AT3G13380
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0002466
Physical Location & Seq
Forward (+)
4346330 .. 4350939
4610 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G13380.1

Sequence Viewer

Length: 3495 bp
ATGAAACAACAATGGCAGTTCTTGATCCTCTGTTTGCTCGTCTTGTTTCTAACGGTGGACTCTCGTGGCAGACGGCTACTCAGCGACGACGTTAACGACACAGCTCTGCTAACGGCGTTTAAGCAAACCTCTATCAAGTCGGATCCTACCAACTTTTTAGGTAACTGGAGATACGGGTCGGGTCGTGACCCATGTACTTGGCGAGGCGTCTCTTGTTCTAGCGATGGTAGAGTCATTGGACTTGATCTACGAAACGGTGGTCTTACCGGAACCCTAAATCTCAATAATCTCACGGCGTTGTCTAATCTCCGGAGTCTTTATTTGCAAGGAAACAACTTCTCCTCCGGAGATTCTTCTTCTTCTTCAGGATGTTCTCTCGAGGTTCTGGATTTATCTTCAAACTCGCTTACGGACTCTTCAATAGTGGATTACGTTTTCTCCACCTGTTTAAATCTGGTTTCTGTCAATTTCTCGCACAACAAGCTCGCCGGGAAATTGAAGTCTTCTCCTTCGGCGAGTAACAAGAGAATCACAACCGTTGATCTCTCGAACAATCGCTTCTCCGATGAGATTCCGGAGACTTTCATCGCCGATTTTCCGAATTCTCTGAAACACCTCGACTTATCCGGCAACAATGTCACCGGCGACTTCTCTCGTCTCAGCTTTGGTCTCTGTGAGAACCTCACCGTATTCAGCTTATCACAGAACAGCATCTCCGGCGACAGATTTCCGGTTAGTCTCTCAAATTGTAAGCTCCTCGAAACGTTAAACCTCTCTCGGAACAGTCTCATCGGAAAAATCCCCGGAGATGACTATTGGGGAAATTTTCAGAACCTGAGGCAGCTCTCTCTTGCACACAACCTTTACTCCGGTGAGATTCCACCGGAGCTTTCTCTGCTCTGTCGAACTCTAGAGGTTCTCGATCTCTCCGGCAACAGTCTCACCGGTCAGCTTCCGCAATCATTCACCTCTTGTGGCTCATTACAAAGCCTAAATCTTGGAAACAACAAGCTCTCCGGTGATTTCTTAAGCACCGTCGTGAGTAAACTCTCTAGAATCACTAATCTTTACTTACCATTCAACAACATCTCAGGCTCTGTTCCGATTTCGCTCACCAACTGTAGTAATCTGCGAGTTCTTGATCTGAGCTCAAACGAGTTCACTGGAGAAGTACCATCTGGTTTCTGCTCTCTTCAAAGCTCTTCGGTTTTGGAAAAGTTGCTTATTGCCAACAATTACCTCTCAGGAACTGTCCCTGTAGAGCTTGGTAAATGTAAGAGCTTGAAGACTATAGATCTTAGCTTCAATGCTCTCACTGGTCTGATTCCTAAGGAGATATGGACATTGCCTAAGCTCTCCGACTTAGTTATGTGGGCGAACAATCTCACTGGTGGAATCCCGGAGAGCATTTGTGTTGATGGAGGAAACTTGGAAACGTTAATCTTAAACAACAATCTCTTAACCGGTTCTCTTCCAGAATCAATCTCCAAATGCACCAACATGCTTTGGATCTCCCTTTCTAGTAACCTGCTTACCGGTGAAATCCCTGTAGGAATCGGAAAGCTTGAGAAGTTAGCGATTCTGCAACTCGGGAACAATTCTTTAACTGGGAACATTCCAAGTGAGCTTGGAAACTGCAAGAACCTTATCTGGCTTGATCTTAACAGCAATAATCTAACTGGGAATCTCCCAGGTGAACTTGCAAGTCAGGCCGGACTGGTAATGCCCGGAAGCGTCTCTGGTAAACAGTTTGCGTTTGTGAGGAATGAAGGTGGGACGGATTGCAGAGGTGCAGGGGGTTTGGTTGAGTTTGAAGGAATTCGTGCTGAGCGGTTAGAGCATTTTCCAATGGTTCATTCATGTCCCAAGACTCGGATATACTCAGGCATGACCATGTACATGTTCTCCAGTAACGGGAGCATGATCTACTTGGACCTTTCCTACAATGCGGTTTCAGGTTCTATTCCTTTGGGTTATGGTGCAATGGGATATCTTCAGGTCTTGAATTTGGGACATAACTTGTTAACTGGAACCATACCGGATAGCTTCGGAGGATTGAAAGCAATTGGAGTTCTTGATCTATCTCACAATGATCTCCAAGGATTCTTACCTGGATCACTAGGAGGACTCTCTTTTCTAAGCGACTTAGACGTCTCTAACAACAATCTAACCGGACCAATCCCATTCGGAGGCCAACTTACGACGTTCCCACTCACAAGATACGCCAACAACTCTGGCCTCTGCGGGGTTCCTCTACCACCTTGTAGCTCTGGTTCCCGGCCCACGAGATCTCATGCTCACCCTAAAAAACAGAGCATTGCGACTGGGATGAGTGCGGGGATTGTGTTTTCTTTCATGTGTATTGTGATGCTTATTATGGCGCTTTATAGAGCAAGGAAGGTTCAGAAGAAGGAAAAACAGAGAGAGAAGTACATTGAGAGCCTTCCGACATCTGGTAGCAGCAGCTGGAAGCTCTCTAGTGTTCATGAACCGTTGAGCATCAACGTTGCAACATTTGAGAAGCCGCTGCGAAAACTTACTTTTGCACACCTTTTAGAAGCCACAAACGGGTTTAGTGCTGATAGTATGATCGGATCAGGTGGATTTGGAGATGTCTACAAGGCTAAACTGGCTGATGGATCTGTTGTAGCGATCAAGAAGTTGATTCAAGTCACGGGACAAGGTGATAGAGAGTTCATGGCAGAGATGGAAACGATTGGTAAAATCAAACATCGAAATTTGGTACCTCTTCTTGGATATTGCAAGATTGGTGAAGAGAGACTTCTTGTCTATGAGTACATGAAATACGGAAGCTTAGAGACAGTTCTGCACGAAAAGACCAAGAAGGGTGGAATCTTTCTTGATTGGTCAGCGAGAAAGAAGATTGCAATAGGAGCTGCGCGTGGGCTAGCTTTTCTGCACCATAGCTGCATTCCTCATATTATCCACAGGGATATGAAATCAAGCAACGTTCTTCTAGACCAAGATTTTGTTGCCCGTGTCTCAGATTTTGGTATGGCAAGGCTGGTGAGCGCTCTGGACACACACTTGAGCGTGAGCACGCTCGCAGGTACTCCCGGGTATGTCCCACCAGAGTATTACCAGAGTTTCCGATGTACAGCCAAAGGAGATGTGTATAGCTACGGAGTTATACTTCTGGAGCTCCTCTCAGGCAAGAAACCGATCGATCCAGAGGAGTTTGGTGAAGACAACAACCTTGTGGGATGGGCTAAACAGCTCTACAGAGAGAAGAGAGGAGCTGAGATACTTGACCCAGAGTTAGTAACAGACAAATCTGGCGATGTTGAGCTACTTCATTACTTGAAGATTGCGTCTCAATGTTTGGACGATCGGCCATTCAAAAGACCAACTATGATTCAAGTCATGACGATGTTCAAAGAGCTCGTTCAGGTTGATACAGAGAACGACAGTCTTGATGAGTTTTTGCTAAAGGAAACGCCGTTGGTCGAAGAATCACGAGATAAGGAGCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase

Protein Analysis

1164

Amino Acids

126.66

Weight (kDa)

6.3

Isoelectric Point (pI)

31.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 32 - 73 4.2e-08 Leucine rich repeat N-terminal domain
LRR_8 PF13855 278 - 338 2.2e-07 Leucine rich repeat
LRR_8 PF13855 404 - 462 8.6e-07 Leucine rich repeat
Island PF20141 572 - 636 2.4e-31 Brassinosteroid receptor island domain
LRR_8 PF13855 665 - 723 1.2e-10 Leucine rich repeat
Pkinase PF00069 860 - 1130 2.1e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 861 - 1129 5.6e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2150
AatII GACGTC 1 cut(s) 2154
Acc36I ACCTGC 2 cut(s) 1536, 3059
Acc65I GGTACC 1 cut(s) 2743
AccB1I GGYRCC 1 cut(s) 2743
AccBSI CCGCTC 1 cut(s) 1831
AccI GTMKAC 1 cut(s) 2616
AccII CGCG 1 cut(s) 2902
AccIII TCCGGA 3 cut(s) 309, 344, 574
AciI CCGC 6 cut(s) 956, 1831, 1949, 2244, 2336, 2525
AclI AACGTT 4 cut(s) 764, 1436, 2505, 2970
AclWI GGATC 8 cut(s) 19, 137, 150, 1517, 2122, 2602, 2647, 3182
AcoI YGGCCR 1 cut(s) 3353
AcsI RAATTY 5 cut(s) 601, 823, 1818, 2005, 2737
AcuI CTGAAG 2 cut(s) 348, 1979
AcyI GRCGYC 2 cut(s) 207, 2151
AfaI GTAC 8 cut(s) 196, 1173, 1898, 2432, 2745, 2798, 3073, 3118
AfeI AGCGCT 1 cut(s) 3034
AfiI CCNNNNNNNGG 7 cut(s) 1872, 1914, 2189, 2245, 2453, 2568, 2753
AflII CTTAAG 1 cut(s) 1027
AflIII ACRYGT 1 cut(s) 1899
AgeI ACCGGT 3 cut(s) 944, 1463, 1535
AhdI GACNNNNNGTC 1 cut(s) 2786
AjnI CCWGG 2 cut(s) 1690, 2110
AjuI GAANNNNNNNTTGG 2 cut(s) 1840, 1872
AleI CACNNNNGTG 1 cut(s) 1037
AloI GAACNNNNNNTCC 2 cut(s) 698, 730
Alw21I GWGCWC 4 cut(s) 1151, 3062, 3165, 3405
AlwI GGATC 8 cut(s) 19, 137, 150, 1517, 2122, 2602, 2647, 3182
AlwNI CAGNNNCTG 4 cut(s) 835, 1097, 1250, 2466
Ama87I CYCGRG 3 cut(s) 377, 1589, 3077
Aor13HI TCCGGA 3 cut(s) 309, 344, 574
Aor51HI AGCGCT 1 cut(s) 3034
AoxI GGCC 5 cut(s) 1710, 2191, 2236, 2279, 3353
ApeKI GCWGC 6 cut(s) 841, 2460, 2463, 2527, 2897, 2928
ApoI RAATTY 5 cut(s) 601, 823, 1818, 2005, 2737
ArsI GACNNNNNNTTYG 4 cut(s) 244, 276, 2972, 3004
AsiGI ACCGGT 3 cut(s) 944, 1463, 1535
Asp700I GAANNNNTTC 1 cut(s) 1818
Asp718I GGTACC 1 cut(s) 2743
AspLEI GCGC 3 cut(s) 2383, 2902, 3035
AspS9I GGNCC 3 cut(s) 1933, 2174, 2280
AsuC2I CCSGG 7 cut(s) 490, 804, 1400, 1728, 2278, 3078, 3079
AsuNHI GCTAGC 1 cut(s) 2908
AvaI CYCGRG 3 cut(s) 377, 1589, 3077
AvaII GGWCC 2 cut(s) 1933, 2174
AxyI CCTNAGG 2 cut(s) 836, 1329
BamHI GGATCC 1 cut(s) 142
BanI GGYRCC 1 cut(s) 2743
BanII GRGCYC 3 cut(s) 1151, 3165, 3405
BauI CACGAG 3 cut(s) 63, 2284, 3477
BbsI GAAGAC 3 cut(s) 495, 1292, 3213
Bbv12I GWGCWC 4 cut(s) 1151, 3062, 3165, 3405
BbvI GCAGC 6 cut(s) 853, 2472, 2475, 2514, 2884, 2915
BccI CCATC 6 cut(s) 218, 1183, 1412, 2630, 2701, 3219
BceAI ACGGC 4 cut(s) 89, 129, 309, 3445
BciT130I CCWGG 2 cut(s) 1692, 2112
BcnI CCSGG 7 cut(s) 490, 804, 1400, 1728, 2278, 3078, 3079
BfaI CTAG 8 cut(s) 219, 911, 1053, 1521, 2120, 2478, 2909, 2978
BfmI CTRYAG 5 cut(s) 1120, 1257, 1290, 1548, 3241
BfoI RGCGCY 2 cut(s) 2384, 3036
BfrI CTTAAG 1 cut(s) 1027
BfuAI ACCTGC 2 cut(s) 1536, 3059
BglII AGATCT 2 cut(s) 1294, 2288
BisI GCNGC 7 cut(s) 842, 2461, 2464, 2525, 2528, 2898, 2929
BlpI GCTNAGC 1 cut(s) 1827
BlsI GCNGC 7 cut(s) 843, 2462, 2465, 2526, 2529, 2899, 2930
Bme1390I CCNGG 9 cut(s) 490, 804, 1400, 1692, 1728, 2112, 2278, 3078, 3079
Bme18I GGWCC 2 cut(s) 1933, 2174
BmeRI GACNNNNNGTC 1 cut(s) 2786
BmeT110I CYCGRG 3 cut(s) 377, 1589, 3077
BmgT120I GGNCC 3 cut(s) 1933, 2174, 2280
BmiI GGNNCC 7 cut(s) 144, 271, 2032, 2250, 2275, 2745, 3489
BmrFI CCNGG 9 cut(s) 490, 804, 1400, 1692, 1728, 2112, 2278, 3078, 3079
BmrI ACTGGG 3 cut(s) 1617, 1689, 2334
BmsI GCATC 3 cut(s) 720, 2358, 2508
BmtI GCTAGC 1 cut(s) 2912
BmuI ACTGGG 3 cut(s) 1617, 1689, 2334
BpiI GAAGAC 3 cut(s) 495, 1292, 3213
BplI GAGNNNNNCTC 2 cut(s) 3152, 3184
BpmI CTGGAG 4 cut(s) 187, 1185, 1891, 3179
Bpu10I CCTNAGC 1 cut(s) 1350
Bpu1102I GCTNAGC 1 cut(s) 1827
BpuEI CTTGAG 2 cut(s) 1586, 3070
BpuMI CCSGG 7 cut(s) 490, 804, 1400, 1728, 2278, 3078, 3079
Bsa29I ATCGAT 1 cut(s) 3186
BsaHI GRCGYC 2 cut(s) 207, 2151
BsaI GGTCTC 1 cut(s) 674
BsaJI CCNNGG 4 cut(s) 802, 1690, 2098, 3077
Bsc4I CCNNNNNNNGG 7 cut(s) 1872, 1914, 2189, 2245, 2453, 2568, 2753
Bse118I RCCGGY 4 cut(s) 641, 944, 1463, 1535
Bse21I CCTNAGG 2 cut(s) 836, 1329
Bse3DI GCAATG 3 cut(s) 1343, 1989, 2316
BseAI TCCGGA 3 cut(s) 309, 344, 574
BseBI CCWGG 2 cut(s) 1692, 2112
BseCI ATCGAT 1 cut(s) 3186
BseDI CCNNGG 4 cut(s) 802, 1690, 2098, 3077
BseGI GGATG 3 cut(s) 374, 2334, 3230
BseLI CCNNNNNNNGG 7 cut(s) 1872, 1914, 2189, 2245, 2453, 2568, 2753
BseMI GCAATG 3 cut(s) 1343, 1989, 2316
BseRI GAGGAG 5 cut(s) 331, 746, 3155, 3209, 3270
BseXI GCAGC 6 cut(s) 853, 2472, 2475, 2514, 2884, 2915
BsgI GTGCAG 3 cut(s) 1812, 2813, 2903
Bsh1236I CGCG 1 cut(s) 2902
Bsh1285I CGRYCG 2 cut(s) 3186, 3352
BshFI GGCC 5 cut(s) 1712, 2193, 2238, 2281, 3355
BshNI GGYRCC 1 cut(s) 2743
BshTI ACCGGT 3 cut(s) 944, 1463, 1535
BshVI ATCGAT 1 cut(s) 3186
BsiEI CGRYCG 2 cut(s) 3186, 3352
BsiHKAI GWGCWC 4 cut(s) 1151, 3062, 3165, 3405
BsiHKCI CYCGRG 3 cut(s) 377, 1589, 3077
BslFI GGGAC 6 cut(s) 1238, 1789, 1848, 2025, 2691, 3071
BslI CCNNNNNNNGG 7 cut(s) 1872, 1914, 2189, 2245, 2453, 2568, 2753
BsmBI CGTCTC 5 cut(s) 214, 662, 1741, 2158, 3339
BsmFI GGGAC 6 cut(s) 1238, 1789, 1848, 2025, 2691, 3071
BsmI GAATGC 1 cut(s) 2931
BsnI GGCC 5 cut(s) 1712, 2193, 2238, 2281, 3355
Bso31I GGTCTC 1 cut(s) 674
BsoBI CYCGRG 3 cut(s) 377, 1589, 3077
Bsp1286I GDGCHC 4 cut(s) 1151, 3062, 3165, 3405
Bsp13I TCCGGA 3 cut(s) 309, 344, 574
Bsp1407I TGTACA 2 cut(s) 1896, 3116
Bsp1720I GCTNAGC 1 cut(s) 1827
BspACI CCGC 6 cut(s) 956, 1831, 1949, 2244, 2336, 2525
BspANI GGCC 5 cut(s) 1712, 2193, 2238, 2281, 3355
BspDI ATCGAT 1 cut(s) 3186
BspEI TCCGGA 3 cut(s) 309, 344, 574
BspFNI CGCG 1 cut(s) 2902
BspHI TCATGA 2 cut(s) 2485, 3384
BspLI GGNNCC 7 cut(s) 144, 271, 2032, 2250, 2275, 2745, 3489
BspMI ACCTGC 2 cut(s) 1536, 3059
BspOI GCTAGC 1 cut(s) 2912
BspPI GGATC 8 cut(s) 19, 137, 150, 1517, 2122, 2602, 2647, 3182
BspQI GCTCTTC 1 cut(s) 1207
BspT107I GGYRCC 1 cut(s) 2743
BspTI CTTAAG 1 cut(s) 1027
BspTNI GGTCTC 1 cut(s) 674
BsrBI CCGCTC 1 cut(s) 1831
BsrDI GCAATG 3 cut(s) 1343, 1989, 2316
BsrFI RCCGGY 4 cut(s) 641, 944, 1463, 1535
BsrGI TGTACA 2 cut(s) 1896, 3116
BssAI RCCGGY 4 cut(s) 641, 944, 1463, 1535
BssECI CCNNGG 4 cut(s) 802, 1690, 2098, 3077
BssNI GRCGYC 2 cut(s) 207, 2151
BssSI CACGAG 3 cut(s) 63, 2284, 3477
BssT1I CCWWGG 1 cut(s) 2098
Bst2BI CACGAG 3 cut(s) 63, 2284, 3477
Bst2UI CCWGG 2 cut(s) 1692, 2112
Bst6I CTCTTC 7 cut(s) 421, 1197, 1207, 1476, 2754, 2769, 3245
BstACI GRCGYC 2 cut(s) 207, 2151
BstAFI CTTAAG 1 cut(s) 1027
BstAUI TGTACA 2 cut(s) 1896, 3116
BstC8I GCNNGC 4 cut(s) 486, 2910, 3062, 3066
BstF5I GGATG 3 cut(s) 374, 2334, 3230
BstFNI CGCG 1 cut(s) 2902
BstH2I RGCGCY 2 cut(s) 2384, 3036
BstHHI GCGC 3 cut(s) 2383, 2902, 3035
BstMCI CGRYCG 2 cut(s) 3186, 3352
BstMWI GCNNNNNNNGC 7 cut(s) 481, 717, 895, 1709, 1837, 2630, 2894
BstNI CCWGG 2 cut(s) 1692, 2112
BstNSI RCATGY 2 cut(s) 1504, 1903
BstSCI CCNGG 9 cut(s) 488, 802, 1398, 1690, 1726, 2110, 2276, 3076, 3077
BstSFI CTRYAG 5 cut(s) 1120, 1257, 1290, 1548, 3241
BstUI CGCG 1 cut(s) 2902
BstV1I GCAGC 6 cut(s) 853, 2472, 2475, 2514, 2884, 2915
BstV2I GAAGAC 3 cut(s) 495, 1292, 3213
BstX2I RGATCY 5 cut(s) 142, 1294, 1509, 2288, 2639
BstXI CCANNNNNNTGG 1 cut(s) 198
BstYI RGATCY 5 cut(s) 142, 1294, 1509, 2288, 2639
Bsu15I ATCGAT 1 cut(s) 3186
Bsu36I CCTNAGG 2 cut(s) 836, 1329
BsuRI GGCC 5 cut(s) 1712, 2193, 2238, 2281, 3355
BsuTUI ATCGAT 1 cut(s) 3186
BtgZI GCGATG 3 cut(s) 237, 571, 3315
BtsCI GGATG 3 cut(s) 374, 2334, 3230
BtsIMutI CAGTG 3 cut(s) 1161, 1314, 1386
BveI ACCTGC 2 cut(s) 1536, 3059
Cac8I GCNNGC 4 cut(s) 486, 2910, 3062, 3066
CaiI CAGNNNCTG 4 cut(s) 835, 1097, 1250, 2466
CciI TCATGA 2 cut(s) 2485, 3384
CfoI GCGC 3 cut(s) 2383, 2902, 3035
Cfr10I RCCGGY 4 cut(s) 641, 944, 1463, 1535
Cfr13I GGNCC 3 cut(s) 1933, 2174, 2280
Cfr9I CCCGGG 1 cut(s) 3077
ClaI ATCGAT 1 cut(s) 3186
CseI GACGC 3 cut(s) 196, 1723, 3321
Csp6I GTAC 8 cut(s) 195, 1172, 1897, 2431, 2744, 2797, 3072, 3117
CspAI ACCGGT 3 cut(s) 944, 1463, 1535
CspCI CAANNNNNGTGG 2 cut(s) 2830, 2865
CviQI GTAC 8 cut(s) 195, 1172, 1897, 2431, 2744, 2797, 3072, 3117
DraI TTTAAA 1 cut(s) 450
DrdI GACNNNNNNGTC 1 cut(s) 2150
DriI GACNNNNNGTC 1 cut(s) 2786
DseDI GACNNNNNNGTC 1 cut(s) 2150
EaeI YGGCCR 1 cut(s) 3353
Eam1104I CTCTTC 7 cut(s) 421, 1197, 1207, 1476, 2754, 2769, 3245
Eam1105I GACNNNNNGTC 1 cut(s) 2786
EarI CTCTTC 7 cut(s) 421, 1197, 1207, 1476, 2754, 2769, 3245
Ecl136II GAGCTC 3 cut(s) 1149, 3163, 3403
Eco130I CCWWGG 1 cut(s) 2098
Eco24I GRGCYC 3 cut(s) 1151, 3165, 3405
Eco31I GGTCTC 1 cut(s) 674
Eco32I GATATC 1 cut(s) 1991
Eco47I GGWCC 2 cut(s) 1933, 2174
Eco47III AGCGCT 1 cut(s) 3034
Eco53kI GAGCTC 3 cut(s) 1149, 3163, 3403
Eco57I CTGAAG 2 cut(s) 348, 1979
Eco81I CCTNAGG 2 cut(s) 836, 1329
Eco88I CYCGRG 3 cut(s) 377, 1589, 3077
EcoICRI GAGCTC 3 cut(s) 1149, 3163, 3403
EcoRI GAATTC 2 cut(s) 601, 1818
EcoRII CCWGG 2 cut(s) 1690, 2110
EcoRV GATATC 1 cut(s) 1991
EcoT14I CCWWGG 1 cut(s) 2098
EcoT38I GRGCYC 3 cut(s) 1151, 3165, 3405
ErhI CCWWGG 1 cut(s) 2098
Esp3I CGTCTC 5 cut(s) 214, 662, 1741, 2158, 3339
FalI AAGNNNNNCTT 2 cut(s) 2766, 2798
FaqI GGGAC 6 cut(s) 1238, 1789, 1848, 2025, 2691, 3071
FauI CCCGC 2 cut(s) 2237, 2329
FblI GTMKAC 1 cut(s) 2616
Fnu4HI GCNGC 7 cut(s) 842, 2461, 2464, 2525, 2528, 2898, 2929
FokI GGATG 3 cut(s) 381, 2341, 3237
FriOI GRGCYC 3 cut(s) 1151, 3165, 3405
Fsp4HI GCNGC 7 cut(s) 842, 2461, 2464, 2525, 2528, 2898, 2929
FspBI CTAG 8 cut(s) 219, 911, 1053, 1521, 2120, 2478, 2909, 2978
GlaI GCGC 3 cut(s) 2382, 2901, 3034
GluI GCNGC 7 cut(s) 842, 2461, 2464, 2525, 2528, 2898, 2929
GsuI CTGGAG 4 cut(s) 187, 1185, 1891, 3179
HaeII RGCGCY 2 cut(s) 2384, 3036
HaeIII GGCC 5 cut(s) 1712, 2193, 2238, 2281, 3355
HgaI GACGC 3 cut(s) 196, 1723, 3321
HhaI GCGC 3 cut(s) 2383, 2902, 3035
Hin1I GRCGYC 2 cut(s) 207, 2151
Hin6I GCGC 3 cut(s) 2381, 2900, 3033
HinP1I GCGC 3 cut(s) 2381, 2900, 3033
HincII GTYRAC 2 cut(s) 94, 2025
HindII GTYRAC 2 cut(s) 94, 2025
HindIII AAGCTT 2 cut(s) 1562, 2812
HpaI GTTAAC 2 cut(s) 94, 2025
Hpy166II GTNNAC 8 cut(s) 58, 94, 1046, 1161, 1697, 1745, 2025, 2617
Hpy8I GTNNAC 8 cut(s) 58, 94, 1046, 1161, 1697, 1745, 2025, 2617
Hpy99I CGWCG 4 cut(s) 89, 92, 1040, 2206
HpyAV CCTTC 7 cut(s) 519, 1763, 1808, 2392, 2404, 2453, 2839
HpyCH4IV ACGT 8 cut(s) 90, 432, 764, 1436, 2151, 2204, 2505, 2970
HpyF10VI GCNNNNNNNGC 7 cut(s) 481, 717, 895, 1709, 1837, 2630, 2894
HpySE526I ACGT 8 cut(s) 90, 432, 764, 1436, 2151, 2204, 2505, 2970
Hsp92I GRCGYC 2 cut(s) 207, 2151
HspAI GCGC 3 cut(s) 2381, 2900, 3033
Kpn2I TCCGGA 3 cut(s) 309, 344, 574
KpnI GGTACC 1 cut(s) 2747
KspAI GTTAAC 2 cut(s) 94, 2025
LguI GCTCTTC 1 cut(s) 1207
LmnI GCTCC 8 cut(s) 759, 886, 1917, 2894, 3160, 3168, 3257, 3487
Lsp1109I GCAGC 6 cut(s) 853, 2472, 2475, 2514, 2884, 2915
LweI GCATC 3 cut(s) 720, 2358, 2508
MaeI CTAG 8 cut(s) 219, 911, 1053, 1521, 2120, 2478, 2909, 2978
MaeII ACGT 8 cut(s) 90, 432, 764, 1436, 2151, 2204, 2505, 2970
MaeIII GTNAC 8 cut(s) 161, 185, 518, 637, 1523, 1910, 2671, 3283
MbiI CCGCTC 1 cut(s) 1831
MfeI CAATTG 1 cut(s) 2064
MflI RGATCY 5 cut(s) 142, 1294, 1509, 2288, 2639
MhlI GDGCHC 4 cut(s) 1151, 3062, 3165, 3405
MlyI GAGTC 6 cut(s) 53, 240, 322, 407, 1864, 2121
MmeI TCCRAC 3 cut(s) 120, 1383, 2471
MroI TCCGGA 3 cut(s) 309, 344, 574
MroXI GAANNNNTTC 1 cut(s) 1818
MslI CAYNNNNRTG 5 cut(s) 1037, 1499, 1892, 1898, 3389
MspA1I CMGCKG 2 cut(s) 2466, 2527
MspCI CTTAAG 1 cut(s) 1027
MspR9I CCNGG 9 cut(s) 490, 804, 1400, 1692, 1728, 2112, 2278, 3078, 3079
MunI CAATTG 1 cut(s) 2064
Mva1269I GAATGC 1 cut(s) 2931
MvaI CCWGG 2 cut(s) 1692, 2112
MvnI CGCG 1 cut(s) 2902
MwoI GCNNNNNNNGC 7 cut(s) 481, 717, 895, 1709, 1837, 2630, 2894
NciI CCSGG 7 cut(s) 490, 804, 1400, 1728, 2278, 3078, 3079
NheI GCTAGC 1 cut(s) 2908
NlaIV GGNNCC 7 cut(s) 144, 271, 2032, 2250, 2275, 2745, 3489
NmuCI GTSAC 3 cut(s) 185, 637, 2671
NspI RCATGY 2 cut(s) 1504, 1903
OliI CACNNNNGTG 1 cut(s) 1037
PaeR7I CTCGAG 1 cut(s) 377
PagI TCATGA 2 cut(s) 2485, 3384
PciI ACATGT 1 cut(s) 1899
PciSI GCTCTTC 1 cut(s) 1207
PcsI WCGNNNNNNNCGW 1 cut(s) 93
PctI GAATGC 1 cut(s) 2931
PdmI GAANNNNTTC 1 cut(s) 1818
PfoI TCCNGGA 1 cut(s) 1398
PinAI ACCGGT 3 cut(s) 944, 1463, 1535
PkrI GCNGC 7 cut(s) 843, 2462, 2465, 2526, 2529, 2899, 2930
Ple19I CGATCG 2 cut(s) 3186, 3352
PleI GAGTC 6 cut(s) 53, 239, 321, 407, 1864, 2121
PpsI GAGTC 6 cut(s) 53, 239, 321, 407, 1864, 2121
PscI ACATGT 1 cut(s) 1899
Psp124BI GAGCTC 3 cut(s) 1151, 3165, 3405
Psp1406I AACGTT 4 cut(s) 764, 1436, 2505, 2970
Psp6I CCWGG 2 cut(s) 1690, 2110
PspGI CCWGG 2 cut(s) 1690, 2110
PspN4I GGNNCC 7 cut(s) 144, 271, 2032, 2250, 2275, 2745, 3489
PspPI GGNCC 3 cut(s) 1933, 2174, 2280
PsrI GAACNNNNNNTAC 2 cut(s) 2257, 2289
PstNI CAGNNNCTG 4 cut(s) 835, 1097, 1250, 2466
PsuI RGATCY 5 cut(s) 142, 1294, 1509, 2288, 2639
PvuI CGATCG 2 cut(s) 3186, 3352
PvuII CAGCTG 1 cut(s) 2466
RsaI GTAC 8 cut(s) 196, 1173, 1898, 2432, 2745, 2798, 3073, 3118
RsaNI GTAC 8 cut(s) 195, 1172, 1897, 2431, 2744, 2797, 3072, 3117
RseI CAYNNNNRTG 5 cut(s) 1037, 1499, 1892, 1898, 3389
SacI GAGCTC 3 cut(s) 1151, 3165, 3405
SapI GCTCTTC 1 cut(s) 1207
SatI GCNGC 7 cut(s) 842, 2461, 2464, 2525, 2528, 2898, 2929
Sau96I GGNCC 3 cut(s) 1933, 2174, 2280
SchI GAGTC 6 cut(s) 53, 240, 322, 407, 1864, 2121
ScrFI CCNGG 9 cut(s) 490, 804, 1400, 1692, 1728, 2112, 2278, 3078, 3079
SduI GDGCHC 4 cut(s) 1151, 3062, 3165, 3405
SfaNI GCATC 3 cut(s) 720, 2358, 2508
SfcI CTRYAG 5 cut(s) 1120, 1257, 1290, 1548, 3241
Sfr274I CTCGAG 1 cut(s) 377
SgrAI CRCCGGYG 1 cut(s) 641
SinI GGWCC 2 cut(s) 1933, 2174
SlaI CTCGAG 1 cut(s) 377
SmaI CCCGGG 1 cut(s) 3079
SmiMI CAYNNNNRTG 5 cut(s) 1037, 1499, 1892, 1898, 3389
SmlI CTYRAG 4 cut(s) 377, 1027, 1565, 3049
SmoI CTYRAG 4 cut(s) 377, 1027, 1565, 3049
SsiI CCGC 6 cut(s) 956, 1831, 1949, 2244, 2336, 2525
SspMI CTAG 8 cut(s) 219, 911, 1053, 1521, 2120, 2478, 2909, 2978
SstI GAGCTC 3 cut(s) 1151, 3165, 3405
StyD4I CCNGG 9 cut(s) 488, 802, 1398, 1690, 1726, 2110, 2276, 3076, 3077
StyI CCWWGG 1 cut(s) 2098
TaiI ACGT 8 cut(s) 93, 435, 767, 1439, 2154, 2207, 2508, 2973
TaqI TCGA 9 cut(s) 378, 548, 618, 759, 904, 921, 2734, 3186, 3468
TatI WGTACW 5 cut(s) 194, 1896, 2430, 2796, 3116
TauI GCSGC 1 cut(s) 2527
TscAI CASTG 3 cut(s) 1168, 1321, 1393
TseFI GTSAC 3 cut(s) 185, 637, 2671
TseI GCWGC 6 cut(s) 841, 2460, 2463, 2527, 2897, 2928
Tsp45I GTSAC 3 cut(s) 185, 637, 2671
TspGWI ACGGA 4 cut(s) 425, 1793, 2823, 3159
TspMI CCCGGG 1 cut(s) 3077
TspRI CASTG 3 cut(s) 1168, 1321, 1393
Vha464I CTTAAG 1 cut(s) 1027
VpaK11BI GGWCC 2 cut(s) 1933, 2174
XapI RAATTY 5 cut(s) 601, 823, 1818, 2005, 2737
XbaI TCTAGA 3 cut(s) 910, 1052, 2977
XceI RCATGY 2 cut(s) 1504, 1903
XhoI CTCGAG 1 cut(s) 377
XmaI CCCGGG 1 cut(s) 3077
XmiI GTMKAC 1 cut(s) 2616
XmnI GAANNNNTTC 1 cut(s) 1818
XspI CTAG 8 cut(s) 219, 911, 1053, 1521, 2120, 2478, 2909, 2978
ZraI GACGTC 1 cut(s) 2152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.