Rroxscaffold_6G00389270

Exosome component 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0004155
Physical Location & Seq
Forward (+)
2679790 .. 2688518
8729 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00389270.1

Sequence Viewer

Length: 1773 bp
ATGCAAATTTCTACAAGAACTGAAGATTTTATAGTCGATACTTTGAAGCTTAGAATTCATATCGGTCCATATCTTAGGGAAGTTTTCAAGGACCCTTCTAAGAGAAAGGTGATGCATGGAGCAGATCGAGATATTGTGTGGCTCCAACGTGATTTTGGCATTTATATCTGCAATTTGTTTGACACCGGCCAGGCCTCAAGGGTATTGAAATTGGAGAGAAATAGTTTGGAATATCTTTTGCATCACTTTTGTGATGTTTCTGCCAACAAAGAATACCAGAATGCAGACTGGAGATTCCGCCCTCTTACCAAAGAGATGGTCAGATATGCCAGAGAAGATACACACTACCTGTTATACATATATGATTTAATGAGAGCGAAGTTATCTTCCATGCCAAAGGAATCTGAAAACTCTGATGCTCCCTTAGTAGAGGTTTACAGGCGCAGTTATGATATATGCATGCATCTCTATGAGAAGGAAGTTTTCACTGAGAATTCCTATCTCCACGTATATGGGTTGCAGGGTGCTTGTTTTAATTCTCAGCAGCTTGCCGTTGTTTCCGGTTTATATGAGTGGCGGGATGTTGTTGCTCGTGCAGAGGATGAAAGTACTGGCTATATATTACCAAACAAAACTCTACTCGAACTTGCTAAACAGATGCCTGACACAACTAACAAGTTAAGACGATTGGTGAAATCAAAGCATTCATACATTGAGCAACATCTTTCTTCTGTTGTTAGCGTCATTAGGCACTCTATGCAGAATGCTGCCTTTTTTGAGGCTGCAGCCGAACATCTGAAGGTGGTACGTGTGGAAATGGCATCTGAAGAAAATGTGTTGGTCAGTGATCGATCTGAACCCTTACCAGATGAATCTGAATGCAATTCAATTAATGGTGATGTATCTGCACCTTCACCAGCTGCTCCGCCTCATAAAGAGGAGTTTACAGAGCATGGATGTGGTGCCTCCAATGGAGAAGGAAAGGTTGGATTTGAAGTTCATCCTAGAGACAACATTGTAACAGGGAAAAGCAGGGAAGGAAGTAGCATTGGCTGTTCCTTAGAATCTGCAAAGGTTACTGGAGCAACTGTTCAGGTGCAAAAGAAGCCTAGTCGTGCTTTCAGTGCACTCTTGGGGACTGCAGTTCCAAAAAGAAAATTTGATGCTGGTGTAAAGGACAAGGAAGATAATAAGTTGGAGCAGATTAGATCTTCAGTCAATTTCCCATTCCACTCATTCTCAGGTGGGATGGAGCAATCAAATCCCAAGATTGAAGAACCAGGAAAAGGTTCTGAAAATCCCTATTCTGAAATGCCCATTACTGTATCACCTACCAGGCGGAGTTTAGGAGATATTATAACATTGGAAAATGATTCACATGTACCTGAGCACAAGGAGGATAACTCGCTGGCTTCTGCTTTAGGCATGGATGGAGAAGATGATCCTATGTCTCTCTCAGAGTTGTCCTCAAGCTTCAAGAAATGCTTTCCGCCACCTAATCAAAATAGGAAAGCCAGAGAACTGGAGAAATCCCAGGAATCTGGTGGCATGCAGGTGAAACCTTTTGACTATGAAGCGGCAAGGAGACAGGTCATATTTGGAGAAAAGACAGCCAAGGACGCCAGAGCTGGGGGAGAAGGCATGAAGGGCCTGGGTTCAAGGGCTAAGAAAAAAACTCTAGTTGATGGGGATGATGGGTCAAAAGAGCTACCACAAGGGAGACGACGTCAAGCTTTTCCAGCAACAGGAAATAGAAGTGCAACTTTCCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000175 GO:0000178 GO:0000460 GO:0000785 GO:0000956 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006364 GO:0006396 GO:0006401 GO:0006402 GO:0006403 GO:0006725 GO:0006807 GO:0007549 GO:0008150 GO:0008152 GO:0008298 GO:0008334 GO:0008408 GO:0009048 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0010639 GO:0016070 GO:0016071 GO:0016072 GO:0016075 GO:0016458 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019219 GO:0019222 GO:0019439 GO:0022613 GO:0031047 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032204 GO:0032205 GO:0032210 GO:0032211 GO:0032259 GO:0032268 GO:0032270 GO:0032879 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0035327 GO:0040029 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043632 GO:0043633 GO:0043634 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044728 GO:0045934 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051246 GO:0051247 GO:0051641 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0071025 GO:0071027 GO:0071028 GO:0071029 GO:0071030 GO:0071033 GO:0071034 GO:0071035 GO:0071043 GO:0071044 GO:0071046 GO:0071048 GO:0071704 GO:0071840 GO:0080090 GO:0080188 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1902275 GO:1902464 GO:1902466 GO:1902494 GO:1904356 GO:1904357 GO:1904872 GO:1905269 GO:1905354 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
DNA_pol_A_exo1 HRDC PMC2NT

Protein Analysis

590

Amino Acids

66.19

Weight (kDa)

6.53

Isoelectric Point (pI)

52.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_pol_A_exo1 PF01612 1 - 128 2.2e-36 3'-5' exonuclease
HRDC PF00570 182 - 249 4e-14 HRDC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1358
AarI CACCTGC 1 cut(s) 1543
AatII GACGTC 1 cut(s) 1729
Acc36I ACCTGC 1 cut(s) 1543
AccB1I GGYRCC 1 cut(s) 962
AciI CCGC 6 cut(s) 298, 577, 926, 1339, 1490, 1577
AclWI GGATC 1 cut(s) 1436
AcoI YGGCCR 1 cut(s) 187
AcsI RAATTY 4 cut(s) 6, 54, 493, 1157
AcuI CTGAAG 4 cut(s) 42, 818, 846, 1197
AcyI GRCGYC 2 cut(s) 1620, 1726
AfaI GTAC 3 cut(s) 610, 807, 1383
AfiI CCNNNNNNNGG 3 cut(s) 1286, 1629, 1745
AflIII ACRYGT 2 cut(s) 808, 1378
AgsI TTSAA 8 cut(s) 46, 88, 208, 888, 995, 1274, 1477, 1659
AjnI CCWGG 5 cut(s) 189, 1279, 1334, 1533, 1650
AjuI GAANNNNNNNTTGG 2 cut(s) 969, 1001
AleI CACNNNNGTG 1 cut(s) 249
AloI GAACNNNNNNTCC 4 cut(s) 981, 1013, 1074, 1106
AluBI AGCT 7 cut(s) 49, 547, 920, 1473, 1628, 1708, 1733
AluI AGCT 7 cut(s) 49, 547, 920, 1473, 1628, 1708, 1733
Alw21I GWGCWC 2 cut(s) 1129, 1392
Alw26I GTCTC 4 cut(s) 1002, 1455, 1579, 1714
Alw44I GTGCAC 1 cut(s) 1125
AlwI GGATC 1 cut(s) 1436
AoxI GGCC 3 cut(s) 187, 192, 1648
ApaLI GTGCAC 1 cut(s) 1125
ApeKI GCWGC 5 cut(s) 544, 767, 782, 785, 920
ApoI RAATTY 4 cut(s) 6, 54, 493, 1157
ArsI GACNNNNNNTTYG 2 cut(s) 303, 335
AseI ATTAAT 1 cut(s) 891
Asp700I GAANNNNTTC 1 cut(s) 1288
AspLEI GCGC 1 cut(s) 444
AspS9I GGNCC 3 cut(s) 65, 91, 1648
AsuHPI GGTGA 6 cut(s) 121, 703, 906, 908, 1320, 1567
AvaII GGWCC 2 cut(s) 65, 91
BaeGI GKGCMC 1 cut(s) 1129
BanI GGYRCC 1 cut(s) 962
BauI CACGAG 1 cut(s) 591
Bbv12I GWGCWC 2 cut(s) 1129, 1392
BbvI GCAGC 5 cut(s) 556, 754, 769, 797, 907
BccI CCATC 5 cut(s) 310, 1243, 1424, 1679, 1688
BceAI ACGGC 1 cut(s) 536
BciT130I CCWGG 5 cut(s) 191, 1281, 1336, 1535, 1652
BcoDI GTCTC 4 cut(s) 1002, 1455, 1579, 1714
BfaI CTAG 3 cut(s) 1005, 1110, 1679
BfmI CTRYAG 2 cut(s) 783, 1140
BfuAI ACCTGC 1 cut(s) 1543
BglII AGATCT 1 cut(s) 1208
BisI GCNGC 6 cut(s) 545, 768, 783, 786, 921, 1578
BlsI GCNGC 6 cut(s) 546, 769, 784, 787, 922, 1579
BmcAI AGTACT 1 cut(s) 610
Bme1390I CCNGG 5 cut(s) 191, 1281, 1336, 1535, 1652
Bme18I GGWCC 2 cut(s) 65, 91
BmgT120I GGNCC 3 cut(s) 65, 91, 1648
BmiI GGNNCC 3 cut(s) 93, 143, 964
BmrFI CCNGG 5 cut(s) 191, 1281, 1336, 1535, 1652
BmsI GCATC 7 cut(s) 102, 250, 406, 472, 648, 830, 1153
BplI GAGNNNNNCTC 4 cut(s) 1388, 1420, 1451, 1483
BpmI CTGGAG 3 cut(s) 310, 1101, 1544
Bpu10I CCTNAGC 1 cut(s) 1386
BpuEI CTTGAG 2 cut(s) 181, 1453
Bsa29I ATCGAT 1 cut(s) 850
BsaAI YACGTR 2 cut(s) 508, 809
BsaHI GRCGYC 2 cut(s) 1620, 1726
BsaJI CCNNGG 3 cut(s) 1533, 1614, 1651
BsaWI WCCGGW 1 cut(s) 560
BsaXI ACNNNNNCTCC 4 cut(s) 1074, 1104, 1711, 1741
Bsc4I CCNNNNNNNGG 3 cut(s) 1286, 1629, 1745
Bse118I RCCGGY 1 cut(s) 185
Bse1I ACTGG 4 cut(s) 293, 616, 1084, 1527
BseBI CCWGG 5 cut(s) 191, 1281, 1336, 1535, 1652
BseCI ATCGAT 1 cut(s) 850
BseDI CCNNGG 3 cut(s) 1533, 1614, 1651
BseGI GGATG 7 cut(s) 586, 607, 962, 1000, 1254, 1435, 1696
BseLI CCNNNNNNNGG 3 cut(s) 1286, 1629, 1745
BseMII CTCAG 5 cut(s) 480, 554, 1254, 1377, 1470
BseNI ACTGG 4 cut(s) 293, 616, 1084, 1527
BseRI GAGGAG 1 cut(s) 953
BseSI GKGCMC 1 cut(s) 1129
BseXI GCAGC 5 cut(s) 556, 754, 769, 797, 907
BseYI CCCAGC 1 cut(s) 1628
BsgI GTGCAG 2 cut(s) 615, 891
BshFI GGCC 3 cut(s) 189, 194, 1650
BshNI GGYRCC 1 cut(s) 962
BshVI ATCGAT 1 cut(s) 850
BsiHKAI GWGCWC 2 cut(s) 1129, 1392
BsiSI CCGG 2 cut(s) 186, 561
BslFI GGGAC 1 cut(s) 1150
BslI CCNNNNNNNGG 3 cut(s) 1286, 1629, 1745
BsmAI GTCTC 4 cut(s) 1002, 1455, 1579, 1714
BsmBI CGTCTC 1 cut(s) 1714
BsmFI GGGAC 1 cut(s) 1150
BsmI GAATGC 4 cut(s) 286, 703, 769, 884
BsnI GGCC 3 cut(s) 189, 194, 1650
Bsp1286I GDGCHC 2 cut(s) 1129, 1392
Bsp143I GATC 5 cut(s) 124, 847, 851, 1208, 1441
BspACI CCGC 6 cut(s) 298, 577, 926, 1339, 1490, 1577
BspANI GGCC 3 cut(s) 189, 194, 1650
BspCNI CTCAG 5 cut(s) 481, 553, 1253, 1378, 1469
BspDI ATCGAT 1 cut(s) 850
BspLI GGNNCC 3 cut(s) 93, 143, 964
BspMAI CTGCAG 2 cut(s) 787, 1144
BspMI ACCTGC 1 cut(s) 1543
BspPI GGATC 1 cut(s) 1436
BspT107I GGYRCC 1 cut(s) 962
BsrFI RCCGGY 1 cut(s) 185
BsrI ACTGG 4 cut(s) 293, 616, 1084, 1527
BssAI RCCGGY 1 cut(s) 185
BssECI CCNNGG 3 cut(s) 1533, 1614, 1651
BssMI GATC 5 cut(s) 124, 847, 851, 1208, 1441
BssNI GRCGYC 2 cut(s) 1620, 1726
BssSI CACGAG 1 cut(s) 591
BssT1I CCWWGG 1 cut(s) 1614
Bst2BI CACGAG 1 cut(s) 591
Bst2UI CCWGG 5 cut(s) 191, 1281, 1336, 1535, 1652
Bst4CI ACNGT 2 cut(s) 1090, 1324
BstACI GRCGYC 2 cut(s) 1620, 1726
BstAPI GCANNNNNTGC 1 cut(s) 757
BstBAI YACGTR 2 cut(s) 508, 809
BstC8I GCNNGC 4 cut(s) 461, 549, 1410, 1550
BstF5I GGATG 7 cut(s) 586, 607, 962, 1000, 1254, 1435, 1696
BstHHI GCGC 1 cut(s) 444
BstKTI GATC 5 cut(s) 127, 850, 854, 1211, 1444
BstMAI GTCTC 4 cut(s) 1002, 1455, 1579, 1714
BstMBI GATC 5 cut(s) 124, 847, 851, 1208, 1441
BstMWI GCNNNNNNNGC 6 cut(s) 757, 1105, 1124, 1619, 1647, 1739
BstNI CCWGG 5 cut(s) 191, 1281, 1336, 1535, 1652
BstNSI RCATGY 3 cut(s) 463, 1382, 1552
BstSCI CCNGG 5 cut(s) 189, 1279, 1334, 1533, 1650
BstSFI CTRYAG 2 cut(s) 783, 1140
BstSLI GKGCMC 1 cut(s) 1129
BstV1I GCAGC 5 cut(s) 556, 754, 769, 797, 907
BstX2I RGATCY 1 cut(s) 1208
BstXI CCANNNNNNTGG 4 cut(s) 316, 512, 1522, 1541
BstYI RGATCY 1 cut(s) 1208
Bsu15I ATCGAT 1 cut(s) 850
BsuRI GGCC 3 cut(s) 189, 194, 1650
BsuTUI ATCGAT 1 cut(s) 850
BtsCI GGATG 7 cut(s) 586, 607, 962, 1000, 1254, 1435, 1696
BtsIMutI CAGTG 3 cut(s) 486, 850, 1129
BveI ACCTGC 1 cut(s) 1543
Cac8I GCNNGC 4 cut(s) 461, 549, 1410, 1550
CfoI GCGC 1 cut(s) 444
Cfr10I RCCGGY 1 cut(s) 185
Cfr13I GGNCC 3 cut(s) 65, 91, 1648
ClaI ATCGAT 1 cut(s) 850
CseI GACGC 2 cut(s) 730, 1628
Csp6I GTAC 3 cut(s) 609, 806, 1382
CviAII CATG 8 cut(s) 116, 391, 460, 953, 1379, 1426, 1549, 1642
CviQI GTAC 3 cut(s) 609, 806, 1382
DpnI GATC 5 cut(s) 126, 849, 853, 1210, 1443
DpnII GATC 5 cut(s) 124, 847, 851, 1208, 1441
EaeI YGGCCR 1 cut(s) 187
EciI GGCGGA 4 cut(s) 287, 915, 1354, 1479
Eco130I CCWWGG 1 cut(s) 1614
Eco147I AGGCCT 1 cut(s) 194
Eco47I GGWCC 2 cut(s) 65, 91
Eco57I CTGAAG 4 cut(s) 42, 818, 846, 1197
EcoO109I RGGNCCY 2 cut(s) 91, 1648
EcoRI GAATTC 2 cut(s) 54, 493
EcoRII CCWGG 5 cut(s) 189, 1279, 1334, 1533, 1650
EcoT14I CCWWGG 1 cut(s) 1614
EcoT22I ATGCAT 3 cut(s) 117, 461, 465
ErhI CCWWGG 1 cut(s) 1614
Esp3I CGTCTC 1 cut(s) 1714
FaeI CATG 8 cut(s) 119, 394, 463, 956, 1382, 1429, 1552, 1645
FalI AAGNNNNNCTT 3 cut(s) 1469, 1501, 1747
FaqI GGGAC 1 cut(s) 1150
FatI CATG 8 cut(s) 115, 390, 459, 952, 1378, 1425, 1548, 1641
FauI CCCGC 1 cut(s) 570
Fnu4HI GCNGC 6 cut(s) 545, 768, 783, 786, 921, 1578
FokI GGATG 7 cut(s) 593, 614, 969, 987, 1261, 1442, 1703
Fsp4HI GCNGC 6 cut(s) 545, 768, 783, 786, 921, 1578
FspBI CTAG 3 cut(s) 1005, 1110, 1679
GlaI GCGC 1 cut(s) 443
GluI GCNGC 6 cut(s) 545, 768, 783, 786, 921, 1578
GsaI CCCAGC 1 cut(s) 1632
GsuI CTGGAG 3 cut(s) 310, 1101, 1544
HaeIII GGCC 3 cut(s) 189, 194, 1650
HapII CCGG 2 cut(s) 186, 561
HgaI GACGC 2 cut(s) 730, 1628
HhaI GCGC 1 cut(s) 444
Hin1I GRCGYC 2 cut(s) 1620, 1726
Hin1II CATG 8 cut(s) 119, 394, 463, 956, 1382, 1429, 1552, 1645
Hin6I GCGC 1 cut(s) 442
HinP1I GCGC 1 cut(s) 442
HindIII AAGCTT 3 cut(s) 47, 1471, 1731
HinfI GANTC 6 cut(s) 294, 401, 872, 1064, 1373, 1538
HpaII CCGG 2 cut(s) 186, 561
HphI GGTGA 6 cut(s) 121, 703, 906, 908, 1320, 1567
Hpy166II GTNNAC 3 cut(s) 436, 945, 1127
Hpy188III TCNNGA 2 cut(s) 128, 1477
Hpy8I GTNNAC 3 cut(s) 436, 945, 1127
Hpy99I CGWCG 1 cut(s) 1728
HpyAV CCTTC 8 cut(s) 105, 469, 793, 921, 971, 1031, 1631, 1639
HpyCH4III ACNGT 2 cut(s) 1090, 1324
HpyCH4IV ACGT 4 cut(s) 148, 507, 808, 1726
HpyF10VI GCNNNNNNNGC 6 cut(s) 757, 1105, 1124, 1619, 1647, 1739
HpySE526I ACGT 4 cut(s) 148, 507, 808, 1726
Hsp92I GRCGYC 2 cut(s) 1620, 1726
Hsp92II CATG 8 cut(s) 119, 394, 463, 956, 1382, 1429, 1552, 1645
HspAI GCGC 1 cut(s) 442
Kzo9I GATC 5 cut(s) 124, 847, 851, 1208, 1441
LmnI GCTCC 7 cut(s) 119, 147, 424, 928, 1082, 1198, 1252
Lsp1109I GCAGC 5 cut(s) 556, 754, 769, 797, 907
LweI GCATC 7 cut(s) 102, 250, 406, 472, 648, 830, 1153
MaeI CTAG 3 cut(s) 1005, 1110, 1679
MaeII ACGT 4 cut(s) 148, 507, 808, 1726
MaeIII GTNAC 2 cut(s) 1018, 1075
MalI GATC 5 cut(s) 126, 849, 853, 1210, 1443
MboI GATC 5 cut(s) 124, 847, 851, 1208, 1441
MboII GAAGA 9 cut(s) 35, 347, 378, 720, 839, 1196, 1203, 1286, 1448
MflI RGATCY 1 cut(s) 1208
MhlI GDGCHC 2 cut(s) 1129, 1392
MmeI TCCRAC 3 cut(s) 169, 967, 1176
Mph1103I ATGCAT 3 cut(s) 117, 461, 465
MroXI GAANNNNTTC 1 cut(s) 1288
MseI TTAA 5 cut(s) 368, 534, 680, 891, 1771
MslI CAYNNNNRTG 5 cut(s) 249, 468, 510, 957, 1553
MspA1I CMGCKG 1 cut(s) 920
MspI CCGG 2 cut(s) 186, 561
MspR9I CCNGG 5 cut(s) 191, 1281, 1336, 1535, 1652
Mva1269I GAATGC 4 cut(s) 286, 703, 769, 884
MvaI CCWGG 5 cut(s) 191, 1281, 1336, 1535, 1652
MwoI GCNNNNNNNGC 6 cut(s) 757, 1105, 1124, 1619, 1647, 1739
NdeII GATC 5 cut(s) 124, 847, 851, 1208, 1441
NlaIII CATG 8 cut(s) 119, 394, 463, 956, 1382, 1429, 1552, 1645
NlaIV GGNNCC 3 cut(s) 93, 143, 964
NsiI ATGCAT 3 cut(s) 117, 461, 465
NspI RCATGY 3 cut(s) 463, 1382, 1552
OliI CACNNNNGTG 1 cut(s) 249
PaeI GCATGC 2 cut(s) 463, 1552
PaqCI CACCTGC 1 cut(s) 1543
PceI AGGCCT 1 cut(s) 194
PciI ACATGT 1 cut(s) 1378
PctI GAATGC 4 cut(s) 286, 703, 769, 884
PdmI GAANNNNTTC 1 cut(s) 1288
PfeI GAWTC 6 cut(s) 294, 401, 872, 1064, 1373, 1538
PflFI GACNNNGTC 1 cut(s) 1725
PkrI GCNGC 6 cut(s) 546, 769, 784, 787, 922, 1579
Ppu21I YACGTR 2 cut(s) 508, 809
PpuMI RGGWCCY 1 cut(s) 91
PscI ACATGT 1 cut(s) 1378
PshBI ATTAAT 1 cut(s) 891
PsiI TTATAA 1 cut(s) 1358
Psp5II RGGWCCY 1 cut(s) 91
Psp6I CCWGG 5 cut(s) 189, 1279, 1334, 1533, 1650
PspFI CCCAGC 1 cut(s) 1628
PspGI CCWGG 5 cut(s) 189, 1279, 1334, 1533, 1650
PspN4I GGNNCC 3 cut(s) 93, 143, 964
PspPI GGNCC 3 cut(s) 65, 91, 1648
PspPPI RGGWCCY 1 cut(s) 91
PstI CTGCAG 2 cut(s) 787, 1144
PsuI RGATCY 1 cut(s) 1208
PsyI GACNNNGTC 1 cut(s) 1725
PvuII CAGCTG 1 cut(s) 920
RsaI GTAC 3 cut(s) 610, 807, 1383
RsaNI GTAC 3 cut(s) 609, 806, 1382
RseI CAYNNNNRTG 5 cut(s) 249, 468, 510, 957, 1553
SaqAI TTAA 5 cut(s) 368, 534, 680, 891, 1771
SatI GCNGC 6 cut(s) 545, 768, 783, 786, 921, 1578
Sau3AI GATC 5 cut(s) 124, 847, 851, 1208, 1441
Sau96I GGNCC 3 cut(s) 65, 91, 1648
ScaI AGTACT 1 cut(s) 610
ScrFI CCNGG 5 cut(s) 191, 1281, 1336, 1535, 1652
SduI GDGCHC 2 cut(s) 1129, 1392
SfaNI GCATC 7 cut(s) 102, 250, 406, 472, 648, 830, 1153
SfcI CTRYAG 2 cut(s) 783, 1140
SinI GGWCC 2 cut(s) 65, 91
SmiMI CAYNNNNRTG 5 cut(s) 249, 468, 510, 957, 1553
SmlI CTYRAG 2 cut(s) 196, 1468
SmoI CTYRAG 2 cut(s) 196, 1468
SphI GCATGC 2 cut(s) 463, 1552
SseBI AGGCCT 1 cut(s) 194
SsiI CCGC 6 cut(s) 298, 577, 926, 1339, 1490, 1577
SspMI CTAG 3 cut(s) 1005, 1110, 1679
StuI AGGCCT 1 cut(s) 194
StyD4I CCNGG 5 cut(s) 189, 1279, 1334, 1533, 1650
StyI CCWWGG 1 cut(s) 1614
TaaI ACNGT 2 cut(s) 1090, 1324
TaiI ACGT 4 cut(s) 151, 510, 811, 1729
TaqI TCGA 4 cut(s) 36, 127, 642, 850
TaqII GACCGA 1 cut(s) 53
TatI WGTACW 1 cut(s) 608
TauI GCSGC 1 cut(s) 1580
TfiI GAWTC 6 cut(s) 294, 401, 872, 1064, 1373, 1538
Tru1I TTAA 5 cut(s) 368, 534, 680, 891, 1771
Tru9I TTAA 5 cut(s) 368, 534, 680, 891, 1771
TscAI CASTG 3 cut(s) 493, 850, 1129
TseI GCWGC 5 cut(s) 544, 767, 782, 785, 920
TspDTI ATGAA 7 cut(s) 47, 618, 696, 885, 989, 1587, 1658
TspGWI ACGGA 1 cut(s) 1757
TspRI CASTG 3 cut(s) 493, 850, 1129
Tth111I GACNNNGTC 1 cut(s) 1725
VneI GTGCAC 1 cut(s) 1125
VpaK11BI GGWCC 2 cut(s) 65, 91
VspI ATTAAT 1 cut(s) 891
XapI RAATTY 4 cut(s) 6, 54, 493, 1157
XceI RCATGY 3 cut(s) 463, 1382, 1552
XcmI CCANNNNNNNNNTGG 2 cut(s) 152, 1541
XmnI GAANNNNTTC 1 cut(s) 1288
XspI CTAG 3 cut(s) 1005, 1110, 1679
ZraI GACGTC 1 cut(s) 1727
ZrmI AGTACT 1 cut(s) 610
Zsp2I ATGCAT 3 cut(s) 117, 461, 465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.