FvH4_3g00790

MO25-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0004058
Physical Location & Seq
Reverse (-)
397588 .. 400957
3370 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g00790.t1

Sequence Viewer

Length: 1020 bp
ATGAAGGGTCTCTTCAAGTCTAAGCCCCGCACGCCGGCCGACGTGGTGCGCCAAACCCGCGATCTCCTCATCTATGCGCAGCGTGGCGGTACCGATTCCCGCGAGAGCAAGCGTGAGGAAAAGATGGCAGAGCTGTCTAAAAACATTAGGGAGTTGAAGTGCATTCTGTATGGGAACAGTGAGTCGGAGCCTGTTTCGGAAGCTTGTGCGCAATTGACGCAGGAGTTTTTCAGGGAGGACACGCTCCGTCTTCTGATTACGTGTCTTCCGAAACTGAACTTGGAGGCAAGGAAAGATGCCACTCAAGTTGTTGCCAATCTACAGAGGCAACAGGTTCACTCCAAGTTGATTGCATCCGATTACTTGGAAGCAAACATTGATCTAATGGATGTTTTGATCCAAGGGTATGGAGACACAGACATGGCTTTACATTATGGTGCAATGCTGAGAGAGTGCATACGCCACCAAAGTGTTGCTAGATATGTTTTGGAATCTCAACACATGAAGAAGTTCTTTGACTACATACAGCTTCCAAATTTCGATATTGCAGCAGATGCTGCTGCAACTTTTAAGGAACTCATGACAAGGCATAAATCTACAGTAGCAGATTTTTTATCCAAGAATTATGACTGGTTCTTTGCGGAGTATAACTCAAAGCTGTTGGAATCCACCAATTACATTACCAGACGACAAGCTGTCAAGCTGTTAGGAGATATTTTGCTGGATCGTTCGAACTCAGCTGTAATGACTCGATATGTGAGCTCAAGAGACAATTTGAGGATCCTTATGAATCTTCTCAGAGAGTCAAGCAAGAGCATCCAGATCGAAGCATTTCATGTTTTTAAGCTATTTGCTGCTAACCAAAATAAACCTGCTGACATTGTGGGCATACTTGTTGCAAATAGAAGCAAACTTCTACGGCTGTTTGCTGATTTTAAAATTGATAAAGAGGATGAACAATTTGAGGCAGACAAAGCTCAAGTAGTAAGAGAGATTGCTGCCTTGGAACCAAAAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko04150 ko04152 map04150 map04152
Pfam Domains
Protein Families
Mo25

Protein Analysis

340

Amino Acids

38.99

Weight (kDa)

8.2

Isoelectric Point (pI)

41.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mo25 PF08569 4 - 336 3.2e-134 Mo25-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 78, 210
Acc36I ACCTGC 1 cut(s) 880
Acc65I GGTACC 1 cut(s) 89
AccB1I GGYRCC 1 cut(s) 89
AccII CGCG 2 cut(s) 60, 102
AciI CCGC 5 cut(s) 28, 58, 87, 100, 641
AclWI GGATC 4 cut(s) 391, 732, 775, 788
AcoI YGGCCR 1 cut(s) 36
AcsI RAATTY 1 cut(s) 535
AfaI GTAC 1 cut(s) 91
AfiI CCNNNNNNNGG 1 cut(s) 34
AflIII ACRYGT 1 cut(s) 260
AgsI TTSAA 2 cut(s) 16, 157
AhdI GACNNNNNGTC 1 cut(s) 695
AjiI CACGTC 1 cut(s) 43
AjuI GAANNNNNNNTTGG 2 cut(s) 263, 295
AleI CACNNNNGTG 1 cut(s) 468
Alw21I GWGCWC 1 cut(s) 764
Alw26I GTCTC 3 cut(s) 14, 405, 762
AlwI GGATC 4 cut(s) 391, 732, 775, 788
AlwNI CAGNNNCTG 1 cut(s) 557
AoxI GGCC 1 cut(s) 36
ApeKI GCWGC 6 cut(s) 79, 548, 557, 560, 854, 998
ApoI RAATTY 1 cut(s) 535
ArsI GACNNNNNNTTYG 2 cut(s) 620, 652
Asp700I GAANNNNTTC 2 cut(s) 509, 831
Asp718I GGTACC 1 cut(s) 89
AspLEI GCGC 3 cut(s) 51, 79, 211
AsuII TTCGAA 1 cut(s) 731
BamHI GGATCC 1 cut(s) 780
BanI GGYRCC 1 cut(s) 89
BanII GRGCYC 1 cut(s) 764
BbsI GAAGAC 2 cut(s) 242, 257
Bbv12I GWGCWC 1 cut(s) 764
BbvI GCAGC 6 cut(s) 91, 544, 547, 560, 841, 985
BccI CCATC 1 cut(s) 118
BceAI ACGGC 1 cut(s) 935
BcgI CGANNNNNNTGC 2 cut(s) 805, 839
BcoDI GTCTC 3 cut(s) 14, 405, 762
BfaI CTAG 1 cut(s) 477
BfmI CTRYAG 2 cut(s) 320, 597
BfuAI ACCTGC 1 cut(s) 880
BisI GCNGC 6 cut(s) 80, 549, 558, 561, 855, 999
BlsI GCNGC 6 cut(s) 81, 550, 559, 562, 856, 1000
BmeRI GACNNNNNGTC 1 cut(s) 695
BmgBI CACGTC 1 cut(s) 43
BmiI GGNNCC 4 cut(s) 91, 189, 782, 1008
BmsI GCATC 4 cut(s) 286, 362, 544, 825
BpiI GAAGAC 2 cut(s) 242, 257
BplI GAGNNNNNCTC 2 cut(s) 635, 667
Bpu14I TTCGAA 1 cut(s) 731
BpuEI CTTGAG 3 cut(s) 288, 748, 963
BsaAI YACGTR 1 cut(s) 261
BsaI GGTCTC 1 cut(s) 14
BsaJI CCNNGG 2 cut(s) 400, 1002
BsaXI ACNNNNNCTCC 2 cut(s) 143, 173
Bsc4I CCNNNNNNNGG 1 cut(s) 34
Bse118I RCCGGY 1 cut(s) 34
Bse1I ACTGG 1 cut(s) 635
Bse3DI GCAATG 1 cut(s) 447
BseDI CCNNGG 2 cut(s) 400, 1002
BseGI GGATG 4 cut(s) 353, 394, 816, 958
BseLI CCNNNNNNNGG 1 cut(s) 34
BseMI GCAATG 1 cut(s) 447
BseMII CTCAG 3 cut(s) 437, 750, 811
BseNI ACTGG 1 cut(s) 635
BseRI GAGGAG 1 cut(s) 56
BseX3I CGGCCG 1 cut(s) 36
BseXI GCAGC 6 cut(s) 91, 544, 547, 560, 841, 985
Bsh1236I CGCG 2 cut(s) 60, 102
Bsh1285I CGRYCG 1 cut(s) 39
BshFI GGCC 1 cut(s) 38
BshNI GGYRCC 1 cut(s) 89
BsiEI CGRYCG 1 cut(s) 39
BsiHKAI GWGCWC 1 cut(s) 764
BsiSI CCGG 1 cut(s) 35
BslI CCNNNNNNNGG 1 cut(s) 34
BsmAI GTCTC 3 cut(s) 14, 405, 762
BsmI GAATGC 1 cut(s) 162
BsnI GGCC 1 cut(s) 38
Bso31I GGTCTC 1 cut(s) 14
Bsp119I TTCGAA 1 cut(s) 731
Bsp1286I GDGCHC 1 cut(s) 764
Bsp143I GATC 6 cut(s) 61, 379, 396, 724, 780, 822
BspACI CCGC 5 cut(s) 28, 58, 87, 100, 641
BspANI GGCC 1 cut(s) 38
BspCNI CTCAG 3 cut(s) 438, 749, 810
BspFNI CGCG 2 cut(s) 60, 102
BspHI TCATGA 1 cut(s) 579
BspLI GGNNCC 4 cut(s) 91, 189, 782, 1008
BspMI ACCTGC 1 cut(s) 880
BspPI GGATC 4 cut(s) 391, 732, 775, 788
BspT104I TTCGAA 1 cut(s) 731
BspT107I GGYRCC 1 cut(s) 89
BspTNI GGTCTC 1 cut(s) 14
BsrDI GCAATG 1 cut(s) 447
BsrFI RCCGGY 1 cut(s) 34
BsrI ACTGG 1 cut(s) 635
BssAI RCCGGY 1 cut(s) 34
BssECI CCNNGG 2 cut(s) 400, 1002
BssMI GATC 6 cut(s) 61, 379, 396, 724, 780, 822
BssT1I CCWWGG 2 cut(s) 400, 1002
Bst4CI ACNGT 2 cut(s) 179, 601
Bst6I CTCTTC 1 cut(s) 17
BstAPI GCANNNNNTGC 2 cut(s) 554, 557
BstBAI YACGTR 1 cut(s) 261
BstBI TTCGAA 1 cut(s) 731
BstC8I GCNNGC 3 cut(s) 32, 36, 110
BstDEI CTNAG 4 cut(s) 21, 446, 736, 797
BstF5I GGATG 4 cut(s) 353, 394, 816, 958
BstFNI CGCG 2 cut(s) 60, 102
BstHHI GCGC 3 cut(s) 51, 79, 211
BstKTI GATC 6 cut(s) 64, 382, 399, 727, 783, 825
BstMAI GTCTC 3 cut(s) 14, 405, 762
BstMBI GATC 6 cut(s) 61, 379, 396, 724, 780, 822
BstMCI CGRYCG 1 cut(s) 39
BstMWI GCNNNNNNNGC 6 cut(s) 31, 57, 217, 554, 557, 974
BstSFI CTRYAG 2 cut(s) 320, 597
BstUI CGCG 2 cut(s) 60, 102
BstV1I GCAGC 6 cut(s) 91, 544, 547, 560, 841, 985
BstV2I GAAGAC 2 cut(s) 242, 257
BstX2I RGATCY 1 cut(s) 780
BstXI CCANNNNNNTGG 1 cut(s) 407
BstYI RGATCY 1 cut(s) 780
BstZI CGGCCG 1 cut(s) 36
BsuRI GGCC 1 cut(s) 38
BtrI CACGTC 1 cut(s) 43
BtsCI GGATG 4 cut(s) 353, 394, 816, 958
BtsIMutI CAGTG 1 cut(s) 184
BveI ACCTGC 1 cut(s) 880
Cac8I GCNNGC 3 cut(s) 32, 36, 110
CaiI CAGNNNCTG 1 cut(s) 557
CciI TCATGA 1 cut(s) 579
CfoI GCGC 3 cut(s) 51, 79, 211
Cfr10I RCCGGY 1 cut(s) 34
CseI GACGC 1 cut(s) 226
Csp6I GTAC 1 cut(s) 90
CspCI CAANNNNNGTGG 2 cut(s) 289, 324
CviAII CATG 4 cut(s) 421, 502, 580, 836
CviQI GTAC 1 cut(s) 90
DdeI CTNAG 4 cut(s) 21, 446, 736, 797
DpnI GATC 6 cut(s) 63, 381, 398, 726, 782, 824
DpnII GATC 6 cut(s) 61, 379, 396, 724, 780, 822
DraI TTTAAA 1 cut(s) 937
DriI GACNNNNNGTC 1 cut(s) 695
EaeI YGGCCR 1 cut(s) 36
EagI CGGCCG 1 cut(s) 36
Eam1104I CTCTTC 1 cut(s) 17
Eam1105I GACNNNNNGTC 1 cut(s) 695
EarI CTCTTC 1 cut(s) 17
Ecl136II GAGCTC 1 cut(s) 762
EclXI CGGCCG 1 cut(s) 36
Eco130I CCWWGG 2 cut(s) 400, 1002
Eco24I GRGCYC 1 cut(s) 764
Eco31I GGTCTC 1 cut(s) 14
Eco52I CGGCCG 1 cut(s) 36
Eco53kI GAGCTC 1 cut(s) 762
EcoICRI GAGCTC 1 cut(s) 762
EcoT14I CCWWGG 2 cut(s) 400, 1002
EcoT38I GRGCYC 1 cut(s) 764
ErhI CCWWGG 2 cut(s) 400, 1002
FaeI CATG 4 cut(s) 424, 505, 583, 839
FalI AAGNNNNNCTT 3 cut(s) 28, 497, 529
FatI CATG 4 cut(s) 420, 501, 579, 835
FauI CCCGC 3 cut(s) 35, 65, 107
Fnu4HI GCNGC 6 cut(s) 80, 549, 558, 561, 855, 999
FokI GGATG 4 cut(s) 340, 401, 803, 965
FriOI GRGCYC 1 cut(s) 764
Fsp4HI GCNGC 6 cut(s) 80, 549, 558, 561, 855, 999
FspBI CTAG 1 cut(s) 477
FspI TGCGCA 2 cut(s) 78, 210
GlaI GCGC 3 cut(s) 50, 78, 210
GluI GCNGC 6 cut(s) 80, 549, 558, 561, 855, 999
HaeIII GGCC 1 cut(s) 38
HapII CCGG 1 cut(s) 35
HgaI GACGC 1 cut(s) 226
HhaI GCGC 3 cut(s) 51, 79, 211
Hin1II CATG 4 cut(s) 424, 505, 583, 839
Hin6I GCGC 3 cut(s) 49, 77, 209
HinP1I GCGC 3 cut(s) 49, 77, 209
HindIII AAGCTT 1 cut(s) 201
HinfI GANTC 7 cut(s) 95, 182, 491, 665, 748, 790, 803
HpaII CCGG 1 cut(s) 35
Hpy166II GTNNAC 1 cut(s) 337
Hpy188I TCNGA 6 cut(s) 187, 199, 255, 270, 358, 800
Hpy188III TCNNGA 3 cut(s) 580, 765, 820
Hpy8I GTNNAC 1 cut(s) 337
Hpy99I CGWCG 1 cut(s) 44
HpyCH4III ACNGT 2 cut(s) 179, 601
HpyCH4IV ACGT 2 cut(s) 42, 260
HpyCH4V TGCA 7 cut(s) 162, 353, 440, 456, 548, 563, 899
HpyF10VI GCNNNNNNNGC 6 cut(s) 31, 57, 217, 554, 557, 974
HpyF3I CTNAG 4 cut(s) 21, 446, 736, 797
HpySE526I ACGT 2 cut(s) 42, 260
Hsp92II CATG 4 cut(s) 424, 505, 583, 839
HspAI GCGC 3 cut(s) 49, 77, 209
KpnI GGTACC 1 cut(s) 93
KroI GCCGGC 1 cut(s) 34
KroNI GCCGGC 1 cut(s) 36
Kzo9I GATC 6 cut(s) 61, 379, 396, 724, 780, 822
LmnI GCTCC 2 cut(s) 187, 249
Lsp1109I GCAGC 6 cut(s) 91, 544, 547, 560, 841, 985
LweI GCATC 4 cut(s) 286, 362, 544, 825
MaeI CTAG 1 cut(s) 477
MaeII ACGT 2 cut(s) 42, 260
MalI GATC 6 cut(s) 63, 381, 398, 726, 782, 824
MboI GATC 6 cut(s) 61, 379, 396, 724, 780, 822
MboII GAAGA 5 cut(s) 4, 242, 257, 517, 785
MfeI CAATTG 1 cut(s) 212
MflI RGATCY 1 cut(s) 780
MhlI GDGCHC 1 cut(s) 764
MluCI AATT 7 cut(s) 212, 535, 622, 673, 772, 939, 959
MlyI GAGTC 3 cut(s) 191, 742, 812
MmeI TCCRAC 2 cut(s) 165, 642
MnlI CCTC 8 cut(s) 77, 109, 229, 277, 318, 771, 943, 958
MroNI GCCGGC 1 cut(s) 34
MroXI GAANNNNTTC 2 cut(s) 509, 831
MseI TTAA 3 cut(s) 570, 843, 936
MslI CAYNNNNRTG 3 cut(s) 419, 435, 468
MspA1I CMGCKG 1 cut(s) 740
MspI CCGG 1 cut(s) 35
MunI CAATTG 1 cut(s) 212
Mva1269I GAATGC 1 cut(s) 162
MvnI CGCG 2 cut(s) 60, 102
MwoI GCNNNNNNNGC 6 cut(s) 31, 57, 217, 554, 557, 974
NaeI GCCGGC 1 cut(s) 36
NdeII GATC 6 cut(s) 61, 379, 396, 724, 780, 822
NgoMIV GCCGGC 1 cut(s) 34
NlaIII CATG 4 cut(s) 424, 505, 583, 839
NlaIV GGNNCC 4 cut(s) 91, 189, 782, 1008
NsbI TGCGCA 2 cut(s) 78, 210
NspV TTCGAA 1 cut(s) 731
OliI CACNNNNGTG 1 cut(s) 468
PagI TCATGA 1 cut(s) 579
PcsI WCGNNNNNNNCGW 1 cut(s) 266
PctI GAATGC 1 cut(s) 162
PdiI GCCGGC 1 cut(s) 36
PdmI GAANNNNTTC 2 cut(s) 509, 831
PfeI GAWTC 4 cut(s) 95, 491, 665, 790
PkrI GCNGC 6 cut(s) 81, 550, 559, 562, 856, 1000
PleI GAGTC 3 cut(s) 190, 742, 811
PpsI GAGTC 3 cut(s) 190, 742, 811
Ppu21I YACGTR 1 cut(s) 261
Psp124BI GAGCTC 1 cut(s) 764
PspN4I GGNNCC 4 cut(s) 91, 189, 782, 1008
PstNI CAGNNNCTG 1 cut(s) 557
PsuI RGATCY 1 cut(s) 780
PvuII CAGCTG 1 cut(s) 740
RsaI GTAC 1 cut(s) 91
RsaNI GTAC 1 cut(s) 90
RseI CAYNNNNRTG 3 cut(s) 419, 435, 468
SacI GAGCTC 1 cut(s) 764
SaqAI TTAA 3 cut(s) 570, 843, 936
SatI GCNGC 6 cut(s) 80, 549, 558, 561, 855, 999
Sau3AI GATC 6 cut(s) 61, 379, 396, 724, 780, 822
SchI GAGTC 3 cut(s) 191, 742, 812
SduI GDGCHC 1 cut(s) 764
SfaNI GCATC 4 cut(s) 286, 362, 544, 825
SfcI CTRYAG 2 cut(s) 320, 597
SfuI TTCGAA 1 cut(s) 731
SmiMI CAYNNNNRTG 3 cut(s) 419, 435, 468
SmlI CTYRAG 3 cut(s) 303, 763, 978
SmoI CTYRAG 3 cut(s) 303, 763, 978
Sse9I AATT 7 cut(s) 212, 535, 622, 673, 772, 939, 959
SsiI CCGC 5 cut(s) 28, 58, 87, 100, 641
SspMI CTAG 1 cut(s) 477
SstI GAGCTC 1 cut(s) 764
StyI CCWWGG 2 cut(s) 400, 1002
TaaI ACNGT 2 cut(s) 179, 601
TaiI ACGT 2 cut(s) 45, 263
TaqI TCGA 4 cut(s) 540, 731, 751, 825
TasI AATT 7 cut(s) 212, 535, 622, 673, 772, 939, 959
TfiI GAWTC 4 cut(s) 95, 491, 665, 790
Tru1I TTAA 3 cut(s) 570, 843, 936
Tru9I TTAA 3 cut(s) 570, 843, 936
TscAI CASTG 1 cut(s) 184
TseI GCWGC 6 cut(s) 79, 548, 557, 560, 854, 998
TspDTI ATGAA 5 cut(s) 17, 518, 803, 824, 969
TspGWI ACGGA 1 cut(s) 236
TspRI CASTG 1 cut(s) 184
XapI RAATTY 1 cut(s) 535
XmnI GAANNNNTTC 2 cut(s) 509, 831
XspI CTAG 1 cut(s) 477
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.