AT2G27680

Aldo/keto reductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0002803
Physical Location & Seq
Reverse (-)
11803743 .. 11806087
2345 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G27680.1

Sequence Viewer

Length: 1155 bp
ATGCCTGTGTCCGTACATTCCGTTATCGCCACGAACCTAGCCACTACACTATCATCGAATTACCGGAATGTTTCTCGCCGTAGAACTATCTCCACCTCTGTGAATTGTTCGGTGGAGATTACGGAGGCTGATCGGTCGGTGAAACTGAAGAACGGGAACGATTCACTGGAGATATGCAGAGTTCTCAACGGGATGTGGCAAACGAGCGGAGGATGGGGGAAGATTGATCGAAACGACGCCGTTGATTCAATGCTTCGTTACGCCGATGCTGGTCTCTCTACTTTCGATATGGCTGATCACTATGGTCCTGCTGAAGATCTTTACGGTATTTTTATCAATAGAGTTCGTCGAGAGCGTCCACCGGAGTACTTGGAGAAGATTAAAGGTTTGACAAAATGGGTGCCTCCTCCAATAAAGATGACAAGTAGCTATGTTCGTCAGAACATCGATATATCGAGGAAGAGAATGGATGTGGCTGCTCTTGATATGCTTCAGTTTCACTGGTGGGATTATGCGAATGACGGCTATCTTGATGCACTGAAACATCTCACAGACTTGAAGGAAGAAGGGAAAATCAAGACTGTTGCTTTGACTAATTTTGATACAGAGAGACTTCAGAAAATCTTAGAGAATGGAATCCCTGTCGTTAGCAATCAGGTGCAACACTCCATCGTAGACATGCGTCCTCAACAGAGAATGGCTCAGCTTTGCGAGCTTACAGGGGTCAAACTTATAACATATGGGACAGTTATGGGTGGTCTCTTGTCAGAGAAGTTTCTTGATACCAATCTAACAATCCCTTTTGCTGGCCCTCGCTTGAATACTCCATCTCTCCAAAAATACAAAAGGATGGTTGATGCATGGGGAGGGTGGAATCTATTTCAAGGTTTACTTCGAACAATGAAGACCATATCCACAAAACATGGAGTCTCTATACCAACAGTGGCTGTGAGATATGTACTAGATCAGCAAGGAGTTGGTGGATCAATGATTGGAGTGAGACTCGGGTTAGCGGAACACATACAAGACGCAAATGCTATATTCTCATTGGTATTGGATGAAGAAGATGTTAATAGCATACAAGAGGTTACCAAGAAAGGTAAAGATCTTCTCCAAGTGATTGGTGACTGCGGAGACGAATACCGACGTATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

384

Amino Acids

43.15

Weight (kDa)

8.21

Isoelectric Point (pI)

35.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 62 - 363 4.8e-67 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 734
AccB1I GGYRCC 1 cut(s) 400
AccBSI CCGCTC 1 cut(s) 207
AccI GTMKAC 1 cut(s) 675
AciI CCGC 3 cut(s) 207, 1013, 1131
AclWI GGATC 1 cut(s) 991
AcuI CTGAAG 4 cut(s) 167, 333, 476, 599
AcyI GRCGYC 1 cut(s) 237
AfaI GTAC 3 cut(s) 15, 368, 960
AfiI CCNNNNNNNGG 1 cut(s) 806
AgsI TTSAA 4 cut(s) 249, 559, 820, 884
AleI CACNNNNGTG 1 cut(s) 98
AluBI AGCT 3 cut(s) 429, 706, 715
AluI AGCT 3 cut(s) 429, 706, 715
Alw26I GTCTC 6 cut(s) 278, 604, 764, 934, 994, 1128
AlwI GGATC 1 cut(s) 991
AlwNI CAGNNNCTG 1 cut(s) 947
Ama87I CYCGRG 1 cut(s) 1004
AoxI GGCC 1 cut(s) 808
ApeKI GCWGC 1 cut(s) 476
ArsI GACNNNNNNTTYG 2 cut(s) 571, 603
AspS9I GGNCC 2 cut(s) 305, 809
AsuHPI GGTGA 2 cut(s) 151, 1136
AsuII TTCGAA 1 cut(s) 895
AvaI CYCGRG 1 cut(s) 1004
AvaII GGWCC 1 cut(s) 305
BanI GGYRCC 1 cut(s) 400
BbsI GAAGAC 1 cut(s) 911
BbvI GCAGC 1 cut(s) 463
BccI CCATC 4 cut(s) 207, 677, 835, 844
BceAI ACGGC 3 cut(s) 63, 224, 538
BclI TGATCA 1 cut(s) 295
BcoDI GTCTC 6 cut(s) 278, 604, 764, 934, 994, 1128
BfaI CTAG 2 cut(s) 38, 962
BglII AGATCT 2 cut(s) 316, 1105
BisI GCNGC 1 cut(s) 477
BlpI GCTNAGC 1 cut(s) 702
BlsI GCNGC 1 cut(s) 478
BmcAI AGTACT 1 cut(s) 368
Bme18I GGWCC 1 cut(s) 305
BmeT110I CYCGRG 1 cut(s) 1004
BmgT120I GGNCC 2 cut(s) 305, 809
BmiI GGNNCC 1 cut(s) 402
BmsI GCATC 3 cut(s) 256, 523, 847
BoxI GACNNNNGTC 1 cut(s) 681
BpiI GAAGAC 1 cut(s) 911
BplI GAGNNNNNCTC 4 cut(s) 685, 717, 987, 1019
BpmI CTGGAG 1 cut(s) 188
Bpu1102I GCTNAGC 1 cut(s) 702
Bpu14I TTCGAA 1 cut(s) 895
Bsa29I ATCGAT 1 cut(s) 447
BsaBI GATNNNNATC 1 cut(s) 786
BsaHI GRCGYC 1 cut(s) 237
BsaI GGTCTC 2 cut(s) 278, 764
BsaWI WCCGGW 2 cut(s) 63, 361
Bsc4I CCNNNNNNNGG 1 cut(s) 806
Bse1I ACTGG 2 cut(s) 171, 506
Bse8I GATNNNNATC 1 cut(s) 786
BseCI ATCGAT 1 cut(s) 447
BseGI GGATG 5 cut(s) 198, 218, 475, 855, 1063
BseJI GATNNNNATC 1 cut(s) 786
BseLI CCNNNNNNNGG 1 cut(s) 806
BseMII CTCAG 1 cut(s) 716
BseNI ACTGG 2 cut(s) 171, 506
BseRI GAGGAG 1 cut(s) 396
BseXI GCAGC 1 cut(s) 463
Bsh1285I CGRYCG 1 cut(s) 137
BshFI GGCC 1 cut(s) 810
BshNI GGYRCC 1 cut(s) 400
BshVI ATCGAT 1 cut(s) 447
BsiEI CGRYCG 1 cut(s) 137
BsiHKCI CYCGRG 1 cut(s) 1004
BsiSI CCGG 2 cut(s) 64, 362
BslFI GGGAC 1 cut(s) 757
BslI CCNNNNNNNGG 1 cut(s) 806
BsmAI GTCTC 6 cut(s) 278, 604, 764, 934, 994, 1128
BsmBI CGTCTC 1 cut(s) 1128
BsmFI GGGAC 1 cut(s) 757
BsnI GGCC 1 cut(s) 810
Bso31I GGTCTC 2 cut(s) 278, 764
BsoBI CYCGRG 1 cut(s) 1004
Bsp119I TTCGAA 1 cut(s) 895
Bsp143I GATC 7 cut(s) 130, 226, 295, 316, 964, 983, 1105
Bsp1720I GCTNAGC 1 cut(s) 702
BspACI CCGC 3 cut(s) 207, 1013, 1131
BspANI GGCC 1 cut(s) 810
BspCNI CTCAG 1 cut(s) 715
BspDI ATCGAT 1 cut(s) 447
BspLI GGNNCC 1 cut(s) 402
BspPI GGATC 1 cut(s) 991
BspT104I TTCGAA 1 cut(s) 895
BspT107I GGYRCC 1 cut(s) 400
BspTNI GGTCTC 2 cut(s) 278, 764
BsrBI CCGCTC 1 cut(s) 207
BsrI ACTGG 2 cut(s) 171, 506
BssMI GATC 7 cut(s) 130, 226, 295, 316, 964, 983, 1105
BssNI GRCGYC 1 cut(s) 237
Bst4CI ACNGT 4 cut(s) 326, 583, 748, 943
Bst6I CTCTTC 1 cut(s) 455
BstACI GRCGYC 1 cut(s) 237
BstBI TTCGAA 1 cut(s) 895
BstC8I GCNNGC 2 cut(s) 713, 808
BstDEI CTNAG 2 cut(s) 625, 702
BstEII GGTNACC 1 cut(s) 1087
BstF5I GGATG 5 cut(s) 198, 218, 475, 855, 1063
BstKTI GATC 7 cut(s) 133, 229, 298, 319, 967, 986, 1108
BstMAI GTCTC 6 cut(s) 278, 604, 764, 934, 994, 1128
BstMBI GATC 7 cut(s) 130, 226, 295, 316, 964, 983, 1105
BstMCI CGRYCG 1 cut(s) 137
BstMWI GCNNNNNNNGC 1 cut(s) 712
BstNSI RCATGY 1 cut(s) 682
BstPAI GACNNNNGTC 1 cut(s) 681
BstPI GGTNACC 1 cut(s) 1087
BstV1I GCAGC 1 cut(s) 463
BstV2I GAAGAC 1 cut(s) 911
BstX2I RGATCY 2 cut(s) 316, 1105
BstXI CCANNNNNNTGG 1 cut(s) 1121
BstYI RGATCY 2 cut(s) 316, 1105
Bsu15I ATCGAT 1 cut(s) 447
BsuRI GGCC 1 cut(s) 810
BsuTUI ATCGAT 1 cut(s) 447
BtsCI GGATG 5 cut(s) 198, 218, 475, 855, 1063
BtsIMutI CAGTG 4 cut(s) 164, 499, 536, 948
Cac8I GCNNGC 2 cut(s) 713, 808
CaiI CAGNNNCTG 1 cut(s) 947
Cfr13I GGNCC 2 cut(s) 305, 809
ClaI ATCGAT 1 cut(s) 447
CseI GACGC 4 cut(s) 245, 344, 671, 1037
Csp6I GTAC 3 cut(s) 14, 367, 959
CviAII CATG 3 cut(s) 679, 861, 923
CviQI GTAC 3 cut(s) 14, 367, 959
DdeI CTNAG 2 cut(s) 625, 702
DpnI GATC 7 cut(s) 132, 228, 297, 318, 966, 985, 1107
DpnII GATC 7 cut(s) 130, 226, 295, 316, 964, 983, 1105
Eam1104I CTCTTC 1 cut(s) 455
EarI CTCTTC 1 cut(s) 455
Eco31I GGTCTC 2 cut(s) 278, 764
Eco47I GGWCC 1 cut(s) 305
Eco57I CTGAAG 4 cut(s) 167, 333, 476, 599
Eco88I CYCGRG 1 cut(s) 1004
Eco91I GGTNACC 1 cut(s) 1087
EcoO65I GGTNACC 1 cut(s) 1087
EcoT22I ATGCAT 1 cut(s) 862
Esp3I CGTCTC 1 cut(s) 1128
FaeI CATG 3 cut(s) 682, 864, 926
FalI AAGNNNNNCTT 2 cut(s) 876, 908
FaqI GGGAC 1 cut(s) 757
FatI CATG 3 cut(s) 678, 860, 922
FauNDI CATATG 1 cut(s) 739
FbaI TGATCA 1 cut(s) 295
FblI GTMKAC 1 cut(s) 675
Fnu4HI GCNGC 1 cut(s) 477
FokI GGATG 5 cut(s) 205, 225, 482, 862, 1070
Fsp4HI GCNGC 1 cut(s) 477
FspBI CTAG 2 cut(s) 38, 962
GluI GCNGC 1 cut(s) 477
GsuI CTGGAG 1 cut(s) 188
HaeIII GGCC 1 cut(s) 810
HapII CCGG 2 cut(s) 64, 362
HgaI GACGC 4 cut(s) 245, 344, 671, 1037
Hin1I GRCGYC 1 cut(s) 237
Hin1II CATG 3 cut(s) 682, 864, 926
HinfI GANTC 6 cut(s) 161, 245, 636, 874, 927, 1002
HpaII CCGG 2 cut(s) 64, 362
HphI GGTGA 2 cut(s) 151, 1136
Hpy166II GTNNAC 3 cut(s) 359, 676, 890
Hpy188I TCNGA 3 cut(s) 441, 618, 769
Hpy188III TCNNGA 5 cut(s) 350, 482, 530, 577, 779
Hpy8I GTNNAC 3 cut(s) 359, 676, 890
Hpy99I CGWCG 3 cut(s) 239, 351, 1149
HpyAV CCTTC 2 cut(s) 553, 560
HpyCH4III ACNGT 4 cut(s) 326, 583, 748, 943
HpyCH4IV ACGT 1 cut(s) 1147
HpyCH4V TGCA 4 cut(s) 177, 536, 661, 860
HpyF10VI GCNNNNNNNGC 1 cut(s) 712
HpyF3I CTNAG 2 cut(s) 625, 702
HpySE526I ACGT 1 cut(s) 1147
Hsp92I GRCGYC 1 cut(s) 237
Hsp92II CATG 3 cut(s) 682, 864, 926
Ksp22I TGATCA 1 cut(s) 295
Kzo9I GATC 7 cut(s) 130, 226, 295, 316, 964, 983, 1105
Lsp1109I GCAGC 1 cut(s) 463
LweI GCATC 3 cut(s) 256, 523, 847
MaeI CTAG 2 cut(s) 38, 962
MaeII ACGT 1 cut(s) 1147
MaeIII GTNAC 3 cut(s) 257, 1087, 1124
MalI GATC 7 cut(s) 132, 228, 297, 318, 966, 985, 1107
MbiI CCGCTC 1 cut(s) 207
MboI GATC 7 cut(s) 130, 226, 295, 316, 964, 983, 1105
MflI RGATCY 2 cut(s) 316, 1105
MluCI AATT 3 cut(s) 58, 103, 595
MlyI GAGTC 2 cut(s) 936, 996
Mph1103I ATGCAT 1 cut(s) 862
MseI TTAA 2 cut(s) 381, 1071
MslI CAYNNNNRTG 1 cut(s) 98
MspI CCGG 2 cut(s) 64, 362
MwoI GCNNNNNNNGC 1 cut(s) 712
NdeI CATATG 1 cut(s) 739
NdeII GATC 7 cut(s) 130, 226, 295, 316, 964, 983, 1105
NlaIII CATG 3 cut(s) 682, 864, 926
NlaIV GGNNCC 1 cut(s) 402
NmuCI GTSAC 1 cut(s) 1124
NsiI ATGCAT 1 cut(s) 862
NspI RCATGY 1 cut(s) 682
NspV TTCGAA 1 cut(s) 895
OliI CACNNNNGTG 1 cut(s) 98
PcsI WCGNNNNNNNCGW 1 cut(s) 352
PfeI GAWTC 4 cut(s) 161, 245, 636, 874
PkrI GCNGC 1 cut(s) 478
PleI GAGTC 2 cut(s) 935, 996
PpsI GAGTC 2 cut(s) 935, 996
PshAI GACNNNNGTC 1 cut(s) 681
PsiI TTATAA 1 cut(s) 734
PspEI GGTNACC 1 cut(s) 1087
PspN4I GGNNCC 1 cut(s) 402
PspPI GGNCC 2 cut(s) 305, 809
PstNI CAGNNNCTG 1 cut(s) 947
PsuI RGATCY 2 cut(s) 316, 1105
RsaI GTAC 3 cut(s) 15, 368, 960
RsaNI GTAC 3 cut(s) 14, 367, 959
RseI CAYNNNNRTG 1 cut(s) 98
SaqAI TTAA 2 cut(s) 381, 1071
SatI GCNGC 1 cut(s) 477
Sau3AI GATC 7 cut(s) 130, 226, 295, 316, 964, 983, 1105
Sau96I GGNCC 2 cut(s) 305, 809
ScaI AGTACT 1 cut(s) 368
SchI GAGTC 2 cut(s) 936, 996
SfaNI GCATC 3 cut(s) 256, 523, 847
SfuI TTCGAA 1 cut(s) 895
SinI GGWCC 1 cut(s) 305
SmiMI CAYNNNNRTG 1 cut(s) 98
Sse9I AATT 3 cut(s) 58, 103, 595
SsiI CCGC 3 cut(s) 207, 1013, 1131
SspMI CTAG 2 cut(s) 38, 962
TaaI ACNGT 4 cut(s) 326, 583, 748, 943
TaiI ACGT 1 cut(s) 1150
TaqI TCGA 7 cut(s) 56, 229, 285, 349, 447, 455, 895
TaqII GACCGA 1 cut(s) 123
TasI AATT 3 cut(s) 58, 103, 595
TatI WGTACW 2 cut(s) 366, 958
TfiI GAWTC 4 cut(s) 161, 245, 636, 874
Tru1I TTAA 2 cut(s) 381, 1071
Tru9I TTAA 2 cut(s) 381, 1071
TscAI CASTG 4 cut(s) 171, 506, 543, 948
TseFI GTSAC 1 cut(s) 1124
TseI GCWGC 1 cut(s) 476
Tsp45I GTSAC 1 cut(s) 1124
TspDTI ATGAA 2 cut(s) 917, 1074
TspGWI ACGGA 2 cut(s) 10, 137
TspRI CASTG 4 cut(s) 171, 506, 543, 948
VpaK11BI GGWCC 1 cut(s) 305
XceI RCATGY 1 cut(s) 682
XmiI GTMKAC 1 cut(s) 675
XspI CTAG 2 cut(s) 38, 962
ZrmI AGTACT 1 cut(s) 368
Zsp2I ATGCAT 1 cut(s) 862
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.