FvH4_3g41420
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0002466
Physical Location & Seq
Forward (+)
34779512 .. 34783454
3943 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g41420.t1

Sequence Viewer

Length: 3582 bp
ATGATGGGTTTGTTCTGTTTTCTTGTTCTGCTTCTCTTTCACTCTCTAAGTTTGGGTTCAGCTGCTTCTAATGAGGATGTGGTGAAGAAGCTTTTGTTGGCGTTCAAGCAATCCTCTGTTCAATCTGACCCTCATGGTTTCTTATCTGACTGGAAATCTGATTCTTCAACAGCTCTTTGTTCCTGGAAAGGCCTGACTTGCTCTGAAGGCCATGTCATCACCCTTGACCTCTCCTCTTTTGGTCTCATTGGAAGTCTTCACCTTCCAACCCTCACAGCCTTGCCGAGTCTTCAAAATCTGTACTTGCAAGGCAATTCTTTCTCTGCTTCTGATCTTTCTGTTTCCAACATTACCTCATGTAGTCTTGTAACAGTTGACTTGTCCTCCAACAACATCACAAGCCCTCTTCCTGTTCAGTCTTTTCTTGAGGGTTGTGAGCATCTGGCCTCGGTCAACCTCTCTGGTAATTCCATCCCAGGAGGGAGTTTCCGCTTCGGTGCTTCTTTGCTTCAGCTTGACATCTCTAGAAACCGGATTTCGGATCCGTCCTTGTTGACTTGCCAGAATCTTAATCTGCTCAATGTTTCCGGTAACAAGCTCACCGGAAAGCTGAGTGGTTCTATCTTGTCTGGCAAGAATCTGACAACACTTGACCTTTCATACAATGCTTTGTCAGGGGAGATACCAAACACTTTCCTGGAAAGCGCCTCGGCATCACTCAAGTATTTGGATCTCTCGAGCAACAATTTCACTGGAAAGTTTGCAAGCCTTGATTTCGGGCAGTGCAGCAGCCTCACTTTGCTGAAACTATCACACAATAATCTCTATGGGGATGAGTTTCCTTCAAGCCTTGCCAACTGTCAAGCTTTGGAGACACTGAACCTGACTAGTAATAAGTTGCAGGACAAGATTCCAGGTGCTTTGTTGGGAAATCTCAAGAAATTGAGGCAACTCTTTCTGGGTCGTAATCAGTTTTCTGGTGTAATTCCAGCTGAATTAGGAAAGGCCTGTGGGACACTCCAGGAGCTTGATATTTCTGATAACATTCTTACTGGTGAATTGCCTTCAAGTTTTGTGTCATGCACTTCTTTGGTTACTCTAAATCTTGGTCGCAATCAGCTATCAGGAAATTTCCTCAATACTGTTGTGAGTAAGCTTCCTAGTTTGAGATATCTGTATGTACCCTTCAACAACATAACTGGTCCTGTGCCACCCTCTATTACCAATGGTACTCGGCTTCAAGTGCTCGATCTCAGCGCTAATCTCTTCACAGGGAATGTTCCTTCAGGGTTTTGCTCCTCCAATGCTCCCTCAGCTTTGGAAAAGATACTTCTAGCTAACAATTTCCTCTCCGGGACTGTCCCATCAGAACTTGGAAACTGCAAGAACTTAAGAGCTATTGACCTGAGTTTCAACAGTTTGAGTGGTGCAATTCCTTCAGAAATTTGGACCTTGCCAAATCTTTCTGACTTGGTTATGTGGGCAAACAATCTCACTGGTAAAATCCCAGAAGGCATTTGCGTCAATGGAGGAAACCTGGAAACCCTGATTCTCAACAATAATCTCATTTCTGGAGTCATTCCAGAGTCTATTGGCAGCTGCACCAATATGATTTGGGTGTCACTATCTAGCAACCGGCTTACTGGAGCAATCCCTTCAGGTATTGGAAATCTCATTAAGCTTGCTATACTCCAGTTGGGTAATAATTCACTGTCTGGTCAGATTCCACCTGAGCTTGGCAAGTGTCAAAGCCTCATTTGGCTTGACCTAAACAGCAATGACCTAAATGGTTCTATCCCGTCAGAGCTTGCTAACCAGGCCGGCCTAGTCAATCCTGGAATTGTTTCTGGGAAGCAGTTTGCATTTGTTAGAAATGAGGGTGGTACAGCTTGCAGGGGTGCAGGAGGTTTAGTTGAGTTTGAGGGAGTCCGACCTCAGAGACTCGAAAGTTTACCTATGGTTCATTCTTGCCCATCAACGAGAATTTACACAGGGTTGACAGTTTACACATTCACCAGCAATGGAAGCATGATCTTCCTTGACATTTCCTACAATTCCTTGTCTGGGACTATTCCCGCAAACCTAGGTAATCTGTCCTATTTGCAAGTCTTCAATCTAGGACACAATATGTTAGGTGGAAATATTCCAGAGAGCTTTGGAGGATTGAAAGCAGTTGGAGTCCTGGATCTCTCTCACAATAATCTTCAAGGTTATGTCCCAGGATCTTTGGGGACTCTCTCTTTCCTGAGTGACCTTGATGTGTCTAACAACAACCTCACCGGTCTCATCCCTTCTGGAGGTCAGCTTACCACTTTCCCAGCATCCAGATATGAGAACAACTCTGGCCTTTGTGGGTTACCCCTGCCACCGTGTGGCTCTCAAAGACATTCAGCAGAGAGATTTAAGGGAAAGAAGCCGTCTATGGCTTCAGGAATGGTCATTGGTATTACATTCTTTCTCTTCTGTATCCTTCTTATACTTGCATTAGCTCTATATCGAGTAAAGAAATACCAGCAGAAAGAGGCAAAGAGCGAAAAATATATTGAAAGCCTTCCGACTTCAGGGAGCAGCAGCTGGAAACTTTCCGGTGTGGCTGAGCCTCTCAGCATCAATGTAGCTACATTTGAGAAACCTTTGCGGAAGCTGACCTTTGCCCATTTACTTGAAGCCACCAATGGTTTCAGTGCAGATAGCTTGATTGGTTCTGGAGGATTTGGTGAGGTGTATAAGGCACAATTGGGAGATGGCTGTGTTGTTGCAATCAAGAAGCTTATTCAAGTCACAGGTCAAGGAGACCGAGAGTTTATGGCCGAAATGGAAACTATTGGGAAAATCAAGCACCGAAACCTGGTTCCTTTACTGGGGTACTGCAAGGTTGGAGAGGAGAGACTTCTTGTGTATGAGTACATGAAGTGGGGTAGTCTGGAGAGTGTTTTTCATGACAAAATTAAGGGAGGGGGCTCGAGGCTTGACTGGGCAGCACGAAAGAAGATTGCCATAGGGTCTGCTAGAGGTTTAGCATTCCTTCATCATAGCTGCATACCTCATATTATCCACCGCGACATGAAGTCCAGCAATGTTCTTATAGATGAAAACTTTGAGGCCAGAGTATCAGATTTTGGCATGGCAAGATTGGTTAATGCCCTCGATACTCATCTTAGTGTGAGCACGCTAGCAGGAACTCCAGGTTACGTGCCCCCTGAGTACTACCAGAGTTTTCGATGCACAACAAAAGGAGATGTCTACAGTTACGGTGTTATACTGCTAGAGCTTCTCTCAGGAAGAAGGCCTATAGACCCATCAGCGTTTGGTGATGACAACAACCTTGTTGGATGGGCAAAGCAGCTTCAAAGAGAAAAGAGATGGGATCAGATACTTGACGCTGAGTTGTTGACACAGACATCTGGTGAGGCTGAACTATACCAGTATCTGAATATTGCCTTTGAGTGCCTAGACGACAGGCCATTCCGGCGTCCAACAATGATTCAGGTTATGGCTATGTTTAAAGAGCTTCAGGTTGATTCCGAAAGTGATGTCCTGGATGGCTTTTCACTGAAGGACACTGTTGCTGAGGAACCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase

Protein Analysis

1194

Amino Acids

128.34

Weight (kDa)

6.04

Isoelectric Point (pI)

33.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 68 1.2e-08 Leucine rich repeat N-terminal domain
LRR_4 PF12799 212 - 257 1e-05 Leucine Rich repeats (2 copies)
LRR_14 PF23598 282 - 392 1.5e-06 Leucine-rich repeat region
LRR_8 PF13855 339 - 399 1.2e-07 Leucine rich repeat
Island PF20141 608 - 672 2.2e-31 Brassinosteroid receptor island domain
LRR_8 PF13855 716 - 759 2.4e-06 Leucine rich repeat
Pkinase PF00069 896 - 1166 3.1e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 897 - 1166 5.4e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 2372
AccI GTMKAC 1 cut(s) 3243
AccII CGCG 1 cut(s) 3060
AciI CCGC 4 cut(s) 490, 2076, 2638, 3058
AclWI GGATC 6 cut(s) 536, 549, 738, 2193, 2230, 3375
AcoI YGGCCR 1 cut(s) 2808
AcsI RAATTY 3 cut(s) 1129, 1443, 1983
AcuI CTGAAG 9 cut(s) 225, 494, 1269, 1422, 1641, 2412, 2544, 3497, 3575
AcyI GRCGYC 1 cut(s) 3472
AdeI CACNNNGTG 1 cut(s) 2372
AfaI GTAC 7 cut(s) 302, 1182, 1231, 1885, 2867, 2906, 3206
AfeI AGCGCT 1 cut(s) 1258
AfiI CCNNNNNNNGG 8 cut(s) 538, 1736, 2064, 2297, 2372, 2561, 2848, 2861
AflII CTTAAG 1 cut(s) 1390
AgeI ACCGGT 1 cut(s) 2279
AhdI GACNNNNNGTC 1 cut(s) 3067
AhlI ACTAGT 1 cut(s) 887
AjuI GAANNNNNNNTTGG 2 cut(s) 80, 112
Alw21I GWGCWC 2 cut(s) 1248, 3170
Alw26I GTCTC 6 cut(s) 248, 866, 1933, 2288, 2787, 2881
AlwI GGATC 6 cut(s) 536, 549, 738, 2193, 2230, 3375
AlwNI CAGNNNCTG 2 cut(s) 2574, 3430
Ama87I CYCGRG 2 cut(s) 736, 2962
Aor51HI AGCGCT 1 cut(s) 1258
ApoI RAATTY 3 cut(s) 1129, 1443, 1983
ArsI GACNNNNNNTTYG 2 cut(s) 3519, 3551
AsiGI ACCGGT 1 cut(s) 2279
Asp700I GAANNNNTTC 2 cut(s) 1843, 2550
AspA2I CCTAGG 1 cut(s) 2083
AspLEI GCGC 2 cut(s) 707, 1259
AspS9I GGNCC 2 cut(s) 1202, 1449
AsuC2I CCSGG 1 cut(s) 1354
AsuNHI GCTAGC 1 cut(s) 3172
AvaI CYCGRG 2 cut(s) 736, 2962
AvaII GGWCC 2 cut(s) 1202, 1449
AvrII CCTAGG 1 cut(s) 2083
BaeGI GKGCMC 1 cut(s) 3198
BamHI GGATCC 1 cut(s) 541
BanII GRGCYC 1 cut(s) 2963
BarI GAAGNNNNNNTAC 2 cut(s) 1169, 1201
BbsI GAAGAC 3 cut(s) 248, 281, 2101
Bbv12I GWGCWC 2 cut(s) 1248, 3170
BbvCI CCTCAGC 2 cut(s) 1312, 3570
BccI CCATC 8 cut(s) 479, 1372, 1981, 2738, 3307, 3327, 3357, 3536
BceAI ACGGC 1 cut(s) 2401
BciVI GTATCC 1 cut(s) 2477
BcnI CCSGG 1 cut(s) 1354
BcoDI GTCTC 6 cut(s) 248, 866, 1933, 2288, 2787, 2881
BcuI ACTAGT 1 cut(s) 887
BfmI CTRYAG 2 cut(s) 3244, 3291
BfoI RGCGCY 2 cut(s) 708, 1260
BfrI CTTAAG 1 cut(s) 1390
BfuI GTATCC 1 cut(s) 2477
BglI GCCNNNNNGGC 1 cut(s) 3469
BlnI CCTAGG 1 cut(s) 2083
BlpI GCTNAGC 1 cut(s) 2595
BmcAI AGTACT 1 cut(s) 3206
Bme18I GGWCC 2 cut(s) 1202, 1449
BmeRI GACNNNNNGTC 1 cut(s) 3067
BmeT110I CYCGRG 2 cut(s) 736, 2962
BmgT120I GGNCC 2 cut(s) 1202, 1449
BmiI GGNNCC 3 cut(s) 543, 2853, 3576
BmrI ACTGGG 2 cut(s) 2870, 2983
BmsI GCATC 5 cut(s) 448, 722, 2330, 2616, 3212
BmtI GCTAGC 1 cut(s) 3176
BmuI ACTGGG 2 cut(s) 2870, 2983
BpiI GAAGAC 3 cut(s) 248, 281, 2101
BplI GAGNNNNNCTC 4 cut(s) 2324, 2356, 3260, 3292
BpmI CTGGAG 8 cut(s) 1004, 1593, 1665, 1676, 2316, 2727, 2945, 3168
Bpu10I CCTNAGC 3 cut(s) 1312, 1731, 3570
Bpu1102I GCTNAGC 1 cut(s) 2595
BpuEI CTTGAG 3 cut(s) 446, 704, 920
BpuMI CCSGG 1 cut(s) 1354
BsaAI YACGTR 1 cut(s) 3193
BsaBI GATNNNNATC 1 cut(s) 3153
BsaHI GRCGYC 1 cut(s) 3472
BsaI GGTCTC 3 cut(s) 248, 2288, 2787
BsaJI CCNNGG 5 cut(s) 447, 475, 708, 2083, 2218
BsaWI WCCGGW 5 cut(s) 531, 587, 602, 2279, 2585
BsaXI ACNNNNNCTCC 4 cut(s) 368, 398, 1896, 1926
Bsc4I CCNNNNNNNGG 8 cut(s) 538, 1736, 2064, 2297, 2372, 2561, 2848, 2861
Bse118I RCCGGY 3 cut(s) 1635, 1820, 2279
Bse3DI GCAATG 3 cut(s) 1783, 2026, 3082
Bse8I GATNNNNATC 1 cut(s) 3153
BseDI CCNNGG 5 cut(s) 447, 475, 708, 2083, 2218
BseGI GGATG 7 cut(s) 82, 471, 838, 2286, 2321, 3338, 3547
BseJI GATNNNNATC 1 cut(s) 3153
BseLI CCNNNNNNNGG 8 cut(s) 538, 1736, 2064, 2297, 2372, 2561, 2848, 2861
BseMI GCAATG 3 cut(s) 1783, 2026, 3082
BseRI GAGGAG 3 cut(s) 223, 1288, 2897
BseSI GKGCMC 1 cut(s) 3198
BseYI CCCAGC 1 cut(s) 2317
BsgI GTGCAG 4 cut(s) 805, 1585, 1920, 2706
Bsh1236I CGCG 1 cut(s) 3060
BshTI ACCGGT 1 cut(s) 2279
BsiHKAI GWGCWC 2 cut(s) 1248, 3170
BsiHKCI CYCGRG 2 cut(s) 736, 2962
BsiSI CCGG 9 cut(s) 532, 588, 603, 1353, 1636, 1821, 2280, 2586, 3469
BslFI GGGAC 6 cut(s) 1027, 1346, 1369, 2080, 2201, 2245
BslI CCNNNNNNNGG 8 cut(s) 538, 1736, 2064, 2297, 2372, 2561, 2848, 2861
BsmAI GTCTC 6 cut(s) 248, 866, 1933, 2288, 2787, 2881
BsmFI GGGAC 6 cut(s) 1027, 1346, 1369, 2080, 2201, 2245
BsmI GAATGC 1 cut(s) 3020
Bso31I GGTCTC 3 cut(s) 248, 2288, 2787
BsoBI CYCGRG 2 cut(s) 736, 2962
Bsp1286I GDGCHC 4 cut(s) 1248, 2963, 3170, 3198
Bsp143I GATC 8 cut(s) 331, 541, 730, 1249, 2031, 2185, 2222, 3367
Bsp1720I GCTNAGC 1 cut(s) 2595
BspACI CCGC 4 cut(s) 490, 2076, 2638, 3058
BspFNI CGCG 1 cut(s) 3060
BspHI TCATGA 1 cut(s) 2938
BspLI GGNNCC 3 cut(s) 543, 2853, 3576
BspOI GCTAGC 1 cut(s) 3176
BspPI GGATC 6 cut(s) 536, 549, 738, 2193, 2230, 3375
BspTI CTTAAG 1 cut(s) 1390
BspTNI GGTCTC 3 cut(s) 248, 2288, 2787
BsrDI GCAATG 3 cut(s) 1783, 2026, 3082
BsrFI RCCGGY 3 cut(s) 1635, 1820, 2279
BssAI RCCGGY 3 cut(s) 1635, 1820, 2279
BssECI CCNNGG 5 cut(s) 447, 475, 708, 2083, 2218
BssMI GATC 8 cut(s) 331, 541, 730, 1249, 2031, 2185, 2222, 3367
BssNI GRCGYC 1 cut(s) 3472
BssT1I CCWWGG 1 cut(s) 2083
Bst6I CTCTTC 3 cut(s) 411, 1271, 2465
BstACI GRCGYC 1 cut(s) 3472
BstAFI CTTAAG 1 cut(s) 1390
BstBAI YACGTR 1 cut(s) 3193
BstC8I GCNNGC 7 cut(s) 766, 1683, 1809, 1822, 1891, 3170, 3174
BstEII GGTNACC 1 cut(s) 2355
BstENI CCTNNNNNAGG 1 cut(s) 2295
BstF5I GGATG 7 cut(s) 82, 471, 838, 2286, 2321, 3338, 3547
BstFNI CGCG 1 cut(s) 3060
BstH2I RGCGCY 2 cut(s) 708, 1260
BstHHI GCGC 2 cut(s) 707, 1259
BstKTI GATC 8 cut(s) 334, 544, 733, 1252, 2034, 2188, 2225, 3370
BstMAI GTCTC 6 cut(s) 248, 866, 1933, 2288, 2787, 2881
BstMBI GATC 8 cut(s) 331, 541, 730, 1249, 2031, 2185, 2222, 3367
BstMWI GCNNNNNNNGC 7 cut(s) 198, 207, 1243, 1313, 1817, 2025, 3469
BstPI GGTNACC 1 cut(s) 2355
BstSFI CTRYAG 2 cut(s) 3244, 3291
BstSLI GKGCMC 1 cut(s) 3198
BstUI CGCG 1 cut(s) 3060
BstV2I GAAGAC 3 cut(s) 248, 281, 2101
BstX2I RGATCY 4 cut(s) 541, 730, 2185, 2222
BstYI RGATCY 4 cut(s) 541, 730, 2185, 2222
BsuI GTATCC 1 cut(s) 2477
BtsCI GGATG 7 cut(s) 82, 471, 838, 2286, 2321, 3338, 3547
BtsI GCAGTG 1 cut(s) 788
BtsIMutI CAGTG 8 cut(s) 750, 788, 875, 1494, 1709, 2689, 3551, 3561
Cac8I GCNNGC 7 cut(s) 766, 1683, 1809, 1822, 1891, 3170, 3174
CaiI CAGNNNCTG 2 cut(s) 2574, 3430
CciI TCATGA 1 cut(s) 2938
CfoI GCGC 2 cut(s) 707, 1259
Cfr10I RCCGGY 3 cut(s) 1635, 1820, 2279
Cfr13I GGNCC 2 cut(s) 1202, 1449
CseI GACGC 3 cut(s) 1510, 3389, 3461
CsiI ACCWGGT 1 cut(s) 2847
Csp6I GTAC 7 cut(s) 301, 1181, 1230, 1884, 2866, 2905, 3205
CspAI ACCGGT 1 cut(s) 2279
CviAII CATG 9 cut(s) 134, 212, 357, 1080, 2029, 2908, 2939, 3064, 3124
CviQI GTAC 7 cut(s) 301, 1181, 1230, 1884, 2866, 2905, 3205
DpnI GATC 8 cut(s) 333, 543, 732, 1251, 2033, 2187, 2224, 3369
DpnII GATC 8 cut(s) 331, 541, 730, 1249, 2031, 2185, 2222, 3367
DraI TTTAAA 1 cut(s) 3505
DraIII CACNNNGTG 1 cut(s) 2372
DriI GACNNNNNGTC 1 cut(s) 3067
EaeI YGGCCR 1 cut(s) 2808
Eam1104I CTCTTC 3 cut(s) 411, 1271, 2465
Eam1105I GACNNNNNGTC 1 cut(s) 3067
EarI CTCTTC 3 cut(s) 411, 1271, 2465
Eco130I CCWWGG 1 cut(s) 2083
Eco147I AGGCCT 3 cut(s) 192, 1007, 3289
Eco24I GRGCYC 1 cut(s) 2963
Eco31I GGTCTC 3 cut(s) 248, 2288, 2787
Eco32I GATATC 1 cut(s) 1172
Eco47I GGWCC 2 cut(s) 1202, 1449
Eco47III AGCGCT 1 cut(s) 1258
Eco57I CTGAAG 9 cut(s) 225, 494, 1269, 1422, 1641, 2412, 2544, 3497, 3575
Eco88I CYCGRG 2 cut(s) 736, 2962
Eco91I GGTNACC 1 cut(s) 2355
EcoNI CCTNNNNNAGG 1 cut(s) 2295
EcoO65I GGTNACC 1 cut(s) 2355
EcoRV GATATC 1 cut(s) 1172
EcoT14I CCWWGG 1 cut(s) 2083
EcoT38I GRGCYC 1 cut(s) 2963
ErhI CCWWGG 1 cut(s) 2083
FaeI CATG 9 cut(s) 137, 215, 360, 1083, 2032, 2911, 2942, 3067, 3127
FalI AAGNNNNNCTT 2 cut(s) 2633, 2665
FaqI GGGAC 6 cut(s) 1027, 1346, 1369, 2080, 2201, 2245
FatI CATG 9 cut(s) 133, 211, 356, 1079, 2028, 2907, 2938, 3063, 3123
FauI CCCGC 1 cut(s) 2083
FblI GTMKAC 1 cut(s) 3243
FokI GGATG 7 cut(s) 89, 458, 845, 2273, 2308, 3345, 3554
FriOI GRGCYC 1 cut(s) 2963
FseI GGCCGGCC 1 cut(s) 1824
GlaI GCGC 2 cut(s) 706, 1258
GsaI CCCAGC 1 cut(s) 2321
GsuI CTGGAG 8 cut(s) 1004, 1593, 1665, 1676, 2316, 2727, 2945, 3168
HaeII RGCGCY 2 cut(s) 708, 1260
HapII CCGG 9 cut(s) 532, 588, 603, 1353, 1636, 1821, 2280, 2586, 3469
HgaI GACGC 3 cut(s) 1510, 3389, 3461
HhaI GCGC 2 cut(s) 707, 1259
Hin1I GRCGYC 1 cut(s) 3472
Hin1II CATG 9 cut(s) 137, 215, 360, 1083, 2032, 2911, 2942, 3067, 3127
Hin6I GCGC 2 cut(s) 705, 1257
HinP1I GCGC 2 cut(s) 705, 1257
HincII GTYRAC 5 cut(s) 376, 454, 555, 1998, 3393
HindII GTYRAC 5 cut(s) 376, 454, 555, 1998, 3393
HindIII AAGCTT 5 cut(s) 89, 864, 1154, 1679, 2768
HpaII CCGG 9 cut(s) 532, 588, 603, 1353, 1636, 1821, 2280, 2586, 3469
Hpy166II GTNNAC 8 cut(s) 376, 454, 555, 1952, 1998, 2005, 3244, 3393
Hpy8I GTNNAC 8 cut(s) 376, 454, 555, 1952, 1998, 2005, 3244, 3393
HpyCH4IV ACGT 1 cut(s) 3192
HpyF10VI GCNNNNNNNGC 7 cut(s) 198, 207, 1243, 1313, 1817, 2025, 3469
HpySE526I ACGT 1 cut(s) 3192
Hsp92I GRCGYC 1 cut(s) 3472
Hsp92II CATG 9 cut(s) 137, 215, 360, 1083, 2032, 2911, 2942, 3067, 3127
HspAI GCGC 2 cut(s) 705, 1257
KroI GCCGGC 1 cut(s) 1820
KroNI GCCGGC 1 cut(s) 1822
Kzo9I GATC 8 cut(s) 331, 541, 730, 1249, 2031, 2185, 2222, 3367
LmnI GCTCC 5 cut(s) 1024, 1301, 1312, 1646, 2565
LweI GCATC 5 cut(s) 448, 722, 2330, 2616, 3212
MabI ACCWGGT 1 cut(s) 2847
MaeII ACGT 1 cut(s) 3192
MaeIII GTNAC 9 cut(s) 367, 590, 1093, 1620, 2249, 2355, 2779, 3188, 3248
MalI GATC 8 cut(s) 333, 543, 732, 1251, 2033, 2187, 2224, 3369
MboI GATC 8 cut(s) 331, 541, 730, 1249, 2031, 2185, 2222, 3367
MfeI CAATTG 1 cut(s) 2735
MflI RGATCY 4 cut(s) 541, 730, 2185, 2222
MhlI GDGCHC 4 cut(s) 1248, 2963, 3170, 3198
MlyI GAGTC 7 cut(s) 295, 1584, 1595, 1935, 1935, 2187, 2227
MmeI TCCRAC 9 cut(s) 290, 369, 411, 1954, 2155, 2579, 2857, 3310, 3500
MroNI GCCGGC 1 cut(s) 1820
MroXI GAANNNNTTC 2 cut(s) 1843, 2550
MseI TTAA 7 cut(s) 570, 1391, 1677, 2403, 2949, 3138, 3504
MslI CAYNNNNRTG 2 cut(s) 1607, 3159
MspA1I CMGCKG 4 cut(s) 62, 992, 1599, 2574
MspCI CTTAAG 1 cut(s) 1390
MspI CCGG 9 cut(s) 532, 588, 603, 1353, 1636, 1821, 2280, 2586, 3469
MunI CAATTG 1 cut(s) 2735
Mva1269I GAATGC 1 cut(s) 3020
MvnI CGCG 1 cut(s) 3060
MwoI GCNNNNNNNGC 7 cut(s) 198, 207, 1243, 1313, 1817, 2025, 3469
NaeI GCCGGC 1 cut(s) 1822
NciI CCSGG 1 cut(s) 1354
NdeII GATC 8 cut(s) 331, 541, 730, 1249, 2031, 2185, 2222, 3367
NgoMIV GCCGGC 1 cut(s) 1820
NheI GCTAGC 1 cut(s) 3172
NlaIII CATG 9 cut(s) 137, 215, 360, 1083, 2032, 2911, 2942, 3067, 3127
NlaIV GGNNCC 3 cut(s) 543, 2853, 3576
NmeAIII GCCGAG 3 cut(s) 309, 689, 1213
NmuCI GTSAC 3 cut(s) 1620, 2249, 2779
PaeR7I CTCGAG 2 cut(s) 736, 2962
PagI TCATGA 1 cut(s) 2938
PceI AGGCCT 3 cut(s) 192, 1007, 3289
PctI GAATGC 1 cut(s) 3020
PdiI GCCGGC 1 cut(s) 1822
PdmI GAANNNNTTC 2 cut(s) 1843, 2550
PfeI GAWTC 8 cut(s) 161, 565, 637, 910, 1549, 1723, 3484, 3521
PflMI CCANNNNNTGG 1 cut(s) 2372
PfoI TCCNGGA 7 cut(s) 182, 696, 1020, 1352, 1834, 2181, 3537
PinAI ACCGGT 1 cut(s) 2279
PleI GAGTC 7 cut(s) 294, 1583, 1594, 1934, 1935, 2186, 2227
PpsI GAGTC 7 cut(s) 294, 1583, 1594, 1934, 1935, 2186, 2227
Ppu21I YACGTR 1 cut(s) 3193
PspEI GGTNACC 1 cut(s) 2355
PspFI CCCAGC 1 cut(s) 2317
PspN4I GGNNCC 3 cut(s) 543, 2853, 3576
PspPI GGNCC 2 cut(s) 1202, 1449
PspXI VCTCGAGB 1 cut(s) 2962
PstNI CAGNNNCTG 2 cut(s) 2574, 3430
PsuI RGATCY 4 cut(s) 541, 730, 2185, 2222
PvuII CAGCTG 4 cut(s) 62, 992, 1599, 2574
RigI GGCCGGCC 1 cut(s) 1824
RsaI GTAC 7 cut(s) 302, 1182, 1231, 1885, 2867, 2906, 3206
RsaNI GTAC 7 cut(s) 301, 1181, 1230, 1884, 2866, 2905, 3205
RseI CAYNNNNRTG 2 cut(s) 1607, 3159
SaqAI TTAA 7 cut(s) 570, 1391, 1677, 2403, 2949, 3138, 3504
Sau3AI GATC 8 cut(s) 331, 541, 730, 1249, 2031, 2185, 2222, 3367
Sau96I GGNCC 2 cut(s) 1202, 1449
ScaI AGTACT 1 cut(s) 3206
SchI GAGTC 7 cut(s) 295, 1584, 1595, 1935, 1935, 2187, 2227
SduI GDGCHC 4 cut(s) 1248, 2963, 3170, 3198
SexAI ACCWGGT 1 cut(s) 2847
SfaNI GCATC 5 cut(s) 448, 722, 2330, 2616, 3212
SfcI CTRYAG 2 cut(s) 3244, 3291
Sfr274I CTCGAG 2 cut(s) 736, 2962
SinI GGWCC 2 cut(s) 1202, 1449
SlaI CTCGAG 2 cut(s) 736, 2962
SmiMI CAYNNNNRTG 2 cut(s) 1607, 3159
SmlI CTYRAG 6 cut(s) 425, 719, 736, 935, 1390, 2962
SmoI CTYRAG 6 cut(s) 425, 719, 736, 935, 1390, 2962
SpeI ACTAGT 1 cut(s) 887
SseBI AGGCCT 3 cut(s) 192, 1007, 3289
SsiI CCGC 4 cut(s) 490, 2076, 2638, 3058
SspI AATATT 2 cut(s) 2143, 3436
StuI AGGCCT 3 cut(s) 192, 1007, 3289
StyI CCWWGG 1 cut(s) 2083
TaiI ACGT 1 cut(s) 3195
TaqI TCGA 7 cut(s) 737, 1248, 1944, 2497, 2963, 3147, 3220
TaqII GACCGA 2 cut(s) 439, 2811
TatI WGTACW 3 cut(s) 300, 2904, 3204
TfiI GAWTC 8 cut(s) 161, 565, 637, 910, 1549, 1723, 3484, 3521
Tru1I TTAA 7 cut(s) 570, 1391, 1677, 2403, 2949, 3138, 3504
Tru9I TTAA 7 cut(s) 570, 1391, 1677, 2403, 2949, 3138, 3504
TscAI CASTG 8 cut(s) 757, 788, 882, 1501, 1716, 2689, 3558, 3568
TseFI GTSAC 3 cut(s) 1620, 2249, 2779
Tsp45I GTSAC 3 cut(s) 1620, 2249, 2779
TspDTI ATGAA 7 cut(s) 648, 1952, 2924, 2927, 3017, 3080, 3105
TspGWI ACGGA 1 cut(s) 534
TspRI CASTG 8 cut(s) 757, 788, 882, 1501, 1716, 2689, 3558, 3568
Van91I CCANNNNNTGG 1 cut(s) 2372
Vha464I CTTAAG 1 cut(s) 1390
VpaK11BI GGWCC 2 cut(s) 1202, 1449
XagI CCTNNNNNAGG 1 cut(s) 2295
XapI RAATTY 3 cut(s) 1129, 1443, 1983
XbaI TCTAGA 1 cut(s) 524
XhoI CTCGAG 2 cut(s) 736, 2962
XmaJI CCTAGG 1 cut(s) 2083
XmiI GTMKAC 1 cut(s) 3243
XmnI GAANNNNTTC 2 cut(s) 1843, 2550
ZrmI AGTACT 1 cut(s) 3206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.