RLG00000022537

Exosome component 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0004155
Physical Location & Seq
Forward (+)
3012717 .. 3020938
8222 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022537

Sequence Viewer

Length: 2550 bp
ATGAGCCATGAGTCGACTCCGCCACCGCCGGCGAGGGCCCAATTGCTCCAAAACCTAGCCACAGCCACAGGCAACCTCTCTGGCTCCTCGCGAGTCATACCTTCGGGAGAGGACTTCTACTACTACCGCAATTTCGACGAATTCAAACTCCCAATCGAAGAAATGGCAAAGCAATCTCAGTCCATGCTCGAATCGATTGGGTCGTCGGCAAGCCTCGAGATGGCTTTCCCCAAGGATTTGGATTTGGAGGACGCCTACGATTGGCTGGTCAATTTGAACGACGAGGTCCTCGAGAGGGTGGACGCGTCGGTGGACGAGTTTAAGAGGAGCAGAAACAGGAAGGAGAAGGAAGACAACGAGGGGTTCCAGTTGGTGTGTGGGAAGAAGAAGAAGGGGGATCAGGCCTTGTCCAAGGACAACAAGACTAGCAAGCCCAAGGTCTCCTTTCATGTTCCCTCCATTCGCAAGCCTCAGGAGGAGTTTAACATTCTCGTTCACAATTCAAACCAGCCCTTTGAGCATGTTTGGCTCGAGGCTAGTGACGATGGTCACCGCTTTCTTCATCCCCTGGAAAAGCTCTCAGTTCTTGATTTTATTGACGATGATATTGGGGGGGTTGAGCCTGTAAAACCGCCAGAACTAGAGGCTACCCCATTCAAGCTTGTGGAGGAGGTCAAAGATCTCAAGGAGCTGGCAGCTAAGTTGCGTGGCGTTAATGAATTTGCGGTTGATTTGGAGCACAACCAATATCGATCCTTCCAAGGATTGACTTGTTTGATGCAAATTTCTACAAGAACTGAAGATTTTATAGTAGATACTTTGAAGCTTAGAATTCATATCGGTCCATATCTTAGGGAAGTTTTCAAGGACCCTTCTAAGAGAAAGGTGATGCATGGAGCAGATCGAGATATTGTGTGGCTCCAACGTGATTTTGGCATTTATATCTGCAATTTGTTTGACACCGGTCAGGCCTCAAGGGTATTGAAATTGGAGAGAAATAGTTTGGAATATCTTTTGCATCACTTTTGTGATGTTTCTGCCAACAAAGAATACCAGAATGCAGACTGGAGATTCCGCCCTCTTACCAAAGAGATGGTCAGATATGCCAGAGAAGATACACACTACCTGTTACACATATATGATTTAATGAGAGCGAAGTTATCTTCCATGCCAAAGGAATCTGAAAACTCCGATGCTCCTTTAGTAGAGGTTTACAGGCGCAGTTATGATATATGCATGCATCTCTATGAGAAGGAAGTTTTCACTGAGAATTCCTATCTCCACATATATGGGTTGCAGGGTGCTTGTTTTAATTCTCAGCAGCTTGCCGTTGTTTCTGGTTTATATGAGTGGCGGGATGTTGTTGCTCGTACAGAGGATGAAAGTACTGGCTATATATTACCAAACAAAACTCTACTCGAACTTGCTAAACAGATGCCTGACACAACTAACAAGTTGAGGCGATTGGTGAAATCAAAGCATTCATACATTGAGCAACATCTTTCTTCTGTTGTTAGTGTCATTAGGCACTCTATGCAGAATGCTGCCTTTTTTGAGGCTGCAGCCGAACATCTGAAGGTGGGACATGTGGAAATGGCATCTGAAGAAAATGCGTTGGTCAGTGATCGATCTGAACCCTTACCAGATGAATCTGGATGCAATTCAATTAATGGTGATGCATCTGCACCTTCACCAGCTGCTCCGCCTCATAAAGAGGAGGTCACAGAGCATGGATGTGGTGCCTCCAATGGAGAAGGAGAGGTTGGATTTGAAGTTCATCCTAGAGACAACATTGTAACAGGGAAAAGCAGGGAAGGAAGTAGCATTGGCTGTTCGTTAGAATCTGCAAAGGTGACTGGAGCAACTGTTCAGGTGCAAAAGAAGCCTAGTCGTGCTTTCAGTGCACTCTTGGGGACTGCAGTTCCAAAAAGAAAATTAGATGCTGGTGTAAAGGACAAGGAAGATAATAAGTTGGAGCAGATTAGATCTTCAGTCAACTTCCCATTCCACTCATTCTCAGGTGGGATGGAGCAATCAAATCCCAAGATTGAAGAACCAGGAAATGGTTCTGAAAATCCCCATTCTGAAATGCCCGTTACCGTATCACCTACCGGTCGGAGTTTAGGGGATATTATAACATTGGAAAATGATTCACATGTACCTGAGCACCAGAAGAATAACTCGGTGGCTTCTGCTTTAGGCATGGATGGAGAAGATGATCCTATGTCTCTCTCAGAGTTGTCCTCAAGCTTCAAGAAATGCTTTCCGCCACCTAATCAAAATAGGAAAGCCAGAGAACTGGAGAAATCCCAGGAATCTGGTGGCTTGCAGGTGAAACCTTTTGACTATGAAGCGGCAAGGAGACGGGTCATATTTGGTGAAAAGACAGCCAAGGACGCCAGAGCTGGGGGAGAAGGCATGAAGAGCCTGGGTTCAAGGGCTAAGAAAAAAACTCTAGCTGATGGGGATGATGGGTCGAAAGAGCTGCCACAAGGGAGACGACGTCAAGCTTTTCCAGCAACAGGAAATAGAAGTGCAACTTTCCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000175 GO:0000178 GO:0000460 GO:0000785 GO:0000956 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006364 GO:0006396 GO:0006401 GO:0006402 GO:0006403 GO:0006725 GO:0006807 GO:0007549 GO:0008150 GO:0008152 GO:0008298 GO:0008334 GO:0008408 GO:0009048 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0010639 GO:0016070 GO:0016071 GO:0016072 GO:0016075 GO:0016458 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019219 GO:0019222 GO:0019439 GO:0022613 GO:0031047 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032204 GO:0032205 GO:0032210 GO:0032211 GO:0032259 GO:0032268 GO:0032270 GO:0032879 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0035327 GO:0040029 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043632 GO:0043633 GO:0043634 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044728 GO:0045934 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051246 GO:0051247 GO:0051641 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0071025 GO:0071027 GO:0071028 GO:0071029 GO:0071030 GO:0071033 GO:0071034 GO:0071035 GO:0071043 GO:0071044 GO:0071046 GO:0071048 GO:0071704 GO:0071840 GO:0080090 GO:0080188 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1902275 GO:1902464 GO:1902466 GO:1902494 GO:1904356 GO:1904357 GO:1904872 GO:1905269 GO:1905354 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
DNA_pol_A_exo1 HRDC PMC2NT

Protein Analysis

850

Amino Acids

95.15

Weight (kDa)

5.82

Isoelectric Point (pI)

51.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMC2NT PF08066 30 - 108 2.4e-08 PMC2NT (NUC016) domain
DNA_pol_A_exo1 PF01612 222 - 387 6.3e-47 3'-5' exonuclease
HRDC PF00570 441 - 508 9.4e-14 HRDC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2135
AarI CACCTGC 1 cut(s) 2320
AatII GACGTC 1 cut(s) 2506
Acc36I ACCTGC 1 cut(s) 2320
AccB1I GGYRCC 1 cut(s) 1739
AccB7I CCANNNNNTGG 1 cut(s) 2063
AccI GTMKAC 1 cut(s) 14
AccII CGCG 2 cut(s) 91, 305
AclWI GGATC 3 cut(s) 405, 747, 2213
AcsI RAATTY 5 cut(s) 140, 719, 783, 831, 1270
AcuI CTGAAG 4 cut(s) 819, 1595, 1623, 1974
AcyI GRCGYC 3 cut(s) 252, 2397, 2503
AfaI GTAC 3 cut(s) 1372, 1387, 2160
AfiI CCNNNNNNNGG 6 cut(s) 220, 261, 295, 2063, 2406, 2522
AflIII ACRYGT 3 cut(s) 303, 1585, 2155
AgeI ACCGGT 2 cut(s) 962, 2111
AjnI CCWGG 4 cut(s) 567, 2056, 2310, 2427
AjuI GAANNNNNNNTTGG 2 cut(s) 1746, 1778
AleI CACNNNNGTG 1 cut(s) 1026
AloI GAACNNNNNNTCC 4 cut(s) 1758, 1790, 1851, 1883
Alw21I GWGCWC 3 cut(s) 741, 1906, 2169
Alw26I GTCTC 5 cut(s) 445, 1779, 2232, 2356, 2491
Alw44I GTGCAC 1 cut(s) 1902
AlwI GGATC 3 cut(s) 405, 747, 2213
Ama87I CYCGRG 3 cut(s) 215, 290, 530
AoxI GGCC 3 cut(s) 36, 402, 969
ApaI GGGCCC 1 cut(s) 40
ApaLI GTGCAC 1 cut(s) 1902
ApeKI GCWGC 7 cut(s) 695, 1321, 1544, 1559, 1562, 1697, 2485
ApoI RAATTY 5 cut(s) 140, 719, 783, 831, 1270
ArsI GACNNNNNNTTYG 2 cut(s) 1080, 1112
AseI ATTAAT 1 cut(s) 1668
AsiGI ACCGGT 2 cut(s) 962, 2111
Asp700I GAANNNNTTC 1 cut(s) 2065
AspLEI GCGC 1 cut(s) 1221
AspS9I GGNCC 5 cut(s) 36, 37, 286, 842, 868
AsuHPI GGTGA 9 cut(s) 542, 898, 1480, 1683, 1685, 1864, 2097, 2344, 2390
AvaI CYCGRG 3 cut(s) 215, 290, 530
AvaII GGWCC 3 cut(s) 286, 842, 868
AxyI CCTNAGG 1 cut(s) 471
BaeGI GKGCMC 2 cut(s) 40, 1906
BanI GGYRCC 1 cut(s) 1739
BanII GRGCYC 1 cut(s) 40
BbsI GAAGAC 1 cut(s) 357
Bbv12I GWGCWC 3 cut(s) 741, 1906, 2169
BbvI GCAGC 7 cut(s) 707, 1333, 1531, 1546, 1574, 1684, 2472
BccI CCATC 7 cut(s) 214, 539, 1087, 2020, 2201, 2456, 2465
BceAI ACGGC 1 cut(s) 1313
BcgI CGANNNNNNTGC 2 cut(s) 2467, 2501
BciT130I CCWGG 4 cut(s) 569, 2058, 2312, 2429
BcoDI GTCTC 5 cut(s) 445, 1779, 2232, 2356, 2491
BfaI CTAG 7 cut(s) 56, 426, 537, 641, 1782, 1887, 2456
BfmI CTRYAG 2 cut(s) 1560, 1917
BfuAI ACCTGC 1 cut(s) 2320
BglII AGATCT 2 cut(s) 679, 1985
BisI GCNGC 8 cut(s) 696, 1322, 1545, 1560, 1563, 1698, 2355, 2486
BlsI GCNGC 8 cut(s) 697, 1323, 1546, 1561, 1564, 1699, 2356, 2487
BmcAI AGTACT 1 cut(s) 1387
Bme1390I CCNGG 4 cut(s) 569, 2058, 2312, 2429
Bme18I GGWCC 3 cut(s) 286, 842, 868
BmeT110I CYCGRG 3 cut(s) 215, 290, 530
BmgT120I GGNCC 5 cut(s) 36, 37, 286, 842, 868
BmiI GGNNCC 6 cut(s) 38, 85, 365, 870, 920, 1741
BmrFI CCNGG 4 cut(s) 569, 2058, 2312, 2429
BoxI GACNNNNGTC 2 cut(s) 546, 963
BpiI GAAGAC 1 cut(s) 357
BplI GAGNNNNNCTC 2 cut(s) 2228, 2260
BpmI CTGGAG 3 cut(s) 1087, 1878, 2321
Bpu10I CCTNAGC 1 cut(s) 2163
BpuEI CTTGAG 3 cut(s) 668, 958, 2230
Bsa29I ATCGAT 3 cut(s) 194, 751, 1627
BsaHI GRCGYC 3 cut(s) 252, 2397, 2503
BsaI GGTCTC 1 cut(s) 445
BsaJI CCNNGG 8 cut(s) 231, 411, 435, 567, 760, 2310, 2391, 2428
BsaWI WCCGGW 2 cut(s) 962, 2111
BsaXI ACNNNNNCTCC 4 cut(s) 1851, 1881, 2488, 2518
Bsc4I CCNNNNNNNGG 6 cut(s) 220, 261, 295, 2063, 2406, 2522
Bse118I RCCGGY 3 cut(s) 28, 962, 2111
Bse1I ACTGG 5 cut(s) 367, 1070, 1393, 1861, 2304
Bse21I CCTNAGG 1 cut(s) 471
BseBI CCWGG 4 cut(s) 569, 2058, 2312, 2429
BseCI ATCGAT 3 cut(s) 194, 751, 1627
BseDI CCNNGG 8 cut(s) 231, 411, 435, 567, 760, 2310, 2391, 2428
BseGI GGATG 9 cut(s) 562, 1363, 1384, 1661, 1739, 1777, 2031, 2212, 2473
BseLI CCNNNNNNNGG 6 cut(s) 220, 261, 295, 2063, 2406, 2522
BseMII CTCAG 8 cut(s) 191, 485, 594, 1257, 1331, 2031, 2154, 2247
BseNI ACTGG 5 cut(s) 367, 1070, 1393, 1861, 2304
BseRI GAGGAG 5 cut(s) 76, 340, 491, 683, 1730
BseSI GKGCMC 2 cut(s) 40, 1906
BseXI GCAGC 7 cut(s) 707, 1333, 1531, 1546, 1574, 1684, 2472
BseYI CCCAGC 1 cut(s) 2405
BsgI GTGCAG 1 cut(s) 1668
Bsh1236I CGCG 2 cut(s) 91, 305
Bsh1285I CGRYCG 1 cut(s) 2116
BshFI GGCC 3 cut(s) 38, 404, 971
BshNI GGYRCC 1 cut(s) 1739
BshTI ACCGGT 2 cut(s) 962, 2111
BshVI ATCGAT 3 cut(s) 194, 751, 1627
BsiEI CGRYCG 1 cut(s) 2116
BsiHKAI GWGCWC 3 cut(s) 741, 1906, 2169
BsiHKCI CYCGRG 3 cut(s) 215, 290, 530
BsiSI CCGG 3 cut(s) 29, 963, 2112
BslFI GGGAC 2 cut(s) 1596, 1927
BslI CCNNNNNNNGG 6 cut(s) 220, 261, 295, 2063, 2406, 2522
BsmAI GTCTC 5 cut(s) 445, 1779, 2232, 2356, 2491
BsmBI CGTCTC 2 cut(s) 2356, 2491
BsmFI GGGAC 2 cut(s) 1596, 1927
BsmI GAATGC 3 cut(s) 1063, 1480, 1546
BsnI GGCC 3 cut(s) 38, 404, 971
Bso31I GGTCTC 1 cut(s) 445
BsoBI CYCGRG 3 cut(s) 215, 290, 530
Bsp120I GGGCCC 1 cut(s) 36
Bsp1286I GDGCHC 4 cut(s) 40, 741, 1906, 2169
Bsp143I GATC 8 cut(s) 397, 679, 752, 901, 1624, 1628, 1985, 2218
Bsp68I TCGCGA 1 cut(s) 91
BspANI GGCC 3 cut(s) 38, 404, 971
BspCNI CTCAG 8 cut(s) 190, 484, 593, 1258, 1330, 2030, 2155, 2246
BspDI ATCGAT 3 cut(s) 194, 751, 1627
BspFNI CGCG 2 cut(s) 91, 305
BspLI GGNNCC 6 cut(s) 38, 85, 365, 870, 920, 1741
BspMAI CTGCAG 2 cut(s) 1564, 1921
BspMI ACCTGC 1 cut(s) 2320
BspPI GGATC 3 cut(s) 405, 747, 2213
BspQI GCTCTTC 1 cut(s) 2417
BspT107I GGYRCC 1 cut(s) 1739
BspTNI GGTCTC 1 cut(s) 445
BsrFI RCCGGY 3 cut(s) 28, 962, 2111
BsrI ACTGG 5 cut(s) 367, 1070, 1393, 1861, 2304
BssAI RCCGGY 3 cut(s) 28, 962, 2111
BssECI CCNNGG 8 cut(s) 231, 411, 435, 567, 760, 2310, 2391, 2428
BssMI GATC 8 cut(s) 397, 679, 752, 901, 1624, 1628, 1985, 2218
BssNI GRCGYC 3 cut(s) 252, 2397, 2503
BssT1I CCWWGG 5 cut(s) 231, 411, 435, 760, 2391
Bst2UI CCWGG 4 cut(s) 569, 2058, 2312, 2429
Bst4CI ACNGT 2 cut(s) 1867, 2101
Bst6I CTCTTC 1 cut(s) 2417
BstACI GRCGYC 3 cut(s) 252, 2397, 2503
BstAPI GCANNNNNTGC 1 cut(s) 1534
BstC8I GCNNGC 8 cut(s) 30, 211, 431, 467, 693, 1238, 1326, 2327
BstEII GGTNACC 1 cut(s) 548
BstF5I GGATG 9 cut(s) 562, 1363, 1384, 1661, 1739, 1777, 2031, 2212, 2473
BstFNI CGCG 2 cut(s) 91, 305
BstHHI GCGC 1 cut(s) 1221
BstKTI GATC 8 cut(s) 400, 682, 755, 904, 1627, 1631, 1988, 2221
BstMAI GTCTC 5 cut(s) 445, 1779, 2232, 2356, 2491
BstMBI GATC 8 cut(s) 397, 679, 752, 901, 1624, 1628, 1985, 2218
BstMCI CGRYCG 1 cut(s) 2116
BstMWI GCNNNNNNNGC 8 cut(s) 517, 526, 1534, 1882, 1901, 2396, 2424, 2516
BstNI CCWGG 4 cut(s) 569, 2058, 2312, 2429
BstNSI RCATGY 4 cut(s) 524, 1240, 1589, 2159
BstPAI GACNNNNGTC 2 cut(s) 546, 963
BstPI GGTNACC 1 cut(s) 548
BstSCI CCNGG 4 cut(s) 567, 2056, 2310, 2427
BstSFI CTRYAG 2 cut(s) 1560, 1917
BstSLI GKGCMC 2 cut(s) 40, 1906
BstUI CGCG 2 cut(s) 91, 305
BstV1I GCAGC 7 cut(s) 707, 1333, 1531, 1546, 1574, 1684, 2472
BstV2I GAAGAC 1 cut(s) 357
BstX2I RGATCY 2 cut(s) 679, 1985
BstXI CCANNNNNNTGG 5 cut(s) 238, 1093, 1289, 2299, 2318
BstYI RGATCY 2 cut(s) 679, 1985
Bsu15I ATCGAT 3 cut(s) 194, 751, 1627
Bsu36I CCTNAGG 1 cut(s) 471
BsuRI GGCC 3 cut(s) 38, 404, 971
BsuTUI ATCGAT 3 cut(s) 194, 751, 1627
BtsCI GGATG 9 cut(s) 562, 1363, 1384, 1661, 1739, 1777, 2031, 2212, 2473
BtsIMutI CAGTG 3 cut(s) 1263, 1627, 1906
BtuMI TCGCGA 1 cut(s) 91
BveI ACCTGC 1 cut(s) 2320
Cac8I GCNNGC 8 cut(s) 30, 211, 431, 467, 693, 1238, 1326, 2327
CfoI GCGC 1 cut(s) 1221
Cfr10I RCCGGY 3 cut(s) 28, 962, 2111
Cfr13I GGNCC 5 cut(s) 36, 37, 286, 842, 868
ClaI ATCGAT 3 cut(s) 194, 751, 1627
CseI GACGC 4 cut(s) 260, 294, 311, 2405
Csp6I GTAC 3 cut(s) 1371, 1386, 2159
CspAI ACCGGT 2 cut(s) 962, 2111
CviQI GTAC 3 cut(s) 1371, 1386, 2159
DpnI GATC 8 cut(s) 399, 681, 754, 903, 1626, 1630, 1987, 2220
DpnII GATC 8 cut(s) 397, 679, 752, 901, 1624, 1628, 1985, 2218
Eam1104I CTCTTC 1 cut(s) 2417
EarI CTCTTC 1 cut(s) 2417
EciI GGCGGA 4 cut(s) 9, 1064, 1692, 2256
Eco130I CCWWGG 5 cut(s) 231, 411, 435, 760, 2391
Eco147I AGGCCT 2 cut(s) 404, 971
Eco24I GRGCYC 1 cut(s) 40
Eco31I GGTCTC 1 cut(s) 445
Eco47I GGWCC 3 cut(s) 286, 842, 868
Eco57I CTGAAG 4 cut(s) 819, 1595, 1623, 1974
Eco81I CCTNAGG 1 cut(s) 471
Eco88I CYCGRG 3 cut(s) 215, 290, 530
Eco91I GGTNACC 1 cut(s) 548
EcoO109I RGGNCCY 3 cut(s) 36, 286, 868
EcoO65I GGTNACC 1 cut(s) 548
EcoRI GAATTC 3 cut(s) 140, 831, 1270
EcoRII CCWGG 4 cut(s) 567, 2056, 2310, 2427
EcoT14I CCWWGG 5 cut(s) 231, 411, 435, 760, 2391
EcoT22I ATGCAT 4 cut(s) 894, 1238, 1242, 1681
EcoT38I GRGCYC 1 cut(s) 40
ErhI CCWWGG 5 cut(s) 231, 411, 435, 760, 2391
Esp3I CGTCTC 2 cut(s) 2356, 2491
FalI AAGNNNNNCTT 5 cut(s) 428, 460, 2246, 2278, 2524
FaqI GGGAC 2 cut(s) 1596, 1927
FauI CCCGC 1 cut(s) 1347
FblI GTMKAC 1 cut(s) 14
Fnu4HI GCNGC 8 cut(s) 696, 1322, 1545, 1560, 1563, 1698, 2355, 2486
FokI GGATG 9 cut(s) 549, 1370, 1391, 1668, 1746, 1764, 2038, 2219, 2480
FriOI GRGCYC 1 cut(s) 40
Fsp4HI GCNGC 8 cut(s) 696, 1322, 1545, 1560, 1563, 1698, 2355, 2486
FspBI CTAG 7 cut(s) 56, 426, 537, 641, 1782, 1887, 2456
GlaI GCGC 1 cut(s) 1220
GluI GCNGC 8 cut(s) 696, 1322, 1545, 1560, 1563, 1698, 2355, 2486
GsaI CCCAGC 1 cut(s) 2409
GsuI CTGGAG 3 cut(s) 1087, 1878, 2321
HaeIII GGCC 3 cut(s) 38, 404, 971
HapII CCGG 3 cut(s) 29, 963, 2112
HgaI GACGC 4 cut(s) 260, 294, 311, 2405
HhaI GCGC 1 cut(s) 1221
Hin1I GRCGYC 3 cut(s) 252, 2397, 2503
Hin6I GCGC 1 cut(s) 1219
HinP1I GCGC 1 cut(s) 1219
HincII GTYRAC 2 cut(s) 15, 1996
HindII GTYRAC 2 cut(s) 15, 1996
HindIII AAGCTT 4 cut(s) 659, 824, 2248, 2508
HpaII CCGG 3 cut(s) 29, 963, 2112
HphI GGTGA 9 cut(s) 542, 898, 1480, 1683, 1685, 1864, 2097, 2344, 2390
Hpy166II GTNNAC 7 cut(s) 15, 301, 313, 496, 1213, 1904, 1996
Hpy188III TCNNGA 9 cut(s) 90, 105, 217, 292, 473, 587, 905, 1653, 2254
Hpy8I GTNNAC 7 cut(s) 15, 301, 313, 496, 1213, 1904, 1996
Hpy99I CGWCG 5 cut(s) 140, 208, 284, 310, 2505
HpyCH4III ACNGT 2 cut(s) 1867, 2101
HpyCH4IV ACGT 2 cut(s) 925, 2503
HpyF10VI GCNNNNNNNGC 8 cut(s) 517, 526, 1534, 1882, 1901, 2396, 2424, 2516
HpySE526I ACGT 2 cut(s) 925, 2503
Hsp92I GRCGYC 3 cut(s) 252, 2397, 2503
HspAI GCGC 1 cut(s) 1219
KroI GCCGGC 1 cut(s) 28
KroNI GCCGGC 1 cut(s) 30
Kzo9I GATC 8 cut(s) 397, 679, 752, 901, 1624, 1628, 1985, 2218
LguI GCTCTTC 1 cut(s) 2417
Lsp1109I GCAGC 7 cut(s) 707, 1333, 1531, 1546, 1574, 1684, 2472
MaeI CTAG 7 cut(s) 56, 426, 537, 641, 1782, 1887, 2456
MaeII ACGT 2 cut(s) 925, 2503
MaeIII GTNAC 7 cut(s) 539, 548, 1128, 1720, 1795, 1852, 2095
MalI GATC 8 cut(s) 399, 681, 754, 903, 1626, 1630, 1987, 2220
MboI GATC 8 cut(s) 397, 679, 752, 901, 1624, 1628, 1985, 2218
MfeI CAATTG 1 cut(s) 41
MflI RGATCY 2 cut(s) 679, 1985
MhlI GDGCHC 4 cut(s) 40, 741, 1906, 2169
MluI ACGCGT 1 cut(s) 303
MlyI GAGTC 3 cut(s) 10, 20, 102
MmeI TCCRAC 4 cut(s) 946, 1744, 1953, 2096
Mph1103I ATGCAT 4 cut(s) 894, 1238, 1242, 1681
MreI CGCCGGCG 1 cut(s) 28
MroNI GCCGGC 1 cut(s) 28
MroXI GAANNNNTTC 1 cut(s) 2065
MseI TTAA 7 cut(s) 321, 483, 714, 1145, 1311, 1668, 2548
MslI CAYNNNNRTG 5 cut(s) 1026, 1137, 1245, 1287, 1734
MspA1I CMGCKG 1 cut(s) 1697
MspI CCGG 3 cut(s) 29, 963, 2112
MspR9I CCNGG 4 cut(s) 569, 2058, 2312, 2429
MunI CAATTG 1 cut(s) 41
Mva1269I GAATGC 3 cut(s) 1063, 1480, 1546
MvaI CCWGG 4 cut(s) 569, 2058, 2312, 2429
MvnI CGCG 2 cut(s) 91, 305
MwoI GCNNNNNNNGC 8 cut(s) 517, 526, 1534, 1882, 1901, 2396, 2424, 2516
NaeI GCCGGC 1 cut(s) 30
NdeII GATC 8 cut(s) 397, 679, 752, 901, 1624, 1628, 1985, 2218
NgoMIV GCCGGC 1 cut(s) 28
NlaIV GGNNCC 6 cut(s) 38, 85, 365, 870, 920, 1741
NmuCI GTSAC 4 cut(s) 539, 548, 1720, 1852
NruI TCGCGA 1 cut(s) 91
NsiI ATGCAT 4 cut(s) 894, 1238, 1242, 1681
NspI RCATGY 4 cut(s) 524, 1240, 1589, 2159
OliI CACNNNNGTG 1 cut(s) 1026
PaeI GCATGC 1 cut(s) 1240
PaeR7I CTCGAG 3 cut(s) 215, 290, 530
PaqCI CACCTGC 1 cut(s) 2320
PceI AGGCCT 2 cut(s) 404, 971
PciI ACATGT 2 cut(s) 1585, 2155
PciSI GCTCTTC 1 cut(s) 2417
PcsI WCGNNNNNNNCGW 2 cut(s) 200, 288
PctI GAATGC 3 cut(s) 1063, 1480, 1546
PdiI GCCGGC 1 cut(s) 30
PdmI GAANNNNTTC 1 cut(s) 2065
PfeI GAWTC 7 cut(s) 191, 1071, 1178, 1649, 1841, 2150, 2315
PflFI GACNNNGTC 2 cut(s) 284, 2502
PflMI CCANNNNNTGG 1 cut(s) 2063
PinAI ACCGGT 2 cut(s) 962, 2111
PkrI GCNGC 8 cut(s) 697, 1323, 1546, 1561, 1564, 1699, 2356, 2487
PleI GAGTC 3 cut(s) 10, 19, 101
PpsI GAGTC 3 cut(s) 10, 19, 101
PpuMI RGGWCCY 2 cut(s) 286, 868
PscI ACATGT 2 cut(s) 1585, 2155
PshAI GACNNNNGTC 2 cut(s) 546, 963
PshBI ATTAAT 1 cut(s) 1668
PsiI TTATAA 1 cut(s) 2135
Psp5II RGGWCCY 2 cut(s) 286, 868
Psp6I CCWGG 4 cut(s) 567, 2056, 2310, 2427
PspEI GGTNACC 1 cut(s) 548
PspFI CCCAGC 1 cut(s) 2405
PspGI CCWGG 4 cut(s) 567, 2056, 2310, 2427
PspN4I GGNNCC 6 cut(s) 38, 85, 365, 870, 920, 1741
PspOMI GGGCCC 1 cut(s) 36
PspPI GGNCC 5 cut(s) 36, 37, 286, 842, 868
PspPPI RGGWCCY 2 cut(s) 286, 868
PspXI VCTCGAGB 1 cut(s) 530
PstI CTGCAG 2 cut(s) 1564, 1921
PsuI RGATCY 2 cut(s) 679, 1985
PsyI GACNNNGTC 2 cut(s) 284, 2502
PvuII CAGCTG 1 cut(s) 1697
RruI TCGCGA 1 cut(s) 91
RsaI GTAC 3 cut(s) 1372, 1387, 2160
RsaNI GTAC 3 cut(s) 1371, 1386, 2159
RseI CAYNNNNRTG 5 cut(s) 1026, 1137, 1245, 1287, 1734
SalI GTCGAC 1 cut(s) 13
SapI GCTCTTC 1 cut(s) 2417
SaqAI TTAA 7 cut(s) 321, 483, 714, 1145, 1311, 1668, 2548
SatI GCNGC 8 cut(s) 696, 1322, 1545, 1560, 1563, 1698, 2355, 2486
Sau3AI GATC 8 cut(s) 397, 679, 752, 901, 1624, 1628, 1985, 2218
Sau96I GGNCC 5 cut(s) 36, 37, 286, 842, 868
ScaI AGTACT 1 cut(s) 1387
SchI GAGTC 3 cut(s) 10, 20, 102
ScrFI CCNGG 4 cut(s) 569, 2058, 2312, 2429
SduI GDGCHC 4 cut(s) 40, 741, 1906, 2169
SfcI CTRYAG 2 cut(s) 1560, 1917
Sfr274I CTCGAG 3 cut(s) 215, 290, 530
SgrAI CRCCGGYG 1 cut(s) 28
SinI GGWCC 3 cut(s) 286, 842, 868
SlaI CTCGAG 3 cut(s) 215, 290, 530
SmiMI CAYNNNNRTG 5 cut(s) 1026, 1137, 1245, 1287, 1734
SmlI CTYRAG 6 cut(s) 215, 290, 530, 683, 973, 2245
SmoI CTYRAG 6 cut(s) 215, 290, 530, 683, 973, 2245
SphI GCATGC 1 cut(s) 1240
SseBI AGGCCT 2 cut(s) 404, 971
SspMI CTAG 7 cut(s) 56, 426, 537, 641, 1782, 1887, 2456
StuI AGGCCT 2 cut(s) 404, 971
StyD4I CCNGG 4 cut(s) 567, 2056, 2310, 2427
StyI CCWWGG 5 cut(s) 231, 411, 435, 760, 2391
TaaI ACNGT 2 cut(s) 1867, 2101
TaiI ACGT 2 cut(s) 928, 2506
TaqII GACCGA 1 cut(s) 830
TatI WGTACW 1 cut(s) 1385
TauI GCSGC 1 cut(s) 2357
TfiI GAWTC 7 cut(s) 191, 1071, 1178, 1649, 1841, 2150, 2315
Tru1I TTAA 7 cut(s) 321, 483, 714, 1145, 1311, 1668, 2548
Tru9I TTAA 7 cut(s) 321, 483, 714, 1145, 1311, 1668, 2548
TscAI CASTG 3 cut(s) 1270, 1627, 1906
TseFI GTSAC 4 cut(s) 539, 548, 1720, 1852
TseI GCWGC 7 cut(s) 695, 1321, 1544, 1559, 1562, 1697, 2485
Tsp45I GTSAC 4 cut(s) 539, 548, 1720, 1852
TspGWI ACGGA 1 cut(s) 2534
TspRI CASTG 3 cut(s) 1270, 1627, 1906
Tth111I GACNNNGTC 2 cut(s) 284, 2502
Van91I CCANNNNNTGG 1 cut(s) 2063
VneI GTGCAC 1 cut(s) 1902
VpaK11BI GGWCC 3 cut(s) 286, 842, 868
VspI ATTAAT 1 cut(s) 1668
XapI RAATTY 5 cut(s) 140, 719, 783, 831, 1270
XceI RCATGY 4 cut(s) 524, 1240, 1589, 2159
XcmI CCANNNNNNNNNTGG 3 cut(s) 374, 929, 2318
XhoI CTCGAG 3 cut(s) 215, 290, 530
XmiI GTMKAC 1 cut(s) 14
XmnI GAANNNNTTC 1 cut(s) 2065
XspI CTAG 7 cut(s) 56, 426, 537, 641, 1782, 1887, 2456
ZraI GACGTC 1 cut(s) 2504
ZrmI AGTACT 1 cut(s) 1387
Zsp2I ATGCAT 4 cut(s) 894, 1238, 1242, 1681
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.