RLG00000030916

MO25-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0004058
Physical Location & Seq
Reverse (-)
617487 .. 621641
4155 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030916

Sequence Viewer

Length: 1194 bp
ATGATGAAGTGGATTAAGAAGATTGCGGAGGAGGGCATAGAGAGCGGACATCGGAGAGCCTCGAAGCCTGTGACGGGGCTCTCTTCTCCATCGCCGCCGCAGCAGCATCATCTATCTCAACAGCTACGGCGCAGCCTCAGTAAGAGCAGCAGCATCAGCCAGAGCCAGAGAATGAAGGGTCTGTTCAAGTCTAAGCCCCGCACGCCGGCCGACGTCGTCCGCCAGACCCGCGATCTCCTCATCTATGCTCAGCGCAGCCCCGATTCCCGCGAGAGCAAGCGTGAGGAAAAGATGGCAGAGCTTTGTAAAAACATTAGGGAGTTGAAGAGCATTCTCTATGGCAATAGTGAGTCAGAGCCTGTTTCTGAAGCTTGTGCGCAATTGACACAGGAGTTTTTCAGGGAGGACACGCTTCGACTTCTAATCATGTGTGTTCCGAAATTAAACTTGGAGGCAAGGAAAGATGCCACTCAAGTTGTTGCCAATCTACAAAGGCAACAGGTTCACTCCAAGTTGATTGCATCCGATTACTTGGAAGCAAACATTGATATAATGGATGTTTTGATCCAAGGGTACGGAGATACAGATATGGCTTTACATTATGGTGCAATGCTGAGAGAGTGCATACGCCACCAAAGCGTTGCACGATATGTTTTGGAATCTCAACACATGAAGAAGTTCTTTGACTATATACAGCTTCCAAATTTCGATATTGCTGCAGATGCTGCTGCGACTTTTAAGGAACTCATGACAAGGCATAAATCTACGGTAGCTGATTTTTTATCCAAGAATTATGACTGGTTCTTTGCGGAGTATAACTCAAAGCTGCTGGAATCCTCCAATTACATTACCAGACGACAAGCTGTCAAGCTGTTAGGAGATATATTGCTGGATCGGTCAAATTCAGCTGTAATGACTCGATATGTGAGCTCAAGAGAGAATTTGAGGATCCTTATGAATCTTCTCAGAGAGTCAAGCAAGAGCATCCAGATCGAAGCATTTCATGTTTTTAAGCTATTTGCTGCCAACCAAAATAAACCTGCCGACATTGTGGGCATTCTTGTTGCAAATAGAAGCAAACTTCTACGGCTGTTTGCTGATTTTAAAATTGATAAAGAGGATGAACAATTTGAGGCAGACAAAGCTCAAGTAGTAAGAGAGATTGCTGCCTTGGAACCGAAAGAACTCTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko04150 ko04152 map04150 map04152
Pfam Domains
Protein Families
Mo25

Protein Analysis

398

Amino Acids

45.55

Weight (kDa)

9.19

Isoelectric Point (pI)

54.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mo25 PF08569 61 - 392 1.1e-133 Mo25-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 216
Acc16I TGCGCA 1 cut(s) 378
Acc36I ACCTGC 1 cut(s) 1048
AccBSI CCGCTC 1 cut(s) 45
AccII CGCG 2 cut(s) 231, 270
AciI CCGC 9 cut(s) 26, 45, 95, 98, 199, 220, 229, 268, 809
AclWI GGATC 4 cut(s) 559, 900, 943, 956
AcoI YGGCCR 1 cut(s) 207
AcsI RAATTY 3 cut(s) 703, 901, 940
AcuI CTGAAG 1 cut(s) 387
AcyI GRCGYC 1 cut(s) 213
AfaI GTAC 1 cut(s) 575
AfiI CCNNNNNNNGG 2 cut(s) 74, 205
AgsI TTSAA 2 cut(s) 187, 325
AhdI GACNNNNNGTC 1 cut(s) 863
AjuI GAANNNNNNNTTGG 2 cut(s) 431, 463
Alw21I GWGCWC 1 cut(s) 932
AlwI GGATC 4 cut(s) 559, 900, 943, 956
AlwNI CAGNNNCTG 2 cut(s) 359, 725
AoxI GGCC 1 cut(s) 207
ApoI RAATTY 3 cut(s) 703, 901, 940
ArsI GACNNNNNNTTYG 2 cut(s) 788, 820
Asp700I GAANNNNTTC 2 cut(s) 677, 999
AspLEI GCGC 3 cut(s) 132, 255, 379
BamHI GGATCC 1 cut(s) 948
BanII GRGCYC 2 cut(s) 81, 932
Bbv12I GWGCWC 1 cut(s) 932
BccI CCATC 2 cut(s) 97, 286
BceAI ACGGC 2 cut(s) 143, 1103
BcgI CGANNNNNNTGC 4 cut(s) 698, 732, 973, 1007
BfmI CTRYAG 1 cut(s) 717
BfuAI ACCTGC 1 cut(s) 1048
BlpI GCTNAGC 1 cut(s) 249
BmeRI GACNNNNNGTC 1 cut(s) 863
BmiI GGNNCC 2 cut(s) 950, 1176
BmsI GCATC 6 cut(s) 115, 162, 454, 530, 712, 993
BplI GAGNNNNNCTC 2 cut(s) 803, 835
Bpu1102I GCTNAGC 1 cut(s) 249
BpuEI CTTGAG 3 cut(s) 456, 916, 1131
BsaHI GRCGYC 1 cut(s) 213
BsaJI CCNNGG 2 cut(s) 568, 1170
Bsc4I CCNNNNNNNGG 2 cut(s) 74, 205
Bse118I RCCGGY 1 cut(s) 205
Bse1I ACTGG 1 cut(s) 803
Bse3DI GCAATG 1 cut(s) 615
BseDI CCNNGG 2 cut(s) 568, 1170
BseGI GGATG 4 cut(s) 521, 562, 984, 1126
BseLI CCNNNNNNNGG 2 cut(s) 74, 205
BseMI GCAATG 1 cut(s) 615
BseMII CTCAG 4 cut(s) 151, 263, 605, 979
BseNI ACTGG 1 cut(s) 803
BseRI GAGGAG 2 cut(s) 44, 227
BseX3I CGGCCG 1 cut(s) 207
Bsh1236I CGCG 2 cut(s) 231, 270
Bsh1285I CGRYCG 1 cut(s) 210
BshFI GGCC 1 cut(s) 209
BsiEI CGRYCG 1 cut(s) 210
BsiHKAI GWGCWC 1 cut(s) 932
BsiSI CCGG 1 cut(s) 206
BslI CCNNNNNNNGG 2 cut(s) 74, 205
BsmI GAATGC 2 cut(s) 330, 1056
BsnI GGCC 1 cut(s) 209
Bsp1286I GDGCHC 2 cut(s) 81, 932
Bsp143I GATC 5 cut(s) 232, 564, 892, 948, 990
Bsp1720I GCTNAGC 1 cut(s) 249
BspACI CCGC 9 cut(s) 26, 45, 95, 98, 199, 220, 229, 268, 809
BspANI GGCC 1 cut(s) 209
BspCNI CTCAG 4 cut(s) 150, 262, 606, 978
BspFNI CGCG 2 cut(s) 231, 270
BspHI TCATGA 2 cut(s) 747, 1190
BspLI GGNNCC 2 cut(s) 950, 1176
BspMAI CTGCAG 1 cut(s) 721
BspMI ACCTGC 1 cut(s) 1048
BspPI GGATC 4 cut(s) 559, 900, 943, 956
BspQI GCTCTTC 1 cut(s) 320
BsrBI CCGCTC 1 cut(s) 45
BsrDI GCAATG 1 cut(s) 615
BsrFI RCCGGY 1 cut(s) 205
BsrI ACTGG 1 cut(s) 803
BssAI RCCGGY 1 cut(s) 205
BssECI CCNNGG 2 cut(s) 568, 1170
BssMI GATC 5 cut(s) 232, 564, 892, 948, 990
BssNI GRCGYC 1 cut(s) 213
BssT1I CCWWGG 2 cut(s) 568, 1170
Bst4CI ACNGT 1 cut(s) 769
Bst6I CTCTTC 2 cut(s) 88, 320
BstACI GRCGYC 1 cut(s) 213
BstAPI GCANNNNNTGC 1 cut(s) 725
BstC8I GCNNGC 3 cut(s) 203, 207, 278
BstDEI CTNAG 5 cut(s) 137, 192, 249, 614, 965
BstF5I GGATG 4 cut(s) 521, 562, 984, 1126
BstFNI CGCG 2 cut(s) 231, 270
BstHHI GCGC 3 cut(s) 132, 255, 379
BstKTI GATC 5 cut(s) 235, 567, 895, 951, 993
BstMBI GATC 5 cut(s) 232, 564, 892, 948, 990
BstMCI CGRYCG 1 cut(s) 210
BstSFI CTRYAG 1 cut(s) 717
BstUI CGCG 2 cut(s) 231, 270
BstX2I RGATCY 1 cut(s) 948
BstYI RGATCY 1 cut(s) 948
BstZI CGGCCG 1 cut(s) 207
BsuRI GGCC 1 cut(s) 209
BtgZI GCGATG 1 cut(s) 75
BtsCI GGATG 4 cut(s) 521, 562, 984, 1126
BveI ACCTGC 1 cut(s) 1048
Cac8I GCNNGC 3 cut(s) 203, 207, 278
CaiI CAGNNNCTG 2 cut(s) 359, 725
CciI TCATGA 2 cut(s) 747, 1190
CfoI GCGC 3 cut(s) 132, 255, 379
Cfr10I RCCGGY 1 cut(s) 205
Csp6I GTAC 1 cut(s) 574
CspCI CAANNNNNGTGG 2 cut(s) 457, 492
CviAII CATG 5 cut(s) 427, 670, 748, 1004, 1191
CviQI GTAC 1 cut(s) 574
DdeI CTNAG 5 cut(s) 137, 192, 249, 614, 965
DpnI GATC 5 cut(s) 234, 566, 894, 950, 992
DpnII GATC 5 cut(s) 232, 564, 892, 948, 990
DraI TTTAAA 1 cut(s) 1105
DriI GACNNNNNGTC 1 cut(s) 863
EaeI YGGCCR 1 cut(s) 207
EagI CGGCCG 1 cut(s) 207
Eam1104I CTCTTC 2 cut(s) 88, 320
Eam1105I GACNNNNNGTC 1 cut(s) 863
EarI CTCTTC 2 cut(s) 88, 320
EciI GGCGGA 1 cut(s) 209
Ecl136II GAGCTC 1 cut(s) 930
EclXI CGGCCG 1 cut(s) 207
Eco130I CCWWGG 2 cut(s) 568, 1170
Eco24I GRGCYC 2 cut(s) 81, 932
Eco52I CGGCCG 1 cut(s) 207
Eco53kI GAGCTC 1 cut(s) 930
Eco57I CTGAAG 1 cut(s) 387
EcoICRI GAGCTC 1 cut(s) 930
EcoT14I CCWWGG 2 cut(s) 568, 1170
EcoT38I GRGCYC 2 cut(s) 81, 932
ErhI CCWWGG 2 cut(s) 568, 1170
FaeI CATG 5 cut(s) 430, 673, 751, 1007, 1194
FalI AAGNNNNNCTT 2 cut(s) 665, 697
FatI CATG 5 cut(s) 426, 669, 747, 1003, 1190
FauI CCCGC 3 cut(s) 206, 236, 275
FokI GGATG 4 cut(s) 508, 569, 971, 1133
FriOI GRGCYC 2 cut(s) 81, 932
FspI TGCGCA 1 cut(s) 378
GlaI GCGC 3 cut(s) 131, 254, 378
HaeIII GGCC 1 cut(s) 209
HapII CCGG 1 cut(s) 206
HhaI GCGC 3 cut(s) 132, 255, 379
Hin1I GRCGYC 1 cut(s) 213
Hin1II CATG 5 cut(s) 430, 673, 751, 1007, 1194
Hin6I GCGC 3 cut(s) 130, 253, 377
HinP1I GCGC 3 cut(s) 130, 253, 377
HindIII AAGCTT 1 cut(s) 369
HinfI GANTC 7 cut(s) 263, 350, 659, 833, 916, 958, 971
HpaII CCGG 1 cut(s) 206
Hpy166II GTNNAC 1 cut(s) 505
Hpy188I TCNGA 6 cut(s) 54, 355, 367, 438, 526, 968
Hpy188III TCNNGA 4 cut(s) 748, 933, 988, 1191
Hpy8I GTNNAC 1 cut(s) 505
Hpy99I CGWCG 2 cut(s) 215, 218
HpyAV CCTTC 1 cut(s) 169
HpyCH4III ACNGT 1 cut(s) 769
HpyCH4IV ACGT 1 cut(s) 213
HpyCH4V TGCA 6 cut(s) 521, 608, 624, 644, 719, 1067
HpyF3I CTNAG 5 cut(s) 137, 192, 249, 614, 965
HpySE526I ACGT 1 cut(s) 213
Hsp92I GRCGYC 1 cut(s) 213
Hsp92II CATG 5 cut(s) 430, 673, 751, 1007, 1194
HspAI GCGC 3 cut(s) 130, 253, 377
KroI GCCGGC 1 cut(s) 205
KroNI GCCGGC 1 cut(s) 207
Kzo9I GATC 5 cut(s) 232, 564, 892, 948, 990
LguI GCTCTTC 1 cut(s) 320
LweI GCATC 6 cut(s) 115, 162, 454, 530, 712, 993
MaeII ACGT 1 cut(s) 213
MaeIII GTNAC 1 cut(s) 70
MalI GATC 5 cut(s) 234, 566, 894, 950, 992
MbiI CCGCTC 1 cut(s) 45
MboI GATC 5 cut(s) 232, 564, 892, 948, 990
MboII GAAGA 5 cut(s) 31, 75, 337, 685, 953
MfeI CAATTG 1 cut(s) 380
MflI RGATCY 1 cut(s) 948
MhlI GDGCHC 2 cut(s) 81, 932
MluCI AATT 9 cut(s) 380, 440, 703, 790, 841, 901, 940, 1107, 1127
MlyI GAGTC 3 cut(s) 359, 910, 980
MroNI GCCGGC 1 cut(s) 205
MroXI GAANNNNTTC 2 cut(s) 677, 999
MseI TTAA 5 cut(s) 15, 443, 738, 1011, 1104
MslI CAYNNNNRTG 1 cut(s) 603
MspA1I CMGCKG 1 cut(s) 908
MspI CCGG 1 cut(s) 206
MunI CAATTG 1 cut(s) 380
Mva1269I GAATGC 2 cut(s) 330, 1056
MvnI CGCG 2 cut(s) 231, 270
NaeI GCCGGC 1 cut(s) 207
NdeII GATC 5 cut(s) 232, 564, 892, 948, 990
NgoMIV GCCGGC 1 cut(s) 205
NlaIII CATG 5 cut(s) 430, 673, 751, 1007, 1194
NlaIV GGNNCC 2 cut(s) 950, 1176
NmuCI GTSAC 1 cut(s) 70
NsbI TGCGCA 1 cut(s) 378
PagI TCATGA 2 cut(s) 747, 1190
PciSI GCTCTTC 1 cut(s) 320
PctI GAATGC 2 cut(s) 330, 1056
PdiI GCCGGC 1 cut(s) 207
PdmI GAANNNNTTC 2 cut(s) 677, 999
PfeI GAWTC 4 cut(s) 263, 659, 833, 958
PflFI GACNNNGTC 1 cut(s) 215
PleI GAGTC 3 cut(s) 358, 910, 979
PpsI GAGTC 3 cut(s) 358, 910, 979
Psp124BI GAGCTC 1 cut(s) 932
PspN4I GGNNCC 2 cut(s) 950, 1176
PstI CTGCAG 1 cut(s) 721
PstNI CAGNNNCTG 2 cut(s) 359, 725
PsuI RGATCY 1 cut(s) 948
PsyI GACNNNGTC 1 cut(s) 215
PvuII CAGCTG 1 cut(s) 908
RsaI GTAC 1 cut(s) 575
RsaNI GTAC 1 cut(s) 574
RseI CAYNNNNRTG 1 cut(s) 603
SacI GAGCTC 1 cut(s) 932
SapI GCTCTTC 1 cut(s) 320
SaqAI TTAA 5 cut(s) 15, 443, 738, 1011, 1104
Sau3AI GATC 5 cut(s) 232, 564, 892, 948, 990
SchI GAGTC 3 cut(s) 359, 910, 980
SduI GDGCHC 2 cut(s) 81, 932
SfaNI GCATC 6 cut(s) 115, 162, 454, 530, 712, 993
SfcI CTRYAG 1 cut(s) 717
SmiMI CAYNNNNRTG 1 cut(s) 603
SmlI CTYRAG 3 cut(s) 471, 931, 1146
SmoI CTYRAG 3 cut(s) 471, 931, 1146
Sse9I AATT 9 cut(s) 380, 440, 703, 790, 841, 901, 940, 1107, 1127
SsiI CCGC 9 cut(s) 26, 45, 95, 98, 199, 220, 229, 268, 809
SstI GAGCTC 1 cut(s) 932
StyI CCWWGG 2 cut(s) 568, 1170
TaaI ACNGT 1 cut(s) 769
TaiI ACGT 1 cut(s) 216
TaqI TCGA 5 cut(s) 62, 415, 708, 919, 993
TaqII GACCGA 1 cut(s) 885
TasI AATT 9 cut(s) 380, 440, 703, 790, 841, 901, 940, 1107, 1127
TauI GCSGC 2 cut(s) 97, 100
TfiI GAWTC 4 cut(s) 263, 659, 833, 958
Tru1I TTAA 5 cut(s) 15, 443, 738, 1011, 1104
Tru9I TTAA 5 cut(s) 15, 443, 738, 1011, 1104
TseFI GTSAC 1 cut(s) 70
Tsp45I GTSAC 1 cut(s) 70
TspDTI ATGAA 6 cut(s) 20, 188, 686, 971, 992, 1137
TspGWI ACGGA 1 cut(s) 591
Tth111I GACNNNGTC 1 cut(s) 215
XapI RAATTY 3 cut(s) 703, 901, 940
XmnI GAANNNNTTC 2 cut(s) 677, 999
ZraI GACGTC 1 cut(s) 214
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.