Rh3AG328400

Exosome component 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0004155
Physical Location & Seq
Reverse (-)
46726394 .. 46734866
8473 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG328400.1

Sequence Viewer

Length: 2391 bp
ATGAGCCATGAGCCGACTCCGCCACCGCCGGCGAGGGCCCAATTGCTCCAAAACCTAGCGACAGCCACAGCCAACCTGTCTGGCTCCTCGCGAGTCATACCTTCGGGAGAGGACTTCTACTACTACCGCAATTTCGACGAATTCAAACTGCCAATCGAAGAAATTGCAAAGCAATCTCAGTCCATGCTCGAATCGATTGGGTCGTCGGCAAGCCTCGGGATGGCTTTCCCCAAGGATTTGGATTTGGAGGACGCCTACGATTGGCTGGTCAATGTGAACGACGAGGTCCTCGAGAGGGTGGACGCGTCGGTGGACGAGTTTAAGAGGAGCAGGAACAAGGAGAAGGAAGACGACGAGGGGTTCCAGTTGGTGTGTGGGAAGAAGAAGAAGGGGGATCAGACCTTGTCCAAGGACAACAAGACTAGCAAGCCCAAGGTCTCGTTTCATGTTCCCTCCATTCGCAAGCCTCAGGAGGAGTTTAACATTCTCGTTAACAATTCAAACCAGCCCTTTGAGCATGTTTGGCTCGGCACTGGTGACGATGGTCACCGCTTTCTTCATCCCCTGGTTGATTTGGAGCACAACCAATATCGATCCTTCCAAGGATTGACTTGTTTGATGCAAATTTCTACAAGAACTGAAGATTTTATACTAGATACTTTGAAGCTTAGAATTCATATCGGTCCATATCTTAGGGAAGTTTTCAAGGACCCTTCTAAGAGAAAGGTGATGCATGGAGCAGATCGAGATATTGTGTGGCTCCAACGTGATTTTGGCATTTATATCTGCAATTTGTTTGACACTGGCCAGGCCTCAAGGGTATTGAAATTGGAGAGAAATAGTTTGGAATATCTTTTGCATCACTTTTGTGATGTTTCTGCCAACAAAGAATACCAGAATGCAGACTGGAGATTCCGCCCTCTTACCAAAGAGATGGTCAGATATGCCAGAGAAGATACACACTACCTGTTACACATATATGATTTAATGAGAGCGAAGTTATCTTCCATGCCAAAGGAATCTGAAAATTCCGATGCTCCTTTAGTAGAGGTTTACAGGCGCAGTTATGATATATGCATGCATCTCTATGCGAAGGAAGTTTTCACTGAGAATTCCTATCTCCACATATATGGGTTGCAGGGTGCTTGTTTTAATTCTCAGCAGCTTGCCGTTGTTTCCGGTTTATATGAGTGGCGGGATGTTGTTGCTCGTACAGAGGATGAAAGTACTGGCTATATATTACCAAACAAAACTCTACTCGAACTTGCTAAACAGATGCCTGACACAACTAACAAGTTAAGACGATTGGTGAAATCAAAGCATTCATACATTGAGCAGCATCTTTCTTCTGTTGTTAGCGTCATTAGGCACTCTATGCAGAATGCTGCCTTTTTTGAGGCTGCAGCCGAACATCTGAAGGTGGGACGTGTGGAAATGGCATCTGAAGAAAATGTGTTGGTCAGTGATCGATCTGAACCCTTACCAGATGAATCTGGATGCAATTTAATTAATGGTGATGTATCTGCACCTTCACCAGCTGCTCCGCCTCATAAAGAGGACTTTAGAGAGCATGGATGTGGTGCCTCCAATGGAGAAGGAAATGTTGGATTTGAAGTTCATCCTAGAGACAACATTGTTACAGGGAAAAGCAGGAAAGGAAGTAGCATTGGCTGTTCCTTAGAATCTGCAAAGGTTACTGGAGCAACTGTTCAGGTGCAAAAGAAGCCTAGTCGTGCTTTCAGTGCACTCTTGGGGACTGCAGTTCCAAAAAGAAAATTTGATGCTGGTGTCAAGGACAAGGAAGATAATAAGTTGGAGCAGATTAGATCTTCAGTCAATTTCCCATTCCACTCATTCTCAGGTGGGATGGAGCAATCAAATCCCAAGATTGAAGAACCAGGAAAAGGTTCTGAAAATCCCCATTCTGAAATGCCCGTTACTGTATCACCTACCAGGCGGAGTTTAGGAGATATTATAACATTAGAAAATGATTCACATGTACCTGAGCACAAGGAGGATAACTCGGTGGCTTCTGCTTTAGGCATGGATGGAGAAGATGATCCTATGTCTCTCTCAGAGTTGTCCTCAAGCTTCAAGAAATGCTTTCCGCCGCCTAATCAAAATAGGAAAGCCAGAGAACTGGAGAAATCCCAGGAATCTGGTGGCTTGCAGGTGAAACCTTTTGACTATGAAGCGGCAAGGAGACAGGTCATATTTGGAGAAAAGACAGCCAAGGACGCCAGAGCTGGGGGAGAAGGCATGAAGAGCCTGGGTTCAAGGGCTAAGAAAAAAACTCTAGTTGATGGGGATGATGGGTCAAAAGAGCTACCACAAGGGAGACGACGTCAAGCTTTTCCAGCAACAGGAAATAGAAGTGCAACTTTCCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000175 GO:0000178 GO:0000460 GO:0000785 GO:0000956 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006364 GO:0006396 GO:0006401 GO:0006402 GO:0006403 GO:0006725 GO:0006807 GO:0007549 GO:0008150 GO:0008152 GO:0008298 GO:0008334 GO:0008408 GO:0009048 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0010639 GO:0016070 GO:0016071 GO:0016072 GO:0016075 GO:0016458 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019219 GO:0019222 GO:0019439 GO:0022613 GO:0031047 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032204 GO:0032205 GO:0032210 GO:0032211 GO:0032259 GO:0032268 GO:0032270 GO:0032879 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0035327 GO:0040029 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043632 GO:0043633 GO:0043634 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044728 GO:0045934 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051246 GO:0051247 GO:0051641 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0071025 GO:0071027 GO:0071028 GO:0071029 GO:0071030 GO:0071033 GO:0071034 GO:0071035 GO:0071043 GO:0071044 GO:0071046 GO:0071048 GO:0071704 GO:0071840 GO:0080090 GO:0080188 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1902275 GO:1902464 GO:1902466 GO:1902494 GO:1904356 GO:1904357 GO:1904872 GO:1905269 GO:1905354 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
DNA_pol_A_exo1 HRDC PMC2NT

Protein Analysis

796

Amino Acids

89.4

Weight (kDa)

6.31

Isoelectric Point (pI)

54.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMC2NT PF08066 30 - 108 9.1e-09 PMC2NT (NUC016) domain
DNA_pol_A_exo1 PF01612 190 - 334 1.6e-41 3'-5' exonuclease
HRDC PF00570 388 - 455 8.6e-14 HRDC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1976
AarI CACCTGC 1 cut(s) 2161
AatII GACGTC 1 cut(s) 2347
Acc36I ACCTGC 1 cut(s) 2161
AccB1I GGYRCC 1 cut(s) 1580
AccII CGCG 2 cut(s) 91, 305
AclWI GGATC 3 cut(s) 402, 588, 2054
AcoI YGGCCR 1 cut(s) 805
AcsI RAATTY 6 cut(s) 140, 624, 672, 1027, 1111, 1775
AcuI CTGAAG 4 cut(s) 660, 1436, 1464, 1815
AcyI GRCGYC 3 cut(s) 252, 2238, 2344
AfaI GTAC 3 cut(s) 1213, 1228, 2001
AfiI CCNNNNNNNGG 6 cut(s) 220, 261, 295, 1904, 2247, 2363
AflIII ACRYGT 3 cut(s) 303, 1426, 1996
AgsI TTSAA 9 cut(s) 145, 501, 664, 706, 826, 1613, 1892, 2095, 2277
AjiI CACGTC 1 cut(s) 1427
AjnI CCWGG 6 cut(s) 564, 807, 1897, 1952, 2151, 2268
AjuI GAANNNNNNNTTGG 2 cut(s) 1587, 1619
AleI CACNNNNGTG 1 cut(s) 867
AloI GAACNNNNNNTCC 4 cut(s) 1599, 1631, 1692, 1724
AluBI AGCT 7 cut(s) 667, 1165, 1538, 2091, 2246, 2326, 2351
AluI AGCT 7 cut(s) 667, 1165, 1538, 2091, 2246, 2326, 2351
Alw21I GWGCWC 3 cut(s) 582, 1747, 2010
Alw26I GTCTC 5 cut(s) 442, 1620, 2073, 2197, 2332
Alw44I GTGCAC 1 cut(s) 1743
AlwI GGATC 3 cut(s) 402, 588, 2054
Ama87I CYCGRG 2 cut(s) 215, 290
AoxI GGCC 3 cut(s) 36, 805, 810
ApaI GGGCCC 1 cut(s) 40
ApaLI GTGCAC 1 cut(s) 1743
ApeKI GCWGC 6 cut(s) 1162, 1336, 1385, 1400, 1403, 1538
ApoI RAATTY 6 cut(s) 140, 624, 672, 1027, 1111, 1775
ArsI GACNNNNNNTTYG 2 cut(s) 921, 953
AseI ATTAAT 1 cut(s) 1509
Asp700I GAANNNNTTC 1 cut(s) 1906
AspLEI GCGC 1 cut(s) 1062
AspS9I GGNCC 5 cut(s) 36, 37, 286, 683, 709
AsuHPI GGTGA 8 cut(s) 539, 548, 739, 1321, 1524, 1526, 1938, 2185
AvaI CYCGRG 2 cut(s) 215, 290
AvaII GGWCC 3 cut(s) 286, 683, 709
AxyI CCTNAGG 1 cut(s) 468
BaeGI GKGCMC 2 cut(s) 40, 1747
BalI TGGCCA 1 cut(s) 807
BanI GGYRCC 1 cut(s) 1580
BanII GRGCYC 1 cut(s) 40
BarI GAAGNNNNNNTAC 2 cut(s) 633, 665
BbsI GAAGAC 1 cut(s) 354
Bbv12I GWGCWC 3 cut(s) 582, 1747, 2010
BbvI GCAGC 6 cut(s) 1174, 1348, 1372, 1387, 1415, 1525
BccI CCATC 7 cut(s) 214, 536, 928, 1861, 2042, 2297, 2306
BceAI ACGGC 1 cut(s) 1154
BcgI CGANNNNNNTGC 2 cut(s) 146, 180
BciT130I CCWGG 6 cut(s) 566, 809, 1899, 1954, 2153, 2270
BcoDI GTCTC 5 cut(s) 442, 1620, 2073, 2197, 2332
BfaI CTAG 6 cut(s) 56, 423, 653, 1623, 1728, 2297
BfmI CTRYAG 2 cut(s) 1401, 1758
BfuAI ACCTGC 1 cut(s) 2161
BglII AGATCT 1 cut(s) 1826
BisI GCNGC 8 cut(s) 1163, 1337, 1386, 1401, 1404, 1539, 2111, 2196
BlsI GCNGC 8 cut(s) 1164, 1338, 1387, 1402, 1405, 1540, 2112, 2197
BmcAI AGTACT 1 cut(s) 1228
Bme1390I CCNGG 6 cut(s) 566, 809, 1899, 1954, 2153, 2270
Bme18I GGWCC 3 cut(s) 286, 683, 709
BmeT110I CYCGRG 2 cut(s) 215, 290
BmgBI CACGTC 1 cut(s) 1427
BmgT120I GGNCC 5 cut(s) 36, 37, 286, 683, 709
BmiI GGNNCC 6 cut(s) 38, 85, 362, 711, 761, 1582
BmrFI CCNGG 6 cut(s) 566, 809, 1899, 1954, 2153, 2270
BoxI GACNNNNGTC 1 cut(s) 543
BpiI GAAGAC 1 cut(s) 354
BplI GAGNNNNNCTC 4 cut(s) 2006, 2038, 2069, 2101
BpmI CTGGAG 3 cut(s) 928, 1719, 2162
Bpu10I CCTNAGC 1 cut(s) 2004
BpuEI CTTGAG 2 cut(s) 799, 2071
Bsa29I ATCGAT 3 cut(s) 194, 592, 1468
BsaHI GRCGYC 3 cut(s) 252, 2238, 2344
BsaI GGTCTC 1 cut(s) 442
BsaJI CCNNGG 9 cut(s) 214, 231, 408, 432, 564, 601, 2151, 2232, 2269
BsaWI WCCGGW 1 cut(s) 1178
BsaXI ACNNNNNCTCC 4 cut(s) 1692, 1722, 2329, 2359
Bsc4I CCNNNNNNNGG 6 cut(s) 220, 261, 295, 1904, 2247, 2363
Bse118I RCCGGY 1 cut(s) 28
Bse1I ACTGG 7 cut(s) 364, 538, 808, 911, 1234, 1702, 2145
Bse21I CCTNAGG 1 cut(s) 468
BseBI CCWGG 6 cut(s) 566, 809, 1899, 1954, 2153, 2270
BseCI ATCGAT 3 cut(s) 194, 592, 1468
BseDI CCNNGG 9 cut(s) 214, 231, 408, 432, 564, 601, 2151, 2232, 2269
BseLI CCNNNNNNNGG 6 cut(s) 220, 261, 295, 1904, 2247, 2363
BseMII CTCAG 7 cut(s) 191, 482, 1098, 1172, 1872, 1995, 2088
BseNI ACTGG 7 cut(s) 364, 538, 808, 911, 1234, 1702, 2145
BseRI GAGGAG 3 cut(s) 76, 340, 488
BseSI GKGCMC 2 cut(s) 40, 1747
BseXI GCAGC 6 cut(s) 1174, 1348, 1372, 1387, 1415, 1525
BseYI CCCAGC 1 cut(s) 2246
BsgI GTGCAG 1 cut(s) 1509
Bsh1236I CGCG 2 cut(s) 91, 305
BshFI GGCC 3 cut(s) 38, 807, 812
BshNI GGYRCC 1 cut(s) 1580
BshVI ATCGAT 3 cut(s) 194, 592, 1468
BsiHKAI GWGCWC 3 cut(s) 582, 1747, 2010
BsiHKCI CYCGRG 2 cut(s) 215, 290
BsiSI CCGG 2 cut(s) 29, 1179
BslFI GGGAC 2 cut(s) 1437, 1768
BslI CCNNNNNNNGG 6 cut(s) 220, 261, 295, 1904, 2247, 2363
BsmAI GTCTC 5 cut(s) 442, 1620, 2073, 2197, 2332
BsmBI CGTCTC 1 cut(s) 2332
BsmFI GGGAC 2 cut(s) 1437, 1768
BsmI GAATGC 3 cut(s) 904, 1321, 1387
BsnI GGCC 3 cut(s) 38, 807, 812
Bso31I GGTCTC 1 cut(s) 442
BsoBI CYCGRG 2 cut(s) 215, 290
Bsp120I GGGCCC 1 cut(s) 36
Bsp1286I GDGCHC 4 cut(s) 40, 582, 1747, 2010
Bsp143I GATC 7 cut(s) 394, 593, 742, 1465, 1469, 1826, 2059
Bsp68I TCGCGA 1 cut(s) 91
BspANI GGCC 3 cut(s) 38, 807, 812
BspCNI CTCAG 7 cut(s) 190, 481, 1099, 1171, 1871, 1996, 2087
BspDI ATCGAT 3 cut(s) 194, 592, 1468
BspFNI CGCG 2 cut(s) 91, 305
BspLI GGNNCC 6 cut(s) 38, 85, 362, 711, 761, 1582
BspMAI CTGCAG 2 cut(s) 1405, 1762
BspMI ACCTGC 1 cut(s) 2161
BspPI GGATC 3 cut(s) 402, 588, 2054
BspQI GCTCTTC 1 cut(s) 2258
BspT107I GGYRCC 1 cut(s) 1580
BspTNI GGTCTC 1 cut(s) 442
BsrFI RCCGGY 1 cut(s) 28
BsrI ACTGG 7 cut(s) 364, 538, 808, 911, 1234, 1702, 2145
BssAI RCCGGY 1 cut(s) 28
BssECI CCNNGG 9 cut(s) 214, 231, 408, 432, 564, 601, 2151, 2232, 2269
BssMI GATC 7 cut(s) 394, 593, 742, 1465, 1469, 1826, 2059
BssNI GRCGYC 3 cut(s) 252, 2238, 2344
BssT1I CCWWGG 5 cut(s) 231, 408, 432, 601, 2232
Bst2UI CCWGG 6 cut(s) 566, 809, 1899, 1954, 2153, 2270
Bst4CI ACNGT 2 cut(s) 1708, 1942
Bst6I CTCTTC 1 cut(s) 2258
BstACI GRCGYC 3 cut(s) 252, 2238, 2344
BstAPI GCANNNNNTGC 1 cut(s) 1375
BstC8I GCNNGC 7 cut(s) 30, 211, 428, 464, 1079, 1167, 2168
BstEII GGTNACC 1 cut(s) 545
BstFNI CGCG 2 cut(s) 91, 305
BstHHI GCGC 1 cut(s) 1062
BstKTI GATC 7 cut(s) 397, 596, 745, 1468, 1472, 1829, 2062
BstMAI GTCTC 5 cut(s) 442, 1620, 2073, 2197, 2332
BstMBI GATC 7 cut(s) 394, 593, 742, 1465, 1469, 1826, 2059
BstMWI GCNNNNNNNGC 9 cut(s) 19, 514, 523, 1375, 1723, 1742, 2237, 2265, 2357
BstNI CCWGG 6 cut(s) 566, 809, 1899, 1954, 2153, 2270
BstNSI RCATGY 3 cut(s) 521, 1081, 2000
BstPAI GACNNNNGTC 1 cut(s) 543
BstPI GGTNACC 1 cut(s) 545
BstSCI CCNGG 6 cut(s) 564, 807, 1897, 1952, 2151, 2268
BstSFI CTRYAG 2 cut(s) 1401, 1758
BstSLI GKGCMC 2 cut(s) 40, 1747
BstUI CGCG 2 cut(s) 91, 305
BstV1I GCAGC 6 cut(s) 1174, 1348, 1372, 1387, 1415, 1525
BstV2I GAAGAC 1 cut(s) 354
BstX2I RGATCY 1 cut(s) 1826
BstXI CCANNNNNNTGG 5 cut(s) 238, 934, 1130, 2140, 2159
BstYI RGATCY 1 cut(s) 1826
Bsu15I ATCGAT 3 cut(s) 194, 592, 1468
Bsu36I CCTNAGG 1 cut(s) 468
BsuRI GGCC 3 cut(s) 38, 807, 812
BsuTUI ATCGAT 3 cut(s) 194, 592, 1468
BtrI CACGTC 1 cut(s) 1427
BtsIMutI CAGTG 5 cut(s) 531, 801, 1104, 1468, 1747
BtuMI TCGCGA 1 cut(s) 91
BveI ACCTGC 1 cut(s) 2161
Cac8I GCNNGC 7 cut(s) 30, 211, 428, 464, 1079, 1167, 2168
CfoI GCGC 1 cut(s) 1062
Cfr10I RCCGGY 1 cut(s) 28
Cfr13I GGNCC 5 cut(s) 36, 37, 286, 683, 709
ClaI ATCGAT 3 cut(s) 194, 592, 1468
CseI GACGC 5 cut(s) 260, 294, 311, 1348, 2246
Csp6I GTAC 3 cut(s) 1212, 1227, 2000
CviQI GTAC 3 cut(s) 1212, 1227, 2000
DpnI GATC 7 cut(s) 396, 595, 744, 1467, 1471, 1828, 2061
DpnII GATC 7 cut(s) 394, 593, 742, 1465, 1469, 1826, 2059
EaeI YGGCCR 1 cut(s) 805
Eam1104I CTCTTC 1 cut(s) 2258
EarI CTCTTC 1 cut(s) 2258
EciI GGCGGA 5 cut(s) 9, 905, 1533, 1972, 2097
Eco130I CCWWGG 5 cut(s) 231, 408, 432, 601, 2232
Eco147I AGGCCT 1 cut(s) 812
Eco24I GRGCYC 1 cut(s) 40
Eco31I GGTCTC 1 cut(s) 442
Eco47I GGWCC 3 cut(s) 286, 683, 709
Eco57I CTGAAG 4 cut(s) 660, 1436, 1464, 1815
Eco81I CCTNAGG 1 cut(s) 468
Eco88I CYCGRG 2 cut(s) 215, 290
Eco91I GGTNACC 1 cut(s) 545
EcoO109I RGGNCCY 3 cut(s) 36, 286, 709
EcoO65I GGTNACC 1 cut(s) 545
EcoRI GAATTC 3 cut(s) 140, 672, 1111
EcoRII CCWGG 6 cut(s) 564, 807, 1897, 1952, 2151, 2268
EcoT14I CCWWGG 5 cut(s) 231, 408, 432, 601, 2232
EcoT22I ATGCAT 3 cut(s) 735, 1079, 1083
EcoT38I GRGCYC 1 cut(s) 40
ErhI CCWWGG 5 cut(s) 231, 408, 432, 601, 2232
Esp3I CGTCTC 1 cut(s) 2332
FalI AAGNNNNNCTT 3 cut(s) 2087, 2119, 2365
FaqI GGGAC 2 cut(s) 1437, 1768
FauI CCCGC 1 cut(s) 1188
Fnu4HI GCNGC 8 cut(s) 1163, 1337, 1386, 1401, 1404, 1539, 2111, 2196
FriOI GRGCYC 1 cut(s) 40
Fsp4HI GCNGC 8 cut(s) 1163, 1337, 1386, 1401, 1404, 1539, 2111, 2196
FspBI CTAG 6 cut(s) 56, 423, 653, 1623, 1728, 2297
GlaI GCGC 1 cut(s) 1061
GluI GCNGC 8 cut(s) 1163, 1337, 1386, 1401, 1404, 1539, 2111, 2196
GsaI CCCAGC 1 cut(s) 2250
GsuI CTGGAG 3 cut(s) 928, 1719, 2162
HaeIII GGCC 3 cut(s) 38, 807, 812
HapII CCGG 2 cut(s) 29, 1179
HgaI GACGC 5 cut(s) 260, 294, 311, 1348, 2246
HhaI GCGC 1 cut(s) 1062
Hin1I GRCGYC 3 cut(s) 252, 2238, 2344
Hin6I GCGC 1 cut(s) 1060
HinP1I GCGC 1 cut(s) 1060
HincII GTYRAC 1 cut(s) 493
HindII GTYRAC 1 cut(s) 493
HindIII AAGCTT 3 cut(s) 665, 2089, 2349
HinfI GANTC 9 cut(s) 16, 93, 191, 912, 1019, 1490, 1682, 1991, 2156
HpaI GTTAAC 1 cut(s) 493
HpaII CCGG 2 cut(s) 29, 1179
HphI GGTGA 8 cut(s) 539, 548, 739, 1321, 1524, 1526, 1938, 2185
Hpy166II GTNNAC 6 cut(s) 277, 301, 313, 493, 1054, 1745
Hpy188III TCNNGA 8 cut(s) 90, 105, 217, 292, 470, 746, 1494, 2095
Hpy8I GTNNAC 6 cut(s) 277, 301, 313, 493, 1054, 1745
Hpy99I CGWCG 6 cut(s) 140, 208, 284, 310, 356, 2346
HpyCH4III ACNGT 2 cut(s) 1708, 1942
HpyCH4IV ACGT 3 cut(s) 766, 1426, 2344
HpyF10VI GCNNNNNNNGC 9 cut(s) 19, 514, 523, 1375, 1723, 1742, 2237, 2265, 2357
HpySE526I ACGT 3 cut(s) 766, 1426, 2344
Hsp92I GRCGYC 3 cut(s) 252, 2238, 2344
HspAI GCGC 1 cut(s) 1060
KroI GCCGGC 1 cut(s) 28
KroNI GCCGGC 1 cut(s) 30
KspAI GTTAAC 1 cut(s) 493
Kzo9I GATC 7 cut(s) 394, 593, 742, 1465, 1469, 1826, 2059
LguI GCTCTTC 1 cut(s) 2258
Lsp1109I GCAGC 6 cut(s) 1174, 1348, 1372, 1387, 1415, 1525
MaeI CTAG 6 cut(s) 56, 423, 653, 1623, 1728, 2297
MaeII ACGT 3 cut(s) 766, 1426, 2344
MaeIII GTNAC 6 cut(s) 536, 545, 969, 1636, 1693, 1936
MalI GATC 7 cut(s) 396, 595, 744, 1467, 1471, 1828, 2061
MboI GATC 7 cut(s) 394, 593, 742, 1465, 1469, 1826, 2059
MfeI CAATTG 1 cut(s) 41
MflI RGATCY 1 cut(s) 1826
MhlI GDGCHC 4 cut(s) 40, 582, 1747, 2010
MlsI TGGCCA 1 cut(s) 807
MluI ACGCGT 1 cut(s) 303
MluNI TGGCCA 1 cut(s) 807
MlyI GAGTC 2 cut(s) 10, 102
MmeI TCCRAC 3 cut(s) 787, 1585, 1794
Mox20I TGGCCA 1 cut(s) 807
Mph1103I ATGCAT 3 cut(s) 735, 1079, 1083
MreI CGCCGGCG 1 cut(s) 28
MroNI GCCGGC 1 cut(s) 28
MroXI GAANNNNTTC 1 cut(s) 1906
MscI TGGCCA 1 cut(s) 807
MseI TTAA 9 cut(s) 321, 480, 492, 986, 1152, 1298, 1505, 1509, 2389
MslI CAYNNNNRTG 5 cut(s) 867, 978, 1086, 1128, 1575
Msp20I TGGCCA 1 cut(s) 807
MspA1I CMGCKG 1 cut(s) 1538
MspI CCGG 2 cut(s) 29, 1179
MspR9I CCNGG 6 cut(s) 566, 809, 1899, 1954, 2153, 2270
MunI CAATTG 1 cut(s) 41
Mva1269I GAATGC 3 cut(s) 904, 1321, 1387
MvaI CCWGG 6 cut(s) 566, 809, 1899, 1954, 2153, 2270
MvnI CGCG 2 cut(s) 91, 305
MwoI GCNNNNNNNGC 9 cut(s) 19, 514, 523, 1375, 1723, 1742, 2237, 2265, 2357
NaeI GCCGGC 1 cut(s) 30
NdeII GATC 7 cut(s) 394, 593, 742, 1465, 1469, 1826, 2059
NgoMIV GCCGGC 1 cut(s) 28
NlaIV GGNNCC 6 cut(s) 38, 85, 362, 711, 761, 1582
NmeAIII GCCGAG 1 cut(s) 507
NmuCI GTSAC 2 cut(s) 536, 545
NruI TCGCGA 1 cut(s) 91
NsiI ATGCAT 3 cut(s) 735, 1079, 1083
NspI RCATGY 3 cut(s) 521, 1081, 2000
OliI CACNNNNGTG 1 cut(s) 867
PacI TTAATTAA 1 cut(s) 1509
PaeI GCATGC 1 cut(s) 1081
PaeR7I CTCGAG 1 cut(s) 290
PaqCI CACCTGC 1 cut(s) 2161
PceI AGGCCT 1 cut(s) 812
PciI ACATGT 1 cut(s) 1996
PciSI GCTCTTC 1 cut(s) 2258
PcsI WCGNNNNNNNCGW 2 cut(s) 200, 288
PctI GAATGC 3 cut(s) 904, 1321, 1387
PdiI GCCGGC 1 cut(s) 30
PdmI GAANNNNTTC 1 cut(s) 1906
PfeI GAWTC 7 cut(s) 191, 912, 1019, 1490, 1682, 1991, 2156
PflFI GACNNNGTC 3 cut(s) 284, 403, 2343
PkrI GCNGC 8 cut(s) 1164, 1338, 1387, 1402, 1405, 1540, 2112, 2197
PleI GAGTC 2 cut(s) 10, 101
PpsI GAGTC 2 cut(s) 10, 101
PpuMI RGGWCCY 2 cut(s) 286, 709
PscI ACATGT 1 cut(s) 1996
PshAI GACNNNNGTC 1 cut(s) 543
PshBI ATTAAT 1 cut(s) 1509
PsiI TTATAA 1 cut(s) 1976
Psp5II RGGWCCY 2 cut(s) 286, 709
Psp6I CCWGG 6 cut(s) 564, 807, 1897, 1952, 2151, 2268
PspEI GGTNACC 1 cut(s) 545
PspFI CCCAGC 1 cut(s) 2246
PspGI CCWGG 6 cut(s) 564, 807, 1897, 1952, 2151, 2268
PspN4I GGNNCC 6 cut(s) 38, 85, 362, 711, 761, 1582
PspOMI GGGCCC 1 cut(s) 36
PspPI GGNCC 5 cut(s) 36, 37, 286, 683, 709
PspPPI RGGWCCY 2 cut(s) 286, 709
PstI CTGCAG 2 cut(s) 1405, 1762
PsuI RGATCY 1 cut(s) 1826
PsyI GACNNNGTC 3 cut(s) 284, 403, 2343
PvuII CAGCTG 1 cut(s) 1538
RruI TCGCGA 1 cut(s) 91
RsaI GTAC 3 cut(s) 1213, 1228, 2001
RsaNI GTAC 3 cut(s) 1212, 1227, 2000
RseI CAYNNNNRTG 5 cut(s) 867, 978, 1086, 1128, 1575
SapI GCTCTTC 1 cut(s) 2258
SaqAI TTAA 9 cut(s) 321, 480, 492, 986, 1152, 1298, 1505, 1509, 2389
SatI GCNGC 8 cut(s) 1163, 1337, 1386, 1401, 1404, 1539, 2111, 2196
Sau3AI GATC 7 cut(s) 394, 593, 742, 1465, 1469, 1826, 2059
Sau96I GGNCC 5 cut(s) 36, 37, 286, 683, 709
ScaI AGTACT 1 cut(s) 1228
SchI GAGTC 2 cut(s) 10, 102
ScrFI CCNGG 6 cut(s) 566, 809, 1899, 1954, 2153, 2270
SduI GDGCHC 4 cut(s) 40, 582, 1747, 2010
SfcI CTRYAG 2 cut(s) 1401, 1758
Sfr274I CTCGAG 1 cut(s) 290
SgrAI CRCCGGYG 1 cut(s) 28
SinI GGWCC 3 cut(s) 286, 683, 709
SlaI CTCGAG 1 cut(s) 290
SmiMI CAYNNNNRTG 5 cut(s) 867, 978, 1086, 1128, 1575
SmlI CTYRAG 3 cut(s) 290, 814, 2086
SmoI CTYRAG 3 cut(s) 290, 814, 2086
SphI GCATGC 1 cut(s) 1081
SseBI AGGCCT 1 cut(s) 812
SspMI CTAG 6 cut(s) 56, 423, 653, 1623, 1728, 2297
StuI AGGCCT 1 cut(s) 812
StyD4I CCNGG 6 cut(s) 564, 807, 1897, 1952, 2151, 2268
StyI CCWWGG 5 cut(s) 231, 408, 432, 601, 2232
TaaI ACNGT 2 cut(s) 1708, 1942
TaiI ACGT 3 cut(s) 769, 1429, 2347
TaqI TCGA 9 cut(s) 135, 156, 189, 194, 291, 592, 745, 1260, 1468
TaqII GACCGA 1 cut(s) 671
TatI WGTACW 1 cut(s) 1226
TauI GCSGC 2 cut(s) 2113, 2198
TfiI GAWTC 7 cut(s) 191, 912, 1019, 1490, 1682, 1991, 2156
Tru1I TTAA 9 cut(s) 321, 480, 492, 986, 1152, 1298, 1505, 1509, 2389
Tru9I TTAA 9 cut(s) 321, 480, 492, 986, 1152, 1298, 1505, 1509, 2389
TscAI CASTG 5 cut(s) 538, 808, 1111, 1468, 1747
TseFI GTSAC 2 cut(s) 536, 545
TseI GCWGC 6 cut(s) 1162, 1336, 1385, 1400, 1403, 1538
Tsp45I GTSAC 2 cut(s) 536, 545
TspDTI ATGAA 9 cut(s) 434, 548, 665, 1236, 1314, 1503, 1607, 2205, 2276
TspGWI ACGGA 1 cut(s) 2375
TspRI CASTG 5 cut(s) 538, 808, 1111, 1468, 1747
Tth111I GACNNNGTC 3 cut(s) 284, 403, 2343
VneI GTGCAC 1 cut(s) 1743
VpaK11BI GGWCC 3 cut(s) 286, 683, 709
VspI ATTAAT 1 cut(s) 1509
XapI RAATTY 6 cut(s) 140, 624, 672, 1027, 1111, 1775
XceI RCATGY 3 cut(s) 521, 1081, 2000
XcmI CCANNNNNNNNNTGG 3 cut(s) 371, 770, 2159
XhoI CTCGAG 1 cut(s) 290
XmnI GAANNNNTTC 1 cut(s) 1906
XspI CTAG 6 cut(s) 56, 423, 653, 1623, 1728, 2297
ZraI GACGTC 1 cut(s) 2345
ZrmI AGTACT 1 cut(s) 1228
Zsp2I ATGCAT 3 cut(s) 735, 1079, 1083
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.