AT4G17270

MO25-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0004058
Physical Location & Seq
Forward (+)
9676056 .. 9678777
2722 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G17270.1

Sequence Viewer

Length: 1032 bp
ATGAGAGGTCTTTTCAAATCCAAACCGCGGACTCCCGCTGATATTGTTCGTCAGACTCGCGATCTCCTCCTCTACGCCGATCGATCCAACTCCTTCCCTGACCTTCGAGAGTCCAAACGCGAGGAAAAGATGGTGGAACTAAGTAAGAGCATACGAGATTTGAAGTTGATTCTATATGGAAACAGTGAGGCTGAGCCTGTTGCTGAAGCTTGTGCTCAGTTGACTCAGGAGTTCTTTAAGGCTGATACTCTTCGCCGTTTGCTCACTTCTCTTCCTAATTTGAACTTGGAGGCGAGGAAAGATGCTACACAAGTTGTTGCAAATCTTCAGAGGCAACAAGTCAATTCACGTCTTATTGCTGCTGATTATCTTGAATCCAACATTGATCTTATGGATTTTCTAGTTGATGGGTTTGAAAACACCGATATGGCGTTACACTATGGTACTATGTTTAGAGAGTGCATCCGTCATCAGATTGTTGCAAAATATGTTTTGGACTCGGAGCACGTGAAGAAGTTTTTTTACTACATACAGCTTCCCAATTTCGACATTGCTGCTGATGCTGCTGCAACTTTTAAGGAACTTCTGACAAGGCACAAGTCTACAGTTGCTGAGTTTCTCATTAAGAATGAAGACTGGTTTTTTGCAGACTACAACTCAAAGCTTCTTGAATCAACTAATTATATTACCCGACGGCAAGCTATTAAGTTGTTGGGCGATATATTATTGGATAGGTCAAATTCGGCTGTGATGACGAAGTATGTGAGCTCGATGGATAACTTGAGGATTCTGATGAATCTTCTCAGAGAATCAAGCAAGACTATTCAGATAGAAGCTTTCCATGTTTTCAAGCTGTTTGTAGCGAACCAAAACAAGCCTTCAGACATCGCCAACATTCTGGTGGCAAACAGAAACAAGCTTCTGAGATTGTTGGCTGATATCAAGCCGGACAAAGAGGACGAGAGGTTTGACGCAGACAAAGCTCAGGTTGTGAGAGAGATTGCAAACCTTAAGCTGCGAGAGCTTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko04150 ko04152 map04150 map04152
Pfam Domains
Protein Families
Mo25

Protein Analysis

343

Amino Acids

39.65

Weight (kDa)

8.32

Isoelectric Point (pI)

39.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mo25 PF08569 4 - 338 5.1e-127 Mo25-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 602
AccII CGCG 3 cut(s) 28, 60, 120
AciI CCGC 3 cut(s) 26, 28, 36
AclWI GGATC 1 cut(s) 78
AcsI RAATTY 1 cut(s) 739
AcuI CTGAAG 3 cut(s) 225, 311, 864
AcvI CACGTG 1 cut(s) 508
AfaI GTAC 1 cut(s) 445
AfiI CCNNNNNNNGG 1 cut(s) 27
AflII CTTAAG 1 cut(s) 1010
AgsI TTSAA 7 cut(s) 16, 163, 283, 374, 416, 671, 850
AjiI CACGTC 1 cut(s) 350
Alw21I GWGCWC 3 cut(s) 217, 507, 770
AlwI GGATC 1 cut(s) 78
AlwNI CAGNNNCTG 1 cut(s) 611
ApeKI GCWGC 5 cut(s) 359, 554, 563, 566, 1015
ApoI RAATTY 1 cut(s) 739
ArsI GACNNNNNNTTYG 4 cut(s) 626, 658, 950, 982
BanII GRGCYC 1 cut(s) 770
BarI GAAGNNNNNNTAC 2 cut(s) 506, 538
BbrPI CACGTG 1 cut(s) 508
BbsI GAAGAC 1 cut(s) 639
Bbv12I GWGCWC 3 cut(s) 217, 507, 770
BbvI GCAGC 5 cut(s) 346, 541, 550, 553, 1002
BccI CCATC 3 cut(s) 124, 401, 766
BceAI ACGGC 2 cut(s) 240, 710
BcgI CGANNNNNNTGC 2 cut(s) 536, 570
BfaI CTAG 1 cut(s) 401
BfmI CTRYAG 1 cut(s) 603
BfrI CTTAAG 1 cut(s) 1010
BisI GCNGC 5 cut(s) 360, 555, 564, 567, 1016
BlpI GCTNAGC 1 cut(s) 192
BlsI GCNGC 5 cut(s) 361, 556, 565, 568, 1017
BmgBI CACGTC 1 cut(s) 350
BmsI GCATC 3 cut(s) 292, 471, 550
BpiI GAAGAC 1 cut(s) 639
Bpu10I CCTNAGC 1 cut(s) 984
Bpu1102I GCTNAGC 1 cut(s) 192
BpuEI CTTGAG 1 cut(s) 802
Bsa29I ATCGAT 1 cut(s) 82
BsaAI YACGTR 1 cut(s) 508
BsaJI CCNNGG 1 cut(s) 26
Bsc4I CCNNNNNNNGG 1 cut(s) 27
Bse1I ACTGG 1 cut(s) 641
Bse3DI GCAATG 1 cut(s) 549
BseCI ATCGAT 1 cut(s) 82
BseDI CCNNGG 1 cut(s) 26
BseGI GGATG 1 cut(s) 462
BseLI CCNNNNNNNGG 1 cut(s) 27
BseMI GCAATG 1 cut(s) 549
BseMII CTCAG 7 cut(s) 183, 230, 239, 603, 817, 914, 998
BseNI ACTGG 1 cut(s) 641
BseRI GAGGAG 2 cut(s) 56, 59
BseXI GCAGC 5 cut(s) 346, 541, 550, 553, 1002
Bsh1236I CGCG 3 cut(s) 28, 60, 120
Bsh1285I CGRYCG 1 cut(s) 82
BshVI ATCGAT 1 cut(s) 82
BsiEI CGRYCG 1 cut(s) 82
BsiHKAI GWGCWC 3 cut(s) 217, 507, 770
BsiSI CCGG 1 cut(s) 947
BslI CCNNNNNNNGG 1 cut(s) 27
Bsp1286I GDGCHC 3 cut(s) 217, 507, 770
Bsp143I GATC 4 cut(s) 61, 79, 83, 385
Bsp1720I GCTNAGC 1 cut(s) 192
Bsp68I TCGCGA 1 cut(s) 60
BspACI CCGC 3 cut(s) 26, 28, 36
BspCNI CTCAG 7 cut(s) 184, 229, 238, 604, 816, 915, 997
BspDI ATCGAT 1 cut(s) 82
BspFNI CGCG 3 cut(s) 28, 60, 120
BspPI GGATC 1 cut(s) 78
BspTI CTTAAG 1 cut(s) 1010
BsrDI GCAATG 1 cut(s) 549
BsrI ACTGG 1 cut(s) 641
BssECI CCNNGG 1 cut(s) 26
BssMI GATC 4 cut(s) 61, 79, 83, 385
Bst4CI ACNGT 2 cut(s) 185, 607
Bst6I CTCTTC 2 cut(s) 255, 276
BstAFI CTTAAG 1 cut(s) 1010
BstBAI YACGTR 1 cut(s) 508
BstC8I GCNNGC 2 cut(s) 699, 1026
BstDEI CTNAG 8 cut(s) 140, 192, 216, 225, 612, 803, 923, 984
BstDSI CCRYGG 1 cut(s) 26
BstF5I GGATG 1 cut(s) 462
BstFNI CGCG 3 cut(s) 28, 60, 120
BstKTI GATC 4 cut(s) 64, 82, 86, 388
BstMBI GATC 4 cut(s) 61, 79, 83, 385
BstMCI CGRYCG 1 cut(s) 82
BstMWI GCNNNNNNNGC 4 cut(s) 560, 563, 980, 1021
BstSFI CTRYAG 1 cut(s) 603
BstUI CGCG 3 cut(s) 28, 60, 120
BstV1I GCAGC 5 cut(s) 346, 541, 550, 553, 1002
BstV2I GAAGAC 1 cut(s) 639
BstXI CCANNNNNNTGG 1 cut(s) 898
Bsu15I ATCGAT 1 cut(s) 82
BsuTUI ATCGAT 1 cut(s) 82
BtgI CCRYGG 1 cut(s) 26
BtgZI GCGATG 1 cut(s) 871
BtrI CACGTC 1 cut(s) 350
BtsCI GGATG 1 cut(s) 462
BtsIMutI CAGTG 1 cut(s) 190
BtuMI TCGCGA 1 cut(s) 60
Cac8I GCNNGC 2 cut(s) 699, 1026
CaiI CAGNNNCTG 1 cut(s) 611
Cfr42I CCGCGG 1 cut(s) 29
ClaI ATCGAT 1 cut(s) 82
CseI GACGC 1 cut(s) 980
Csp6I GTAC 1 cut(s) 444
CviAII CATG 1 cut(s) 842
CviQI GTAC 1 cut(s) 444
DdeI CTNAG 8 cut(s) 140, 192, 216, 225, 612, 803, 923, 984
DpnI GATC 4 cut(s) 63, 81, 85, 387
DpnII GATC 4 cut(s) 61, 79, 83, 385
Eam1104I CTCTTC 2 cut(s) 255, 276
EarI CTCTTC 2 cut(s) 255, 276
Ecl136II GAGCTC 1 cut(s) 768
Eco24I GRGCYC 1 cut(s) 770
Eco32I GATATC 1 cut(s) 940
Eco53kI GAGCTC 1 cut(s) 768
Eco57I CTGAAG 3 cut(s) 225, 311, 864
Eco72I CACGTG 1 cut(s) 508
EcoICRI GAGCTC 1 cut(s) 768
EcoRV GATATC 1 cut(s) 940
EcoT38I GRGCYC 1 cut(s) 770
FaeI CATG 1 cut(s) 845
FatI CATG 1 cut(s) 841
FauI CCCGC 1 cut(s) 43
FblI GTMKAC 1 cut(s) 602
Fnu4HI GCNGC 5 cut(s) 360, 555, 564, 567, 1016
FokI GGATG 1 cut(s) 449
FriOI GRGCYC 1 cut(s) 770
Fsp4HI GCNGC 5 cut(s) 360, 555, 564, 567, 1016
FspBI CTAG 1 cut(s) 401
GluI GCNGC 5 cut(s) 360, 555, 564, 567, 1016
HapII CCGG 1 cut(s) 947
HgaI GACGC 1 cut(s) 980
Hin1II CATG 1 cut(s) 845
HincII GTYRAC 1 cut(s) 222
HindII GTYRAC 1 cut(s) 222
HindIII AAGCTT 4 cut(s) 207, 662, 834, 917
HpaII CCGG 1 cut(s) 947
Hpy166II GTNNAC 2 cut(s) 222, 603
Hpy188III TCNNGA 5 cut(s) 59, 107, 227, 371, 668
Hpy8I GTNNAC 2 cut(s) 222, 603
Hpy99I CGWCG 1 cut(s) 696
HpyAV CCTTC 3 cut(s) 103, 113, 888
HpyCH4III ACNGT 2 cut(s) 185, 607
HpyCH4IV ACGT 2 cut(s) 349, 507
HpyCH4V TGCA 6 cut(s) 320, 462, 482, 569, 647, 1004
HpyF10VI GCNNNNNNNGC 4 cut(s) 560, 563, 980, 1021
HpyF3I CTNAG 8 cut(s) 140, 192, 216, 225, 612, 803, 923, 984
HpySE526I ACGT 2 cut(s) 349, 507
Hsp92II CATG 1 cut(s) 845
KspI CCGCGG 1 cut(s) 29
Kzo9I GATC 4 cut(s) 61, 79, 83, 385
LmnI GCTCC 1 cut(s) 502
LpnPI CCDG 7 cut(s) 111, 210, 212, 622, 884, 960, 971
Lsp1109I GCAGC 5 cut(s) 346, 541, 550, 553, 1002
LweI GCATC 3 cut(s) 292, 471, 550
MaeI CTAG 1 cut(s) 401
MaeII ACGT 2 cut(s) 349, 507
MaeIII GTNAC 1 cut(s) 432
MalI GATC 4 cut(s) 63, 81, 85, 387
MboI GATC 4 cut(s) 61, 79, 83, 385
MboII GAAGA 6 cut(s) 242, 263, 317, 523, 644, 791
MhlI GDGCHC 3 cut(s) 217, 507, 770
MluCI AATT 5 cut(s) 277, 343, 541, 679, 739
MlyI GAGTC 5 cut(s) 25, 49, 119, 217, 491
MmeI TCCRAC 2 cut(s) 111, 402
MseI TTAA 5 cut(s) 237, 576, 624, 705, 1011
MslI CAYNNNNRTG 2 cut(s) 425, 899
MspA1I CMGCKG 2 cut(s) 28, 38
MspCI CTTAAG 1 cut(s) 1010
MspI CCGG 1 cut(s) 947
MvnI CGCG 3 cut(s) 28, 60, 120
MwoI GCNNNNNNNGC 4 cut(s) 560, 563, 980, 1021
NdeII GATC 4 cut(s) 61, 79, 83, 385
NlaIII CATG 1 cut(s) 845
NruI TCGCGA 1 cut(s) 60
PfeI GAWTC 6 cut(s) 169, 374, 671, 787, 796, 809
PkrI GCNGC 5 cut(s) 361, 556, 565, 568, 1017
Ple19I CGATCG 1 cut(s) 82
PleI GAGTC 5 cut(s) 25, 49, 118, 217, 491
PmaCI CACGTG 1 cut(s) 508
PmlI CACGTG 1 cut(s) 508
PpsI GAGTC 5 cut(s) 25, 49, 118, 217, 491
Ppu21I YACGTR 1 cut(s) 508
Psp124BI GAGCTC 1 cut(s) 770
PspCI CACGTG 1 cut(s) 508
PstNI CAGNNNCTG 1 cut(s) 611
PvuI CGATCG 1 cut(s) 82
RruI TCGCGA 1 cut(s) 60
RsaI GTAC 1 cut(s) 445
RsaNI GTAC 1 cut(s) 444
RseI CAYNNNNRTG 2 cut(s) 425, 899
SacI GAGCTC 1 cut(s) 770
SacII CCGCGG 1 cut(s) 29
SaqAI TTAA 5 cut(s) 237, 576, 624, 705, 1011
SatI GCNGC 5 cut(s) 360, 555, 564, 567, 1016
Sau3AI GATC 4 cut(s) 61, 79, 83, 385
SchI GAGTC 5 cut(s) 25, 49, 119, 217, 491
SduI GDGCHC 3 cut(s) 217, 507, 770
SfaNI GCATC 3 cut(s) 292, 471, 550
SfcI CTRYAG 1 cut(s) 603
Sfr303I CCGCGG 1 cut(s) 29
SgrBI CCGCGG 1 cut(s) 29
SmiMI CAYNNNNRTG 2 cut(s) 425, 899
SmlI CTYRAG 2 cut(s) 781, 1010
SmoI CTYRAG 2 cut(s) 781, 1010
Sse9I AATT 5 cut(s) 277, 343, 541, 679, 739
SsiI CCGC 3 cut(s) 26, 28, 36
SspMI CTAG 1 cut(s) 401
SstI GAGCTC 1 cut(s) 770
TaaI ACNGT 2 cut(s) 185, 607
TaiI ACGT 2 cut(s) 352, 510
TaqI TCGA 4 cut(s) 82, 106, 546, 770
TasI AATT 5 cut(s) 277, 343, 541, 679, 739
TfiI GAWTC 6 cut(s) 169, 374, 671, 787, 796, 809
Tru1I TTAA 5 cut(s) 237, 576, 624, 705, 1011
Tru9I TTAA 5 cut(s) 237, 576, 624, 705, 1011
TscAI CASTG 1 cut(s) 190
TseI GCWGC 5 cut(s) 359, 554, 563, 566, 1015
TspDTI ATGAA 2 cut(s) 645, 809
TspGWI ACGGA 1 cut(s) 455
TspRI CASTG 1 cut(s) 190
Vha464I CTTAAG 1 cut(s) 1010
XapI RAATTY 1 cut(s) 739
XcmI CCANNNNNNNNNTGG 1 cut(s) 898
XmiI GTMKAC 1 cut(s) 602
XspI CTAG 1 cut(s) 401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.