Rh3DG364500

Exosome component 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0004155
Physical Location & Seq
Reverse (-)
45480459 .. 45489029
8571 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG364500.1

Sequence Viewer

Length: 1989 bp
ATGATAAAGGCAAAGCTCTCAGTTCTTGATTTTATTGACGATGATATTGGCGGGGTTGAGCCTGTAAAACCGCCAGAAATAGAGGCTACCCCATTCAAGCTTGTGGAGGAGGTCAAAGATCTCAAGGAGCTGGCAGCTAAGTTGCGTGGCGTTAATGAATTTGCGGTTGATTTGGAGCACAACCAATATCGATCCTTCCAAGGATTGACTTGTTTGATGCAAATTTCTACAAGAACTGAAGATTTTATAGTAGATACTTTGAAGCTTAGAATTCATATCGGTCCATATCTTAGGGAAGTTTTCAAGGACCCTTCTAAGAGAAAGGTGATGCATGGAGCAGATCGAGATATTGTGTGGCTCCAACGTGATTTTGGCATTTATATCTGCAATTTGTTTGACACCGGCCAGGCCTCAAGGGTATTGAAATTGGAGAGAAATAGTTTGGAATATCTTTTGCATCACTTTTGTGATGTTTCTGCCAACAAAGAATACCAGAATGCAGACTGGAGATTCCGCCCTCTTACCAAAGAGATGGTCAGATATGCCAGAGAAGATACACACTACCTGTTACACATATATGATTTAATGAGAGCGAAGTTATCTTCCATGCCAAAGGAATCTGAAAACTCTGATGCTCCTTTAGTAGAGGTTTACAGGCGCAGTTATGATATATGCATGCATCTCTATGAGAAGGAAGTTTTCACTGAGAATTCCTATCTCCACATATATGGGTTGCAGGGTGCTTGTTTTAATTCTCAGCAGCTTGCCGTTGTTTCCGGTTTATATGAGTGGCGGGATGTTGTTGCTCGTACAGAGGATGAAAGTACTGGCTATATATTACCAAACAAAACTCTACTCGAACTTGCTAAACAGATGCCTGACACAACTAACAAGTTAAGACGATTGGTGAAATCAAAGCATTCATACATTGAGCAGCATCTTTCTTCTGTTGTTAGCGTCATTAGGCACTCTATGCAGAATGCTGCCTTTTTTGAGGCTGCAGCCGAACATCTGAAGGTGGGACGTGTGGAAATGGCATCTGAAGAAAATGTGTTGGTCAGTGATCGATCTGAACCCTTACCAGATGAATCTGGATGCAATTCAATTAATGGTGATGTATCTGCACCTTCACCAGGTGCTCCGCCTCATAAAGAGGAGTTTAGAGAGCATGGATGTGGTGCCTCCAATGGAGAAGGAAATGTTGGATTTGAAGTTCATCCTAGAGACAACATTGTTACAGGGAAAAGCAGGAAAGGAAGTAGCATTGGCTGTTCCTTAGAATCTGCAAAGGTTACTGGAGCAACTGTTCAGGTGCAAAAGAAGCCTAGTCGTGCTTTCAGTGCACTCTTGGGGACTGCAGTTCCAAAAAGAAAATTTGATGCTGGTGTAAAGGACAAGGAAGATAGTAAGTTGGAGCTGATTAGATCTTCAGTCAGTTTCCCATTCCACTCATTCTCAGGTGGGATGGAGCAATCAAATCCCAAGATTGAAGAACCAGGAAAAGGTTCTGAAAATCCCCATTCTGAAATGCCCGTTACTGTATCACCTACCAGGCGGAGCTTAGGAGATATTATAACATTAGAAAATGATTCACATGTACCTGAGCACAAGGAGGATAACTCGGTGGCATCTGCTTTAGGCATGGATGGAGAAGATGATCCTATGTCTCTCTCAGAGTTGTCCTCAAGCTTCAAGAAATGCTTTCCGCCGCCTAATCAAAATAGGAAAGCCAGAGAACTGGAGAAATCCCAGGAATCTGGTGGCTTGCAGGTGAAACCTTTTGACTATGAAGCGGCAAGGAGACAGGTCATATTTGGAGAAAAGACAGCCAAGGACGCCAGAGCTGGGGGAGAAGGCATGAAGAGCCTGGGTTCAAGGGCTAAGAAAAAAACTCTAGTTGATGGGGATGATGGGTCAAAAGAGCTACCACAAGGGAGACGACGTCAAGCTTTTCCAGCAACAGGAAATAGAAGTGCAACTTTCCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000175 GO:0000178 GO:0000460 GO:0000785 GO:0000956 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006364 GO:0006396 GO:0006401 GO:0006402 GO:0006403 GO:0006725 GO:0006807 GO:0007549 GO:0008150 GO:0008152 GO:0008298 GO:0008334 GO:0008408 GO:0009048 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0010639 GO:0016070 GO:0016071 GO:0016072 GO:0016075 GO:0016458 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019219 GO:0019222 GO:0019439 GO:0022613 GO:0031047 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032204 GO:0032205 GO:0032210 GO:0032211 GO:0032259 GO:0032268 GO:0032270 GO:0032879 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0035327 GO:0040029 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043632 GO:0043633 GO:0043634 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044728 GO:0045934 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051246 GO:0051247 GO:0051641 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0071025 GO:0071027 GO:0071028 GO:0071029 GO:0071030 GO:0071033 GO:0071034 GO:0071035 GO:0071043 GO:0071044 GO:0071046 GO:0071048 GO:0071704 GO:0071840 GO:0080090 GO:0080188 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1902275 GO:1902464 GO:1902466 GO:1902494 GO:1904356 GO:1904357 GO:1904872 GO:1905269 GO:1905354 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
DNA_pol_A_exo1 HRDC PMC2NT

Protein Analysis

662

Amino Acids

74.06

Weight (kDa)

6.41

Isoelectric Point (pI)

50.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_pol_A_exo1 PF01612 35 - 200 4.1e-47 3'-5' exonuclease
HRDC PF00570 254 - 321 6.8e-14 HRDC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1574
AarI CACCTGC 1 cut(s) 1759
AatII GACGTC 1 cut(s) 1945
Acc36I ACCTGC 1 cut(s) 1759
AccB1I GGYRCC 1 cut(s) 1178
AclWI GGATC 2 cut(s) 186, 1652
AcoI YGGCCR 1 cut(s) 403
AcsI RAATTY 5 cut(s) 158, 222, 270, 709, 1373
AcuI CTGAAG 4 cut(s) 258, 1034, 1062, 1413
AcyI GRCGYC 2 cut(s) 1836, 1942
AdeI CACNNNGTG 1 cut(s) 1136
AfaI GTAC 3 cut(s) 811, 826, 1599
AfiI CCNNNNNNNGG 4 cut(s) 1133, 1502, 1845, 1961
AflIII ACRYGT 2 cut(s) 1024, 1594
AgsI TTSAA 9 cut(s) 97, 262, 304, 424, 1104, 1211, 1490, 1693, 1875
AjiI CACGTC 1 cut(s) 1025
AjnI CCWGG 6 cut(s) 405, 1132, 1495, 1550, 1749, 1866
AjuI GAANNNNNNNTTGG 2 cut(s) 1185, 1217
AleI CACNNNNGTG 1 cut(s) 465
AloI GAACNNNNNNTCC 4 cut(s) 1197, 1229, 1290, 1322
Alw21I GWGCWC 4 cut(s) 180, 1141, 1345, 1608
Alw26I GTCTC 4 cut(s) 1218, 1671, 1795, 1930
Alw44I GTGCAC 1 cut(s) 1341
AlwI GGATC 2 cut(s) 186, 1652
AoxI GGCC 2 cut(s) 403, 408
ApaLI GTGCAC 1 cut(s) 1341
ApeKI GCWGC 6 cut(s) 134, 760, 934, 983, 998, 1001
ApoI RAATTY 5 cut(s) 158, 222, 270, 709, 1373
ArsI GACNNNNNNTTYG 2 cut(s) 519, 551
AseI ATTAAT 1 cut(s) 1107
Asp700I GAANNNNTTC 1 cut(s) 1504
AspLEI GCGC 1 cut(s) 660
AspS9I GGNCC 2 cut(s) 281, 307
AsuHPI GGTGA 6 cut(s) 337, 919, 1122, 1124, 1536, 1783
AvaII GGWCC 2 cut(s) 281, 307
BaeGI GKGCMC 1 cut(s) 1345
BanI GGYRCC 1 cut(s) 1178
Bbv12I GWGCWC 4 cut(s) 180, 1141, 1345, 1608
BbvI GCAGC 6 cut(s) 146, 772, 946, 970, 985, 1013
BccI CCATC 5 cut(s) 526, 1459, 1640, 1895, 1904
BceAI ACGGC 1 cut(s) 752
BciT130I CCWGG 6 cut(s) 407, 1134, 1497, 1552, 1751, 1868
BcoDI GTCTC 4 cut(s) 1218, 1671, 1795, 1930
BfaI CTAG 3 cut(s) 1221, 1326, 1895
BfmI CTRYAG 2 cut(s) 999, 1356
BfuAI ACCTGC 1 cut(s) 1759
BglII AGATCT 2 cut(s) 118, 1424
BisI GCNGC 8 cut(s) 135, 761, 935, 984, 999, 1002, 1709, 1794
BlsI GCNGC 8 cut(s) 136, 762, 936, 985, 1000, 1003, 1710, 1795
BmcAI AGTACT 1 cut(s) 826
Bme1390I CCNGG 6 cut(s) 407, 1134, 1497, 1552, 1751, 1868
Bme18I GGWCC 2 cut(s) 281, 307
BmgBI CACGTC 1 cut(s) 1025
BmgT120I GGNCC 2 cut(s) 281, 307
BmiI GGNNCC 3 cut(s) 309, 359, 1180
BmrFI CCNGG 6 cut(s) 407, 1134, 1497, 1552, 1751, 1868
BplI GAGNNNNNCTC 4 cut(s) 1604, 1636, 1667, 1699
BpmI CTGGAG 3 cut(s) 526, 1317, 1760
Bpu10I CCTNAGC 2 cut(s) 1561, 1602
BpuEI CTTGAG 3 cut(s) 107, 397, 1669
Bsa29I ATCGAT 2 cut(s) 190, 1066
BsaHI GRCGYC 2 cut(s) 1836, 1942
BsaJI CCNNGG 4 cut(s) 199, 1749, 1830, 1867
BsaWI WCCGGW 1 cut(s) 776
BsaXI ACNNNNNCTCC 4 cut(s) 1290, 1320, 1927, 1957
Bsc4I CCNNNNNNNGG 4 cut(s) 1133, 1502, 1845, 1961
Bse118I RCCGGY 1 cut(s) 401
Bse1I ACTGG 4 cut(s) 509, 832, 1300, 1743
BseBI CCWGG 6 cut(s) 407, 1134, 1497, 1552, 1751, 1868
BseCI ATCGAT 2 cut(s) 190, 1066
BseDI CCNNGG 4 cut(s) 199, 1749, 1830, 1867
BseGI GGATG 8 cut(s) 802, 823, 1100, 1178, 1216, 1470, 1651, 1912
BseLI CCNNNNNNNGG 4 cut(s) 1133, 1502, 1845, 1961
BseMII CTCAG 6 cut(s) 33, 696, 770, 1470, 1593, 1686
BseNI ACTGG 4 cut(s) 509, 832, 1300, 1743
BseRI GAGGAG 2 cut(s) 122, 1169
BseSI GKGCMC 1 cut(s) 1345
BseXI GCAGC 6 cut(s) 146, 772, 946, 970, 985, 1013
BseYI CCCAGC 1 cut(s) 1844
BsgI GTGCAG 1 cut(s) 1107
BshFI GGCC 2 cut(s) 405, 410
BshNI GGYRCC 1 cut(s) 1178
BshVI ATCGAT 2 cut(s) 190, 1066
BsiHKAI GWGCWC 4 cut(s) 180, 1141, 1345, 1608
BsiSI CCGG 2 cut(s) 402, 777
BslFI GGGAC 2 cut(s) 1035, 1366
BslI CCNNNNNNNGG 4 cut(s) 1133, 1502, 1845, 1961
BsmAI GTCTC 4 cut(s) 1218, 1671, 1795, 1930
BsmBI CGTCTC 1 cut(s) 1930
BsmFI GGGAC 2 cut(s) 1035, 1366
BsmI GAATGC 3 cut(s) 502, 919, 985
BsnI GGCC 2 cut(s) 405, 410
Bsp1286I GDGCHC 4 cut(s) 180, 1141, 1345, 1608
Bsp143I GATC 7 cut(s) 118, 191, 340, 1063, 1067, 1424, 1657
BspANI GGCC 2 cut(s) 405, 410
BspCNI CTCAG 6 cut(s) 32, 697, 769, 1469, 1594, 1685
BspDI ATCGAT 2 cut(s) 190, 1066
BspLI GGNNCC 3 cut(s) 309, 359, 1180
BspMAI CTGCAG 2 cut(s) 1003, 1360
BspMI ACCTGC 1 cut(s) 1759
BspPI GGATC 2 cut(s) 186, 1652
BspQI GCTCTTC 1 cut(s) 1856
BspT107I GGYRCC 1 cut(s) 1178
BsrFI RCCGGY 1 cut(s) 401
BsrI ACTGG 4 cut(s) 509, 832, 1300, 1743
BssAI RCCGGY 1 cut(s) 401
BssECI CCNNGG 4 cut(s) 199, 1749, 1830, 1867
BssMI GATC 7 cut(s) 118, 191, 340, 1063, 1067, 1424, 1657
BssNI GRCGYC 2 cut(s) 1836, 1942
BssT1I CCWWGG 2 cut(s) 199, 1830
Bst2UI CCWGG 6 cut(s) 407, 1134, 1497, 1552, 1751, 1868
Bst4CI ACNGT 2 cut(s) 1306, 1540
Bst6I CTCTTC 1 cut(s) 1856
BstACI GRCGYC 2 cut(s) 1836, 1942
BstAPI GCANNNNNTGC 1 cut(s) 973
BstC8I GCNNGC 4 cut(s) 132, 677, 765, 1766
BstENI CCTNNNNNAGG 1 cut(s) 1131
BstF5I GGATG 8 cut(s) 802, 823, 1100, 1178, 1216, 1470, 1651, 1912
BstHHI GCGC 1 cut(s) 660
BstKTI GATC 7 cut(s) 121, 194, 343, 1066, 1070, 1427, 1660
BstMAI GTCTC 4 cut(s) 1218, 1671, 1795, 1930
BstMBI GATC 7 cut(s) 118, 191, 340, 1063, 1067, 1424, 1657
BstMWI GCNNNNNNNGC 6 cut(s) 973, 1321, 1340, 1835, 1863, 1955
BstNI CCWGG 6 cut(s) 407, 1134, 1497, 1552, 1751, 1868
BstNSI RCATGY 2 cut(s) 679, 1598
BstSCI CCNGG 6 cut(s) 405, 1132, 1495, 1550, 1749, 1866
BstSFI CTRYAG 2 cut(s) 999, 1356
BstSLI GKGCMC 1 cut(s) 1345
BstV1I GCAGC 6 cut(s) 146, 772, 946, 970, 985, 1013
BstX2I RGATCY 2 cut(s) 118, 1424
BstXI CCANNNNNNTGG 4 cut(s) 532, 728, 1738, 1757
BstYI RGATCY 2 cut(s) 118, 1424
Bsu15I ATCGAT 2 cut(s) 190, 1066
BsuRI GGCC 2 cut(s) 405, 410
BsuTUI ATCGAT 2 cut(s) 190, 1066
BtrI CACGTC 1 cut(s) 1025
BtsCI GGATG 8 cut(s) 802, 823, 1100, 1178, 1216, 1470, 1651, 1912
BtsIMutI CAGTG 3 cut(s) 702, 1066, 1345
BveI ACCTGC 1 cut(s) 1759
Cac8I GCNNGC 4 cut(s) 132, 677, 765, 1766
CfoI GCGC 1 cut(s) 660
Cfr10I RCCGGY 1 cut(s) 401
Cfr13I GGNCC 2 cut(s) 281, 307
ClaI ATCGAT 2 cut(s) 190, 1066
CseI GACGC 2 cut(s) 946, 1844
CsiI ACCWGGT 1 cut(s) 1132
Csp6I GTAC 3 cut(s) 810, 825, 1598
CviAII CATG 7 cut(s) 332, 607, 676, 1169, 1595, 1642, 1858
CviQI GTAC 3 cut(s) 810, 825, 1598
DpnI GATC 7 cut(s) 120, 193, 342, 1065, 1069, 1426, 1659
DpnII GATC 7 cut(s) 118, 191, 340, 1063, 1067, 1424, 1657
DraIII CACNNNGTG 1 cut(s) 1136
EaeI YGGCCR 1 cut(s) 403
Eam1104I CTCTTC 1 cut(s) 1856
EarI CTCTTC 1 cut(s) 1856
EciI GGCGGA 4 cut(s) 503, 1131, 1570, 1695
Eco130I CCWWGG 2 cut(s) 199, 1830
Eco147I AGGCCT 1 cut(s) 410
Eco47I GGWCC 2 cut(s) 281, 307
Eco57I CTGAAG 4 cut(s) 258, 1034, 1062, 1413
EcoNI CCTNNNNNAGG 1 cut(s) 1131
EcoO109I RGGNCCY 1 cut(s) 307
EcoRI GAATTC 2 cut(s) 270, 709
EcoRII CCWGG 6 cut(s) 405, 1132, 1495, 1550, 1749, 1866
EcoT14I CCWWGG 2 cut(s) 199, 1830
EcoT22I ATGCAT 3 cut(s) 333, 677, 681
ErhI CCWWGG 2 cut(s) 199, 1830
Esp3I CGTCTC 1 cut(s) 1930
FaeI CATG 7 cut(s) 335, 610, 679, 1172, 1598, 1645, 1861
FalI AAGNNNNNCTT 3 cut(s) 1685, 1717, 1963
FaqI GGGAC 2 cut(s) 1035, 1366
FatI CATG 7 cut(s) 331, 606, 675, 1168, 1594, 1641, 1857
FauI CCCGC 2 cut(s) 44, 786
Fnu4HI GCNGC 8 cut(s) 135, 761, 935, 984, 999, 1002, 1709, 1794
FokI GGATG 8 cut(s) 809, 830, 1107, 1185, 1203, 1477, 1658, 1919
Fsp4HI GCNGC 8 cut(s) 135, 761, 935, 984, 999, 1002, 1709, 1794
FspBI CTAG 3 cut(s) 1221, 1326, 1895
GlaI GCGC 1 cut(s) 659
GluI GCNGC 8 cut(s) 135, 761, 935, 984, 999, 1002, 1709, 1794
GsaI CCCAGC 1 cut(s) 1848
GsuI CTGGAG 3 cut(s) 526, 1317, 1760
HaeIII GGCC 2 cut(s) 405, 410
HapII CCGG 2 cut(s) 402, 777
HgaI GACGC 2 cut(s) 946, 1844
HhaI GCGC 1 cut(s) 660
Hin1I GRCGYC 2 cut(s) 1836, 1942
Hin1II CATG 7 cut(s) 335, 610, 679, 1172, 1598, 1645, 1861
Hin6I GCGC 1 cut(s) 658
HinP1I GCGC 1 cut(s) 658
HindIII AAGCTT 4 cut(s) 98, 263, 1687, 1947
HinfI GANTC 6 cut(s) 510, 617, 1088, 1280, 1589, 1754
HpaII CCGG 2 cut(s) 402, 777
HphI GGTGA 6 cut(s) 337, 919, 1122, 1124, 1536, 1783
Hpy166II GTNNAC 2 cut(s) 652, 1343
Hpy188I TCNGA 9 cut(s) 539, 622, 631, 1014, 1042, 1072, 1510, 1525, 1675
Hpy188III TCNNGA 4 cut(s) 26, 344, 1092, 1693
Hpy8I GTNNAC 2 cut(s) 652, 1343
Hpy99I CGWCG 1 cut(s) 1944
HpyAV CCTTC 7 cut(s) 205, 321, 685, 1009, 1137, 1187, 1847
HpyCH4III ACNGT 2 cut(s) 1306, 1540
HpyCH4IV ACGT 3 cut(s) 364, 1024, 1942
HpyF10VI GCNNNNNNNGC 6 cut(s) 973, 1321, 1340, 1835, 1863, 1955
HpySE526I ACGT 3 cut(s) 364, 1024, 1942
Hsp92I GRCGYC 2 cut(s) 1836, 1942
Hsp92II CATG 7 cut(s) 335, 610, 679, 1172, 1598, 1645, 1861
HspAI GCGC 1 cut(s) 658
Kzo9I GATC 7 cut(s) 118, 191, 340, 1063, 1067, 1424, 1657
LguI GCTCTTC 1 cut(s) 1856
Lsp1109I GCAGC 6 cut(s) 146, 772, 946, 970, 985, 1013
MabI ACCWGGT 1 cut(s) 1132
MaeI CTAG 3 cut(s) 1221, 1326, 1895
MaeII ACGT 3 cut(s) 364, 1024, 1942
MaeIII GTNAC 4 cut(s) 567, 1234, 1291, 1534
MalI GATC 7 cut(s) 120, 193, 342, 1065, 1069, 1426, 1659
MboI GATC 7 cut(s) 118, 191, 340, 1063, 1067, 1424, 1657
MflI RGATCY 2 cut(s) 118, 1424
MhlI GDGCHC 4 cut(s) 180, 1141, 1345, 1608
MmeI TCCRAC 3 cut(s) 385, 1183, 1392
Mph1103I ATGCAT 3 cut(s) 333, 677, 681
MroXI GAANNNNTTC 1 cut(s) 1504
MseI TTAA 6 cut(s) 153, 584, 750, 896, 1107, 1987
MslI CAYNNNNRTG 5 cut(s) 465, 576, 684, 726, 1173
MspI CCGG 2 cut(s) 402, 777
MspR9I CCNGG 6 cut(s) 407, 1134, 1497, 1552, 1751, 1868
Mva1269I GAATGC 3 cut(s) 502, 919, 985
MvaI CCWGG 6 cut(s) 407, 1134, 1497, 1552, 1751, 1868
MwoI GCNNNNNNNGC 6 cut(s) 973, 1321, 1340, 1835, 1863, 1955
NdeII GATC 7 cut(s) 118, 191, 340, 1063, 1067, 1424, 1657
NlaIII CATG 7 cut(s) 335, 610, 679, 1172, 1598, 1645, 1861
NlaIV GGNNCC 3 cut(s) 309, 359, 1180
NsiI ATGCAT 3 cut(s) 333, 677, 681
NspI RCATGY 2 cut(s) 679, 1598
OliI CACNNNNGTG 1 cut(s) 465
PaeI GCATGC 1 cut(s) 679
PaqCI CACCTGC 1 cut(s) 1759
PceI AGGCCT 1 cut(s) 410
PciI ACATGT 1 cut(s) 1594
PciSI GCTCTTC 1 cut(s) 1856
PctI GAATGC 3 cut(s) 502, 919, 985
PdmI GAANNNNTTC 1 cut(s) 1504
PfeI GAWTC 6 cut(s) 510, 617, 1088, 1280, 1589, 1754
PflFI GACNNNGTC 1 cut(s) 1941
PkrI GCNGC 8 cut(s) 136, 762, 936, 985, 1000, 1003, 1710, 1795
PpuMI RGGWCCY 1 cut(s) 307
PscI ACATGT 1 cut(s) 1594
PshBI ATTAAT 1 cut(s) 1107
PsiI TTATAA 1 cut(s) 1574
Psp5II RGGWCCY 1 cut(s) 307
Psp6I CCWGG 6 cut(s) 405, 1132, 1495, 1550, 1749, 1866
PspFI CCCAGC 1 cut(s) 1844
PspGI CCWGG 6 cut(s) 405, 1132, 1495, 1550, 1749, 1866
PspN4I GGNNCC 3 cut(s) 309, 359, 1180
PspPI GGNCC 2 cut(s) 281, 307
PspPPI RGGWCCY 1 cut(s) 307
PstI CTGCAG 2 cut(s) 1003, 1360
PsuI RGATCY 2 cut(s) 118, 1424
PsyI GACNNNGTC 1 cut(s) 1941
RsaI GTAC 3 cut(s) 811, 826, 1599
RsaNI GTAC 3 cut(s) 810, 825, 1598
RseI CAYNNNNRTG 5 cut(s) 465, 576, 684, 726, 1173
SapI GCTCTTC 1 cut(s) 1856
SaqAI TTAA 6 cut(s) 153, 584, 750, 896, 1107, 1987
SatI GCNGC 8 cut(s) 135, 761, 935, 984, 999, 1002, 1709, 1794
Sau3AI GATC 7 cut(s) 118, 191, 340, 1063, 1067, 1424, 1657
Sau96I GGNCC 2 cut(s) 281, 307
ScaI AGTACT 1 cut(s) 826
ScrFI CCNGG 6 cut(s) 407, 1134, 1497, 1552, 1751, 1868
SduI GDGCHC 4 cut(s) 180, 1141, 1345, 1608
SexAI ACCWGGT 1 cut(s) 1132
SfcI CTRYAG 2 cut(s) 999, 1356
SinI GGWCC 2 cut(s) 281, 307
SmiMI CAYNNNNRTG 5 cut(s) 465, 576, 684, 726, 1173
SmlI CTYRAG 3 cut(s) 122, 412, 1684
SmoI CTYRAG 3 cut(s) 122, 412, 1684
SphI GCATGC 1 cut(s) 679
SseBI AGGCCT 1 cut(s) 410
SspMI CTAG 3 cut(s) 1221, 1326, 1895
StuI AGGCCT 1 cut(s) 410
StyD4I CCNGG 6 cut(s) 405, 1132, 1495, 1550, 1749, 1866
StyI CCWWGG 2 cut(s) 199, 1830
TaaI ACNGT 2 cut(s) 1306, 1540
TaiI ACGT 3 cut(s) 367, 1027, 1945
TaqI TCGA 4 cut(s) 190, 343, 858, 1066
TaqII GACCGA 1 cut(s) 269
TatI WGTACW 1 cut(s) 824
TauI GCSGC 2 cut(s) 1711, 1796
TfiI GAWTC 6 cut(s) 510, 617, 1088, 1280, 1589, 1754
Tru1I TTAA 6 cut(s) 153, 584, 750, 896, 1107, 1987
Tru9I TTAA 6 cut(s) 153, 584, 750, 896, 1107, 1987
TscAI CASTG 3 cut(s) 709, 1066, 1345
TseI GCWGC 6 cut(s) 134, 760, 934, 983, 998, 1001
TspDTI ATGAA 8 cut(s) 171, 263, 834, 912, 1101, 1205, 1803, 1874
TspGWI ACGGA 1 cut(s) 1973
TspRI CASTG 3 cut(s) 709, 1066, 1345
Tth111I GACNNNGTC 1 cut(s) 1941
VneI GTGCAC 1 cut(s) 1341
VpaK11BI GGWCC 2 cut(s) 281, 307
VspI ATTAAT 1 cut(s) 1107
XagI CCTNNNNNAGG 1 cut(s) 1131
XapI RAATTY 5 cut(s) 158, 222, 270, 709, 1373
XceI RCATGY 2 cut(s) 679, 1598
XcmI CCANNNNNNNNNTGG 2 cut(s) 368, 1757
XmnI GAANNNNTTC 1 cut(s) 1504
XspI CTAG 3 cut(s) 1221, 1326, 1895
ZraI GACGTC 1 cut(s) 1943
ZrmI AGTACT 1 cut(s) 826
Zsp2I ATGCAT 3 cut(s) 333, 677, 681
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.