGCTCTCAGTTCTTGATTTTGTTGGCAATGATGTTGGGGAGGATGAGCCTCTAAAACCGCCGGACTTAGAGGCTACTCCATTTAAATTTGTGGAGGAGGTCAAGGATTTGAAGGAGCTTGCAGCTAAGTTACGCGGGGTTAATGAATTTGCGGTTGATTTGGAGCACAACCAATATCGATCCTTCCAAGGATTGACTTGTTTGATGCAAATTTCTACAAGAACCGAAGATTTTGTAGTAGATACTCTGAAGCTTCGAATTCATATTGGTCCTTACCTTAGGGAAGTTTTCAAGGACCCTTCTAAGAGAAAGGTGATGCATGGAGCAGATCGAGATATTGTGTGGCTCCAACGTGATTTTGGCATTTATATCTGCAATTTGTTTGACACCGGCCAGGCTTCAAGGGTATTGAAATTGGAGAGAAATAGTTTGGAATTTCTTTTGCAACATTATTGTGATGTTTCTGCCAACAAAGAATACCAGAACGCAGACTGGAGATTCCGCCCTCTTACCAAAGAGATGGTCAGATATGCCAGAGAAGATACACACTATCTGTTATACATATATGATTTAATGAGAGCAAAGTTATCTTCCCTGCCAAAGGAATCTGAAAACTCCGATGCTCCTTTAGTAGAGGTTTACAGGCGCAGTTATGATATATGCATGCATCTCTATGAGAAGGAAGTTTTCACTGAGAATTCGTATCTCCACATATATGGGTTGCAAGGTGCTTGTTTTAATTCTCAGCAGCTTGCCATTGTTTCTGGTTTATGTGAGTGGCGTGATGTTGTTGCTCGCACAGAGGATGAAAGTACTGGCTATATATTACCGAACAAAACTCTTCTGGAACTTGCTAAACAGATGCCTGACACAACTAACAAGTTAAGGCGATTGGTGAAATCAAAGCATGCATATATTGAGCAACATCTTGCTTCTGTTGTTAGCGTCATTAGGCACTCTATGCAGAATGCTGCCTTTTTTGAGGCTGCAGCTGAACGTCTGAAGCTGGGATGTTTGGAAATGGCATCTGAAGAAAATGTATTGGATAGTGATATTTCTGAACCCTTACCAGATGAATCTGGACACAATTCAATTAATGATGATGTGTCTGCACCTTTACCAGCTGTCCTGCCTCATAAAGAGGAGTTTACAGAGTATGGATGTGGTGCGTCCAATGGAGACAACATTGTAACAGGAAAAAGCAGGGAAGGAAGTATCATCGGCTGTTCCTTAAAATCTGCAAAGGTTACTGGCGCAACTGTTCAGGTGCAAAAGAAGCCTAGTCGTGCTTTCAGTGCACTCTTGGGGACGGCAGTTCCAAAAAGAAAATTTGATGCTGGTGTAAAGGACAAGGAGGATAATAAGTTGGAGCAGATTAGATCTTCTGTCAACTTCCCATTCCACTCATTCTCAGGTAGTAGGATGGAGCATTCAAATCCTAGGATTGAAGGACCAGGACGAGGTCGTGAGAATCCCCATTCTGAAGTGGCCGTCACTGTATCATCTACCAGGCCGAGTTTGGGAGATTTTATAACATTAGAGAATGTCTCACAAGTACCTGAGCACAAGGAGAATAACTCTGCGGCTTTTGCTTTGGGGTTGGATGGAGAAGATGATCCTATGTCTCTTTCAGAATTGTCCTCAAGCTTCAAAAAATGCTTTCCGCCACATAATCAAAATAGGAAAGCCAGAGAAGTGGAGAAATCCCAGGAATCTGGGGGCTTACAGGTGAAACCTTTTGACTATGAAGCGGCAAGGAAACAGGTCATATTTGAAGAAAAGCCGGCCAAGGACGTTGGAGCTGAGGGAGAAGGCATGAAGAACCTGGGACCAAGGGCTAAGAAAAAAACTGTAGTTGATGGGGATGATGGGTCAAAAGAATTTCCACAAGGGAGACGACGTCAAGCTTTTCCATCAACAGGAAATAGAAGTGCAACTTTCCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000175 GO:0000178 GO:0000460 GO:0000785 GO:0000956 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006364 GO:0006396 GO:0006401 GO:0006402 GO:0006403 GO:0006725 GO:0006807 GO:0007549 GO:0008150 GO:0008152 GO:0008298 GO:0008334 GO:0008408 GO:0009048 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0010639 GO:0016070 GO:0016071 GO:0016072 GO:0016075 GO:0016458 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019219 GO:0019222 GO:0019439 GO:0022613 GO:0031047 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032204 GO:0032205 GO:0032210 GO:0032211 GO:0032259 GO:0032268 GO:0032270 GO:0032879 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0035327 GO:0040029 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043632 GO:0043633 GO:0043634 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044728 GO:0045934 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051246 GO:0051247 GO:0051641 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0071025 GO:0071027 GO:0071028 GO:0071029 GO:0071030 GO:0071033 GO:0071034 GO:0071035 GO:0071043 GO:0071044 GO:0071046 GO:0071048 GO:0071704 GO:0071840 GO:0080090 GO:0080188 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1902275 GO:1902464 GO:1902466 GO:1902494 GO:1904356 GO:1904357 GO:1904872 GO:1905269 GO:1905354 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
DNA_pol_A_exo1 HRDC PMC2NT

Protein Analysis

823

Amino Acids

92.84

Weight (kDa)

5.66

Isoelectric Point (pI)

49.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMC2NT PF08066 26 - 105 4.9e-10 PMC2NT (NUC016) domain
DNA_pol_A_exo1 PF01612 204 - 370 2.5e-47 3'-5' exonuclease
HRDC PF00570 424 - 491 7.1e-14 HRDC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2054
AatII GACGTC 1 cut(s) 2425
AccII CGCG 3 cut(s) 82, 293, 657
AclWI GGATC 2 cut(s) 696, 2132
AcoI YGGCCR 4 cut(s) 40, 913, 2010, 2307
AcsI RAATTY 9 cut(s) 131, 608, 668, 732, 780, 956, 1219, 1850, 2402
AcuI CTGAAG 4 cut(s) 791, 1544, 1572, 2025
AcvI CACGTG 1 cut(s) 400
AcyI GRCGYC 3 cut(s) 240, 363, 2422
AfaI GTAC 2 cut(s) 1336, 2079
AfiI CCNNNNNNNGG 6 cut(s) 249, 411, 1123, 1982, 2042, 2441
AflIII ACRYGT 1 cut(s) 291
AjiI CACGTC 1 cut(s) 274
AjnI CCWGG 7 cut(s) 222, 365, 915, 1975, 2030, 2229, 2346
AjuI GAANNNNNNNTTGG 2 cut(s) 492, 524
Alw21I GWGCWC 4 cut(s) 279, 690, 1822, 2088
Alw26I GTCTC 8 cut(s) 18, 50, 64, 394, 1695, 2074, 2151, 2410
Alw44I GTGCAC 1 cut(s) 1818
AlwI GGATC 2 cut(s) 696, 2132
Ama87I CYCGRG 1 cut(s) 278
AoxI GGCC 6 cut(s) 40, 84, 913, 2010, 2033, 2307
ApaLI GTGCAC 1 cut(s) 1818
ApeKI GCWGC 5 cut(s) 644, 1270, 1493, 1508, 1511
ApoI RAATTY 9 cut(s) 131, 608, 668, 732, 780, 956, 1219, 1850, 2402
ArsI GACNNNNNNTTYG 4 cut(s) 123, 155, 1029, 1061
AseI ATTAAT 1 cut(s) 1617
AspA2I CCTAGG 1 cut(s) 1961
AspLEI GCGC 2 cut(s) 1170, 1778
AspS9I GGNCC 5 cut(s) 84, 791, 817, 1973, 2351
AsuHPI GGTGA 5 cut(s) 268, 352, 847, 1429, 2263
AsuII TTCGAA 1 cut(s) 778
AvaI CYCGRG 1 cut(s) 278
AvaII GGWCC 4 cut(s) 791, 817, 1973, 2351
AvrII CCTAGG 1 cut(s) 1961
AxyI CCTNAGG 2 cut(s) 420, 800
BaeGI GKGCMC 2 cut(s) 405, 1822
BbrPI CACGTG 1 cut(s) 400
Bbv12I GWGCWC 4 cut(s) 279, 690, 1822, 2088
BbvCI CCTCAGC 1 cut(s) 2325
BbvI GCAGC 5 cut(s) 656, 1282, 1480, 1495, 1523
BccI CCATC 9 cut(s) 95, 194, 205, 1036, 1939, 2120, 2375, 2384, 2443
BceAI ACGGC 3 cut(s) 27, 1848, 1997
BciT130I CCWGG 7 cut(s) 224, 367, 917, 1977, 2032, 2231, 2348
BcoDI GTCTC 8 cut(s) 18, 50, 64, 394, 1695, 2074, 2151, 2410
BfaI CTAG 4 cut(s) 32, 518, 1803, 1962
BfmI CTRYAG 2 cut(s) 1509, 2373
BglII AGATCT 1 cut(s) 1901
BisI GCNGC 7 cut(s) 645, 1271, 1494, 1509, 1512, 2106, 2274
BlnI CCTAGG 1 cut(s) 1961
BlsI GCNGC 7 cut(s) 646, 1272, 1495, 1510, 1513, 2107, 2275
BmcAI AGTACT 1 cut(s) 1336
Bme1390I CCNGG 7 cut(s) 224, 367, 917, 1977, 2032, 2231, 2348
Bme18I GGWCC 4 cut(s) 791, 817, 1973, 2351
BmeT110I CYCGRG 1 cut(s) 278
BmgBI CACGTC 1 cut(s) 274
BmgT120I GGNCC 5 cut(s) 84, 791, 817, 1973, 2351
BmiI GGNNCC 4 cut(s) 193, 819, 869, 2352
BmrFI CCNGG 7 cut(s) 224, 367, 917, 1977, 2032, 2231, 2348
BmrI ACTGGG 1 cut(s) 163
BmsI GCATC 9 cut(s) 59, 484, 717, 828, 1132, 1198, 1374, 1556, 1846
BmuI ACTGGG 1 cut(s) 163
BplI GAGNNNNNCTC 4 cut(s) 2054, 2086, 2084, 2116
BpmI CTGGAG 1 cut(s) 1036
Bpu10I CCTNAGC 2 cut(s) 2082, 2325
Bpu14I TTCGAA 1 cut(s) 778
BpuEI CTTGAG 1 cut(s) 2149
Bsa29I ATCGAT 1 cut(s) 700
BsaAI YACGTR 1 cut(s) 400
BsaHI GRCGYC 3 cut(s) 240, 363, 2422
BsaI GGTCTC 1 cut(s) 394
BsaJI CCNNGG 8 cut(s) 222, 384, 709, 1961, 2229, 2310, 2347, 2354
BsaXI ACNNNNNCTCC 2 cut(s) 2407, 2437
Bsc4I CCNNNNNNNGG 6 cut(s) 249, 411, 1123, 1982, 2042, 2441
Bse118I RCCGGY 3 cut(s) 38, 911, 2305
Bse1I ACTGG 5 cut(s) 169, 334, 1019, 1342, 1777
Bse21I CCTNAGG 2 cut(s) 420, 800
Bse3DI GCAATG 1 cut(s) 556
BseBI CCWGG 7 cut(s) 224, 367, 917, 1977, 2032, 2231, 2348
BseCI ATCGAT 1 cut(s) 700
BseDI CCNNGG 8 cut(s) 222, 384, 709, 1961, 2229, 2310, 2347, 2354
BseLI CCNNNNNNNGG 6 cut(s) 249, 411, 1123, 1982, 2042, 2441
BseMI GCAATG 1 cut(s) 556
BseMII CTCAG 8 cut(s) 219, 434, 543, 1206, 1280, 1947, 2073, 2316
BseNI ACTGG 5 cut(s) 169, 334, 1019, 1342, 1777
BseRI GAGGAG 7 cut(s) 6, 67, 184, 440, 499, 632, 1679
BseSI GKGCMC 2 cut(s) 405, 1822
BseX3I CGGCCG 1 cut(s) 40
BseXI GCAGC 5 cut(s) 656, 1282, 1480, 1495, 1523
BseYI CCCAGC 1 cut(s) 1528
BsgI GTGCAG 1 cut(s) 1617
Bsh1236I CGCG 3 cut(s) 82, 293, 657
Bsh1285I CGRYCG 1 cut(s) 43
BshFI GGCC 6 cut(s) 42, 86, 915, 2012, 2035, 2309
BshVI ATCGAT 1 cut(s) 700
BsiEI CGRYCG 1 cut(s) 43
BsiHKAI GWGCWC 4 cut(s) 279, 690, 1822, 2088
BsiHKCI CYCGRG 1 cut(s) 278
BsiSI CCGG 4 cut(s) 39, 584, 912, 2306
BslFI GGGAC 3 cut(s) 125, 1843, 2364
BslI CCNNNNNNNGG 6 cut(s) 249, 411, 1123, 1982, 2042, 2441
BsmAI GTCTC 8 cut(s) 18, 50, 64, 394, 1695, 2074, 2151, 2410
BsmBI CGTCTC 3 cut(s) 50, 64, 2410
BsmFI GGGAC 3 cut(s) 125, 1843, 2364
BsmI GAATGC 2 cut(s) 1495, 1951
BsnI GGCC 6 cut(s) 42, 86, 915, 2012, 2035, 2309
Bso31I GGTCTC 1 cut(s) 394
BsoBI CYCGRG 1 cut(s) 278
Bsp119I TTCGAA 1 cut(s) 778
Bsp1286I GDGCHC 5 cut(s) 279, 405, 690, 1822, 2088
Bsp143I GATC 4 cut(s) 701, 850, 1901, 2137
BspANI GGCC 6 cut(s) 42, 86, 915, 2012, 2035, 2309
BspCNI CTCAG 8 cut(s) 218, 433, 542, 1207, 1279, 1946, 2074, 2317
BspDI ATCGAT 1 cut(s) 700
BspFNI CGCG 3 cut(s) 82, 293, 657
BspLI GGNNCC 4 cut(s) 193, 819, 869, 2352
BspMAI CTGCAG 1 cut(s) 1513
BspPI GGATC 2 cut(s) 696, 2132
BspT104I TTCGAA 1 cut(s) 778
BspTNI GGTCTC 1 cut(s) 394
BsrDI GCAATG 1 cut(s) 556
BsrFI RCCGGY 3 cut(s) 38, 911, 2305
BsrI ACTGG 5 cut(s) 169, 334, 1019, 1342, 1777
BssAI RCCGGY 3 cut(s) 38, 911, 2305
BssECI CCNNGG 8 cut(s) 222, 384, 709, 1961, 2229, 2310, 2347, 2354
BssMI GATC 4 cut(s) 701, 850, 1901, 2137
BssNI GRCGYC 3 cut(s) 240, 363, 2422
BssT1I CCWWGG 5 cut(s) 384, 709, 1961, 2310, 2354
Bst2UI CCWGG 7 cut(s) 224, 367, 917, 1977, 2032, 2231, 2348
Bst4CI ACNGT 3 cut(s) 1783, 2020, 2374
Bst6I CTCTTC 2 cut(s) 318, 1368
BstACI GRCGYC 3 cut(s) 240, 363, 2422
BstAPI GCANNNNNTGC 1 cut(s) 1483
BstBAI YACGTR 1 cut(s) 400
BstBI TTCGAA 1 cut(s) 778
BstC8I GCNNGC 9 cut(s) 84, 160, 380, 642, 1187, 1275, 1318, 1431, 2307
BstENI CCTNNNNNAGG 1 cut(s) 1121
BstFNI CGCG 3 cut(s) 82, 293, 657
BstHHI GCGC 2 cut(s) 1170, 1778
BstKTI GATC 4 cut(s) 704, 853, 1904, 2140
BstMAI GTCTC 8 cut(s) 18, 50, 64, 394, 1695, 2074, 2151, 2410
BstMBI GATC 4 cut(s) 701, 850, 1901, 2137
BstMCI CGRYCG 1 cut(s) 43
BstMWI GCNNNNNNNGC 5 cut(s) 466, 1483, 1798, 1817, 2111
BstNI CCWGG 7 cut(s) 224, 367, 917, 1977, 2032, 2231, 2348
BstNSI RCATGY 3 cut(s) 473, 1189, 1433
BstSCI CCNGG 7 cut(s) 222, 365, 915, 1975, 2030, 2229, 2346
BstSFI CTRYAG 2 cut(s) 1509, 2373
BstSLI GKGCMC 2 cut(s) 405, 1822
BstUI CGCG 3 cut(s) 82, 293, 657
BstV1I GCAGC 5 cut(s) 656, 1282, 1480, 1495, 1523
BstX2I RGATCY 1 cut(s) 1901
BstXI CCANNNNNNTGG 4 cut(s) 1042, 1238, 2218, 2237
BstYI RGATCY 1 cut(s) 1901
BstZI CGGCCG 1 cut(s) 40
Bsu15I ATCGAT 1 cut(s) 700
Bsu36I CCTNAGG 2 cut(s) 420, 800
BsuRI GGCC 6 cut(s) 42, 86, 915, 2012, 2035, 2309
BsuTUI ATCGAT 1 cut(s) 700
BtrI CACGTC 1 cut(s) 274
BtsIMutI CAGTG 3 cut(s) 1212, 1822, 2016
Cac8I GCNNGC 9 cut(s) 84, 160, 380, 642, 1187, 1275, 1318, 1431, 2307
CfoI GCGC 2 cut(s) 1170, 1778
Cfr10I RCCGGY 3 cut(s) 38, 911, 2305
Cfr13I GGNCC 5 cut(s) 84, 791, 817, 1973, 2351
ClaI ATCGAT 1 cut(s) 700
CseI GACGC 6 cut(s) 248, 282, 299, 371, 1456, 1680
Csp6I GTAC 2 cut(s) 1335, 2078
CviAII CATG 6 cut(s) 175, 470, 842, 1186, 1430, 2338
CviQI GTAC 2 cut(s) 1335, 2078
DpnI GATC 4 cut(s) 703, 852, 1903, 2139
DpnII GATC 4 cut(s) 701, 850, 1901, 2137
DraI TTTAAA 1 cut(s) 607
EaeI YGGCCR 4 cut(s) 40, 913, 2010, 2307
EagI CGGCCG 1 cut(s) 40
Eam1104I CTCTTC 2 cut(s) 318, 1368
EarI CTCTTC 2 cut(s) 318, 1368
EciI GGCGGA 2 cut(s) 1013, 2175
EclXI CGGCCG 1 cut(s) 40
Eco130I CCWWGG 5 cut(s) 384, 709, 1961, 2310, 2354
Eco31I GGTCTC 1 cut(s) 394
Eco47I GGWCC 4 cut(s) 791, 817, 1973, 2351
Eco52I CGGCCG 1 cut(s) 40
Eco57I CTGAAG 4 cut(s) 791, 1544, 1572, 2025
Eco72I CACGTG 1 cut(s) 400
Eco81I CCTNAGG 2 cut(s) 420, 800
Eco88I CYCGRG 1 cut(s) 278
EcoNI CCTNNNNNAGG 1 cut(s) 1121
EcoO109I RGGNCCY 1 cut(s) 817
EcoRI GAATTC 3 cut(s) 131, 780, 1219
EcoRII CCWGG 7 cut(s) 222, 365, 915, 1975, 2030, 2229, 2346
EcoT14I CCWWGG 5 cut(s) 384, 709, 1961, 2310, 2354
EcoT22I ATGCAT 4 cut(s) 843, 1187, 1191, 1435
ErhI CCWWGG 5 cut(s) 384, 709, 1961, 2310, 2354
Esp3I CGTCTC 3 cut(s) 50, 64, 2410
FaeI CATG 6 cut(s) 178, 473, 845, 1189, 1433, 2341
FalI AAGNNNNNCTT 1 cut(s) 2443
FaqI GGGAC 3 cut(s) 125, 1843, 2364
FatI CATG 6 cut(s) 174, 469, 841, 1185, 1429, 2337
FauI CCCGC 2 cut(s) 75, 650
Fnu4HI GCNGC 7 cut(s) 645, 1271, 1494, 1509, 1512, 2106, 2274
Fsp4HI GCNGC 7 cut(s) 645, 1271, 1494, 1509, 1512, 2106, 2274
FspBI CTAG 4 cut(s) 32, 518, 1803, 1962
GlaI GCGC 2 cut(s) 1169, 1777
GluI GCNGC 7 cut(s) 645, 1271, 1494, 1509, 1512, 2106, 2274
GsaI CCCAGC 1 cut(s) 1532
GsuI CTGGAG 1 cut(s) 1036
HaeIII GGCC 6 cut(s) 42, 86, 915, 2012, 2035, 2309
HapII CCGG 4 cut(s) 39, 584, 912, 2306
HgaI GACGC 6 cut(s) 248, 282, 299, 371, 1456, 1680
HhaI GCGC 2 cut(s) 1170, 1778
Hin1I GRCGYC 3 cut(s) 240, 363, 2422
Hin1II CATG 6 cut(s) 178, 473, 845, 1189, 1433, 2341
Hin6I GCGC 2 cut(s) 1168, 1776
HinP1I GCGC 2 cut(s) 1168, 1776
HincII GTYRAC 2 cut(s) 265, 1912
HindII GTYRAC 2 cut(s) 265, 1912
HindIII AAGCTT 3 cut(s) 773, 2167, 2427
HinfI GANTC 7 cut(s) 11, 74, 1020, 1127, 1598, 1993, 2234
HpaII CCGG 4 cut(s) 39, 584, 912, 2306
HphI GGTGA 5 cut(s) 268, 352, 847, 1429, 2263
Hpy166II GTNNAC 6 cut(s) 265, 289, 1162, 1671, 1820, 1912
Hpy188III TCNNGA 9 cut(s) 96, 280, 310, 422, 536, 854, 1367, 1602, 1988
Hpy8I GTNNAC 6 cut(s) 265, 289, 1162, 1671, 1820, 1912
Hpy99I CGWCG 6 cut(s) 131, 242, 272, 275, 298, 2424
HpyAV CCTTC 9 cut(s) 102, 352, 628, 715, 831, 1195, 1724, 1964, 2327
HpyCH4III ACNGT 3 cut(s) 1783, 2020, 2374
HpyCH4IV ACGT 6 cut(s) 273, 399, 874, 1519, 2316, 2422
HpyF10VI GCNNNNNNNGC 5 cut(s) 466, 1483, 1798, 1817, 2111
HpySE526I ACGT 6 cut(s) 273, 399, 874, 1519, 2316, 2422
Hsp92I GRCGYC 3 cut(s) 240, 363, 2422
Hsp92II CATG 6 cut(s) 178, 473, 845, 1189, 1433, 2341
HspAI GCGC 2 cut(s) 1168, 1776
KroI GCCGGC 1 cut(s) 2305
KroNI GCCGGC 1 cut(s) 2307
Kzo9I GATC 4 cut(s) 701, 850, 1901, 2137
Lsp1109I GCAGC 5 cut(s) 656, 1282, 1480, 1495, 1523
LweI GCATC 9 cut(s) 59, 484, 717, 828, 1132, 1198, 1374, 1556, 1846
MaeI CTAG 4 cut(s) 32, 518, 1803, 1962
MaeII ACGT 6 cut(s) 273, 399, 874, 1519, 2316, 2422
MaeIII GTNAC 5 cut(s) 488, 651, 1711, 1768, 2014
MalI GATC 4 cut(s) 703, 852, 1903, 2139
MboI GATC 4 cut(s) 701, 850, 1901, 2137
MfeI CAATTG 1 cut(s) 144
MflI RGATCY 1 cut(s) 1901
MhlI GDGCHC 5 cut(s) 279, 405, 690, 1822, 2088
MluI ACGCGT 1 cut(s) 291
MlyI GAGTC 2 cut(s) 20, 68
MmeI TCCRAC 8 cut(s) 87, 96, 459, 477, 895, 1869, 2103, 2299
Mph1103I ATGCAT 4 cut(s) 843, 1187, 1191, 1435
MroNI GCCGGC 1 cut(s) 2305
MseI TTAA 8 cut(s) 444, 606, 663, 1094, 1260, 1406, 1617, 1754
MslI CAYNNNNRTG 3 cut(s) 975, 1194, 1236
MspA1I CMGCKG 2 cut(s) 1514, 1646
MspI CCGG 4 cut(s) 39, 584, 912, 2306
MspR9I CCNGG 7 cut(s) 224, 367, 917, 1977, 2032, 2231, 2348
MunI CAATTG 1 cut(s) 144
Mva1269I GAATGC 2 cut(s) 1495, 1951
MvaI CCWGG 7 cut(s) 224, 367, 917, 1977, 2032, 2231, 2348
MvnI CGCG 3 cut(s) 82, 293, 657
MwoI GCNNNNNNNGC 5 cut(s) 466, 1483, 1798, 1817, 2111
NaeI GCCGGC 1 cut(s) 2307
NdeII GATC 4 cut(s) 701, 850, 1901, 2137
NgoMIV GCCGGC 1 cut(s) 2305
NlaIII CATG 6 cut(s) 178, 473, 845, 1189, 1433, 2341
NlaIV GGNNCC 4 cut(s) 193, 819, 869, 2352
NmeAIII GCCGAG 1 cut(s) 2061
NmuCI GTSAC 2 cut(s) 488, 2014
NsiI ATGCAT 4 cut(s) 843, 1187, 1191, 1435
NspI RCATGY 3 cut(s) 473, 1189, 1433
NspV TTCGAA 1 cut(s) 778
PaeI GCATGC 2 cut(s) 1189, 1433
PaeR7I CTCGAG 1 cut(s) 278
PcsI WCGNNNNNNNCGW 2 cut(s) 54, 276
PctI GAATGC 2 cut(s) 1495, 1951
PdiI GCCGGC 1 cut(s) 2307
PfeI GAWTC 5 cut(s) 1020, 1127, 1598, 1993, 2234
PflFI GACNNNGTC 2 cut(s) 1983, 2421
PkrI GCNGC 7 cut(s) 646, 1272, 1495, 1510, 1513, 2107, 2275
PleI GAGTC 2 cut(s) 19, 68
PmaCI CACGTG 1 cut(s) 400
PmlI CACGTG 1 cut(s) 400
PpsI GAGTC 2 cut(s) 19, 68
Ppu21I YACGTR 1 cut(s) 400
PpuMI RGGWCCY 1 cut(s) 817
PshBI ATTAAT 1 cut(s) 1617
PsiI TTATAA 1 cut(s) 2054
Psp5II RGGWCCY 1 cut(s) 817
Psp6I CCWGG 7 cut(s) 222, 365, 915, 1975, 2030, 2229, 2346
PspCI CACGTG 1 cut(s) 400
PspFI CCCAGC 1 cut(s) 1528
PspGI CCWGG 7 cut(s) 222, 365, 915, 1975, 2030, 2229, 2346
PspN4I GGNNCC 4 cut(s) 193, 819, 869, 2352
PspPI GGNCC 5 cut(s) 84, 791, 817, 1973, 2351
PspPPI RGGWCCY 1 cut(s) 817
PstI CTGCAG 1 cut(s) 1513
PsuI RGATCY 1 cut(s) 1901
PsyI GACNNNGTC 2 cut(s) 1983, 2421
PvuII CAGCTG 2 cut(s) 1514, 1646
RsaI GTAC 2 cut(s) 1336, 2079
RsaNI GTAC 2 cut(s) 1335, 2078
RseI CAYNNNNRTG 3 cut(s) 975, 1194, 1236
SaqAI TTAA 8 cut(s) 444, 606, 663, 1094, 1260, 1406, 1617, 1754
SatI GCNGC 7 cut(s) 645, 1271, 1494, 1509, 1512, 2106, 2274
Sau3AI GATC 4 cut(s) 701, 850, 1901, 2137
Sau96I GGNCC 5 cut(s) 84, 791, 817, 1973, 2351
ScaI AGTACT 1 cut(s) 1336
SchI GAGTC 2 cut(s) 20, 68
ScrFI CCNGG 7 cut(s) 224, 367, 917, 1977, 2032, 2231, 2348
SduI GDGCHC 5 cut(s) 279, 405, 690, 1822, 2088
SfaNI GCATC 9 cut(s) 59, 484, 717, 828, 1132, 1198, 1374, 1556, 1846
SfcI CTRYAG 2 cut(s) 1509, 2373
Sfr274I CTCGAG 1 cut(s) 278
SfuI TTCGAA 1 cut(s) 778
SinI GGWCC 4 cut(s) 791, 817, 1973, 2351
SlaI CTCGAG 1 cut(s) 278
SmiI ATTTAAAT 1 cut(s) 607
SmiMI CAYNNNNRTG 3 cut(s) 975, 1194, 1236
SmlI CTYRAG 2 cut(s) 278, 2164
SmoI CTYRAG 2 cut(s) 278, 2164
SphI GCATGC 2 cut(s) 1189, 1433
SspMI CTAG 4 cut(s) 32, 518, 1803, 1962
StyD4I CCNGG 7 cut(s) 222, 365, 915, 1975, 2030, 2229, 2346
StyI CCWWGG 5 cut(s) 384, 709, 1961, 2310, 2354
SwaI ATTTAAAT 1 cut(s) 607
TaaI ACNGT 3 cut(s) 1783, 2020, 2374
TaiI ACGT 6 cut(s) 276, 402, 877, 1522, 2319, 2425
TaqI TCGA 5 cut(s) 126, 279, 700, 778, 853
TatI WGTACW 1 cut(s) 1334
TauI GCSGC 2 cut(s) 2108, 2276
TfiI GAWTC 5 cut(s) 1020, 1127, 1598, 1993, 2234
Tru1I TTAA 8 cut(s) 444, 606, 663, 1094, 1260, 1406, 1617, 1754
Tru9I TTAA 8 cut(s) 444, 606, 663, 1094, 1260, 1406, 1617, 1754
TscAI CASTG 3 cut(s) 1219, 1822, 2023
TseFI GTSAC 2 cut(s) 488, 2014
TseI GCWGC 5 cut(s) 644, 1270, 1493, 1508, 1511
Tsp45I GTSAC 2 cut(s) 488, 2014
TspDTI ATGAA 8 cut(s) 17, 500, 681, 773, 1344, 1611, 2283, 2354
TspGWI ACGGA 2 cut(s) 46, 2453
TspRI CASTG 3 cut(s) 1219, 1822, 2023
Tth111I GACNNNGTC 2 cut(s) 1983, 2421
VneI GTGCAC 1 cut(s) 1818
VpaK11BI GGWCC 4 cut(s) 791, 817, 1973, 2351
VspI ATTAAT 1 cut(s) 1617
XagI CCTNNNNNAGG 1 cut(s) 1121
XapI RAATTY 9 cut(s) 131, 608, 668, 732, 780, 956, 1219, 1850, 2402
XceI RCATGY 3 cut(s) 473, 1189, 1433
XcmI CCANNNNNNNNNTGG 3 cut(s) 341, 878, 2038
XhoI CTCGAG 1 cut(s) 278
XmaJI CCTAGG 1 cut(s) 1961
XspI CTAG 4 cut(s) 32, 518, 1803, 1962
ZraI GACGTC 1 cut(s) 2423
ZrmI AGTACT 1 cut(s) 1336
Zsp2I ATGCAT 4 cut(s) 843, 1187, 1191, 1435
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.