Rmu_sc0000573.1_g000018
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000573.1
Physical Location & Seq
Reverse (-)
71376 .. 73487
2112 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000573.1_g000018.1.cds

Sequence Viewer

Length: 2112 bp
atgagttgtgctggaatagtccccagaaagattcttattgaaactttgaaagcaaaacaacaaaatgaagagggaatagatcatcagaagatgatggctttgttctgttttctgcttctgcttctttttcactctctaaattttacttcagctgcttctaatcaggatgtggtgaagaagcttttgttgcagttcaagcaatcctctgttcaatctgaccctcatggtttcttatctgactggaaatctgattcttcaactgccctttgttcatggaaaggcctgacttgctctgaaggccacgtcatcaccctcgacctctcctattctggtctcattggaagtcttcaccttccaactctcacagccttgccaagtcttcagaatctgtacttgcaaggcaattcattctctgcttctgatctttcagtttccaacattaccacatgtagtcttgtaacaattgacttgtcctccaacaacatcacaagccctcttccggttcggtcttttcttgagggttgtgagaatctggctttggtcaacctctctggcaattcaatcccaggagggagtttcagctttggtgcttccttgcttcagcttgacatctctagaaacctgatttcggattcatccttgttgacttgccagaatctgaatctgctcaatgtttccggtaacaagctgaccggaaaactgagtgattctatcttgtcttgcaagaatctgacaacacttgacctttcatacaatgctttatctggggagatacccaacactttcctggaaagtggctctgcatctctcaagtatttggatctctcaagcaacaatttcactggaaagtttgcaagccttgatttcgggcagtgtagcagcctcacgttgctgaagctatcacacaataatctctatggggatgagtttccttcaagccttgctaactgtcaagctttggaaacactgaacctgactagtaataagttgcaggacaagattccgggtgctttgttgggaaatctcaagaagttgaggcaactctttctgggtcgcaatcagttttcgggtgaaattccagccgaattaggaaaggcttgtgggacacttcaggagcttgatatttctgataacattcttactggtgaattgccttcaagttttgtgtcgtgctcttctttggttagtctcaatcttggtcgcaatcagctctcaggaaatttcctcaatactgttgtgagtaagcttccgagtttgagatatctctatgtacccttcaacaacatcactggtcctgtgccaccatctattaccaatggtactcggcttcaagtgctcgatctcagcgctaatctcttcacagggagtgttccttcagtgttttgcttctccaatgctccctcagctttggaaaagatacttctagccaacaattttctctccgggactgtgccatcggaacttggaaactgcaagagcctgaaggctattgatctgagtttcaacagtttgagtggtgcaattcctttagaagtttggaccttgccaaatctttccgacttggttatgtgggcaaacaatctcactggtgaaatcccagaaggcatttgcatcaatggaggaaacctggaaaccctgattctcaacaataatctcattactggagccattccacagtcaattgccaactgcaccaatatgatttgggtgtcactatctagcaaccggcttacaggggcaatcccttcaggtattggaaatctccttaagcttgttatacttcagttgggtaataattcactgtctggtcagattccagctgagcttggcaagtgtcaaagcctcatttggcttgacctgaacagcaatgacctaaatggttctatcccatcagagcttgctaaccaggccggcctagtcattcctggaacagtttctggggagcagtttgcatttgttagaaatgagggtggtacagcttgcaggggtgcaggaggactagttgagtttgagggagtacgacctcagagactagaaagtttacctatggttcattcttgtccaacaactagaatttacacaggaatgacaaagacctccagcagaatctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

703

Amino Acids

74.94

Weight (kDa)

5.52

Isoelectric Point (pI)

35.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 828
AcsI RAATTY 4 cut(s) 139, 1074, 1219, 2073
AfaI GTAC 5 cut(s) 392, 1272, 1321, 1975, 2019
AfeI AGCGCT 1 cut(s) 1348
AfiI CCNNNNNNNGG 2 cut(s) 499, 628
AflII CTTAAG 1 cut(s) 1766
AflIII ACRYGT 1 cut(s) 446
AhlI ACTAGT 2 cut(s) 977, 1999
AjiI CACGTC 1 cut(s) 304
AjnI CCWGG 5 cut(s) 565, 786, 1626, 1905, 1924
AjuI GAANNNNNNNTTGG 2 cut(s) 521, 553
Alw21I GWGCWC 2 cut(s) 1175, 1338
Alw26I GTCTC 3 cut(s) 338, 1193, 2023
AlwI GGATC 1 cut(s) 828
AlwNI CAGNNNCTG 4 cut(s) 388, 658, 1937, 2109
Aor51HI AGCGCT 1 cut(s) 1348
AoxI GGCC 4 cut(s) 280, 298, 1908, 1912
ApeKI GCWGC 2 cut(s) 152, 879
ApoI RAATTY 4 cut(s) 139, 1074, 1219, 2073
Asp700I GAANNNNTTC 1 cut(s) 1933
AspLEI GCGC 1 cut(s) 1349
AspS9I GGNCC 2 cut(s) 1292, 1539
AsuC2I CCSGG 2 cut(s) 1005, 1444
AsuHPI GGTGA 6 cut(s) 184, 301, 341, 1082, 1157, 1601
AvaII GGWCC 2 cut(s) 1292, 1539
BbsI GAAGAC 2 cut(s) 338, 371
Bbv12I GWGCWC 2 cut(s) 1175, 1338
BbvCI CCTCAGC 1 cut(s) 1402
BbvI GCAGC 2 cut(s) 139, 891
BccI CCATC 4 cut(s) 88, 1312, 1462, 1897
BciT130I CCWGG 5 cut(s) 567, 788, 1628, 1907, 1926
BcnI CCSGG 2 cut(s) 1005, 1444
BcoDI GTCTC 3 cut(s) 338, 1193, 2023
BcuI ACTAGT 2 cut(s) 977, 1999
BfaI CTAG 8 cut(s) 615, 978, 1424, 1719, 1916, 2000, 2033, 2070
BfoI RGCGCY 1 cut(s) 1350
BfrI CTTAAG 1 cut(s) 1766
BisI GCNGC 2 cut(s) 153, 880
BlpI GCTNAGC 1 cut(s) 1821
BlsI GCNGC 2 cut(s) 154, 881
Bme1390I CCNGG 7 cut(s) 567, 788, 1005, 1444, 1628, 1907, 1926
Bme18I GGWCC 2 cut(s) 1292, 1539
BmgBI CACGTC 1 cut(s) 304
BmgT120I GGNCC 2 cut(s) 1292, 1539
BmiI GGNNCC 1 cut(s) 1666
BmrFI CCNGG 7 cut(s) 567, 788, 1005, 1444, 1628, 1907, 1926
BmsI GCATC 2 cut(s) 812, 1620
BpiI GAAGAC 2 cut(s) 338, 371
BpmI CTGGAG 2 cut(s) 1683, 2083
Bpu10I CCTNAGC 1 cut(s) 1402
Bpu1102I GCTNAGC 1 cut(s) 1821
BpuEI CTTGAG 4 cut(s) 536, 794, 811, 1010
BpuMI CCSGG 2 cut(s) 1005, 1444
BsaI GGTCTC 1 cut(s) 338
BsaJI CCNNGG 1 cut(s) 565
BsaWI WCCGGW 3 cut(s) 499, 677, 692
BsaXI ACNNNNNCTCC 4 cut(s) 458, 488, 1986, 2016
Bsc4I CCNNNNNNNGG 2 cut(s) 499, 628
Bse118I RCCGGY 2 cut(s) 1725, 1910
Bse1I ACTGG 6 cut(s) 245, 847, 1147, 1294, 1591, 1666
Bse3DI GCAATG 1 cut(s) 1873
BseBI CCWGG 5 cut(s) 567, 788, 1628, 1907, 1926
BseDI CCNNGG 1 cut(s) 565
BseGI GGATG 3 cut(s) 172, 635, 928
BseLI CCNNNNNNNGG 2 cut(s) 499, 628
BseMI GCAATG 1 cut(s) 1873
BseMII CTCAG 7 cut(s) 692, 1227, 1357, 1416, 1487, 1812, 2039
BseNI ACTGG 6 cut(s) 245, 847, 1147, 1294, 1591, 1666
BseXI GCAGC 2 cut(s) 139, 891
BsgI GTGCAG 2 cut(s) 1675, 2010
BshFI GGCC 4 cut(s) 282, 300, 1910, 1914
BsiHKAI GWGCWC 2 cut(s) 1175, 1338
BsiSI CCGG 7 cut(s) 500, 678, 693, 1004, 1443, 1726, 1911
BslFI GGGAC 3 cut(s) 5, 1117, 1459
BslI CCNNNNNNNGG 2 cut(s) 499, 628
BsmAI GTCTC 3 cut(s) 338, 1193, 2023
BsmFI GGGAC 3 cut(s) 5, 1117, 1459
BsnI GGCC 4 cut(s) 282, 300, 1910, 1914
Bso31I GGTCTC 1 cut(s) 338
Bsp1286I GDGCHC 2 cut(s) 1175, 1338
Bsp143I GATC 5 cut(s) 79, 421, 820, 1339, 1492
Bsp1720I GCTNAGC 1 cut(s) 1821
BspANI GGCC 4 cut(s) 282, 300, 1910, 1914
BspCNI CTCAG 7 cut(s) 693, 1226, 1356, 1415, 1488, 1813, 2038
BspLI GGNNCC 1 cut(s) 1666
BspPI GGATC 1 cut(s) 828
BspQI GCTCTTC 1 cut(s) 1180
BspTI CTTAAG 1 cut(s) 1766
BspTNI GGTCTC 1 cut(s) 338
BsrDI GCAATG 1 cut(s) 1873
BsrFI RCCGGY 2 cut(s) 1725, 1910
BsrI ACTGG 6 cut(s) 245, 847, 1147, 1294, 1591, 1666
BssAI RCCGGY 2 cut(s) 1725, 1910
BssECI CCNNGG 1 cut(s) 565
BssMI GATC 5 cut(s) 79, 421, 820, 1339, 1492
Bst2UI CCWGG 5 cut(s) 567, 788, 1628, 1907, 1926
Bst4CI ACNGT 7 cut(s) 950, 1234, 1450, 1508, 1677, 1803, 1933
Bst6I CTCTTC 4 cut(s) 63, 501, 1180, 1361
BstAFI CTTAAG 1 cut(s) 1766
BstC8I GCNNGC 4 cut(s) 856, 1899, 1912, 1981
BstDEI CTNAG 7 cut(s) 701, 1213, 1343, 1402, 1496, 1821, 2025
BstF5I GGATG 3 cut(s) 172, 635, 928
BstH2I RGCGCY 1 cut(s) 1350
BstHHI GCGC 1 cut(s) 1349
BstKTI GATC 5 cut(s) 82, 424, 823, 1342, 1495
BstMAI GTCTC 3 cut(s) 338, 1193, 2023
BstMBI GATC 5 cut(s) 79, 421, 820, 1339, 1492
BstMWI GCNNNNNNNGC 7 cut(s) 187, 196, 288, 297, 1333, 1403, 1907
BstNI CCWGG 5 cut(s) 567, 788, 1628, 1907, 1926
BstNSI RCATGY 1 cut(s) 450
BstSCI CCNGG 7 cut(s) 565, 786, 1003, 1442, 1626, 1905, 1924
BstV1I GCAGC 2 cut(s) 139, 891
BstV2I GAAGAC 2 cut(s) 338, 371
BstX2I RGATCY 1 cut(s) 820
BstYI RGATCY 1 cut(s) 820
BsuRI GGCC 4 cut(s) 282, 300, 1910, 1914
BtrI CACGTC 1 cut(s) 304
BtsCI GGATG 3 cut(s) 172, 635, 928
BtsI GCAGTG 1 cut(s) 878
BtsIMutI CAGTG 7 cut(s) 840, 878, 965, 1287, 1383, 1584, 1799
Cac8I GCNNGC 4 cut(s) 856, 1899, 1912, 1981
CaiI CAGNNNCTG 4 cut(s) 388, 658, 1937, 2109
CfoI GCGC 1 cut(s) 1349
Cfr10I RCCGGY 2 cut(s) 1725, 1910
Cfr13I GGNCC 2 cut(s) 1292, 1539
Csp6I GTAC 5 cut(s) 391, 1271, 1320, 1974, 2018
CviAII CATG 3 cut(s) 224, 273, 447
CviQI GTAC 5 cut(s) 391, 1271, 1320, 1974, 2018
DdeI CTNAG 7 cut(s) 701, 1213, 1343, 1402, 1496, 1821, 2025
DpnI GATC 5 cut(s) 81, 423, 822, 1341, 1494
DpnII GATC 5 cut(s) 79, 421, 820, 1339, 1492
Eam1104I CTCTTC 4 cut(s) 63, 501, 1180, 1361
EarI CTCTTC 4 cut(s) 63, 501, 1180, 1361
Eco147I AGGCCT 1 cut(s) 282
Eco31I GGTCTC 1 cut(s) 338
Eco32I GATATC 1 cut(s) 1262
Eco47I GGWCC 2 cut(s) 1292, 1539
Eco47III AGCGCT 1 cut(s) 1348
EcoRII CCWGG 5 cut(s) 565, 786, 1626, 1905, 1924
EcoRV GATATC 1 cut(s) 1262
FaeI CATG 3 cut(s) 227, 276, 450
FaqI GGGAC 3 cut(s) 5, 1117, 1459
FatI CATG 3 cut(s) 223, 272, 446
Fnu4HI GCNGC 2 cut(s) 153, 880
FokI GGATG 3 cut(s) 179, 622, 935
FseI GGCCGGCC 1 cut(s) 1914
Fsp4HI GCNGC 2 cut(s) 153, 880
FspBI CTAG 8 cut(s) 615, 978, 1424, 1719, 1916, 2000, 2033, 2070
GlaI GCGC 1 cut(s) 1348
GluI GCNGC 2 cut(s) 153, 880
GsuI CTGGAG 2 cut(s) 1683, 2083
HaeII RGCGCY 1 cut(s) 1350
HaeIII GGCC 4 cut(s) 282, 300, 1910, 1914
HapII CCGG 7 cut(s) 500, 678, 693, 1004, 1443, 1726, 1911
HhaI GCGC 1 cut(s) 1349
Hin1II CATG 3 cut(s) 227, 276, 450
Hin6I GCGC 1 cut(s) 1347
HinP1I GCGC 1 cut(s) 1347
HincII GTYRAC 2 cut(s) 544, 645
HindII GTYRAC 2 cut(s) 544, 645
HindIII AAGCTT 4 cut(s) 179, 954, 1244, 1769
HpaII CCGG 7 cut(s) 500, 678, 693, 1004, 1443, 1726, 1911
HphI GGTGA 6 cut(s) 184, 301, 341, 1082, 1157, 1601
Hpy166II GTNNAC 3 cut(s) 544, 645, 2042
Hpy188III TCNNGA 6 cut(s) 164, 515, 615, 1027, 1112, 1215
Hpy8I GTNNAC 3 cut(s) 544, 645, 2042
HpyAV CCTTC 9 cut(s) 290, 362, 942, 1164, 1285, 1383, 1477, 1595, 1755
HpyCH4III ACNGT 7 cut(s) 950, 1234, 1450, 1508, 1677, 1803, 1933
HpyCH4IV ACGT 2 cut(s) 303, 887
HpyF10VI GCNNNNNNNGC 7 cut(s) 187, 196, 288, 297, 1333, 1403, 1907
HpyF3I CTNAG 7 cut(s) 701, 1213, 1343, 1402, 1496, 1821, 2025
HpySE526I ACGT 2 cut(s) 303, 887
Hsp92II CATG 3 cut(s) 227, 276, 450
HspAI GCGC 1 cut(s) 1347
KroI GCCGGC 1 cut(s) 1910
KroNI GCCGGC 1 cut(s) 1912
Kzo9I GATC 5 cut(s) 79, 421, 820, 1339, 1492
LguI GCTCTTC 1 cut(s) 1180
LmnI GCTCC 4 cut(s) 1114, 1402, 1664, 1942
Lsp1109I GCAGC 2 cut(s) 139, 891
LweI GCATC 2 cut(s) 812, 1620
MaeI CTAG 8 cut(s) 615, 978, 1424, 1719, 1916, 2000, 2033, 2070
MaeII ACGT 2 cut(s) 303, 887
MaeIII GTNAC 3 cut(s) 457, 680, 1710
MalI GATC 5 cut(s) 81, 423, 822, 1341, 1494
MboI GATC 5 cut(s) 79, 421, 820, 1339, 1492
MboII GAAGA 9 cut(s) 80, 100, 187, 246, 338, 371, 488, 1167, 1348
MfeI CAATTG 2 cut(s) 462, 1680
MflI RGATCY 1 cut(s) 820
MhlI GDGCHC 2 cut(s) 1175, 1338
MmeI TCCRAC 5 cut(s) 380, 459, 501, 1581, 2087
MroNI GCCGGC 1 cut(s) 1910
MroXI GAANNNNTTC 1 cut(s) 1933
MseI TTAA 1 cut(s) 1767
MslI CAYNNNNRTG 2 cut(s) 1697, 2084
MspA1I CMGCKG 2 cut(s) 152, 1820
MspCI CTTAAG 1 cut(s) 1766
MspI CCGG 7 cut(s) 500, 678, 693, 1004, 1443, 1726, 1911
MspR9I CCNGG 7 cut(s) 567, 788, 1005, 1444, 1628, 1907, 1926
MunI CAATTG 2 cut(s) 462, 1680
MvaI CCWGG 5 cut(s) 567, 788, 1628, 1907, 1926
MwoI GCNNNNNNNGC 7 cut(s) 187, 196, 288, 297, 1333, 1403, 1907
NaeI GCCGGC 1 cut(s) 1912
NciI CCSGG 2 cut(s) 1005, 1444
NdeII GATC 5 cut(s) 79, 421, 820, 1339, 1492
NgoMIV GCCGGC 1 cut(s) 1910
NlaIII CATG 3 cut(s) 227, 276, 450
NlaIV GGNNCC 1 cut(s) 1666
NmeAIII GCCGAG 1 cut(s) 1303
NmuCI GTSAC 1 cut(s) 1710
NspI RCATGY 1 cut(s) 450
PceI AGGCCT 1 cut(s) 282
PciI ACATGT 1 cut(s) 446
PciSI GCTCTTC 1 cut(s) 1180
PdiI GCCGGC 1 cut(s) 1912
PdmI GAANNNNTTC 1 cut(s) 1933
PfoI TCCNGGA 3 cut(s) 786, 1442, 1924
PkrI GCNGC 2 cut(s) 154, 881
PscI ACATGT 1 cut(s) 446
Psp6I CCWGG 5 cut(s) 565, 786, 1626, 1905, 1924
PspGI CCWGG 5 cut(s) 565, 786, 1626, 1905, 1924
PspN4I GGNNCC 1 cut(s) 1666
PspPI GGNCC 2 cut(s) 1292, 1539
PstNI CAGNNNCTG 4 cut(s) 388, 658, 1937, 2109
PsuI RGATCY 1 cut(s) 820
PvuII CAGCTG 2 cut(s) 152, 1820
RigI GGCCGGCC 1 cut(s) 1914
RsaI GTAC 5 cut(s) 392, 1272, 1321, 1975, 2019
RsaNI GTAC 5 cut(s) 391, 1271, 1320, 1974, 2018
RseI CAYNNNNRTG 2 cut(s) 1697, 2084
SapI GCTCTTC 1 cut(s) 1180
SaqAI TTAA 1 cut(s) 1767
SatI GCNGC 2 cut(s) 153, 880
Sau3AI GATC 5 cut(s) 79, 421, 820, 1339, 1492
Sau96I GGNCC 2 cut(s) 1292, 1539
ScrFI CCNGG 7 cut(s) 567, 788, 1005, 1444, 1628, 1907, 1926
SduI GDGCHC 2 cut(s) 1175, 1338
SfaNI GCATC 2 cut(s) 812, 1620
SinI GGWCC 2 cut(s) 1292, 1539
SmiMI CAYNNNNRTG 2 cut(s) 1697, 2084
SmlI CTYRAG 5 cut(s) 515, 809, 826, 1025, 1766
SmoI CTYRAG 5 cut(s) 515, 809, 826, 1025, 1766
SpeI ACTAGT 2 cut(s) 977, 1999
SseBI AGGCCT 1 cut(s) 282
SspMI CTAG 8 cut(s) 615, 978, 1424, 1719, 1916, 2000, 2033, 2070
StuI AGGCCT 1 cut(s) 282
StyD4I CCNGG 7 cut(s) 565, 786, 1003, 1442, 1626, 1905, 1924
TaaI ACNGT 7 cut(s) 950, 1234, 1450, 1508, 1677, 1803, 1933
TaiI ACGT 2 cut(s) 306, 890
TaqI TCGA 2 cut(s) 315, 1338
TaqII GACCGA 1 cut(s) 495
TatI WGTACW 1 cut(s) 390
Tru1I TTAA 1 cut(s) 1767
Tru9I TTAA 1 cut(s) 1767
TscAI CASTG 7 cut(s) 847, 878, 972, 1294, 1383, 1591, 1806
TseFI GTSAC 1 cut(s) 1710
TseI GCWGC 2 cut(s) 152, 879
Tsp45I GTSAC 1 cut(s) 1710
TspDTI ATGAA 6 cut(s) 81, 261, 396, 624, 738, 2042
TspRI CASTG 7 cut(s) 847, 878, 972, 1294, 1383, 1591, 1806
Vha464I CTTAAG 1 cut(s) 1766
VpaK11BI GGWCC 2 cut(s) 1292, 1539
XapI RAATTY 4 cut(s) 139, 1074, 1219, 2073
XbaI TCTAGA 1 cut(s) 614
XceI RCATGY 1 cut(s) 450
XcmI CCANNNNNNNNNTGG 1 cut(s) 784
XmnI GAANNNNTTC 1 cut(s) 1933
XspI CTAG 8 cut(s) 615, 978, 1424, 1719, 1916, 2000, 2033, 2070
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.