Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0002803

Physical Location & Seq

Genomic Coordinates Reverse (-)

9338745 .. 9343850

Gene Structure 5106 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G124700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1161 bp

ATGGCAACTTTACACTTACACAGCGTCCTACCCAATCCGACGTCGTTCAAATCCACCAAGGTCACGACTTCAACTCGGCGCAGGCTCCTAGCGAATTCGGTCAGGTGCGCCGAGGCAACTCAGGTCACCGGCGAGACCCAGCGAGTCACAGTGAGGAACGGGAACGATTCCCTGGACATATGCCGAGTCCTGAACGGAATGTGGCAGACGAGCGGTGGTTGGGGAAGAATCGACCGAGACGACGCCGTCGAGGCCATGCTTCGCTACGCTGATGCTGGACTCTCCACCTTCGACATGGCCGACCACTATGGACCGGCTGAAGATCTATATGGCATCTTTATCAATCGAGTTCGTCAGGAGCGTCCACCAGAATTCTTGGAGAAGGTCAGAGGTCTTACAAAATGGGTGCCACCACCTGTTAAGATGACAAGTAGTTACGTAAGGGACAGTATAAATGTTTCACGGAAGAGAATGGATGTGGCTTCCTTGGACATGCTTCAGTTTCATTGGTGGGATTATGCAAATACCGGTTACCTTGACGCACTAAAACACCTTACAGATTTGAAAGAAGAAGGTAAAATTAAGACCGTTGCCTTGACAAACTTCGACACAGAGAGACTACAGATAATCCTGGAAAATGAGATTCCTGTTGTCAGCAATCAGGTCCAACATTCAATTGTTGATATGCGTCCTCAACAGAAAATGGCAGAGCTTTGTCAGCTTACAGGAGTCAAACTCATAACGTATGGGACAGTAATGGGTGGTCTATTATCTGAAAAGTTCCTTGATACCAACTTAAACATTCCCTTTGCTGGGCCTCCACTAAATACTCCCTCACTCCAGAAGTACAAACGGATGGTCGATGCCTGGGGAGGATGGAGTCTCTTTCAAGCCCTGCTTCAGACACTCAAAGGAATTGCTTCAAAACATGGAGCCACAATCCCCAATGTTGCCGTGAAATACATATTAGATCAGCAAGCTGTGGCAGGATCGATGATAGGTGTTAGACTTGGGTTGTCAGAACACATCCAAGACTCCAATGCTGTGTTTTCACTTGCTCTTGATGAGGATGATATAAGCAGTATACAAGAAGTCACAAAGAAAGGGAAGAATCTTCTTAAAGTGATTGGTGACTGCGGAGATGAATACAGGCGTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Aldo_ket_red

Protein Analysis

387

Amino Acids

43.11

Weight (kDa)

7.69

Isoelectric Point (pI)

32.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002803)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27680
fragaria_vesca	FvH4_3g29620 FvH4_3g29620 FvH4_3g29620 FvH4_3g29620 FvH4_3g29620 FvH4_3g29620 FvH4_3g29620
malus_domestica	MD03G1139700.v1.1 MD11G1162100.v1.1
prunus_persica	Prupe.6G124700_v2.0.a1 Prupe.6G124700_v2.0.a1 Prupe.6G124700_v2.0.a1
pyrus_communis	pycom03g09470 pycom11g13190
rosa_chinensis	RchiOBHm_Chr5g0054671 RchiOBHm_Chr5g0054681 RchiOBHm_Chr5g0054781 RchiOBHm_Chr5g0054911
rosa_laevigata	RLG00000034944
rosa_multiflora	Rmu_sc0001552.1_g000054 Rmu_sc0002028.1_g000015 Rmu_sc0002371.1_g000026 Rmu_sc0004018.1_g000009 Rmu_sc0012706.1_g000003
rosa_roxburghii	Rroxscaffold_1G00025640 Rroxscaffold_1G00025800 Rroxscaffold_1G00026090 Rroxscaffold_1G00026220
rosa_rugosa	Rorug05G0287800 Rorug05G0288300 Rorug05G0289300 Rorug05G0289400
rosa_samantha	Rh5AG358700 Rh5AG359100 Rh5BG369900 Rh5CG392500 Rh5DG383500
rosa_wichuraiana	Rw5G033810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	245
AatII	GACGTC	1 cut(s)	44
AccB1I	GGYRCC	1 cut(s)	406
AccBSI	CCGCTC	1 cut(s)	213
AccI	GTMKAC	1 cut(s)	1084
AciI	CCGC	2 cut(s)	213, 1137
AclWI	GGATC	1 cut(s)	997
AcoI	YGGCCR	1 cut(s)	297
AcsI	RAATTY	2 cut(s)	94, 371
AcuI	CTGAAG	3 cut(s)	339, 482, 884
AcyI	GRCGYC	2 cut(s)	41, 243
AfaI	GTAC	1 cut(s)	848
AfiI	CCNNNNNNNGG	2 cut(s)	812, 813
AgeI	ACCGGT	1 cut(s)	527
AgsI	TTSAA	6 cut(s)	49, 72, 565, 675, 890, 924
AjnI	CCWGG	3 cut(s)	171, 630, 866
AluBI	AGCT	3 cut(s)	712, 721, 980
AluI	AGCT	3 cut(s)	712, 721, 980
Alw26I	GTCTC	4 cut(s)	128, 231, 610, 887
AlwI	GGATC	1 cut(s)	997
AoxI	GGCC	3 cut(s)	252, 297, 815
ApoI	RAATTY	2 cut(s)	94, 371
ArsI	GACNNNNNNTTYG	2 cut(s)	843, 875
AsiGI	ACCGGT	1 cut(s)	527
Asp700I	GAANNNNTTC	1 cut(s)	919
AspLEI	GCGC	2 cut(s)	81, 110
AspS9I	GGNCC	3 cut(s)	311, 664, 815
AsuHPI	GGTGA	2 cut(s)	118, 1142
AvaII	GGWCC	2 cut(s)	311, 664
BanI	GGYRCC	1 cut(s)	406
BccI	CCATC	2 cut(s)	850, 870
BceAI	ACGGC	2 cut(s)	230, 938
BciT130I	CCWGG	3 cut(s)	173, 632, 868
BcoDI	GTCTC	4 cut(s)	128, 231, 610, 887
BfaI	CTAG	1 cut(s)	89
BfmI	CTRYAG	1 cut(s)	620
BglI	GCCNNNNNGGC	1 cut(s)	251
BglII	AGATCT	1 cut(s)	322
Bme1390I	CCNGG	3 cut(s)	173, 632, 868
Bme18I	GGWCC	2 cut(s)	311, 664
BmgT120I	GGNCC	3 cut(s)	311, 664, 815
BmiI	GGNNCC	3 cut(s)	86, 408, 934
BmrFI	CCNGG	3 cut(s)	173, 632, 868
BmsI	GCATC	3 cut(s)	262, 342, 853
BplI	GAGNNNNNCTC	2 cut(s)	720, 752
BpmI	CTGGAG	1 cut(s)	824
Bsa29I	ATCGAT	1 cut(s)	992
BsaAI	YACGTR	1 cut(s)	439
BsaHI	GRCGYC	2 cut(s)	41, 243
BsaI	GGTCTC	1 cut(s)	128
BsaJI	CCNNGG	5 cut(s)	57, 111, 171, 486, 867
BsaWI	WCCGGW	1 cut(s)	527
Bsc4I	CCNNNNNNNGG	2 cut(s)	812, 813
Bse118I	RCCGGY	3 cut(s)	128, 313, 527
BseBI	CCWGG	3 cut(s)	173, 632, 868
BseCI	ATCGAT	1 cut(s)	992
BseDI	CCNNGG	5 cut(s)	57, 111, 171, 486, 867
BseGI	GGATG	5 cut(s)	481, 861, 881, 1026, 1075
BseLI	CCNNNNNNNGG	2 cut(s)	812, 813
BseMII	CTCAG	1 cut(s)	134
BseYI	CCCAGC	2 cut(s)	138, 812
Bsh1285I	CGRYCG	1 cut(s)	235
BshFI	GGCC	3 cut(s)	254, 299, 817
BshNI	GGYRCC	1 cut(s)	406
BshTI	ACCGGT	1 cut(s)	527
BshVI	ATCGAT	1 cut(s)	992
BsiEI	CGRYCG	1 cut(s)	235
BsiSI	CCGG	3 cut(s)	129, 314, 528
BslFI	GGGAC	2 cut(s)	458, 763
BslI	CCNNNNNNNGG	2 cut(s)	812, 813
BsmAI	GTCTC	4 cut(s)	128, 231, 610, 887
BsmBI	CGTCTC	1 cut(s)	231
BsmFI	GGGAC	2 cut(s)	458, 763
BsnI	GGCC	3 cut(s)	254, 299, 817
Bso31I	GGTCTC	1 cut(s)	128
Bsp143I	GATC	3 cut(s)	322, 970, 989
BspACI	CCGC	2 cut(s)	213, 1137
BspANI	GGCC	3 cut(s)	254, 299, 817
BspCNI	CTCAG	1 cut(s)	133
BspDI	ATCGAT	1 cut(s)	992
BspLI	GGNNCC	3 cut(s)	86, 408, 934
BspPI	GGATC	1 cut(s)	997
BspT107I	GGYRCC	1 cut(s)	406
BspTNI	GGTCTC	1 cut(s)	128
BsrBI	CCGCTC	1 cut(s)	213
BsrFI	RCCGGY	3 cut(s)	128, 313, 527
BssAI	RCCGGY	3 cut(s)	128, 313, 527
BssECI	CCNNGG	5 cut(s)	57, 111, 171, 486, 867
BssMI	GATC	3 cut(s)	322, 970, 989
BssNAI	GTATAC	1 cut(s)	1085
BssNI	GRCGYC	2 cut(s)	41, 243
BssT1I	CCWWGG	2 cut(s)	57, 486
Bst1107I	GTATAC	1 cut(s)	1085
Bst2UI	CCWGG	3 cut(s)	173, 632, 868
Bst4CI	ACNGT	4 cut(s)	151, 449, 589, 754
Bst6I	CTCTTC	1 cut(s)	461
BstACI	GRCGYC	2 cut(s)	41, 243
BstBAI	YACGTR	1 cut(s)	439
BstC8I	GCNNGC	3 cut(s)	83, 978, 1155
BstDEI	CTNAG	1 cut(s)	120
BstEII	GGTNACC	2 cut(s)	124, 530
BstF5I	GGATG	5 cut(s)	481, 861, 881, 1026, 1075
BstHHI	GCGC	2 cut(s)	81, 110
BstKTI	GATC	3 cut(s)	325, 973, 992
BstMAI	GTCTC	4 cut(s)	128, 231, 610, 887
BstMBI	GATC	3 cut(s)	322, 970, 989
BstMCI	CGRYCG	1 cut(s)	235
BstMWI	GCNNNNNNNGC	2 cut(s)	251, 718
BstNI	CCWGG	3 cut(s)	173, 632, 868
BstNSI	RCATGY	1 cut(s)	496
BstPI	GGTNACC	2 cut(s)	124, 530
BstSCI	CCNGG	3 cut(s)	171, 630, 866
BstSFI	CTRYAG	1 cut(s)	620
BstSNI	TACGTA	1 cut(s)	439
BstX2I	RGATCY	1 cut(s)	322
BstYI	RGATCY	1 cut(s)	322
BstZ17I	GTATAC	1 cut(s)	1085
Bsu15I	ATCGAT	1 cut(s)	992
BsuRI	GGCC	3 cut(s)	254, 299, 817
BsuTUI	ATCGAT	1 cut(s)	992
BtsCI	GGATG	5 cut(s)	481, 861, 881, 1026, 1075
BtsIMutI	CAGTG	1 cut(s)	156
Cac8I	GCNNGC	3 cut(s)	83, 978, 1155
CfoI	GCGC	2 cut(s)	81, 110
Cfr10I	RCCGGY	3 cut(s)	128, 313, 527
Cfr13I	GGNCC	3 cut(s)	311, 664, 815
ClaI	ATCGAT	1 cut(s)	992
CseI	GACGC	5 cut(s)	13, 251, 350, 548, 677
Csp6I	GTAC	1 cut(s)	847
CspAI	ACCGGT	1 cut(s)	527
CviAII	CATG	5 cut(s)	256, 295, 493, 929, 1158
CviQI	GTAC	1 cut(s)	847
DdeI	CTNAG	1 cut(s)	120
DpnI	GATC	3 cut(s)	324, 972, 991
DpnII	GATC	3 cut(s)	322, 970, 989
DrdI	GACNNNNNNGTC	1 cut(s)	245
DseDI	GACNNNNNNGTC	1 cut(s)	245
EaeI	YGGCCR	1 cut(s)	297
Eam1104I	CTCTTC	1 cut(s)	461
EarI	CTCTTC	1 cut(s)	461
Eco105I	TACGTA	1 cut(s)	439
Eco130I	CCWWGG	2 cut(s)	57, 486
Eco31I	GGTCTC	1 cut(s)	128
Eco47I	GGWCC	2 cut(s)	311, 664
Eco57I	CTGAAG	3 cut(s)	339, 482, 884
Eco91I	GGTNACC	2 cut(s)	124, 530
EcoO65I	GGTNACC	2 cut(s)	124, 530
EcoRI	GAATTC	2 cut(s)	94, 371
EcoRII	CCWGG	3 cut(s)	171, 630, 866
EcoT14I	CCWWGG	2 cut(s)	57, 486
ErhI	CCWWGG	2 cut(s)	57, 486
Esp3I	CGTCTC	1 cut(s)	231
FaeI	CATG	5 cut(s)	259, 298, 496, 932, 1161
FalI	AAGNNNNNCTT	2 cut(s)	882, 914
FaqI	GGGAC	2 cut(s)	458, 763
FatI	CATG	5 cut(s)	255, 294, 492, 928, 1157
FauNDI	CATATG	1 cut(s)	179
FblI	GTMKAC	1 cut(s)	1084
FokI	GGATG	5 cut(s)	488, 868, 888, 1013, 1082
FspBI	CTAG	1 cut(s)	89
GlaI	GCGC	2 cut(s)	80, 109
GsaI	CCCAGC	2 cut(s)	142, 816
GsuI	CTGGAG	1 cut(s)	824
HaeIII	GGCC	3 cut(s)	254, 299, 817
HapII	CCGG	3 cut(s)	129, 314, 528
HgaI	GACGC	5 cut(s)	13, 251, 350, 548, 677
HhaI	GCGC	2 cut(s)	81, 110
Hin1I	GRCGYC	2 cut(s)	41, 243
Hin1II	CATG	5 cut(s)	259, 298, 496, 932, 1161
Hin6I	GCGC	2 cut(s)	79, 108
HinP1I	GCGC	2 cut(s)	79, 108
HpaII	CCGG	3 cut(s)	129, 314, 528
HphI	GGTGA	2 cut(s)	118, 1142
Hpy166II	GTNNAC	2 cut(s)	365, 1085
Hpy188I	TCNGA	5 cut(s)	39, 389, 775, 903, 1021
Hpy188III	TCNNGA	5 cut(s)	64, 190, 356, 841, 1061
Hpy8I	GTNNAC	2 cut(s)	365, 1085
Hpy99I	CGWCG	4 cut(s)	43, 46, 245, 251
HpyAV	CCTTC	3 cut(s)	298, 376, 566
HpyCH4III	ACNGT	4 cut(s)	151, 449, 589, 754
HpyCH4IV	ACGT	3 cut(s)	41, 438, 743
HpyCH4V	TGCA	2 cut(s)	521, 1157
HpyF10VI	GCNNNNNNNGC	2 cut(s)	251, 718
HpyF3I	CTNAG	1 cut(s)	120
HpySE526I	ACGT	3 cut(s)	41, 438, 743
Hsp92I	GRCGYC	2 cut(s)	41, 243
Hsp92II	CATG	5 cut(s)	259, 298, 496, 932, 1161
HspAI	GCGC	2 cut(s)	79, 108
Kzo9I	GATC	3 cut(s)	322, 970, 989
LmnI	GCTCC	3 cut(s)	90, 358, 932
LweI	GCATC	3 cut(s)	262, 342, 853
MaeI	CTAG	1 cut(s)	89
MaeII	ACGT	3 cut(s)	41, 438, 743
MaeIII	GTNAC	7 cut(s)	61, 124, 145, 434, 530, 1093, 1130
MalI	GATC	3 cut(s)	324, 972, 991
MbiI	CCGCTC	1 cut(s)	213
MboI	GATC	3 cut(s)	322, 970, 989
MboII	GAAGA	6 cut(s)	237, 332, 478, 581, 1106, 1120
MfeI	CAATTG	1 cut(s)	675
MflI	RGATCY	1 cut(s)	322
MluCI	AATT	5 cut(s)	94, 371, 579, 675, 915
MlyI	GAGTC	6 cut(s)	153, 195, 273, 738, 889, 1028
MmeI	TCCRAC	2 cut(s)	62, 691
MnlI	CCTC	9 cut(s)	106, 147, 244, 383, 702, 828, 844, 866, 1060
MroXI	GAANNNNTTC	1 cut(s)	919
MseI	TTAA	4 cut(s)	420, 582, 797, 1119
MspI	CCGG	3 cut(s)	129, 314, 528
MspR9I	CCNGG	3 cut(s)	173, 632, 868
MunI	CAATTG	1 cut(s)	675
MvaI	CCWGG	3 cut(s)	173, 632, 868
MwoI	GCNNNNNNNGC	2 cut(s)	251, 718
NdeI	CATATG	1 cut(s)	179
NdeII	GATC	3 cut(s)	322, 970, 989
NlaIII	CATG	5 cut(s)	259, 298, 496, 932, 1161
NlaIV	GGNNCC	3 cut(s)	86, 408, 934
NmeAIII	GCCGAG	3 cut(s)	55, 136, 209
NmuCI	GTSAC	5 cut(s)	61, 124, 145, 1093, 1130
NspI	RCATGY	1 cut(s)	496
PcsI	WCGNNNNNNNCGW	4 cut(s)	237, 246, 297, 358
PdmI	GAANNNNTTC	1 cut(s)	919
PfeI	GAWTC	4 cut(s)	167, 228, 643, 1111
PflFI	GACNNNGTC	1 cut(s)	245
PfoI	TCCNGGA	1 cut(s)	630
PinAI	ACCGGT	1 cut(s)	527
PleI	GAGTC	6 cut(s)	152, 194, 273, 737, 888, 1028
PpsI	GAGTC	6 cut(s)	152, 194, 273, 737, 888, 1028
Ppu21I	YACGTR	1 cut(s)	439
Psp6I	CCWGG	3 cut(s)	171, 630, 866
PspEI	GGTNACC	2 cut(s)	124, 530
PspFI	CCCAGC	2 cut(s)	138, 812
PspGI	CCWGG	3 cut(s)	171, 630, 866
PspN4I	GGNNCC	3 cut(s)	86, 408, 934
PspPI	GGNCC	3 cut(s)	311, 664, 815
PsuI	RGATCY	1 cut(s)	322
PsyI	GACNNNGTC	1 cut(s)	245
RsaI	GTAC	1 cut(s)	848
RsaNI	GTAC	1 cut(s)	847
SaqAI	TTAA	4 cut(s)	420, 582, 797, 1119
Sau3AI	GATC	3 cut(s)	322, 970, 989
Sau96I	GGNCC	3 cut(s)	311, 664, 815
SchI	GAGTC	6 cut(s)	153, 195, 273, 738, 889, 1028
ScrFI	CCNGG	3 cut(s)	173, 632, 868
SfaNI	GCATC	3 cut(s)	262, 342, 853
SfcI	CTRYAG	1 cut(s)	620
SgrAI	CRCCGGYG	1 cut(s)	128
SinI	GGWCC	2 cut(s)	311, 664
SnaBI	TACGTA	1 cut(s)	439
Sse9I	AATT	5 cut(s)	94, 371, 579, 675, 915
SsiI	CCGC	2 cut(s)	213, 1137
SspMI	CTAG	1 cut(s)	89
StyD4I	CCNGG	3 cut(s)	171, 630, 866
StyI	CCWWGG	2 cut(s)	57, 486
TaaI	ACNGT	4 cut(s)	151, 449, 589, 754
TaiI	ACGT	3 cut(s)	44, 441, 746
TaqI	TCGA	7 cut(s)	231, 249, 291, 346, 606, 861, 992
TaqII	GACCGA	2 cut(s)	88, 249
TasI	AATT	5 cut(s)	94, 371, 579, 675, 915
TatI	WGTACW	1 cut(s)	846
TfiI	GAWTC	4 cut(s)	167, 228, 643, 1111
Tru1I	TTAA	4 cut(s)	420, 582, 797, 1119
Tru9I	TTAA	4 cut(s)	420, 582, 797, 1119
TscAI	CASTG	1 cut(s)	156
TseFI	GTSAC	5 cut(s)	61, 124, 145, 1093, 1130
Tsp45I	GTSAC	5 cut(s)	61, 124, 145, 1093, 1130
TspDTI	ATGAA	2 cut(s)	494, 1158
TspGWI	ACGGA	3 cut(s)	210, 478, 868
TspRI	CASTG	1 cut(s)	156
Tth111I	GACNNNGTC	1 cut(s)	245
VpaK11BI	GGWCC	2 cut(s)	311, 664
XapI	RAATTY	2 cut(s)	94, 371
XceI	RCATGY	1 cut(s)	496
XcmI	CCANNNNNNNNNTGG	1 cut(s)	292
XmiI	GTMKAC	1 cut(s)	1084
XmnI	GAANNNNTTC	1 cut(s)	919
XspI	CTAG	1 cut(s)	89
ZraI	GACGTC	1 cut(s)	42

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.