Rh5BG369900

Aldo/keto reductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0002803
Physical Location & Seq
Reverse (-)
58075723 .. 58079820
4098 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG369900.1

Sequence Viewer

Length: 1146 bp
ATGGCAGAGTTGTTGGGTCATCATTCTCTAAGCAAATTCACGTTTGGTTCGATCACAAAGGGAAGAACTAAGAGGAGTCAGAAACACAGTTGGAGGCCAATTGGGTGTGTGTTAACTGAAGATAACAGACGAGTTGTGGTTAAGAATGGGAAGGATTCATTAGACATATGTAGAGTTGTGAATGGGATGTGGCAGACCAGCGGGGGCTGGGGTCGAATTGATAGAGACAATGCTGTTGATGCTATGCTTAAATATGCTGATGCTGGACTCACTACATTTGATATGGCAGATATATATGGACCAGCTGAGGATCTATATGGCATCTTTATCAATCGTGTTCGTAAGGAGCGACCACCAGAATTCTTGGAGAAGGTTAGAGGTCTCACAAAATGGGTGCCGCCACCTGTTAAGATGACAAGCAGTTTTGTGAGGGACAGTATAAATGTTTCAAGAAAGAGAATGGATGTGGCTTCCTTGGACATGCTTCAGTTTCATTGGTGGGATTACGCAAATTCGGGTTACCTTGATGCACTTAAACACCTTACAGATTTGAAAGACGAAGGTAAAATAAAGACCGTAGCTTTGACAAATTTTGATACCGAGAGATTACAGATAATCCTAGAAAATGAGATTCCTGTTGTAAGCAATCAGGTCCAACATTCGATTGTTGACATGCGTCCTCAACAGCAAATGGCAGAGCTTTGTCAGCTTACCGGAGTCAAACTTATAACGTATGGGACAGTAATGGGTGGTCTATTATCTGAAAAGTTCCTTGACACCAACTTGTCCATTCCGTTTGCTGGGCCTCCGTTAAACACTCCCTCCCTCCAAAAGTACAAACGGATGGTTGATGCCTGGGGAGGATGGAGTCTTTTTCAAACTCTTCTTCAGACACTCAAAAGAATTGCTTCTAAACATGGTGTCACAATCCCCAATGTTGCTGTGAAATACATACTAGATCAGCGAGGTGTGGCAGGATCAATGATAGGTGTTAGACTCGGGTTGTCAGAACATATCCAAGACTCTAATGCTGTGTTTTCACTTGCTCTTGATGAGGATGATATAAGCAGCATAGAAGAAGTCACAAAGAAAGGGAAGAATCTCCTTCAAGTTATTGGTGACTGCGGAGATGAATATAGGCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

381

Amino Acids

42.83

Weight (kDa)

8.7

Isoelectric Point (pI)

34.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 59 - 361 1.1e-72 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 728
AccB1I GGYRCC 1 cut(s) 394
AciI CCGC 3 cut(s) 201, 398, 1125
AclWI GGATC 2 cut(s) 318, 985
AcsI RAATTY 4 cut(s) 35, 359, 511, 589
AcuI CTGAAG 3 cut(s) 138, 470, 872
AfaI GTAC 1 cut(s) 836
AfiI CCNNNNNNNGG 1 cut(s) 800
AgsI TTSAA 4 cut(s) 450, 553, 878, 1109
AjnI CCWGG 1 cut(s) 854
AluBI AGCT 4 cut(s) 305, 581, 700, 709
AluI AGCT 4 cut(s) 305, 581, 700, 709
Alw26I GTCTC 2 cut(s) 219, 386
AlwI GGATC 2 cut(s) 318, 985
Ama87I CYCGRG 1 cut(s) 998
AoxI GGCC 2 cut(s) 95, 803
ApeKI GCWGC 1 cut(s) 1068
ApoI RAATTY 4 cut(s) 35, 359, 511, 589
ArsI GACNNNNNNTTYG 2 cut(s) 565, 597
Asp700I GAANNNNTTC 1 cut(s) 907
AspS9I GGNCC 3 cut(s) 299, 652, 803
AsuHPI GGTGA 1 cut(s) 1130
AvaI CYCGRG 1 cut(s) 998
AvaII GGWCC 2 cut(s) 299, 652
BanI GGYRCC 1 cut(s) 394
BbvCI CCTCAGC 1 cut(s) 306
BbvI GCAGC 1 cut(s) 1080
BccI CCATC 2 cut(s) 838, 858
BciT130I CCWGG 1 cut(s) 856
BcoDI GTCTC 2 cut(s) 219, 386
BfaI CTAG 2 cut(s) 620, 956
BisI GCNGC 2 cut(s) 398, 1069
BlsI GCNGC 2 cut(s) 399, 1070
Bme1390I CCNGG 1 cut(s) 856
Bme18I GGWCC 2 cut(s) 299, 652
BmeT110I CYCGRG 1 cut(s) 998
BmgT120I GGNCC 3 cut(s) 299, 652, 803
BmiI GGNNCC 1 cut(s) 396
BmrFI CCNGG 1 cut(s) 856
BmsI GCATC 5 cut(s) 229, 250, 330, 517, 841
BoxI GACNNNNGTC 1 cut(s) 675
Bpu10I CCTNAGC 1 cut(s) 306
BsaI GGTCTC 1 cut(s) 386
BsaJI CCNNGG 2 cut(s) 474, 855
BsaWI WCCGGW 1 cut(s) 713
BsaXI ACNNNNNCTCC 2 cut(s) 806, 836
Bsc4I CCNNNNNNNGG 1 cut(s) 800
BseBI CCWGG 1 cut(s) 856
BseDI CCNNGG 2 cut(s) 474, 855
BseGI GGATG 5 cut(s) 192, 469, 849, 869, 1063
BseLI CCNNNNNNNGG 1 cut(s) 800
BseMII CTCAG 1 cut(s) 297
BseRI GAGGAG 1 cut(s) 88
BseXI GCAGC 1 cut(s) 1080
BseYI CCCAGC 2 cut(s) 207, 800
BshFI GGCC 2 cut(s) 97, 805
BshNI GGYRCC 1 cut(s) 394
BsiHKCI CYCGRG 1 cut(s) 998
BsiSI CCGG 1 cut(s) 714
BslFI GGGAC 2 cut(s) 446, 751
BslI CCNNNNNNNGG 1 cut(s) 800
BsmAI GTCTC 2 cut(s) 219, 386
BsmFI GGGAC 2 cut(s) 446, 751
BsnI GGCC 2 cut(s) 97, 805
Bso31I GGTCTC 1 cut(s) 386
BsoBI CYCGRG 1 cut(s) 998
Bsp143I GATC 4 cut(s) 51, 310, 958, 977
BspACI CCGC 3 cut(s) 201, 398, 1125
BspANI GGCC 2 cut(s) 97, 805
BspCNI CTCAG 1 cut(s) 298
BspLI GGNNCC 1 cut(s) 396
BspPI GGATC 2 cut(s) 318, 985
BspT107I GGYRCC 1 cut(s) 394
BspTNI GGTCTC 1 cut(s) 386
BssECI CCNNGG 2 cut(s) 474, 855
BssMI GATC 4 cut(s) 51, 310, 958, 977
BssT1I CCWWGG 1 cut(s) 474
Bst2UI CCWGG 1 cut(s) 856
Bst4CI ACNGT 4 cut(s) 89, 437, 577, 742
Bst6I CTCTTC 1 cut(s) 888
BstDEI CTNAG 3 cut(s) 29, 69, 306
BstEII GGTNACC 1 cut(s) 518
BstF5I GGATG 5 cut(s) 192, 469, 849, 869, 1063
BstKTI GATC 4 cut(s) 54, 313, 961, 980
BstMAI GTCTC 2 cut(s) 219, 386
BstMBI GATC 4 cut(s) 51, 310, 958, 977
BstMWI GCNNNNNNNGC 2 cut(s) 239, 706
BstNI CCWGG 1 cut(s) 856
BstNSI RCATGY 2 cut(s) 484, 676
BstPAI GACNNNNGTC 1 cut(s) 675
BstPI GGTNACC 1 cut(s) 518
BstSCI CCNGG 1 cut(s) 854
BstV1I GCAGC 1 cut(s) 1080
BstX2I RGATCY 1 cut(s) 310
BstYI RGATCY 1 cut(s) 310
BsuRI GGCC 2 cut(s) 97, 805
BtsCI GGATG 5 cut(s) 192, 469, 849, 869, 1063
Cfr13I GGNCC 3 cut(s) 299, 652, 803
CseI GACGC 1 cut(s) 665
Csp6I GTAC 1 cut(s) 835
CviAII CATG 3 cut(s) 481, 673, 917
CviJI RGCY 8 cut(s) 97, 207, 305, 470, 581, 700, 709, 805
CviKI_1 RGCY 8 cut(s) 97, 207, 305, 470, 581, 700, 709, 805
CviQI GTAC 1 cut(s) 835
DdeI CTNAG 3 cut(s) 29, 69, 306
DpnI GATC 4 cut(s) 53, 312, 960, 979
DpnII GATC 4 cut(s) 51, 310, 958, 977
Eam1104I CTCTTC 1 cut(s) 888
EarI CTCTTC 1 cut(s) 888
Eco130I CCWWGG 1 cut(s) 474
Eco31I GGTCTC 1 cut(s) 386
Eco47I GGWCC 2 cut(s) 299, 652
Eco57I CTGAAG 3 cut(s) 138, 470, 872
Eco88I CYCGRG 1 cut(s) 998
Eco91I GGTNACC 1 cut(s) 518
EcoO65I GGTNACC 1 cut(s) 518
EcoRI GAATTC 1 cut(s) 359
EcoRII CCWGG 1 cut(s) 854
EcoT14I CCWWGG 1 cut(s) 474
ErhI CCWWGG 1 cut(s) 474
FaeI CATG 3 cut(s) 484, 676, 920
FalI AAGNNNNNCTT 2 cut(s) 892, 924
FaqI GGGAC 2 cut(s) 446, 751
FatI CATG 3 cut(s) 480, 672, 916
FauI CCCGC 1 cut(s) 194
FauNDI CATATG 1 cut(s) 167
Fnu4HI GCNGC 2 cut(s) 398, 1069
FokI GGATG 5 cut(s) 199, 476, 856, 876, 1070
Fsp4HI GCNGC 2 cut(s) 398, 1069
FspBI CTAG 2 cut(s) 620, 956
GluI GCNGC 2 cut(s) 398, 1069
GsaI CCCAGC 2 cut(s) 211, 804
HaeIII GGCC 2 cut(s) 97, 805
HapII CCGG 1 cut(s) 714
HgaI GACGC 1 cut(s) 665
Hin1II CATG 3 cut(s) 484, 676, 920
HincII GTYRAC 2 cut(s) 114, 670
HindII GTYRAC 2 cut(s) 114, 670
HinfI GANTC 9 cut(s) 76, 155, 267, 631, 717, 868, 996, 1022, 1099
HpaI GTTAAC 1 cut(s) 114
HpaII CCGG 1 cut(s) 714
HphI GGTGA 1 cut(s) 1130
Hpy166II GTNNAC 2 cut(s) 114, 670
Hpy188I TCNGA 4 cut(s) 81, 763, 891, 1009
Hpy188III TCNNGA 2 cut(s) 450, 1049
Hpy8I GTNNAC 2 cut(s) 114, 670
HpyAV CCTTC 4 cut(s) 145, 364, 554, 1115
HpyCH4III ACNGT 4 cut(s) 89, 437, 577, 742
HpyCH4IV ACGT 2 cut(s) 41, 731
HpyCH4V TGCA 1 cut(s) 530
HpyF10VI GCNNNNNNNGC 2 cut(s) 239, 706
HpyF3I CTNAG 3 cut(s) 29, 69, 306
HpySE526I ACGT 2 cut(s) 41, 731
Hsp92II CATG 3 cut(s) 484, 676, 920
KspAI GTTAAC 1 cut(s) 114
Kzo9I GATC 4 cut(s) 51, 310, 958, 977
LmnI GCTCC 1 cut(s) 346
Lsp1109I GCAGC 1 cut(s) 1080
LweI GCATC 5 cut(s) 229, 250, 330, 517, 841
MaeI CTAG 2 cut(s) 620, 956
MaeII ACGT 2 cut(s) 41, 731
MaeIII GTNAC 4 cut(s) 518, 922, 1081, 1118
MalI GATC 4 cut(s) 53, 312, 960, 979
MboI GATC 4 cut(s) 51, 310, 958, 977
MboII GAAGA 6 cut(s) 75, 131, 875, 878, 1088, 1108
MfeI CAATTG 1 cut(s) 99
MflI RGATCY 1 cut(s) 310
MluCI AATT 7 cut(s) 35, 99, 216, 359, 511, 589, 903
MlyI GAGTC 6 cut(s) 85, 261, 726, 877, 990, 1016
MmeI TCCRAC 2 cut(s) 71, 679
MroXI GAANNNNTTC 1 cut(s) 907
MseI TTAA 6 cut(s) 113, 141, 249, 408, 534, 812
MspA1I CMGCKG 2 cut(s) 201, 305
MspI CCGG 1 cut(s) 714
MspR9I CCNGG 1 cut(s) 856
MunI CAATTG 1 cut(s) 99
MvaI CCWGG 1 cut(s) 856
MwoI GCNNNNNNNGC 2 cut(s) 239, 706
NdeI CATATG 1 cut(s) 167
NdeII GATC 4 cut(s) 51, 310, 958, 977
NlaIII CATG 3 cut(s) 484, 676, 920
NlaIV GGNNCC 1 cut(s) 396
NmuCI GTSAC 3 cut(s) 922, 1081, 1118
NspI RCATGY 2 cut(s) 484, 676
PcsI WCGNNNNNNNCGW 2 cut(s) 47, 346
PdmI GAANNNNTTC 1 cut(s) 907
PfeI GAWTC 3 cut(s) 155, 631, 1099
PkrI GCNGC 2 cut(s) 399, 1070
PleI GAGTC 6 cut(s) 84, 261, 725, 876, 990, 1016
PpsI GAGTC 6 cut(s) 84, 261, 725, 876, 990, 1016
PshAI GACNNNNGTC 1 cut(s) 675
PsiI TTATAA 1 cut(s) 728
Psp6I CCWGG 1 cut(s) 854
PspEI GGTNACC 1 cut(s) 518
PspFI CCCAGC 2 cut(s) 207, 800
PspGI CCWGG 1 cut(s) 854
PspN4I GGNNCC 1 cut(s) 396
PspPI GGNCC 3 cut(s) 299, 652, 803
PsuI RGATCY 1 cut(s) 310
PvuII CAGCTG 1 cut(s) 305
RsaI GTAC 1 cut(s) 836
RsaNI GTAC 1 cut(s) 835
SaqAI TTAA 6 cut(s) 113, 141, 249, 408, 534, 812
SatI GCNGC 2 cut(s) 398, 1069
Sau3AI GATC 4 cut(s) 51, 310, 958, 977
Sau96I GGNCC 3 cut(s) 299, 652, 803
SchI GAGTC 6 cut(s) 85, 261, 726, 877, 990, 1016
ScrFI CCNGG 1 cut(s) 856
SfaNI GCATC 5 cut(s) 229, 250, 330, 517, 841
SinI GGWCC 2 cut(s) 299, 652
Sse9I AATT 7 cut(s) 35, 99, 216, 359, 511, 589, 903
SsiI CCGC 3 cut(s) 201, 398, 1125
SspMI CTAG 2 cut(s) 620, 956
StyD4I CCNGG 1 cut(s) 854
StyI CCWWGG 1 cut(s) 474
TaaI ACNGT 4 cut(s) 89, 437, 577, 742
TaiI ACGT 2 cut(s) 44, 734
TaqI TCGA 3 cut(s) 50, 214, 662
TasI AATT 7 cut(s) 35, 99, 216, 359, 511, 589, 903
TatI WGTACW 1 cut(s) 834
TauI GCSGC 1 cut(s) 400
TfiI GAWTC 3 cut(s) 155, 631, 1099
Tru1I TTAA 6 cut(s) 113, 141, 249, 408, 534, 812
Tru9I TTAA 6 cut(s) 113, 141, 249, 408, 534, 812
TseFI GTSAC 3 cut(s) 922, 1081, 1118
TseI GCWGC 1 cut(s) 1068
Tsp45I GTSAC 3 cut(s) 922, 1081, 1118
TspDTI ATGAA 3 cut(s) 147, 482, 1146
TspGWI ACGGA 3 cut(s) 783, 798, 856
VpaK11BI GGWCC 2 cut(s) 299, 652
XapI RAATTY 4 cut(s) 35, 359, 511, 589
XceI RCATGY 2 cut(s) 484, 676
XmnI GAANNNNTTC 1 cut(s) 907
XspI CTAG 2 cut(s) 620, 956
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.