AT5G47540

MO25-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0004058
Physical Location & Seq
Reverse (-)
19283029 .. 19285758
2730 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G47540.1

Sequence Viewer

Length: 1032 bp
ATGAAAGGGCTTTTCAAGTCTAAGCCACGCACTCCTGCTGACCTTGTTCGACAAACCCGCGATCTCCTTCTCTTCTCCGATCGATCTACCTCTTTGCCTGACCTCCGAGATTCCAAACGCGACGAAAAGATGGCGGAATTAAGCCGGAATATCCGTGACATGAAGTCGATTCTCTACGGGAACAGCGAAGCAGAGCCTGTGGCAGAAGCTTGTGCACAGTTGACTCAAGAATTCTTTAAAGAGGATACTCTACGTCTCTTGATTACTTGTCTCCCTAAACTTAACTTGGAGACGAGGAAAGATGCTACACAAGTTGTTGCAAATCTACAGAGGCAACAGGTTAATTCACGGTTGATTGCTTCTGATTATTTAGAAGCCAACATTGATCTCATGGATGTTTTGATTGAAGGCTTCGAGAACACAGACATGGCTTTACACTATGGTGCTATGTTTAGGGAGTGTATCCGTCATCAGATTGTGGCTAAATATGTTTTGGAGTCTGACCATGTGAAGAAATTCTTTGATTACATACAGCTTCCAAATTTCGACATTGCTGCCGATGCTGCTGCTACTTTTAAGGAACTGCTGACAAGGCATAAGTCTACTGTTGCCGAGTTTCTCACCAAGAATGAAGACTGGTTTTTCGCAGACTACAACTCAAAGCTTCTTGAATCAAGTAATTATATAACCAGACGGCAAGCTATTAAGTTGTTGGGTGATATATTATTGGATCGATCAAATTCAGCTGTGATGACGAAATATGTGAGCTCGAGGGATAACTTGAGGATTCTCATGAATCTTCTAAGAGAGTCAAGCAAGAGTATCCAAATAGAAGCATTCCATGTCTTTAAGCTGTTTGCAGCGAACCAAAACAAGCCTGCGGATATAGTCAACATTCTGGTGGCCAACAGAAGCAAGCTTCTGAGATTGTTGGCTGATTTGAAACCAGACAAAGAGGATGAGAGGTTTGAAGCAGACAAAAGTCAGGTTTTGAGAGAAATCGCAGCCCTTGAACCTCGAGATCTTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko04150 ko04152 map04150 map04152
Pfam Domains
Protein Families
Mo25

Protein Analysis

343

Amino Acids

39.46

Weight (kDa)

6.57

Isoelectric Point (pI)

43.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mo25 PF08569 4 - 338 4.2e-130 Mo25-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 602
AccII CGCG 2 cut(s) 60, 120
AciI CCGC 3 cut(s) 58, 134, 881
AclWI GGATC 1 cut(s) 738
AcoI YGGCCR 1 cut(s) 903
AcsI RAATTY 4 cut(s) 230, 515, 541, 739
AgsI TTSAA 6 cut(s) 16, 407, 671, 943, 971, 1013
AhdI GACNNNNNGTC 1 cut(s) 163
AleI CACNNNNGTG 1 cut(s) 441
AluBI AGCT 8 cut(s) 209, 535, 664, 701, 746, 768, 853, 919
AluI AGCT 8 cut(s) 209, 535, 664, 701, 746, 768, 853, 919
Alw21I GWGCWC 2 cut(s) 217, 770
Alw26I GTCTC 3 cut(s) 260, 275, 284
Alw44I GTGCAC 1 cut(s) 213
AlwI GGATC 1 cut(s) 738
AlwNI CAGNNNCTG 1 cut(s) 197
Ama87I CYCGRG 2 cut(s) 769, 1017
AoxI GGCC 1 cut(s) 903
ApaLI GTGCAC 1 cut(s) 213
ApeKI GCWGC 5 cut(s) 554, 563, 566, 860, 1004
ApoI RAATTY 4 cut(s) 230, 515, 541, 739
ArsI GACNNNNNNTTYG 2 cut(s) 626, 658
Asp700I GAANNNNTTC 1 cut(s) 515
AsuHPI GGTGA 2 cut(s) 613, 728
AvaI CYCGRG 2 cut(s) 769, 1017
BaeGI GKGCMC 1 cut(s) 217
BalI TGGCCA 1 cut(s) 905
BanII GRGCYC 1 cut(s) 770
BbsI GAAGAC 1 cut(s) 639
Bbv12I GWGCWC 2 cut(s) 217, 770
BbvI GCAGC 5 cut(s) 541, 550, 553, 872, 1016
BccI CCATC 1 cut(s) 124
BceAI ACGGC 1 cut(s) 710
BcgI CGANNNNNNTGC 4 cut(s) 536, 548, 570, 582
BciVI GTATCC 3 cut(s) 238, 473, 833
BcoDI GTCTC 3 cut(s) 260, 275, 284
BfmI CTRYAG 1 cut(s) 326
BfuI GTATCC 3 cut(s) 238, 473, 833
BglII AGATCT 1 cut(s) 1021
BisI GCNGC 5 cut(s) 555, 564, 567, 861, 1005
BlsI GCNGC 5 cut(s) 556, 565, 568, 862, 1006
BmeRI GACNNNNNGTC 1 cut(s) 163
BmeT110I CYCGRG 2 cut(s) 769, 1017
BmsI GCATC 2 cut(s) 292, 550
BoxI GACNNNNGTC 1 cut(s) 981
BpiI GAAGAC 1 cut(s) 639
BpuEI CTTGAG 2 cut(s) 210, 802
Bsa29I ATCGAT 2 cut(s) 82, 733
Bse1I ACTGG 1 cut(s) 641
Bse3DI GCAATG 1 cut(s) 549
BseCI ATCGAT 2 cut(s) 82, 733
BseGI GGATG 2 cut(s) 400, 964
BseMI GCAATG 1 cut(s) 549
BseMII CTCAG 1 cut(s) 914
BseNI ACTGG 1 cut(s) 641
BseSI GKGCMC 1 cut(s) 217
BseXI GCAGC 5 cut(s) 541, 550, 553, 872, 1016
Bsh1236I CGCG 2 cut(s) 60, 120
Bsh1285I CGRYCG 1 cut(s) 82
BshFI GGCC 1 cut(s) 905
BshVI ATCGAT 2 cut(s) 82, 733
BsiEI CGRYCG 1 cut(s) 82
BsiHKAI GWGCWC 2 cut(s) 217, 770
BsiHKCI CYCGRG 2 cut(s) 769, 1017
BsiSI CCGG 1 cut(s) 145
BsmAI GTCTC 3 cut(s) 260, 275, 284
BsmBI CGTCTC 2 cut(s) 260, 284
BsmI GAATGC 1 cut(s) 836
BsnI GGCC 1 cut(s) 905
BsoBI CYCGRG 2 cut(s) 769, 1017
Bsp1286I GDGCHC 2 cut(s) 217, 770
Bsp143I GATC 7 cut(s) 61, 79, 83, 385, 730, 734, 1021
BspACI CCGC 3 cut(s) 58, 134, 881
BspANI GGCC 1 cut(s) 905
BspCNI CTCAG 1 cut(s) 915
BspDI ATCGAT 2 cut(s) 82, 733
BspFNI CGCG 2 cut(s) 60, 120
BspHI TCATGA 1 cut(s) 792
BspPI GGATC 1 cut(s) 738
BsrDI GCAATG 1 cut(s) 549
BsrI ACTGG 1 cut(s) 641
BssMI GATC 7 cut(s) 61, 79, 83, 385, 730, 734, 1021
Bst4CI ACNGT 3 cut(s) 219, 351, 607
Bst6I CTCTTC 1 cut(s) 77
BstC8I GCNNGC 3 cut(s) 699, 879, 917
BstDEI CTNAG 3 cut(s) 21, 803, 923
BstF5I GGATG 2 cut(s) 400, 964
BstFNI CGCG 2 cut(s) 60, 120
BstKTI GATC 7 cut(s) 64, 82, 86, 388, 733, 737, 1024
BstMAI GTCTC 3 cut(s) 260, 275, 284
BstMBI GATC 7 cut(s) 61, 79, 83, 385, 730, 734, 1021
BstMCI CGRYCG 1 cut(s) 82
BstMWI GCNNNNNNNGC 3 cut(s) 560, 563, 592
BstPAI GACNNNNGTC 1 cut(s) 981
BstSFI CTRYAG 1 cut(s) 326
BstSLI GKGCMC 1 cut(s) 217
BstUI CGCG 2 cut(s) 60, 120
BstV1I GCAGC 5 cut(s) 541, 550, 553, 872, 1016
BstV2I GAAGAC 1 cut(s) 639
BstX2I RGATCY 1 cut(s) 1021
BstYI RGATCY 1 cut(s) 1021
Bsu15I ATCGAT 2 cut(s) 82, 733
BsuI GTATCC 3 cut(s) 238, 473, 833
BsuRI GGCC 1 cut(s) 905
BsuTUI ATCGAT 2 cut(s) 82, 733
BtsCI GGATG 2 cut(s) 400, 964
Cac8I GCNNGC 3 cut(s) 699, 879, 917
CaiI CAGNNNCTG 1 cut(s) 197
CciI TCATGA 1 cut(s) 792
ClaI ATCGAT 2 cut(s) 82, 733
CviAII CATG 6 cut(s) 160, 391, 427, 506, 793, 842
DdeI CTNAG 3 cut(s) 21, 803, 923
DpnI GATC 7 cut(s) 63, 81, 85, 387, 732, 736, 1023
DpnII GATC 7 cut(s) 61, 79, 83, 385, 730, 734, 1021
DraI TTTAAA 1 cut(s) 238
DriI GACNNNNNGTC 1 cut(s) 163
EaeI YGGCCR 1 cut(s) 903
Eam1104I CTCTTC 1 cut(s) 77
Eam1105I GACNNNNNGTC 1 cut(s) 163
EarI CTCTTC 1 cut(s) 77
EciI GGCGGA 1 cut(s) 149
Ecl136II GAGCTC 1 cut(s) 768
Eco24I GRGCYC 1 cut(s) 770
Eco53kI GAGCTC 1 cut(s) 768
Eco88I CYCGRG 2 cut(s) 769, 1017
EcoICRI GAGCTC 1 cut(s) 768
EcoRI GAATTC 1 cut(s) 230
EcoT38I GRGCYC 1 cut(s) 770
Esp3I CGTCTC 2 cut(s) 260, 284
FaeI CATG 6 cut(s) 163, 394, 430, 509, 796, 845
FalI AAGNNNNNCTT 2 cut(s) 503, 535
FatI CATG 6 cut(s) 159, 390, 426, 505, 792, 841
FauI CCCGC 1 cut(s) 65
FblI GTMKAC 1 cut(s) 602
Fnu4HI GCNGC 5 cut(s) 555, 564, 567, 861, 1005
FokI GGATG 2 cut(s) 407, 971
FriOI GRGCYC 1 cut(s) 770
Fsp4HI GCNGC 5 cut(s) 555, 564, 567, 861, 1005
GluI GCNGC 5 cut(s) 555, 564, 567, 861, 1005
HaeIII GGCC 1 cut(s) 905
HapII CCGG 1 cut(s) 145
Hin1II CATG 6 cut(s) 163, 394, 430, 509, 796, 845
HincII GTYRAC 2 cut(s) 222, 892
HindII GTYRAC 2 cut(s) 222, 892
HindIII AAGCTT 3 cut(s) 207, 662, 917
HinfI GANTC 8 cut(s) 110, 169, 223, 497, 671, 787, 796, 809
HpaII CCGG 1 cut(s) 145
HphI GGTGA 2 cut(s) 613, 728
Hpy166II GTNNAC 4 cut(s) 215, 222, 603, 892
Hpy188I TCNGA 6 cut(s) 79, 107, 364, 474, 502, 924
Hpy188III TCNNGA 6 cut(s) 227, 259, 415, 668, 793, 1019
Hpy8I GTNNAC 4 cut(s) 215, 222, 603, 892
Hpy99I CGWCG 1 cut(s) 125
HpyAV CCTTC 2 cut(s) 77, 401
HpyCH4III ACNGT 3 cut(s) 219, 351, 607
HpyCH4IV ACGT 1 cut(s) 253
HpyCH4V TGCA 3 cut(s) 215, 320, 860
HpyF10VI GCNNNNNNNGC 3 cut(s) 560, 563, 592
HpyF3I CTNAG 3 cut(s) 21, 803, 923
HpySE526I ACGT 1 cut(s) 253
Hsp92II CATG 6 cut(s) 163, 394, 430, 509, 796, 845
Kzo9I GATC 7 cut(s) 61, 79, 83, 385, 730, 734, 1021
Lsp1109I GCAGC 5 cut(s) 541, 550, 553, 872, 1016
LweI GCATC 2 cut(s) 292, 550
MaeII ACGT 1 cut(s) 253
MaeIII GTNAC 1 cut(s) 155
MalI GATC 7 cut(s) 63, 81, 85, 387, 732, 736, 1023
MboI GATC 7 cut(s) 61, 79, 83, 385, 730, 734, 1021
MboII GAAGA 4 cut(s) 64, 523, 644, 791
MflI RGATCY 1 cut(s) 1021
MhlI GDGCHC 2 cut(s) 217, 770
MlsI TGGCCA 1 cut(s) 905
MluCI AATT 7 cut(s) 137, 230, 343, 515, 541, 679, 739
MluNI TGGCCA 1 cut(s) 905
MlyI GAGTC 3 cut(s) 217, 506, 818
Mox20I TGGCCA 1 cut(s) 905
MroXI GAANNNNTTC 1 cut(s) 515
MscI TGGCCA 1 cut(s) 905
MseI TTAA 7 cut(s) 140, 237, 282, 342, 576, 705, 849
MslI CAYNNNNRTG 3 cut(s) 425, 441, 899
Msp20I TGGCCA 1 cut(s) 905
MspA1I CMGCKG 1 cut(s) 746
MspI CCGG 1 cut(s) 145
Mva1269I GAATGC 1 cut(s) 836
MvnI CGCG 2 cut(s) 60, 120
MwoI GCNNNNNNNGC 3 cut(s) 560, 563, 592
NdeII GATC 7 cut(s) 61, 79, 83, 385, 730, 734, 1021
NlaIII CATG 6 cut(s) 163, 394, 430, 509, 796, 845
NmeAIII GCCGAG 1 cut(s) 637
NmuCI GTSAC 1 cut(s) 155
OliI CACNNNNGTG 1 cut(s) 441
PaeR7I CTCGAG 2 cut(s) 769, 1017
PagI TCATGA 1 cut(s) 792
PcsI WCGNNNNNNNCGW 1 cut(s) 183
PctI GAATGC 1 cut(s) 836
PdmI GAANNNNTTC 1 cut(s) 515
PfeI GAWTC 5 cut(s) 110, 169, 671, 787, 796
PkrI GCNGC 5 cut(s) 556, 565, 568, 862, 1006
Ple19I CGATCG 1 cut(s) 82
PleI GAGTC 3 cut(s) 217, 505, 817
PpsI GAGTC 3 cut(s) 217, 505, 817
PshAI GACNNNNGTC 1 cut(s) 981
Psp124BI GAGCTC 1 cut(s) 770
PspXI VCTCGAGB 1 cut(s) 769
PstNI CAGNNNCTG 1 cut(s) 197
PsuI RGATCY 1 cut(s) 1021
PvuI CGATCG 1 cut(s) 82
PvuII CAGCTG 1 cut(s) 746
RseI CAYNNNNRTG 3 cut(s) 425, 441, 899
SacI GAGCTC 1 cut(s) 770
SaqAI TTAA 7 cut(s) 140, 237, 282, 342, 576, 705, 849
SatI GCNGC 5 cut(s) 555, 564, 567, 861, 1005
Sau3AI GATC 7 cut(s) 61, 79, 83, 385, 730, 734, 1021
SchI GAGTC 3 cut(s) 217, 506, 818
SduI GDGCHC 2 cut(s) 217, 770
SfaNI GCATC 2 cut(s) 292, 550
SfcI CTRYAG 1 cut(s) 326
Sfr274I CTCGAG 2 cut(s) 769, 1017
SlaI CTCGAG 2 cut(s) 769, 1017
SmiMI CAYNNNNRTG 3 cut(s) 425, 441, 899
SmlI CTYRAG 4 cut(s) 225, 769, 781, 1017
SmoI CTYRAG 4 cut(s) 225, 769, 781, 1017
Sse9I AATT 7 cut(s) 137, 230, 343, 515, 541, 679, 739
SsiI CCGC 3 cut(s) 58, 134, 881
SstI GAGCTC 1 cut(s) 770
TaaI ACNGT 3 cut(s) 219, 351, 607
TaiI ACGT 1 cut(s) 256
TaqI TCGA 8 cut(s) 49, 82, 167, 414, 546, 733, 770, 1018
TasI AATT 7 cut(s) 137, 230, 343, 515, 541, 679, 739
TfiI GAWTC 5 cut(s) 110, 169, 671, 787, 796
Tru1I TTAA 7 cut(s) 140, 237, 282, 342, 576, 705, 849
Tru9I TTAA 7 cut(s) 140, 237, 282, 342, 576, 705, 849
TseFI GTSAC 1 cut(s) 155
TseI GCWGC 5 cut(s) 554, 563, 566, 860, 1004
Tsp45I GTSAC 1 cut(s) 155
TspDTI ATGAA 4 cut(s) 17, 176, 645, 809
TspGWI ACGGA 2 cut(s) 143, 455
VneI GTGCAC 1 cut(s) 213
XapI RAATTY 4 cut(s) 230, 515, 541, 739
XhoI CTCGAG 2 cut(s) 769, 1017
XmiI GTMKAC 1 cut(s) 602
XmnI GAANNNNTTC 1 cut(s) 515
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.