RLG00000034944

Aldo/keto reductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0002803
Physical Location & Seq
Reverse (-)
57436871 .. 57440361
3491 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034944

Sequence Viewer

Length: 1167 bp
ATGGCAACTCTTCACTTACACAATCTCCTGCCCAATCCGACATTGTTCAACTCCAAAAACGCACCATTTTCAACTCCGCGCAGACTGCGGTCCAACTCGGTCAGGTGCGGCGGCGAGGCAACTCAGGTGAGCAGCAGCAGCGAGACCAACCGAGTCACAGTGAGTAACGGCAACGATTCGTTGGACATATGCCGAGTCCTGAACGGAATGTGGCAGACCAGCGGCGCCTGGGGCCGCATCGACCGAGACGACGCCGTTGAGGCCATGCTCCGCTACGCCGACGCCGGCCTCTCCACTTTCGACATGGCCGACCACTATGGACCAGCTGAAGATCTGTATGGCATCTTTATCAATCGTGTTCGTAAGGAGCGACCGCCAGAATTCTTGGAGAAGGTTAGAGGTCTCACAAAATGGGTGCCGCCACCAGTTAAGATGACAAGCAGTTTTGTGAGGGACAGTATAAATGTTTCAAGAAAGAGAATGGATGTGGCTTCCTTGGACATGCTTCAGTTTCATTGGTGGGATTACGCAAATTCGGGTTACCTTGATGCACTTAAACACCTTACAGATTTGAAAGACGAAGGTAAAATAAAGACCGTAGCTTTGACAAATTTTGATACCGAGAGATTACAGATAATCCTAGAAAATGAGATTCCTGTTGTAAGCAATCAGGTCCAACATTCGATTGTTGACATGCGTCCTCAACAGCAAATGGCAGAGCTTTGTCAGCTTACCGGAGTCAAACTTATAACGTATGGGACAGTAATGGGTGGTCTATTATCTGAAAAGTTCCTTGACACCAACTTGTCCATTCCGTTTGCTGGGCCTCCGTTAAACACTCCCTCCCTCCAAAAGTACAAACGGATGGTTGATGCCTGGGGAGGATGGAGTCTTTTTCAAACTCTTCTTCAGGCACTCAAAAGAATTGCTTCTAAACATGGTGTCACAATCCCCAATGTTGCTGTGAAATACATACTAGATCAGCGAGGTGTGGCAGGATCGATGATAGGTGTTAGACTCGGGTTGTCAGAACATATCCAAGACTCTAATGCTGTGTTTTCACTTGCTCTTGATGAGGATGATATAAGCAGCATAGAAGAAGTCACAAAGAAAGGGAAGAATCTCCTTCAAGTTATTGGTGACTGCGGAGATGAATATAGGCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

389

Amino Acids

43.36

Weight (kDa)

6.72

Isoelectric Point (pI)

36.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 67 - 368 1.9e-71 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 749
AccB1I GGYRCC 2 cut(s) 224, 415
AccII CGCG 1 cut(s) 79
AclWI GGATC 1 cut(s) 1006
AcoI YGGCCR 1 cut(s) 306
AcsI RAATTY 3 cut(s) 380, 532, 610
AcuI CTGAAG 3 cut(s) 348, 491, 893
AcyI GRCGYC 3 cut(s) 225, 252, 282
AfaI GTAC 1 cut(s) 857
AfiI CCNNNNNNNGG 1 cut(s) 821
AgsI TTSAA 6 cut(s) 49, 72, 471, 574, 899, 1130
AjnI CCWGG 2 cut(s) 227, 875
AluBI AGCT 4 cut(s) 326, 602, 721, 730
AluI AGCT 4 cut(s) 326, 602, 721, 730
Alw26I GTCTC 3 cut(s) 137, 240, 407
AlwI GGATC 1 cut(s) 1006
Ama87I CYCGRG 1 cut(s) 1019
AoxI GGCC 5 cut(s) 232, 261, 286, 306, 824
ApeKI GCWGC 4 cut(s) 132, 135, 138, 1089
ApoI RAATTY 3 cut(s) 380, 532, 610
ArsI GACNNNNNNTTYG 2 cut(s) 586, 618
Asp700I GAANNNNTTC 1 cut(s) 928
AspLEI GCGC 2 cut(s) 81, 227
AspS9I GGNCC 5 cut(s) 90, 232, 320, 673, 824
AsuHPI GGTGA 2 cut(s) 139, 1151
AvaI CYCGRG 1 cut(s) 1019
AvaII GGWCC 3 cut(s) 90, 320, 673
BanI GGYRCC 2 cut(s) 224, 415
BbvI GCAGC 4 cut(s) 144, 147, 150, 1101
BccI CCATC 2 cut(s) 859, 879
BceAI ACGGC 2 cut(s) 184, 239
BciT130I CCWGG 2 cut(s) 229, 877
BcoDI GTCTC 3 cut(s) 137, 240, 407
BfaI CTAG 2 cut(s) 641, 977
BfoI RGCGCY 1 cut(s) 228
BglI GCCNNNNNGGC 1 cut(s) 260
BglII AGATCT 1 cut(s) 331
BisI GCNGC 9 cut(s) 109, 112, 133, 136, 139, 223, 235, 419, 1090
BlsI GCNGC 9 cut(s) 110, 113, 134, 137, 140, 224, 236, 420, 1091
Bme1390I CCNGG 2 cut(s) 229, 877
Bme18I GGWCC 3 cut(s) 90, 320, 673
BmeT110I CYCGRG 1 cut(s) 1019
BmgT120I GGNCC 5 cut(s) 90, 232, 320, 673, 824
BmiI GGNNCC 3 cut(s) 226, 233, 417
BmrFI CCNGG 2 cut(s) 229, 877
BmsI GCATC 4 cut(s) 246, 351, 538, 862
BoxI GACNNNNGTC 2 cut(s) 88, 696
Bsa29I ATCGAT 1 cut(s) 1001
BsaHI GRCGYC 3 cut(s) 225, 252, 282
BsaI GGTCTC 2 cut(s) 137, 407
BsaJI CCNNGG 3 cut(s) 228, 495, 876
BsaWI WCCGGW 1 cut(s) 734
BsaXI ACNNNNNCTCC 4 cut(s) 9, 39, 827, 857
Bsc4I CCNNNNNNNGG 1 cut(s) 821
Bse118I RCCGGY 1 cut(s) 284
Bse1I ACTGG 1 cut(s) 425
BseBI CCWGG 2 cut(s) 229, 877
BseCI ATCGAT 1 cut(s) 1001
BseDI CCNNGG 3 cut(s) 228, 495, 876
BseGI GGATG 4 cut(s) 490, 870, 890, 1084
BseLI CCNNNNNNNGG 1 cut(s) 821
BseMII CTCAG 1 cut(s) 137
BseNI ACTGG 1 cut(s) 425
BseXI GCAGC 4 cut(s) 144, 147, 150, 1101
BseYI CCCAGC 1 cut(s) 821
Bsh1236I CGCG 1 cut(s) 79
Bsh1285I CGRYCG 2 cut(s) 244, 374
BshFI GGCC 5 cut(s) 234, 263, 288, 308, 826
BshNI GGYRCC 2 cut(s) 224, 415
BshVI ATCGAT 1 cut(s) 1001
BsiEI CGRYCG 2 cut(s) 244, 374
BsiHKCI CYCGRG 1 cut(s) 1019
BsiSI CCGG 2 cut(s) 285, 735
BslFI GGGAC 2 cut(s) 467, 772
BslI CCNNNNNNNGG 1 cut(s) 821
BsmAI GTCTC 3 cut(s) 137, 240, 407
BsmBI CGTCTC 1 cut(s) 240
BsmFI GGGAC 2 cut(s) 467, 772
BsnI GGCC 5 cut(s) 234, 263, 288, 308, 826
Bso31I GGTCTC 2 cut(s) 137, 407
BsoBI CYCGRG 1 cut(s) 1019
Bsp143I GATC 3 cut(s) 331, 979, 998
BspANI GGCC 5 cut(s) 234, 263, 288, 308, 826
BspCNI CTCAG 1 cut(s) 136
BspDI ATCGAT 1 cut(s) 1001
BspFNI CGCG 1 cut(s) 79
BspLI GGNNCC 3 cut(s) 226, 233, 417
BspPI GGATC 1 cut(s) 1006
BspT107I GGYRCC 2 cut(s) 224, 415
BspTNI GGTCTC 2 cut(s) 137, 407
BsrFI RCCGGY 1 cut(s) 284
BsrI ACTGG 1 cut(s) 425
BssAI RCCGGY 1 cut(s) 284
BssECI CCNNGG 3 cut(s) 228, 495, 876
BssMI GATC 3 cut(s) 331, 979, 998
BssNI GRCGYC 3 cut(s) 225, 252, 282
BssT1I CCWWGG 1 cut(s) 495
Bst2UI CCWGG 2 cut(s) 229, 877
Bst4CI ACNGT 4 cut(s) 160, 458, 598, 763
Bst6I CTCTTC 2 cut(s) 15, 909
BstACI GRCGYC 3 cut(s) 225, 252, 282
BstC8I GCNNGC 1 cut(s) 286
BstDEI CTNAG 1 cut(s) 123
BstEII GGTNACC 1 cut(s) 539
BstF5I GGATG 4 cut(s) 490, 870, 890, 1084
BstFNI CGCG 1 cut(s) 79
BstH2I RGCGCY 1 cut(s) 228
BstHHI GCGC 2 cut(s) 81, 227
BstKTI GATC 3 cut(s) 334, 982, 1001
BstMAI GTCTC 3 cut(s) 137, 240, 407
BstMBI GATC 3 cut(s) 331, 979, 998
BstMCI CGRYCG 2 cut(s) 244, 374
BstMWI GCNNNNNNNGC 5 cut(s) 85, 138, 231, 260, 727
BstNI CCWGG 2 cut(s) 229, 877
BstNSI RCATGY 2 cut(s) 505, 697
BstPAI GACNNNNGTC 2 cut(s) 88, 696
BstPI GGTNACC 1 cut(s) 539
BstSCI CCNGG 2 cut(s) 227, 875
BstUI CGCG 1 cut(s) 79
BstV1I GCAGC 4 cut(s) 144, 147, 150, 1101
BstX2I RGATCY 1 cut(s) 331
BstYI RGATCY 1 cut(s) 331
Bsu15I ATCGAT 1 cut(s) 1001
BsuRI GGCC 5 cut(s) 234, 263, 288, 308, 826
BsuTUI ATCGAT 1 cut(s) 1001
BtsCI GGATG 4 cut(s) 490, 870, 890, 1084
BtsIMutI CAGTG 1 cut(s) 165
Cac8I GCNNGC 1 cut(s) 286
CfoI GCGC 2 cut(s) 81, 227
Cfr10I RCCGGY 1 cut(s) 284
Cfr13I GGNCC 5 cut(s) 90, 232, 320, 673, 824
ClaI ATCGAT 1 cut(s) 1001
CseI GACGC 3 cut(s) 260, 290, 686
Csp6I GTAC 1 cut(s) 856
CviAII CATG 5 cut(s) 265, 304, 502, 694, 938
CviQI GTAC 1 cut(s) 856
DdeI CTNAG 1 cut(s) 123
DinI GGCGCC 1 cut(s) 226
DpnI GATC 3 cut(s) 333, 981, 1000
DpnII GATC 3 cut(s) 331, 979, 998
EaeI YGGCCR 1 cut(s) 306
Eam1104I CTCTTC 2 cut(s) 15, 909
EarI CTCTTC 2 cut(s) 15, 909
Eco130I CCWWGG 1 cut(s) 495
Eco31I GGTCTC 2 cut(s) 137, 407
Eco47I GGWCC 3 cut(s) 90, 320, 673
Eco57I CTGAAG 3 cut(s) 348, 491, 893
Eco88I CYCGRG 1 cut(s) 1019
Eco91I GGTNACC 1 cut(s) 539
EcoO65I GGTNACC 1 cut(s) 539
EcoRI GAATTC 1 cut(s) 380
EcoRII CCWGG 2 cut(s) 227, 875
EcoT14I CCWWGG 1 cut(s) 495
EgeI GGCGCC 1 cut(s) 226
EheI GGCGCC 1 cut(s) 226
ErhI CCWWGG 1 cut(s) 495
Esp3I CGTCTC 1 cut(s) 240
FaeI CATG 5 cut(s) 268, 307, 505, 697, 941
FalI AAGNNNNNCTT 2 cut(s) 913, 945
FaqI GGGAC 2 cut(s) 467, 772
FatI CATG 5 cut(s) 264, 303, 501, 693, 937
FauNDI CATATG 1 cut(s) 188
Fnu4HI GCNGC 9 cut(s) 109, 112, 133, 136, 139, 223, 235, 419, 1090
FokI GGATG 4 cut(s) 497, 877, 897, 1091
Fsp4HI GCNGC 9 cut(s) 109, 112, 133, 136, 139, 223, 235, 419, 1090
FspBI CTAG 2 cut(s) 641, 977
GlaI GCGC 2 cut(s) 80, 226
GluI GCNGC 9 cut(s) 109, 112, 133, 136, 139, 223, 235, 419, 1090
GsaI CCCAGC 1 cut(s) 825
HaeII RGCGCY 1 cut(s) 228
HaeIII GGCC 5 cut(s) 234, 263, 288, 308, 826
HapII CCGG 2 cut(s) 285, 735
HgaI GACGC 3 cut(s) 260, 290, 686
HhaI GCGC 2 cut(s) 81, 227
Hin1I GRCGYC 3 cut(s) 225, 252, 282
Hin1II CATG 5 cut(s) 268, 307, 505, 697, 941
Hin6I GCGC 2 cut(s) 79, 225
HinP1I GCGC 2 cut(s) 79, 225
HincII GTYRAC 1 cut(s) 691
HindII GTYRAC 1 cut(s) 691
HinfI GANTC 9 cut(s) 153, 176, 195, 652, 738, 889, 1017, 1043, 1120
HpaII CCGG 2 cut(s) 285, 735
HphI GGTGA 2 cut(s) 139, 1151
Hpy166II GTNNAC 1 cut(s) 691
Hpy188I TCNGA 3 cut(s) 39, 784, 1030
Hpy188III TCNNGA 3 cut(s) 199, 471, 1070
Hpy8I GTNNAC 1 cut(s) 691
Hpy99I CGWCG 2 cut(s) 254, 284
HpyAV CCTTC 3 cut(s) 385, 575, 1136
HpyCH4III ACNGT 4 cut(s) 160, 458, 598, 763
HpyCH4IV ACGT 1 cut(s) 752
HpyCH4V TGCA 1 cut(s) 551
HpyF10VI GCNNNNNNNGC 5 cut(s) 85, 138, 231, 260, 727
HpyF3I CTNAG 1 cut(s) 123
HpySE526I ACGT 1 cut(s) 752
Hsp92I GRCGYC 3 cut(s) 225, 252, 282
Hsp92II CATG 5 cut(s) 268, 307, 505, 697, 941
HspAI GCGC 2 cut(s) 79, 225
KasI GGCGCC 1 cut(s) 224
KroI GCCGGC 1 cut(s) 284
KroNI GCCGGC 1 cut(s) 286
Kzo9I GATC 3 cut(s) 331, 979, 998
LmnI GCTCC 2 cut(s) 273, 367
Lsp1109I GCAGC 4 cut(s) 144, 147, 150, 1101
LweI GCATC 4 cut(s) 246, 351, 538, 862
MaeI CTAG 2 cut(s) 641, 977
MaeII ACGT 1 cut(s) 752
MaeIII GTNAC 6 cut(s) 154, 164, 539, 943, 1102, 1139
MalI GATC 3 cut(s) 333, 981, 1000
MboI GATC 3 cut(s) 331, 979, 998
MboII GAAGA 5 cut(s) 341, 896, 899, 1109, 1129
MflI RGATCY 1 cut(s) 331
MluCI AATT 4 cut(s) 380, 532, 610, 924
Mly113I GGCGCC 1 cut(s) 225
MlyI GAGTC 6 cut(s) 162, 204, 747, 898, 1011, 1037
MmeI TCCRAC 4 cut(s) 62, 117, 162, 700
MroNI GCCGGC 1 cut(s) 284
MroXI GAANNNNTTC 1 cut(s) 928
MseI TTAA 3 cut(s) 429, 555, 833
MspA1I CMGCKG 2 cut(s) 222, 326
MspI CCGG 2 cut(s) 285, 735
MspR9I CCNGG 2 cut(s) 229, 877
MvaI CCWGG 2 cut(s) 229, 877
MvnI CGCG 1 cut(s) 79
MwoI GCNNNNNNNGC 5 cut(s) 85, 138, 231, 260, 727
NaeI GCCGGC 1 cut(s) 286
NarI GGCGCC 1 cut(s) 225
NdeI CATATG 1 cut(s) 188
NdeII GATC 3 cut(s) 331, 979, 998
NgoMIV GCCGGC 1 cut(s) 284
NlaIII CATG 5 cut(s) 268, 307, 505, 697, 941
NlaIV GGNNCC 3 cut(s) 226, 233, 417
NmeAIII GCCGAG 1 cut(s) 218
NmuCI GTSAC 4 cut(s) 154, 943, 1102, 1139
NspI RCATGY 2 cut(s) 505, 697
PcsI WCGNNNNNNNCGW 3 cut(s) 246, 306, 367
PdiI GCCGGC 1 cut(s) 286
PdmI GAANNNNTTC 1 cut(s) 928
PfeI GAWTC 3 cut(s) 176, 652, 1120
PkrI GCNGC 9 cut(s) 110, 113, 134, 137, 140, 224, 236, 420, 1091
PleI GAGTC 6 cut(s) 161, 203, 746, 897, 1011, 1037
PluTI GGCGCC 1 cut(s) 228
PpsI GAGTC 6 cut(s) 161, 203, 746, 897, 1011, 1037
PshAI GACNNNNGTC 2 cut(s) 88, 696
PsiI TTATAA 1 cut(s) 749
Psp6I CCWGG 2 cut(s) 227, 875
PspEI GGTNACC 1 cut(s) 539
PspFI CCCAGC 1 cut(s) 821
PspGI CCWGG 2 cut(s) 227, 875
PspN4I GGNNCC 3 cut(s) 226, 233, 417
PspPI GGNCC 5 cut(s) 90, 232, 320, 673, 824
PsuI RGATCY 1 cut(s) 331
PvuII CAGCTG 1 cut(s) 326
RsaI GTAC 1 cut(s) 857
RsaNI GTAC 1 cut(s) 856
SaqAI TTAA 3 cut(s) 429, 555, 833
SatI GCNGC 9 cut(s) 109, 112, 133, 136, 139, 223, 235, 419, 1090
Sau3AI GATC 3 cut(s) 331, 979, 998
Sau96I GGNCC 5 cut(s) 90, 232, 320, 673, 824
SchI GAGTC 6 cut(s) 162, 204, 747, 898, 1011, 1037
ScrFI CCNGG 2 cut(s) 229, 877
SfaNI GCATC 4 cut(s) 246, 351, 538, 862
SfoI GGCGCC 1 cut(s) 226
SinI GGWCC 3 cut(s) 90, 320, 673
Sse9I AATT 4 cut(s) 380, 532, 610, 924
SspDI GGCGCC 1 cut(s) 224
SspMI CTAG 2 cut(s) 641, 977
StyD4I CCNGG 2 cut(s) 227, 875
StyI CCWWGG 1 cut(s) 495
TaaI ACNGT 4 cut(s) 160, 458, 598, 763
TaiI ACGT 1 cut(s) 755
TaqI TCGA 4 cut(s) 240, 300, 683, 1001
TaqII GACCGA 2 cut(s) 88, 258
TasI AATT 4 cut(s) 380, 532, 610, 924
TatI WGTACW 1 cut(s) 855
TauI GCSGC 5 cut(s) 111, 114, 225, 237, 421
TfiI GAWTC 3 cut(s) 176, 652, 1120
Tru1I TTAA 3 cut(s) 429, 555, 833
Tru9I TTAA 3 cut(s) 429, 555, 833
TscAI CASTG 1 cut(s) 165
TseFI GTSAC 4 cut(s) 154, 943, 1102, 1139
TseI GCWGC 4 cut(s) 132, 135, 138, 1089
Tsp45I GTSAC 4 cut(s) 154, 943, 1102, 1139
TspDTI ATGAA 2 cut(s) 503, 1167
TspGWI ACGGA 4 cut(s) 219, 804, 819, 877
TspRI CASTG 1 cut(s) 165
VpaK11BI GGWCC 3 cut(s) 90, 320, 673
XapI RAATTY 3 cut(s) 380, 532, 610
XceI RCATGY 2 cut(s) 505, 697
XcmI CCANNNNNNNNNTGG 1 cut(s) 301
XmnI GAANNNNTTC 1 cut(s) 928
XspI CTAG 2 cut(s) 641, 977
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.