AT1G55610
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0002466
Physical Location & Seq
Reverse (-)
20779493 .. 20784017
4525 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G55610.1

Sequence Viewer

Length: 3501 bp
ATGAAGCAGAGATGGCTGTTAGTGTTGATACTCTGTTTCTTTACGACTTCTCTTGTGATGGGCATTCATGGAAAACACCTAATCAACGATGACTTCAACGAAACTGCTCTGTTATTGGCGTTCAAGCAAAACTCTGTAAAATCTGATCCTAATAACGTTCTTGGTAACTGGAAATACGAGTCGGGTCGTGGTTCATGCTCTTGGCGAGGGGTTTCTTGCTCTGACGATGGTCGAATCGTCGGATTAGATCTCCGAAACAGTGGACTCACCGGAACCCTAAACCTAGTTAACCTCACGGCGTTGCCTAATCTCCAGAATCTTTACTTGCAAGGAAATTACTTCTCCTCTGGAGGAGATTCGTCTGGTTCTGATTGTTATCTTCAAGTTCTGGATTTGTCTTCGAATTCTATTTCAGACTATTCAATGGTGGATTACGTTTTCTCAAAATGTTCGAATCTGGTTTCGGTGAATATCTCCAACAACAAGCTCGTCGGAAAATTAGGTTTTGCTCCGTCGTCTTTACAGAGCTTGACGACTGTTGATCTCTCTTACAACATCTTATCAGATAAGATTCCGGAGAGTTTTATTTCAGATTTTCCGGCGTCGTTGAAATATCTCGATCTAACTCACAACAACTTATCCGGCGACTTCTCCGATCTCAGTTTCGGTATCTGTGGGAATCTCACCTTCTTCAGTCTATCACAGAACAATCTCTCCGGTGATAAATTCCCAATCACTCTACCAAACTGCAAATTCCTCGAGACATTAAACATCTCTCGGAACAATCTCGCCGGAAAAATCCCTAACGGAGAGTATTGGGGAAGTTTCCAGAATCTGAAACAGCTCTCTCTAGCTCATAACCGTCTCTCCGGCGAAATCCCACCGGAGCTTTCTCTACTCTGCAAAACCCTAGTGATTCTTGATCTATCCGGAAACACTTTCTCCGGCGAGCTTCCTTCACAGTTCACCGCCTGCGTCTGGTTACAGAATCTTAACCTCGGAAACAACTACCTCTCCGGAGATTTCTTAAACACGGTCGTGAGTAAAATCACCGGAATCACTTATCTATACGTTGCTTACAACAACATCTCAGGCTCTGTTCCGATTTCTCTCACAAACTGTTCAAATCTTCGTGTTCTTGATCTAAGCTCAAATGGTTTCACCGGAAATGTACCGTCTGGTTTCTGCTCTCTGCAAAGCTCGCCGGTTCTTGAAAAGATTCTCATAGCTAACAATTACCTCTCAGGAACAGTTCCTATGGAGCTTGGTAAATGCAAGAGCTTGAAGACAATTGATCTTAGCTTCAATGAGCTTACTGGTCCGATTCCGAAAGAGATATGGATGTTGCCGAATCTGTCGGATTTGGTTATGTGGGCGAACAATCTCACTGGGACGATCCCGGAAGGTGTTTGTGTTAAAGGAGGAAATTTGGAAACTCTTATCCTCAACAACAATCTCTTAACCGGTTCAATCCCTGAGTCGATCTCGAGATGCACCAATATGATCTGGATCTCTCTTTCTAGTAATCGTCTCACCGGGAAAATCCCGAGCGGGATTGGTAATCTTTCCAAGTTAGCAATCTTGCAGCTAGGGAATAACTCTCTGTCCGGGAACGTTCCTCGCCAGCTTGGGAACTGCAAGAGTCTGATCTGGCTTGATCTGAACAGCAACAATCTAACCGGGGACCTCCCGGGTGAGCTAGCTAGCCAAGCCGGGTTAGTAATGCCTGGGAGCGTTTCAGGTAAACAGTTTGCGTTTGTGAGAAACGAAGGTGGAACAGACTGCAGAGGTGCAGGTGGGTTAGTAGAGTTTGAAGGCATTCGTGCTGAACGATTAGAGCGGCTACCAATGGTTCATTCGTGTCCCGCGACACGGATATACTCAGGCATGACAATGTACACATTCTCAGCAAATGGAAGCATGATCTATTTCGACATCTCGTATAATGCTGTTTCAGGTTTTATACCTCCTGGTTATGGTAACATGGGCTATCTCCAGGTCTTGAATTTGGGACATAACCGGATAACCGGAACCATCCCGGACAGTTTTGGAGGATTGAAAGCGATTGGTGTTCTCGATCTATCTCACAACAATCTTCAAGGGTACTTACCCGGGTCGCTGGGGTCGCTTTCTTTCCTCAGTGATCTTGATGTCTCTAACAACAACCTTACTGGTCCAATCCCATTTGGAGGTCAGCTTACAACGTTCCCTGTCTCGAGATACGCAAACAACTCAGGCCTCTGTGGTGTTCCTTTGCGTCCCTGCGGTTCAGCTCCTCGACGGCCCATTACCTCCCGTATCCATGCCAAGAAGCAAACTGTTGCAACCGCTGTGATCGCTGGAATTGCGTTTTCTTTCATGTGCTTTGTGATGCTAGTCATGGCGCTTTACAGGGTGAGGAAAGTTCAGAAGAAGGAACAGAAGAGGGAGAAATACATTGAGAGCCTTCCAACTTCCGGAAGCTGCAGCTGGAAGCTCTCTAGCGTTCCTGAACCGCTTAGCATCAACGTTGCTACATTCGAGAAACCGCTGAGAAAACTCACTTTCGCTCATCTTCTTGAAGCTACAAACGGGTTTAGCGCAGAGACTATGGTCGGGTCTGGTGGGTTTGGAGAAGTATACAAGGCCCAACTCAGAGACGGATCTGTTGTAGCGATCAAGAAGTTGATTCGAATCACGGGACAAGGCGACAGAGAGTTCATGGCTGAGATGGAAACAATCGGAAAAATCAAACACAGAAACCTTGTTCCACTTTTGGGATATTGCAAGGTTGGTGAAGAGAGGCTTCTTGTCTACGAATACATGAAATGGGGAAGCTTAGAAACCGTTCTTCACGAGAAATCATCGAAGAAAGGCGGAATATATCTGAATTGGGCCGCAAGGAAGAAGATCGCGATTGGAGCTGCAAGAGGGCTAGCGTTTTTGCACCATAGCTGCATTCCTCACATTATCCACAGAGACATGAAATCAAGCAATGTTCTTCTGGACGAAGATTTCGAAGCACGTGTTTCGGATTTCGGAATGGCGAGGCTGGTCAGCGCTCTAGACACGCATCTGAGCGTGAGCACGCTCGCGGGTACACCAGGTTACGTTCCACCGGAATATTACCAGAGTTTCCGGTGTACAGCTAAAGGGGATGTTTACAGCTACGGAGTTATACTTCTTGAGCTTCTGTCTGGTAAGAAACCAATTGATCCAGGGGAGTTTGGAGAAGATAATAACCTTGTAGGGTGGGCGAAACAGCTATACAGAGAGAAAAGAGGAGCTGAGATTCTTGATCCGGAGCTTGTAACCGATAAATCAGGCGATGTTGAGCTGTTTCATTATTTGAAGATCGCGTCTCAATGCTTGGATGATCGACCGTTTAAGCGGCCGACAATGATTCAACTGATGGCAATGTTCAAAGAGATGAAGGCTGATACAGAGGAAGACGAAAGTCTCGATGAGTTTTCGCTCAAGGAAACTCCGTTGGTCGAAGAATCGCGAGATAAGGAGCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase

Protein Analysis

1166

Amino Acids

127.42

Weight (kDa)

6.97

Isoelectric Point (pI)

31.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 34 - 74 6.1e-08 Leucine rich repeat N-terminal domain
Island PF20141 572 - 636 3.5e-32 Brassinosteroid receptor island domain
LRR_8 PF13855 665 - 723 2.4e-11 Leucine rich repeat
Pkinase PF00069 861 - 1132 3.6e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 862 - 1131 1.4e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1784
Acc36I ACCTGC 1 cut(s) 1784
AccBSI CCGCTC 2 cut(s) 1551, 1840
AccI GTMKAC 2 cut(s) 2619, 2793
AccII CGCG 5 cut(s) 1868, 2894, 3074, 3338, 3484
AccIII TCCGGA 5 cut(s) 574, 929, 1016, 2456, 3280
AclI AACGTT 4 cut(s) 156, 1614, 2204, 2508
AclWI GGATC 6 cut(s) 140, 1390, 1517, 2650, 3188, 3272
AcoI YGGCCR 1 cut(s) 3371
AcsI RAATTY 5 cut(s) 403, 725, 752, 1426, 2005
AcuI CTGAAG 1 cut(s) 676
AcvI CACGTG 1 cut(s) 3005
AcyI GRCGYC 1 cut(s) 602
AfaI GTAC 5 cut(s) 1173, 1898, 2105, 3079, 3124
AfeI AGCGCT 1 cut(s) 3040
AfiI CCNNNNNNNGG 6 cut(s) 978, 1872, 1976, 2189, 2456, 2756
AflIII ACRYGT 1 cut(s) 3004
AgeI ACCGGT 1 cut(s) 1463
AjnI CCWGG 5 cut(s) 1726, 1969, 1995, 3082, 3196
AjuI GAANNNNNNNTTGG 2 cut(s) 1840, 1872
AleI CACNNNNGTG 1 cut(s) 1037
AloI GAACNNNNNNTCC 2 cut(s) 698, 730
Alw21I GWGCWC 1 cut(s) 3068
AlwI GGATC 6 cut(s) 140, 1390, 1517, 2650, 3188, 3272
AlwNI CAGNNNCTG 2 cut(s) 835, 1097
Ama87I CYCGRG 6 cut(s) 758, 1486, 1546, 1690, 2111, 2215
Aor13HI TCCGGA 5 cut(s) 574, 929, 1016, 2456, 3280
Aor51HI AGCGCT 1 cut(s) 3040
AoxI GGCC 5 cut(s) 2236, 2282, 2625, 2874, 3371
ApeKI GCWGC 5 cut(s) 1585, 2463, 2466, 2903, 2934
ApoI RAATTY 5 cut(s) 403, 725, 752, 1426, 2005
ArsI GACNNNNNNTTYG 2 cut(s) 2978, 3010
AsiGI ACCGGT 1 cut(s) 1463
Asp700I GAANNNNTTC 3 cut(s) 1218, 1818, 2826
AspLEI GCGC 3 cut(s) 2386, 2582, 3041
AspS9I GGNCC 6 cut(s) 1319, 1684, 2174, 2283, 2626, 2874
AsuII TTCGAA 4 cut(s) 401, 452, 2671, 2997
AsuNHI GCTAGC 3 cut(s) 1699, 1703, 2914
AvaI CYCGRG 6 cut(s) 758, 1486, 1546, 1690, 2111, 2215
AvaII GGWCC 3 cut(s) 1319, 1684, 2174
BauI CACGAG 1 cut(s) 2834
BbrPI CACGTG 1 cut(s) 3005
BbsI GAAGAC 3 cut(s) 390, 1292, 3435
Bbv12I GWGCWC 1 cut(s) 3068
BbvI GCAGC 5 cut(s) 1597, 2450, 2478, 2890, 2921
BccI CCATC 6 cut(s) 6, 52, 221, 2042, 2704, 3385
BceAI ACGGC 2 cut(s) 312, 2297
BcgI CGANNNNNNTGC 4 cut(s) 739, 773, 2991, 3025
BciT130I CCWGG 5 cut(s) 1728, 1971, 1997, 3084, 3198
BciVI GTATCC 1 cut(s) 2309
BfmI CTRYAG 2 cut(s) 1783, 2464
BfoI RGCGCY 2 cut(s) 2387, 3042
BfuAI ACCTGC 1 cut(s) 1784
BfuI GTATCC 1 cut(s) 2309
BglII AGATCT 1 cut(s) 247
BisI GCNGC 8 cut(s) 1586, 1841, 2464, 2467, 2877, 2904, 2935, 3371
BlpI GCTNAGC 1 cut(s) 2498
BlsI GCNGC 8 cut(s) 1587, 1842, 2465, 2468, 2878, 2905, 2936, 3372
Bme18I GGWCC 3 cut(s) 1319, 1684, 2174
BmeT110I CYCGRG 6 cut(s) 758, 1486, 1546, 1690, 2111, 2215
BmgT120I GGNCC 6 cut(s) 1319, 1684, 2174, 2283, 2626, 2874
BmiI GGNNCC 4 cut(s) 274, 1685, 2032, 3495
BmrI ACTGGG 1 cut(s) 1398
BmsI GCATC 4 cut(s) 1481, 2361, 2511, 3061
BmtI GCTAGC 3 cut(s) 1703, 1707, 2918
BmuI ACTGGG 1 cut(s) 1398
BoxI GACNNNNGTC 3 cut(s) 228, 2591, 3435
BpiI GAAGAC 3 cut(s) 390, 1292, 3435
BplI GAGNNNNNCTC 2 cut(s) 1469, 1501
BpmI CTGGAG 3 cut(s) 296, 369, 1979
Bpu1102I GCTNAGC 1 cut(s) 2498
Bpu14I TTCGAA 4 cut(s) 401, 452, 2671, 2997
BpuEI CTTGAG 2 cut(s) 3185, 3440
BsaAI YACGTR 1 cut(s) 3005
BsaBI GATNNNNATC 3 cut(s) 375, 1508, 2672
BsaHI GRCGYC 1 cut(s) 602
BsaJI CCNNGG 6 cut(s) 997, 1680, 1690, 1727, 2111, 3197
BsaXI ACNNNNNCTCC 8 cut(s) 698, 728, 851, 881, 926, 956, 998, 1028
Bsc4I CCNNNNNNNGG 6 cut(s) 978, 1872, 1976, 2189, 2456, 2756
Bse118I RCCGGY 2 cut(s) 1204, 1463
Bse1I ACTGG 4 cut(s) 173, 1321, 1393, 2176
Bse3DI GCAATG 2 cut(s) 2980, 3402
Bse8I GATNNNNATC 3 cut(s) 375, 1508, 2672
BseAI TCCGGA 5 cut(s) 574, 929, 1016, 2456, 3280
BseBI CCWGG 5 cut(s) 1728, 1971, 1997, 3084, 3198
BseDI CCNNGG 6 cut(s) 997, 1680, 1690, 1727, 2111, 3197
BseGI GGATG 4 cut(s) 1347, 2034, 3142, 3358
BseJI GATNNNNATC 3 cut(s) 375, 1508, 2672
BseLI CCNNNNNNNGG 6 cut(s) 978, 1872, 1976, 2189, 2456, 2756
BseMI GCAATG 2 cut(s) 2980, 3402
BseNI ACTGG 4 cut(s) 173, 1321, 1393, 2176
BseRI GAGGAG 4 cut(s) 334, 366, 2265, 3276
BseX3I CGGCCG 1 cut(s) 3371
BseXI GCAGC 5 cut(s) 1597, 2450, 2478, 2890, 2921
BseYI CCCAGC 1 cut(s) 2119
BsgI GTGCAG 1 cut(s) 1812
Bsh1236I CGCG 5 cut(s) 1868, 2894, 3074, 3338, 3484
Bsh1285I CGRYCG 3 cut(s) 1038, 3362, 3374
BshFI GGCC 5 cut(s) 2238, 2284, 2627, 2876, 3373
BshTI ACCGGT 1 cut(s) 1463
BsiEI CGRYCG 3 cut(s) 1038, 3362, 3374
BsiHKAI GWGCWC 1 cut(s) 3068
BsiHKCI CYCGRG 6 cut(s) 758, 1486, 1546, 1690, 2111, 2215
BslFI GGGAC 6 cut(s) 1405, 1697, 1848, 2025, 2244, 2694
BslI CCNNNNNNNGG 6 cut(s) 978, 1872, 1976, 2189, 2456, 2756
BsmBI CGTCTC 4 cut(s) 869, 1535, 2631, 3345
BsmFI GGGAC 6 cut(s) 1405, 1697, 1848, 2025, 2244, 2694
BsmI GAATGC 3 cut(s) 63, 1818, 2937
BsnI GGCC 5 cut(s) 2238, 2284, 2627, 2876, 3373
BsoBI CYCGRG 6 cut(s) 758, 1486, 1546, 1690, 2111, 2215
Bsp119I TTCGAA 4 cut(s) 401, 452, 2671, 2997
Bsp1286I GDGCHC 1 cut(s) 3068
Bsp13I TCCGGA 5 cut(s) 574, 929, 1016, 2456, 3280
Bsp1407I TGTACA 2 cut(s) 1896, 3122
Bsp1720I GCTNAGC 1 cut(s) 2498
Bsp68I TCGCGA 2 cut(s) 2894, 3484
BspANI GGCC 5 cut(s) 2238, 2284, 2627, 2876, 3373
BspEI TCCGGA 5 cut(s) 574, 929, 1016, 2456, 3280
BspFNI CGCG 5 cut(s) 1868, 2894, 3074, 3338, 3484
BspLI GGNNCC 4 cut(s) 274, 1685, 2032, 3495
BspMAI CTGCAG 2 cut(s) 1787, 2468
BspMI ACCTGC 1 cut(s) 1784
BspOI GCTAGC 3 cut(s) 1703, 1707, 2918
BspPI GGATC 6 cut(s) 140, 1390, 1517, 2650, 3188, 3272
BspT104I TTCGAA 4 cut(s) 401, 452, 2671, 2997
BsrBI CCGCTC 2 cut(s) 1551, 1840
BsrDI GCAATG 2 cut(s) 2980, 3402
BsrFI RCCGGY 2 cut(s) 1204, 1463
BsrGI TGTACA 2 cut(s) 1896, 3122
BsrI ACTGG 4 cut(s) 173, 1321, 1393, 2176
BssAI RCCGGY 2 cut(s) 1204, 1463
BssECI CCNNGG 6 cut(s) 997, 1680, 1690, 1727, 2111, 3197
BssNAI GTATAC 1 cut(s) 2620
BssNI GRCGYC 1 cut(s) 602
BssSI CACGAG 1 cut(s) 2834
Bst1107I GTATAC 1 cut(s) 2620
Bst2BI CACGAG 1 cut(s) 2834
Bst2UI CCWGG 5 cut(s) 1728, 1971, 1997, 3084, 3198
Bst6I CTCTTC 2 cut(s) 2417, 2772
BstACI GRCGYC 1 cut(s) 602
BstAUI TGTACA 2 cut(s) 1896, 3122
BstBAI YACGTR 1 cut(s) 3005
BstBI TTCGAA 4 cut(s) 401, 452, 2671, 2997
BstC8I GCNNGC 9 cut(s) 950, 973, 1202, 1625, 1701, 1705, 2916, 3068, 3072
BstF5I GGATG 4 cut(s) 1347, 2034, 3142, 3358
BstFNI CGCG 5 cut(s) 1868, 2894, 3074, 3338, 3484
BstH2I RGCGCY 2 cut(s) 2387, 3042
BstHHI GCGC 3 cut(s) 2386, 2582, 3041
BstMCI CGRYCG 3 cut(s) 1038, 3362, 3374
BstMWI GCNNNNNNNGC 7 cut(s) 13, 1201, 1709, 2125, 2336, 2345, 2900
BstNI CCWGG 5 cut(s) 1728, 1971, 1997, 3084, 3198
BstPAI GACNNNNGTC 3 cut(s) 228, 2591, 3435
BstSFI CTRYAG 2 cut(s) 1783, 2464
BstUI CGCG 5 cut(s) 1868, 2894, 3074, 3338, 3484
BstV1I GCAGC 5 cut(s) 1597, 2450, 2478, 2890, 2921
BstV2I GAAGAC 3 cut(s) 390, 1292, 3435
BstX2I RGATCY 3 cut(s) 247, 1509, 2642
BstYI RGATCY 3 cut(s) 247, 1509, 2642
BstZ17I GTATAC 1 cut(s) 2620
BstZI CGGCCG 1 cut(s) 3371
BsuI GTATCC 1 cut(s) 2309
BsuRI GGCC 5 cut(s) 2238, 2284, 2627, 2876, 3373
BtgZI GCGATG 1 cut(s) 3321
BtsCI GGATG 4 cut(s) 1347, 2034, 3142, 3358
BtsIMutI CAGTG 3 cut(s) 265, 1386, 2146
BtuMI TCGCGA 2 cut(s) 2894, 3484
BveI ACCTGC 1 cut(s) 1784
Cac8I GCNNGC 9 cut(s) 950, 973, 1202, 1625, 1701, 1705, 2916, 3068, 3072
CaiI CAGNNNCTG 2 cut(s) 835, 1097
CfoI GCGC 3 cut(s) 2386, 2582, 3041
Cfr10I RCCGGY 2 cut(s) 1204, 1463
Cfr13I GGNCC 6 cut(s) 1319, 1684, 2174, 2283, 2626, 2874
Cfr9I CCCGGG 2 cut(s) 1690, 2111
CseI GACGC 4 cut(s) 591, 964, 2246, 3327
CsiI ACCWGGT 1 cut(s) 3082
Csp6I GTAC 5 cut(s) 1172, 1897, 2104, 3078, 3123
CspAI ACCGGT 1 cut(s) 1463
CviQI GTAC 5 cut(s) 1172, 1897, 2104, 3078, 3123
EaeI YGGCCR 1 cut(s) 3371
EagI CGGCCG 1 cut(s) 3371
Eam1104I CTCTTC 2 cut(s) 2417, 2772
EarI CTCTTC 2 cut(s) 2417, 2772
EciI GGCGGA 1 cut(s) 2871
EclXI CGGCCG 1 cut(s) 3371
Eco147I AGGCCT 1 cut(s) 2238
Eco47I GGWCC 3 cut(s) 1319, 1684, 2174
Eco47III AGCGCT 1 cut(s) 3040
Eco52I CGGCCG 1 cut(s) 3371
Eco57I CTGAAG 1 cut(s) 676
Eco72I CACGTG 1 cut(s) 3005
Eco88I CYCGRG 6 cut(s) 758, 1486, 1546, 1690, 2111, 2215
EcoO109I RGGNCCY 1 cut(s) 1684
EcoRI GAATTC 1 cut(s) 403
EcoRII CCWGG 5 cut(s) 1726, 1969, 1995, 3082, 3196
Esp3I CGTCTC 4 cut(s) 869, 1535, 2631, 3345
FalI AAGNNNNNCTT 2 cut(s) 2769, 2801
FaqI GGGAC 6 cut(s) 1405, 1697, 1848, 2025, 2244, 2694
FauI CCCGC 3 cut(s) 1544, 1873, 3067
FblI GTMKAC 2 cut(s) 2619, 2793
Fnu4HI GCNGC 8 cut(s) 1586, 1841, 2464, 2467, 2877, 2904, 2935, 3371
FokI GGATG 4 cut(s) 1354, 2021, 3149, 3365
Fsp4HI GCNGC 8 cut(s) 1586, 1841, 2464, 2467, 2877, 2904, 2935, 3371
GlaI GCGC 3 cut(s) 2385, 2581, 3040
GluI GCNGC 8 cut(s) 1586, 1841, 2464, 2467, 2877, 2904, 2935, 3371
GsaI CCCAGC 1 cut(s) 2123
GsuI CTGGAG 3 cut(s) 296, 369, 1979
HaeII RGCGCY 2 cut(s) 2387, 3042
HaeIII GGCC 5 cut(s) 2238, 2284, 2627, 2876, 3373
HgaI GACGC 4 cut(s) 591, 964, 2246, 3327
HhaI GCGC 3 cut(s) 2386, 2582, 3041
Hin1I GRCGYC 1 cut(s) 602
Hin6I GCGC 3 cut(s) 2384, 2580, 3039
HinP1I GCGC 3 cut(s) 2384, 2580, 3039
HincII GTYRAC 1 cut(s) 289
HindII GTYRAC 1 cut(s) 289
HindIII AAGCTT 1 cut(s) 2815
HpaI GTTAAC 1 cut(s) 289
Hpy99I CGWCG 5 cut(s) 242, 494, 517, 607, 2283
HpyAV CCTTC 8 cut(s) 697, 966, 1397, 1763, 1808, 2407, 2456, 3406
HpyCH4IV ACGT 8 cut(s) 156, 435, 1071, 1614, 2204, 2508, 3004, 3090
HpyF10VI GCNNNNNNNGC 7 cut(s) 13, 1201, 1709, 2125, 2336, 2345, 2900
HpySE526I ACGT 8 cut(s) 156, 435, 1071, 1614, 2204, 2508, 3004, 3090
Hsp92I GRCGYC 1 cut(s) 602
HspAI GCGC 3 cut(s) 2384, 2580, 3039
Kpn2I TCCGGA 5 cut(s) 574, 929, 1016, 2456, 3280
KspAI GTTAAC 1 cut(s) 289
LmnI GCTCC 9 cut(s) 514, 886, 1261, 1731, 2278, 2900, 3263, 3283, 3493
Lsp1109I GCAGC 5 cut(s) 1597, 2450, 2478, 2890, 2921
LweI GCATC 4 cut(s) 1481, 2361, 2511, 3061
MabI ACCWGGT 1 cut(s) 3082
MaeII ACGT 8 cut(s) 156, 435, 1071, 1614, 2204, 2508, 3004, 3090
MaeIII GTNAC 5 cut(s) 164, 981, 1979, 3086, 3289
MbiI CCGCTC 2 cut(s) 1551, 1840
MfeI CAATTG 2 cut(s) 1290, 3189
MflI RGATCY 3 cut(s) 247, 1509, 2642
MhlI GDGCHC 1 cut(s) 3068
MlyI GAGTC 4 cut(s) 188, 258, 1487, 1651
MmeI TCCRAC 5 cut(s) 220, 472, 501, 1338, 2474
MroI TCCGGA 5 cut(s) 574, 929, 1016, 2456, 3280
MroXI GAANNNNTTC 3 cut(s) 1218, 1818, 2826
MseI TTAA 8 cut(s) 288, 767, 993, 1028, 1416, 1460, 3366, 3499
MslI CAYNNNNRTG 3 cut(s) 1037, 1499, 1892
MspA1I CMGCKG 3 cut(s) 2330, 2469, 2530
MunI CAATTG 2 cut(s) 1290, 3189
Mva1269I GAATGC 3 cut(s) 63, 1818, 2937
MvaI CCWGG 5 cut(s) 1728, 1971, 1997, 3084, 3198
MvnI CGCG 5 cut(s) 1868, 2894, 3074, 3338, 3484
MwoI GCNNNNNNNGC 7 cut(s) 13, 1201, 1709, 2125, 2336, 2345, 2900
NheI GCTAGC 3 cut(s) 1699, 1703, 2914
NlaIV GGNNCC 4 cut(s) 274, 1685, 2032, 3495
NruI TCGCGA 2 cut(s) 2894, 3484
NspV TTCGAA 4 cut(s) 401, 452, 2671, 2997
OliI CACNNNNGTG 1 cut(s) 1037
PaeR7I CTCGAG 3 cut(s) 758, 1486, 2215
PaqCI CACCTGC 1 cut(s) 1784
PceI AGGCCT 1 cut(s) 2238
PcsI WCGNNNNNNNCGW 4 cut(s) 1828, 1865, 2994, 3438
PctI GAATGC 3 cut(s) 63, 1818, 2937
PdmI GAANNNNTTC 3 cut(s) 1218, 1818, 2826
PfoI TCCNGGA 3 cut(s) 1398, 1607, 2037
PinAI ACCGGT 1 cut(s) 1463
PkrI GCNGC 8 cut(s) 1587, 1842, 2465, 2468, 2878, 2905, 2936, 3372
PleI GAGTC 4 cut(s) 187, 258, 1486, 1650
PmaCI CACGTG 1 cut(s) 3005
PmlI CACGTG 1 cut(s) 3005
PpsI GAGTC 4 cut(s) 187, 258, 1486, 1650
Ppu21I YACGTR 1 cut(s) 3005
PpuMI RGGWCCY 1 cut(s) 1684
PshAI GACNNNNGTC 3 cut(s) 228, 2591, 3435
Psp1406I AACGTT 4 cut(s) 156, 1614, 2204, 2508
Psp5II RGGWCCY 1 cut(s) 1684
Psp6I CCWGG 5 cut(s) 1726, 1969, 1995, 3082, 3196
PspCI CACGTG 1 cut(s) 3005
PspFI CCCAGC 1 cut(s) 2119
PspGI CCWGG 5 cut(s) 1726, 1969, 1995, 3082, 3196
PspN4I GGNNCC 4 cut(s) 274, 1685, 2032, 3495
PspPI GGNCC 6 cut(s) 1319, 1684, 2174, 2283, 2626, 2874
PspPPI RGGWCCY 1 cut(s) 1684
PstI CTGCAG 2 cut(s) 1787, 2468
PstNI CAGNNNCTG 2 cut(s) 835, 1097
PsuI RGATCY 3 cut(s) 247, 1509, 2642
PvuII CAGCTG 1 cut(s) 2469
RruI TCGCGA 2 cut(s) 2894, 3484
RsaI GTAC 5 cut(s) 1173, 1898, 2105, 3079, 3124
RsaNI GTAC 5 cut(s) 1172, 1897, 2104, 3078, 3123
RseI CAYNNNNRTG 3 cut(s) 1037, 1499, 1892
SaqAI TTAA 8 cut(s) 288, 767, 993, 1028, 1416, 1460, 3366, 3499
SatI GCNGC 8 cut(s) 1586, 1841, 2464, 2467, 2877, 2904, 2935, 3371
Sau96I GGNCC 6 cut(s) 1319, 1684, 2174, 2283, 2626, 2874
SchI GAGTC 4 cut(s) 188, 258, 1487, 1651
SduI GDGCHC 1 cut(s) 3068
SexAI ACCWGGT 1 cut(s) 3082
SfaNI GCATC 4 cut(s) 1481, 2361, 2511, 3061
SfcI CTRYAG 2 cut(s) 1783, 2464
Sfr274I CTCGAG 3 cut(s) 758, 1486, 2215
SfuI TTCGAA 4 cut(s) 401, 452, 2671, 2997
SinI GGWCC 3 cut(s) 1319, 1684, 2174
SlaI CTCGAG 3 cut(s) 758, 1486, 2215
SmaI CCCGGG 2 cut(s) 1692, 2113
SmiMI CAYNNNNRTG 3 cut(s) 1037, 1499, 1892
SmlI CTYRAG 5 cut(s) 758, 1486, 2215, 3164, 3455
SmoI CTYRAG 5 cut(s) 758, 1486, 2215, 3164, 3455
SseBI AGGCCT 1 cut(s) 2238
SspI AATATT 1 cut(s) 3104
StuI AGGCCT 1 cut(s) 2238
TaiI ACGT 8 cut(s) 159, 438, 1074, 1617, 2207, 2511, 3007, 3093
TatI WGTACW 2 cut(s) 1896, 3122
TauI GCSGC 3 cut(s) 1843, 2879, 3373
Tru1I TTAA 8 cut(s) 288, 767, 993, 1028, 1416, 1460, 3366, 3499
Tru9I TTAA 8 cut(s) 288, 767, 993, 1028, 1416, 1460, 3366, 3499
TscAI CASTG 3 cut(s) 265, 1393, 2146
TseI GCWGC 5 cut(s) 1585, 2463, 2466, 2903, 2934
TspGWI ACGGA 6 cut(s) 501, 822, 1888, 2655, 3165, 3456
TspMI CCCGGG 2 cut(s) 1690, 2111
TspRI CASTG 3 cut(s) 265, 1393, 2146
VpaK11BI GGWCC 3 cut(s) 1319, 1684, 2174
XapI RAATTY 5 cut(s) 403, 725, 752, 1426, 2005
XbaI TCTAGA 1 cut(s) 3043
XhoI CTCGAG 3 cut(s) 758, 1486, 2215
XmaI CCCGGG 2 cut(s) 1690, 2111
XmiI GTMKAC 2 cut(s) 2619, 2793
XmnI GAANNNNTTC 3 cut(s) 1218, 1818, 2826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.