AT2G03410

MO25-like protein At2g03410

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0004058
Physical Location & Seq
Forward (+)
1033598 .. 1036009
2412 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G03410.1

Sequence Viewer

Length: 1047 bp
ATGAAAGGTCTCTTCAAGAACAAATCACGTCTTCCTGGTGAAATCGTACGTCAGACTCGAGATCTCATCGCTTTAGCGGAATCCGAAGAAGAAGAAACCGATGCGAGAAACTCGAAAAGGTTAGGGATTTGTGCGGAGTTGTGTCGAAACATTAGAGATTTGAAATCGATTCTTTATGGTAATGGTGAAGCTGAGCCTGTTCCTGAAGCTTGTCTTTTGTTAACTCAAGAGTTTTTCCGAGCAGACACGCTTCGTCCTTTGATCAAATCTATACCAAAACTTGACCTAGAAGCAAGAAAAGACGCGACACAGATTGTCGCGAATCTTCAGAAGCAACAAGTCGAATTTCGACTCGTTGCTTCTGAATATCTTGAATCGAACTTAGATGTTATCGATTCGTTAGTCGAAGGTATCGATCACGACCATGAGCTGGCGTTGCATTACACGGGAATGCTTAAAGAATGTGTGCGGCATCAGGTTGTTGCAAAGTACATACTCGAATCGAAGAATTTGGAGAAGTTTTTCGATTATGTTCAGCTTCCGTATTTCGATGTAGCTACCGATGCTAGCAAGATCTTCAGAGAGCTTTTGACGAGGCATAAATCGACTGTAGCGGAGTATCTTGCGAAGAACTACGAATGGTTTTTCGCAGAGTATAACACCAAGTTGTTGGAGAAAGGAAGCTATTTTACGAAGAGACAAGCGTCGAAATTGCTTGGAGATGTGTTGATGGATCGTTCGAATTCAGGTGTGATGGTAAAGTATGTGAGCAGTTTGGATAATTTGAGAATCATGATGAATCTTTTAAGAGAACCAACCAAGAACATTCAGTTAGAAGCATTTCATATCTTTAAACTCTTTGTGGCAAACGAGAACAAACCTGAGGATATCGTGGCGATTCTCGTGGCGAATCGGACCAAGATTCTTCGTTTGTTTGCTGATTTGAAACCTGAGAAAGAAGATGTAGGTTTTGAAACTGATAAAGCATTGGTTATGAATGAGATTGCTACACTTTCTCTTCTCGATATCAAAACCGCAGATCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko04150 ko04152 map04150 map04152
Pfam Domains
Protein Families
Mo25

Protein Analysis

348

Amino Acids

40.0

Weight (kDa)

5.85

Isoelectric Point (pI)

37.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mo25 PF08569 4 - 338 9.4e-117 Mo25-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 430
AccII CGCG 2 cut(s) 305, 320
AciI CCGC 5 cut(s) 77, 134, 469, 614, 1035
AclWI GGATC 1 cut(s) 741
AcsI RAATTY 3 cut(s) 344, 508, 742
AcuI CTGAAG 3 cut(s) 225, 311, 562
AfaI GTAC 2 cut(s) 48, 491
AfiI CCNNNNNNNGG 1 cut(s) 430
AgsI TTSAA 5 cut(s) 16, 163, 374, 946, 974
AjiI CACGTC 1 cut(s) 29
AjnI CCWGG 1 cut(s) 34
AluBI AGCT 7 cut(s) 191, 209, 430, 538, 557, 586, 684
AluI AGCT 7 cut(s) 191, 209, 430, 538, 557, 586, 684
Alw26I GTCTC 2 cut(s) 14, 691
AlwI GGATC 1 cut(s) 741
Ama87I CYCGRG 1 cut(s) 57
ApoI RAATTY 3 cut(s) 344, 508, 742
Asp700I GAANNNNTTC 2 cut(s) 521, 840
AspS9I GGNCC 1 cut(s) 915
AsuHPI GGTGA 2 cut(s) 50, 197
AsuII TTCGAA 1 cut(s) 740
AsuNHI GCTAGC 1 cut(s) 566
AvaI CYCGRG 1 cut(s) 57
AvaII GGWCC 1 cut(s) 915
AxyI CCTNAGG 1 cut(s) 882
BarI GAAGNNNNNNTAC 2 cut(s) 673, 705
BauI CACGAG 1 cut(s) 902
BbsI GAAGAC 1 cut(s) 23
BccI CCATC 2 cut(s) 724, 748
BciT130I CCWGG 1 cut(s) 36
BclI TGATCA 1 cut(s) 261
BcoDI GTCTC 2 cut(s) 14, 691
BfaI CTAG 2 cut(s) 287, 567
BfmI CTRYAG 1 cut(s) 609
BglII AGATCT 2 cut(s) 61, 573
BisI GCNGC 1 cut(s) 470
BlpI GCTNAGC 1 cut(s) 192
BlsI GCNGC 1 cut(s) 471
Bme1390I CCNGG 1 cut(s) 36
Bme18I GGWCC 1 cut(s) 915
BmeT110I CYCGRG 1 cut(s) 57
BmgBI CACGTC 1 cut(s) 29
BmgT120I GGNCC 1 cut(s) 915
BmrFI CCNGG 1 cut(s) 36
BmsI GCATC 3 cut(s) 91, 481, 553
BmtI GCTAGC 1 cut(s) 570
BoxI GACNNNNGTC 1 cut(s) 703
BpiI GAAGAC 1 cut(s) 23
Bpu1102I GCTNAGC 1 cut(s) 192
Bpu14I TTCGAA 1 cut(s) 740
BpuEI CTTGAG 1 cut(s) 210
Bsa29I ATCGAT 4 cut(s) 167, 393, 414, 1042
BsaI GGTCTC 1 cut(s) 14
Bsc4I CCNNNNNNNGG 1 cut(s) 430
Bse21I CCTNAGG 1 cut(s) 882
BseBI CCWGG 1 cut(s) 36
BseCI ATCGAT 4 cut(s) 167, 393, 414, 1042
BseLI CCNNNNNNNGG 1 cut(s) 430
BseMII CTCAG 3 cut(s) 183, 873, 942
Bsh1236I CGCG 2 cut(s) 305, 320
BshVI ATCGAT 4 cut(s) 167, 393, 414, 1042
BsiHKCI CYCGRG 1 cut(s) 57
BsiWI CGTACG 1 cut(s) 46
BslI CCNNNNNNNGG 1 cut(s) 430
BsmAI GTCTC 2 cut(s) 14, 691
BsmI GAATGC 1 cut(s) 456
Bso31I GGTCTC 1 cut(s) 14
BsoBI CYCGRG 1 cut(s) 57
Bsp119I TTCGAA 1 cut(s) 740
Bsp143I GATC 6 cut(s) 61, 261, 415, 573, 733, 1039
Bsp1720I GCTNAGC 1 cut(s) 192
Bsp68I TCGCGA 1 cut(s) 320
BspACI CCGC 5 cut(s) 77, 134, 469, 614, 1035
BspCNI CTCAG 3 cut(s) 184, 874, 943
BspDI ATCGAT 4 cut(s) 167, 393, 414, 1042
BspFNI CGCG 2 cut(s) 305, 320
BspHI TCATGA 1 cut(s) 792
BspOI GCTAGC 1 cut(s) 570
BspPI GGATC 1 cut(s) 741
BspT104I TTCGAA 1 cut(s) 740
BspTNI GGTCTC 1 cut(s) 14
BssMI GATC 6 cut(s) 61, 261, 415, 573, 733, 1039
BssSI CACGAG 1 cut(s) 902
Bst2BI CACGAG 1 cut(s) 902
Bst2UI CCWGG 1 cut(s) 36
Bst4CI ACNGT 1 cut(s) 610
Bst6I CTCTTC 3 cut(s) 17, 689, 1023
BstBI TTCGAA 1 cut(s) 740
BstC8I GCNNGC 2 cut(s) 432, 568
BstDEI CTNAG 4 cut(s) 192, 382, 882, 951
BstFNI CGCG 2 cut(s) 305, 320
BstKTI GATC 6 cut(s) 64, 264, 418, 576, 736, 1042
BstMAI GTCTC 2 cut(s) 14, 691
BstMBI GATC 6 cut(s) 61, 261, 415, 573, 733, 1039
BstMWI GCNNNNNNNGC 2 cut(s) 436, 563
BstNI CCWGG 1 cut(s) 36
BstPAI GACNNNNGTC 1 cut(s) 703
BstSCI CCNGG 1 cut(s) 34
BstSFI CTRYAG 1 cut(s) 609
BstUI CGCG 2 cut(s) 305, 320
BstV2I GAAGAC 1 cut(s) 23
BstX2I RGATCY 2 cut(s) 61, 573
BstXI CCANNNNNNTGG 1 cut(s) 670
BstYI RGATCY 2 cut(s) 61, 573
Bsu15I ATCGAT 4 cut(s) 167, 393, 414, 1042
Bsu36I CCTNAGG 1 cut(s) 882
BsuTUI ATCGAT 4 cut(s) 167, 393, 414, 1042
BtgZI GCGATG 1 cut(s) 52
BtrI CACGTC 1 cut(s) 29
BtuMI TCGCGA 1 cut(s) 320
Cac8I GCNNGC 2 cut(s) 432, 568
CciI TCATGA 1 cut(s) 792
Cfr13I GGNCC 1 cut(s) 915
ClaI ATCGAT 4 cut(s) 167, 393, 414, 1042
CseI GACGC 2 cut(s) 311, 693
Csp6I GTAC 2 cut(s) 47, 490
CviAII CATG 2 cut(s) 425, 793
CviJI RGCY 8 cut(s) 191, 196, 209, 430, 538, 557, 586, 684
CviKI_1 RGCY 8 cut(s) 191, 196, 209, 430, 538, 557, 586, 684
CviQI GTAC 2 cut(s) 47, 490
DdeI CTNAG 4 cut(s) 192, 382, 882, 951
DpnI GATC 6 cut(s) 63, 263, 417, 575, 735, 1041
DpnII GATC 6 cut(s) 61, 261, 415, 573, 733, 1039
DraI TTTAAA 1 cut(s) 853
Eam1104I CTCTTC 3 cut(s) 17, 689, 1023
EarI CTCTTC 3 cut(s) 17, 689, 1023
Eco31I GGTCTC 1 cut(s) 14
Eco32I GATATC 2 cut(s) 889, 1027
Eco47I GGWCC 1 cut(s) 915
Eco57I CTGAAG 3 cut(s) 225, 311, 562
Eco81I CCTNAGG 1 cut(s) 882
Eco88I CYCGRG 1 cut(s) 57
EcoRI GAATTC 1 cut(s) 742
EcoRII CCWGG 1 cut(s) 34
EcoRV GATATC 2 cut(s) 889, 1027
FaeI CATG 2 cut(s) 428, 796
FalI AAGNNNNNCTT 2 cut(s) 198, 230
FatI CATG 2 cut(s) 424, 792
FbaI TGATCA 1 cut(s) 261
Fnu4HI GCNGC 1 cut(s) 470
Fsp4HI GCNGC 1 cut(s) 470
FspBI CTAG 2 cut(s) 287, 567
GluI GCNGC 1 cut(s) 470
HgaI GACGC 2 cut(s) 311, 693
Hin1II CATG 2 cut(s) 428, 796
HincII GTYRAC 1 cut(s) 222
HindII GTYRAC 1 cut(s) 222
HindIII AAGCTT 1 cut(s) 207
HpaI GTTAAC 1 cut(s) 222
HphI GGTGA 2 cut(s) 50, 197
Hpy166II GTNNAC 1 cut(s) 222
Hpy188I TCNGA 7 cut(s) 54, 85, 239, 330, 364, 581, 915
Hpy188III TCNNGA 9 cut(s) 16, 59, 203, 227, 319, 371, 419, 793, 1022
Hpy8I GTNNAC 1 cut(s) 222
Hpy99I CGWCG 1 cut(s) 709
HpyAV CCTTC 1 cut(s) 401
HpyCH4III ACNGT 1 cut(s) 610
HpyCH4IV ACGT 2 cut(s) 28, 49
HpyCH4V TGCA 2 cut(s) 439, 485
HpyF10VI GCNNNNNNNGC 2 cut(s) 436, 563
HpyF3I CTNAG 4 cut(s) 192, 382, 882, 951
HpySE526I ACGT 2 cut(s) 28, 49
Hsp92II CATG 2 cut(s) 428, 796
Ksp22I TGATCA 1 cut(s) 261
KspAI GTTAAC 1 cut(s) 222
Kzo9I GATC 6 cut(s) 61, 261, 415, 573, 733, 1039
LpnPI CCDG 9 cut(s) 21, 48, 210, 216, 416, 461, 732, 894, 963
LweI GCATC 3 cut(s) 91, 481, 553
MaeI CTAG 2 cut(s) 287, 567
MaeII ACGT 2 cut(s) 28, 49
MalI GATC 6 cut(s) 63, 263, 417, 575, 735, 1041
MboI GATC 6 cut(s) 61, 261, 415, 573, 733, 1039
MflI RGATCY 2 cut(s) 61, 573
MluCI AATT 5 cut(s) 344, 508, 710, 742, 781
MlyI GAGTC 2 cut(s) 49, 345
MmeI TCCRAC 1 cut(s) 651
MnlI CCTC 2 cut(s) 588, 877
MroXI GAANNNNTTC 2 cut(s) 521, 840
MseI TTAA 4 cut(s) 221, 456, 806, 852
MslI CAYNNNNRTG 2 cut(s) 423, 449
MspR9I CCNGG 1 cut(s) 36
Mva1269I GAATGC 1 cut(s) 456
MvaI CCWGG 1 cut(s) 36
MvnI CGCG 2 cut(s) 305, 320
MwoI GCNNNNNNNGC 2 cut(s) 436, 563
NdeII GATC 6 cut(s) 61, 261, 415, 573, 733, 1039
NheI GCTAGC 1 cut(s) 566
NlaIII CATG 2 cut(s) 428, 796
NruI TCGCGA 1 cut(s) 320
NspV TTCGAA 1 cut(s) 740
PaeR7I CTCGAG 1 cut(s) 57
PagI TCATGA 1 cut(s) 792
PcsI WCGNNNNNNNCGW 2 cut(s) 55, 411
PctI GAATGC 1 cut(s) 456
PdmI GAANNNNTTC 2 cut(s) 521, 840
Pfl23II CGTACG 1 cut(s) 46
PflMI CCANNNNNTGG 1 cut(s) 430
PkrI GCNGC 1 cut(s) 471
PleI GAGTC 2 cut(s) 49, 345
PpsI GAGTC 2 cut(s) 49, 345
PshAI GACNNNNGTC 1 cut(s) 703
Psp6I CCWGG 1 cut(s) 34
PspGI CCWGG 1 cut(s) 34
PspLI CGTACG 1 cut(s) 46
PspPI GGNCC 1 cut(s) 915
PsuI RGATCY 2 cut(s) 61, 573
RruI TCGCGA 1 cut(s) 320
RsaI GTAC 2 cut(s) 48, 491
RsaNI GTAC 2 cut(s) 47, 490
RseI CAYNNNNRTG 2 cut(s) 423, 449
SaqAI TTAA 4 cut(s) 221, 456, 806, 852
SatI GCNGC 1 cut(s) 470
Sau3AI GATC 6 cut(s) 61, 261, 415, 573, 733, 1039
Sau96I GGNCC 1 cut(s) 915
SchI GAGTC 2 cut(s) 49, 345
ScrFI CCNGG 1 cut(s) 36
SfaNI GCATC 3 cut(s) 91, 481, 553
SfcI CTRYAG 1 cut(s) 609
Sfr274I CTCGAG 1 cut(s) 57
SfuI TTCGAA 1 cut(s) 740
SinI GGWCC 1 cut(s) 915
SlaI CTCGAG 1 cut(s) 57
SmiMI CAYNNNNRTG 2 cut(s) 423, 449
SmlI CTYRAG 2 cut(s) 57, 225
SmoI CTYRAG 2 cut(s) 57, 225
Sse9I AATT 5 cut(s) 344, 508, 710, 742, 781
SsiI CCGC 5 cut(s) 77, 134, 469, 614, 1035
SspMI CTAG 2 cut(s) 287, 567
StyD4I CCNGG 1 cut(s) 34
TaaI ACNGT 1 cut(s) 610
TaiI ACGT 2 cut(s) 31, 52
TasI AATT 5 cut(s) 344, 508, 710, 742, 781
TatI WGTACW 1 cut(s) 489
TauI GCSGC 1 cut(s) 472
Tru1I TTAA 4 cut(s) 221, 456, 806, 852
Tru9I TTAA 4 cut(s) 221, 456, 806, 852
TspDTI ATGAA 4 cut(s) 17, 812, 833, 1010
TspGWI ACGGA 1 cut(s) 531
Van91I CCANNNNNTGG 1 cut(s) 430
VpaK11BI GGWCC 1 cut(s) 915
XapI RAATTY 3 cut(s) 344, 508, 742
XhoI CTCGAG 1 cut(s) 57
XmnI GAANNNNTTC 2 cut(s) 521, 840
XspI CTAG 2 cut(s) 287, 567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.