Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002972

Physical Location & Seq

Genomic Coordinates Reverse (-)

18710871 .. 18713649

Gene Structure 2779 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G50420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2385 bp

ATGACGAGAGGTTCGATGAAACGCAGCGTATTGTTTGTAGAGACAGACGCCGCTGCCGAGTATCCGTACGCAAATAACAATCTCATATCGATGTACGTGAGGTGTAGTTCGCTGGAACAAGCACGGAAAGTGTTCGACAAAATGCCTCAGAGAAACATTGTAACTCTATTCGGACTTAGTGCTGTATTTGAGTATGTTTCCATGGGATCATCACTGCATTCGCAGATTATAAAGCTTGGATCTTTTCAGATGATCTTTTTTATGCCACTGAACGAAATAGCTTCTTCCGTTGTAGAACTTACACGGAAATGCGTCTCGATCACGGTACTAAAACGGGCGCGTCAGATCCACGCTCTCGTCCTCACCGCCGGCGCTGGCGCCGCTACCGAGTCTCCGTACGCAAATAACAATCTCATCTCAATGTATGTGAGGTGTGGTTCACTGGAACAAGCACGGAAAGTGTTCGACAAAATGCCTCACAGAAACGTAGTTTCTTATAATGCGCTTTATTCGGCGTATTCCCGGAACCCAGATTTTGCAAGTTATGCGTTTCCTCTAACAACCCATATGGCGTTTGAGTACGTGAAGCCCAATAGTTCAACTTTCACTAGCTTAGTGCAAGTATGTGCTGTGCTTGAGGATGTTTTAATGGGGTCATCATTAAACTCGCAGATTATAAAGCTTGGTTATTCAGATAATGTAGTTGTCCAGACATCGGTTTTGGGGATGTACTCTAGTTGCGGGGACTTAGAATCTGCGAGGAGAATATTTGACTGTGTAAATAATAGAGATGCGGTTGCTTGGAACACAATGATAGTTGGGAGTTTGAAAAATGATAAGATAGAAGATGGGCTTATGTTCTTTCGAAACATGTTGATGTCTGGTGTTGATCCAACGCAGTTCACGTATTCGATTGTGTTGAATGGTTGTAGTAAATTGGGAAGCTATTCACTGGGGAAACTAATCCATGCCCGGATAATAGTCTCTGATAGTTTAGCTGATTTACCTCTAGATAATGCTCTTCTTGACATGTATTGCAGTTGTGGAGACATGAGGGAAGCATTTTATGTGTTTGGGAGGATTCATAACCCAAATTTGGTTTCATGGAACTCGATTATTTCAGGGTGCTCAGAAAACGGCTTTGGAGAGCAAGCGATGCTTATGTATAGAAGGTTGCTGAGGATGTCCACACCTCGGCCGGATGAATATACTTTCTCTGCTGCTATATCTGCGACAGCGGAACCAGAAAGATTTGTTCATGGGAAGCTTCTTCACGGACAAGTAACGAAATTAGGATATGAAAGGAGTGTTTTTGTTGGAACAACACTATTGTCGATGTACTTCAAGAACAGGGAAGCTGAATCTGCACAGAAGGTGTTTGATGTGATGAAGGAAAGGGATGTTGTTCTCTGGACTGAGATGATCGTAGGGCATTCTAGATTAGGAAACAGCGAATTAGCGGTCCAATTCTTCATTGAAATGTACAGAGAAAAGAATAGAAGTGATGGTTTTTCCCTGAGTAGTGTCATAGGAGCATGTTCAGATATGGCAATGCTAAGACAAGGTGAAGTTTTCCATTGTCTTGCCATAAGGACGGGATTCGATTGTGTTATGTCAGTATGTGGAGCGCTAGTAGACATGTATGGGAAAAACGGTAAATACGAAACTGCAGAAACAATATTCTCTCTTGCTTCAAATCCAGATTTGAAATGTTGGAATTCGATGCTAGGTGCTTATAGTCAGCATGGAATGGTAGAAAAAGCTCTGAGCTTCTTCGAGCAAATACTAGAAAACGGATTCATGCCAGATGCTGTTACATACTTGTCTTTATTAGCAGCCTGTAGCCACAGGGGATCAACGTTGCAAGGTAAGTTCCTATGGAACCAAATGAAGGAACAGGGCATCAAAGCAGGGTTTAAGCACTACTCTTGCATGGTGAATTTAGTATCAAAAGCTGGGTTAGTAGACGAGGCACTGGAACTGATAGAACAATCTCCTCCCGGGAACAACCAAGCAGAGCTCTGGAGAACTCTGCTAAGCGCATGTGTTAACACAAGAAACTTGCAGATAGGACTATATGCAGCTGAGCAAATACTGAAACTTGATCCAGAAGACACTGCAACACACATTCTACTATCAAATTTATATGCAGTAAATGGGAGATGGGAGGATGTTGCAGAGATGAGAAGGAAGATTAGAGGATTAGCTTCATCTAAAGATCCAGGATTGAGCTGGATTGAAGTGAACAACAACAATACACAAGTTTTCTCCTCAGGAGACCAGTCGAACCCAGAAGTTGTAAGTCAAGCTCAAGATGAATTAAATAGATTAAAGAGAAATATGTTGTGCAAATCATCATTCAATAAACTTGTCTGTTCAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 PPR PPR_2

Protein Analysis

794

Amino Acids

88.52

Weight (kDa)

6.91

Isoelectric Point (pI)

41.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	264 - 312	9.6e-13	PPR repeat family
PPR_2	PF13041	364 - 411	6.6e-06	PPR repeat family
PPR_2	PF13041	567 - 615	3.1e-11	PPR repeat family
PPR	PF01535	571 - 600	1.5e-07	PPR repeat
E_motif	PF20431	687 - 747	4.6e-14	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50420 AT3G50420
fragaria_vesca	FvH4_1g14840
malus_domestica	MD06G1092000.v1.1 MD15G1276000.v1.1
prunus_persica	Prupe.7G142000_v2.0.a1
pyrus_communis	pycom06g08800 pycom15g23890
rosa_chinensis	RchiOBHm_Chr1g0329891 RchiOBHm_Chr2g0103801
rosa_laevigata	RLG00000017261 RLG00000017264 RLG00000029855 RLG00000029861
rosa_multiflora	Rmu_sc0000112.1_g000010 Rmu_sc0000112.1_g000024 Rmu_sc0000112.1_g000025 Rmu_sc0002081.1_g000002 Rmu_sc0002081.1_g000010 Rmu_sc0006774.1_g000014
rosa_roxburghii	Rroxscaffold_2G00139300 Rroxscaffold_2G00139350 Rroxscaffold_4G00320530
rosa_rugosa	Rorug01G0084100 Rorug02G0117300
rosa_samantha	Rh1AG102000 Rh1BG081200 Rh1CG097500 Rh1DG105100 Rh2AG166400 Rh2BG173600 Rh2CG172300 Rh2DG171800
rosa_wichuraiana	Rw0G002030 Rw0G006910 Rw1G008070 Rw1G008120 Rw2G013030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	230, 498, 677
AccB1I	GGYRCC	1 cut(s)	377
AccI	GTMKAC	2 cut(s)	1635, 1965
AccII	CGCG	1 cut(s)	340
AciI	CCGC	7 cut(s)	51, 366, 381, 741, 794, 1238, 1460
AclI	AACGTT	1 cut(s)	1859
AclWI	GGATC	7 cut(s)	214, 247, 340, 884, 1861, 2099, 2213
AcoI	YGGCCR	1 cut(s)	1196
AcsI	RAATTY	4 cut(s)	1093, 1717, 1939, 2140
AcyI	GRCGYC	2 cut(s)	48, 378
AfaI	GTAC	8 cut(s)	68, 95, 327, 398, 581, 731, 1340, 1484
AfeI	AGCGCT	1 cut(s)	1629
AfiI	CCNNNNNNNGG	4 cut(s)	715, 1096, 1194, 1891
AflIII	ACRYGT	3 cut(s)	870, 1029, 1638
AjnI	CCWGG	1 cut(s)	2221
AjuI	GAANNNNNNNTTGG	4 cut(s)	1084, 1116, 1125, 1157
Alw21I	GWGCWC	2 cut(s)	1130, 2022
Alw26I	GTCTC	6 cut(s)	35, 319, 396, 988, 1041, 2271
AlwI	GGATC	7 cut(s)	214, 247, 340, 884, 1861, 2099, 2213
AlwNI	CAGNNNCTG	1 cut(s)	1811
Ama87I	CYCGRG	1 cut(s)	2000
Aor51HI	AGCGCT	1 cut(s)	1629
AoxI	GGCC	1 cut(s)	1196
ApeKI	GCWGC	5 cut(s)	24, 53, 1220, 1835, 2081
ApoI	RAATTY	4 cut(s)	1093, 1717, 1939, 2140
ArsI	GACNNNNNNTTYG	5 cut(s)	27, 703, 735, 1446, 1478
Asp700I	GAANNNNTTC	3 cut(s)	131, 461, 946
AspLEI	GCGC	6 cut(s)	340, 374, 380, 505, 1630, 2042
AspS9I	GGNCC	1 cut(s)	1462
AsuC2I	CCSGG	4 cut(s)	523, 973, 2001, 2002
AsuHPI	GGTGA	3 cut(s)	355, 1577, 1948
AsuII	TTCGAA	1 cut(s)	865
AvaI	CYCGRG	1 cut(s)	2000
AvaII	GGWCC	1 cut(s)	1462
AxyI	CCTNAGG	1 cut(s)	2272
BanI	GGYRCC	1 cut(s)	377
BanII	GRGCYC	1 cut(s)	2022
BbsI	GAAGAC	1 cut(s)	2118
Bbv12I	GWGCWC	2 cut(s)	1130, 2022
BbvCI	CCTCAGC	1 cut(s)	1178
BbvI	GCAGC	5 cut(s)	36, 40, 1207, 1847, 2093
BccI	CCATC	3 cut(s)	842, 1499, 2157
BceAI	ACGGC	1 cut(s)	1153
BciT130I	CCWGG	1 cut(s)	2223
BciVI	GTATCC	1 cut(s)	72
BcnI	CCSGG	4 cut(s)	523, 973, 2001, 2002
BcoDI	GTCTC	6 cut(s)	35, 319, 396, 988, 1041, 2271
BfaI	CTAG	7 cut(s)	609, 735, 1010, 1437, 1631, 1727, 1787
BfmI	CTRYAG	2 cut(s)	1668, 1840
BfoI	RGCGCY	3 cut(s)	375, 381, 1631
BfuI	GTATCC	1 cut(s)	72
BisI	GCNGC	7 cut(s)	25, 51, 54, 381, 1221, 1836, 2082
BlpI	GCTNAGC	2 cut(s)	2036, 2085
BlsI	GCNGC	7 cut(s)	26, 52, 55, 382, 1222, 1837, 2083
Bme1390I	CCNGG	5 cut(s)	523, 973, 2001, 2002, 2223
Bme18I	GGWCC	1 cut(s)	1462
BmeT110I	CYCGRG	1 cut(s)	2000
BmgT120I	GGNCC	1 cut(s)	1462
BmiI	GGNNCC	4 cut(s)	379, 527, 1242, 1883
BmrFI	CCNGG	5 cut(s)	523, 973, 2001, 2002, 2223
BmrI	ACTGGG	1 cut(s)	962
BmsI	GCATC	5 cut(s)	781, 1146, 1713, 1798, 1911
BmuI	ACTGGG	1 cut(s)	962
BpiI	GAAGAC	1 cut(s)	2118
BpmI	CTGGAG	1 cut(s)	2044
Bpu10I	CCTNAGC	1 cut(s)	1178
Bpu1102I	GCTNAGC	2 cut(s)	2036, 2085
Bpu14I	TTCGAA	1 cut(s)	865
BpuEI	CTTGAG	2 cut(s)	656, 2295
BpuMI	CCSGG	4 cut(s)	523, 973, 2001, 2002
Bsa29I	ATCGAT	1 cut(s)	89
BsaAI	YACGTR	3 cut(s)	97, 583, 906
BsaHI	GRCGYC	2 cut(s)	48, 378
BsaI	GGTCTC	1 cut(s)	2271
BsaJI	CCNNGG	3 cut(s)	201, 1193, 2000
BsaXI	ACNNNNNCTCC	4 cut(s)	376, 406, 1617, 1647
Bsc4I	CCNNNNNNNGG	4 cut(s)	715, 1096, 1194, 1891
Bse118I	RCCGGY	1 cut(s)	368
Bse1I	ACTGG	4 cut(s)	447, 957, 1980, 2281
Bse21I	CCTNAGG	1 cut(s)	2272
Bse3DI	GCAATG	1 cut(s)	1557
BseBI	CCWGG	1 cut(s)	2223
BseCI	ATCGAT	1 cut(s)	89
BseDI	CCNNGG	3 cut(s)	201, 1193, 2000
BseGI	GGATG	6 cut(s)	646, 732, 1188, 1207, 1405, 2176
BseLI	CCNNNNNNNGG	4 cut(s)	715, 1096, 1194, 1891
BseMI	GCAATG	1 cut(s)	1557
BseMII	CTCAG	8 cut(s)	161, 1143, 1169, 1407, 1508, 1757, 2076, 2286
BseNI	ACTGG	4 cut(s)	447, 957, 1980, 2281
BseRI	GAGGAG	3 cut(s)	775, 1986, 2260
BseX3I	CGGCCG	1 cut(s)	1196
BseXI	GCAGC	5 cut(s)	36, 40, 1207, 1847, 2093
BseYI	CCCAGC	1 cut(s)	1955
BsgI	GTGCAG	1 cut(s)	1350
Bsh1236I	CGCG	1 cut(s)	340
Bsh1285I	CGRYCG	1 cut(s)	1199
BshFI	GGCC	1 cut(s)	1198
BshNI	GGYRCC	1 cut(s)	377
BshVI	ATCGAT	1 cut(s)	89
BsiEI	CGRYCG	1 cut(s)	1199
BsiHKAI	GWGCWC	2 cut(s)	1130, 2022
BsiHKCI	CYCGRG	1 cut(s)	2000
BsiSI	CCGG	5 cut(s)	369, 523, 973, 1199, 2001
BsiWI	CGTACG	2 cut(s)	66, 396
BslFI	GGGAC	1 cut(s)	758
BslI	CCNNNNNNNGG	4 cut(s)	715, 1096, 1194, 1891
BsmAI	GTCTC	6 cut(s)	35, 319, 396, 988, 1041, 2271
BsmBI	CGTCTC	1 cut(s)	319
BsmFI	GGGAC	1 cut(s)	758
BsmI	GAATGC	2 cut(s)	217, 1432
BsnI	GGCC	1 cut(s)	1198
Bso31I	GGTCTC	1 cut(s)	2271
BsoBI	CYCGRG	1 cut(s)	2000
Bsp119I	TTCGAA	1 cut(s)	865
Bsp1286I	GDGCHC	2 cut(s)	1130, 2022
Bsp1407I	TGTACA	1 cut(s)	1482
Bsp1720I	GCTNAGC	2 cut(s)	2036, 2085
Bsp19I	CCATGG	1 cut(s)	201
BspACI	CCGC	7 cut(s)	51, 366, 381, 741, 794, 1238, 1460
BspANI	GGCC	1 cut(s)	1198
BspCNI	CTCAG	8 cut(s)	160, 1142, 1170, 1408, 1509, 1758, 2077, 2285
BspDI	ATCGAT	1 cut(s)	89
BspFNI	CGCG	1 cut(s)	340
BspLI	GGNNCC	4 cut(s)	379, 527, 1242, 1883
BspMAI	CTGCAG	1 cut(s)	1672
BspPI	GGATC	7 cut(s)	214, 247, 340, 884, 1861, 2099, 2213
BspQI	GCTCTTC	1 cut(s)	1026
BspT104I	TTCGAA	1 cut(s)	865
BspT107I	GGYRCC	1 cut(s)	377
BspTNI	GGTCTC	1 cut(s)	2271
BsrDI	GCAATG	1 cut(s)	1557
BsrFI	RCCGGY	1 cut(s)	368
BsrGI	TGTACA	1 cut(s)	1482
BsrI	ACTGG	4 cut(s)	447, 957, 1980, 2281
BssAI	RCCGGY	1 cut(s)	368
BssECI	CCNNGG	3 cut(s)	201, 1193, 2000
BssNI	GRCGYC	2 cut(s)	48, 378
BssT1I	CCWWGG	1 cut(s)	201
Bst2UI	CCWGG	1 cut(s)	2223
Bst4CI	ACNGT	3 cut(s)	325, 776, 1655
Bst6I	CTCTTC	1 cut(s)	1026
BstACI	GRCGYC	2 cut(s)	48, 378
BstAPI	GCANNNNNTGC	2 cut(s)	545, 1156
BstAUI	TGTACA	1 cut(s)	1482
BstBAI	YACGTR	3 cut(s)	97, 583, 906
BstBI	TTCGAA	1 cut(s)	865
BstC8I	GCNNGC	3 cut(s)	370, 376, 1152
BstDSI	CCRYGG	1 cut(s)	201
BstF5I	GGATG	6 cut(s)	646, 732, 1188, 1207, 1405, 2176
BstFNI	CGCG	1 cut(s)	340
BstH2I	RGCGCY	3 cut(s)	375, 381, 1631
BstHHI	GCGC	6 cut(s)	340, 374, 380, 505, 1630, 2042
BstMAI	GTCTC	6 cut(s)	35, 319, 396, 988, 1041, 2271
BstMCI	CGRYCG	1 cut(s)	1199
BstMWI	GCNNNNNNNGC	5 cut(s)	380, 545, 1156, 1229, 1364
BstNI	CCWGG	1 cut(s)	2223
BstNSI	RCATGY	5 cut(s)	874, 1033, 1539, 1642, 2046
BstSCI	CCNGG	5 cut(s)	521, 971, 1999, 2000, 2221
BstSFI	CTRYAG	2 cut(s)	1668, 1840
BstUI	CGCG	1 cut(s)	340
BstV1I	GCAGC	5 cut(s)	36, 40, 1207, 1847, 2093
BstV2I	GAAGAC	1 cut(s)	2118
BstX2I	RGATCY	3 cut(s)	239, 345, 2218
BstYI	RGATCY	3 cut(s)	239, 345, 2218
BstZI	CGGCCG	1 cut(s)	1196
Bsu15I	ATCGAT	1 cut(s)	89
Bsu36I	CCTNAGG	1 cut(s)	2272
BsuI	GTATCC	1 cut(s)	72
BsuRI	GGCC	1 cut(s)	1198
BsuTUI	ATCGAT	1 cut(s)	89
BtgI	CCRYGG	1 cut(s)	201
BtgZI	GCGATG	1 cut(s)	1169
BtsCI	GGATG	6 cut(s)	646, 732, 1188, 1207, 1405, 2176
BtsI	GCAGTG	2 cut(s)	212, 2115
BtsIMutI	CAGTG	6 cut(s)	212, 266, 440, 950, 1973, 2115
Cac8I	GCNNGC	3 cut(s)	370, 376, 1152
CaiI	CAGNNNCTG	1 cut(s)	1811
CfoI	GCGC	6 cut(s)	340, 374, 380, 505, 1630, 2042
Cfr10I	RCCGGY	1 cut(s)	368
Cfr13I	GGNCC	1 cut(s)	1462
Cfr9I	CCCGGG	1 cut(s)	2000
ClaI	ATCGAT	1 cut(s)	89
CseI	GACGC	3 cut(s)	56, 301, 329
Csp6I	GTAC	8 cut(s)	67, 94, 326, 397, 580, 730, 1339, 1483
CviQI	GTAC	8 cut(s)	67, 94, 326, 397, 580, 730, 1339, 1483
DinI	GGCGCC	1 cut(s)	379
EaeI	YGGCCR	1 cut(s)	1196
EagI	CGGCCG	1 cut(s)	1196
Eam1104I	CTCTTC	1 cut(s)	1026
EarI	CTCTTC	1 cut(s)	1026
Ecl136II	GAGCTC	1 cut(s)	2020
EclXI	CGGCCG	1 cut(s)	1196
Eco130I	CCWWGG	1 cut(s)	201
Eco24I	GRGCYC	1 cut(s)	2022
Eco31I	GGTCTC	1 cut(s)	2271
Eco47I	GGWCC	1 cut(s)	1462
Eco47III	AGCGCT	1 cut(s)	1629
Eco52I	CGGCCG	1 cut(s)	1196
Eco53kI	GAGCTC	1 cut(s)	2020
Eco81I	CCTNAGG	1 cut(s)	2272
Eco88I	CYCGRG	1 cut(s)	2000
EcoICRI	GAGCTC	1 cut(s)	2020
EcoRI	GAATTC	1 cut(s)	1717
EcoRII	CCWGG	1 cut(s)	2221
EcoT14I	CCWWGG	1 cut(s)	201
EcoT38I	GRGCYC	1 cut(s)	2022
EgeI	GGCGCC	1 cut(s)	379
EheI	GGCGCC	1 cut(s)	379
ErhI	CCWWGG	1 cut(s)	201
Esp3I	CGTCTC	1 cut(s)	319
FalI	AAGNNNNNCTT	4 cut(s)	837, 869, 1143, 1175
FaqI	GGGAC	1 cut(s)	758
FauI	CCCGC	1 cut(s)	734
FauNDI	CATATG	1 cut(s)	567
FblI	GTMKAC	2 cut(s)	1635, 1965
Fnu4HI	GCNGC	7 cut(s)	25, 51, 54, 381, 1221, 1836, 2082
FokI	GGATG	6 cut(s)	653, 739, 1195, 1214, 1412, 2183
FriOI	GRGCYC	1 cut(s)	2022
Fsp4HI	GCNGC	7 cut(s)	25, 51, 54, 381, 1221, 1836, 2082
FspBI	CTAG	7 cut(s)	609, 735, 1010, 1437, 1631, 1727, 1787
GlaI	GCGC	6 cut(s)	339, 373, 379, 504, 1629, 2041
GluI	GCNGC	7 cut(s)	25, 51, 54, 381, 1221, 1836, 2082
GsaI	CCCAGC	1 cut(s)	1959
GsuI	CTGGAG	1 cut(s)	2044
HaeII	RGCGCY	3 cut(s)	375, 381, 1631
HaeIII	GGCC	1 cut(s)	1198
HapII	CCGG	5 cut(s)	369, 523, 973, 1199, 2001
HgaI	GACGC	3 cut(s)	56, 301, 329
HhaI	GCGC	6 cut(s)	340, 374, 380, 505, 1630, 2042
Hin1I	GRCGYC	2 cut(s)	48, 378
Hin6I	GCGC	6 cut(s)	338, 372, 378, 503, 1628, 2040
HinP1I	GCGC	6 cut(s)	338, 372, 378, 503, 1628, 2040
HincII	GTYRAC	1 cut(s)	2050
HindII	GTYRAC	1 cut(s)	2050
HindIII	AAGCTT	3 cut(s)	233, 680, 1265
HinfI	GANTC	6 cut(s)	389, 752, 1081, 1361, 1599, 1797
HpaI	GTTAAC	1 cut(s)	2050
HpaII	CCGG	5 cut(s)	369, 523, 973, 1199, 2001
HphI	GGTGA	3 cut(s)	355, 1577, 1948
Hpy166II	GTNNAC	7 cut(s)	440, 903, 1188, 1636, 1966, 2050, 2245
Hpy188I	TCNGA	9 cut(s)	150, 173, 249, 345, 694, 988, 1132, 1543, 1767
Hpy8I	GTNNAC	7 cut(s)	440, 903, 1188, 1636, 1966, 2050, 2245
HpyAV	CCTTC	5 cut(s)	1164, 1366, 1384, 1885, 2181
HpyCH4III	ACNGT	3 cut(s)	325, 776, 1655
HpyCH4IV	ACGT	5 cut(s)	96, 486, 582, 905, 1859
HpyF10VI	GCNNNNNNNGC	5 cut(s)	380, 545, 1156, 1229, 1364
HpySE526I	ACGT	5 cut(s)	96, 486, 582, 905, 1859
Hsp92I	GRCGYC	2 cut(s)	48, 378
HspAI	GCGC	6 cut(s)	338, 372, 378, 503, 1628, 2040
KasI	GGCGCC	1 cut(s)	377
KroI	GCCGGC	1 cut(s)	368
KroNI	GCCGGC	1 cut(s)	370
KspAI	GTTAAC	1 cut(s)	2050
LguI	GCTCTTC	1 cut(s)	1026
LmnI	GCTCC	2 cut(s)	1532, 1625
Lsp1109I	GCAGC	5 cut(s)	36, 40, 1207, 1847, 2093
LweI	GCATC	5 cut(s)	781, 1146, 1713, 1798, 1911
MaeI	CTAG	7 cut(s)	609, 735, 1010, 1437, 1631, 1727, 1787
MaeII	ACGT	5 cut(s)	96, 486, 582, 905, 1859
MaeIII	GTNAC	3 cut(s)	160, 1282, 1813
MboII	GAAGA	8 cut(s)	276, 857, 1013, 1262, 1462, 1765, 2123, 2203
MflI	RGATCY	3 cut(s)	239, 345, 2218
MhlI	GDGCHC	2 cut(s)	1130, 2022
Mly113I	GGCGCC	1 cut(s)	378
MlyI	GAGTC	1 cut(s)	398
MmeI	TCCRAC	3 cut(s)	917, 1297, 1694
MreI	CGCCGGCG	1 cut(s)	368
MroNI	GCCGGC	1 cut(s)	368
MroXI	GAANNNNTTC	3 cut(s)	131, 461, 946
MseI	TTAA	7 cut(s)	647, 662, 1917, 2049, 2321, 2330, 2383
MslI	CAYNNNNRTG	5 cut(s)	89, 307, 419, 875, 1478
MspA1I	CMGCKG	3 cut(s)	53, 1238, 2084
MspI	CCGG	5 cut(s)	369, 523, 973, 1199, 2001
MspR9I	CCNGG	5 cut(s)	523, 973, 2001, 2002, 2223
Mva1269I	GAATGC	2 cut(s)	217, 1432
MvaI	CCWGG	1 cut(s)	2223
MvnI	CGCG	1 cut(s)	340
MwoI	GCNNNNNNNGC	5 cut(s)	380, 545, 1156, 1229, 1364
NaeI	GCCGGC	1 cut(s)	370
NarI	GGCGCC	1 cut(s)	378
NciI	CCSGG	4 cut(s)	523, 973, 2001, 2002
NcoI	CCATGG	1 cut(s)	201
NdeI	CATATG	1 cut(s)	567
NgoMIV	GCCGGC	1 cut(s)	368
NlaIV	GGNNCC	4 cut(s)	379, 527, 1242, 1883
NmeAIII	GCCGAG	2 cut(s)	82, 1174
NspI	RCATGY	5 cut(s)	874, 1033, 1539, 1642, 2046
NspV	TTCGAA	1 cut(s)	865
PciI	ACATGT	3 cut(s)	870, 1029, 1638
PciSI	GCTCTTC	1 cut(s)	1026
PcsI	WCGNNNNNNNCGW	4 cut(s)	11, 54, 902, 1659
PctI	GAATGC	2 cut(s)	217, 1432
PdiI	GCCGGC	1 cut(s)	370
PdmI	GAANNNNTTC	3 cut(s)	131, 461, 946
PfeI	GAWTC	5 cut(s)	752, 1081, 1361, 1599, 1797
Pfl23II	CGTACG	2 cut(s)	66, 396
PfoI	TCCNGGA	2 cut(s)	521, 2221
PkrI	GCNGC	7 cut(s)	26, 52, 55, 382, 1222, 1837, 2083
PleI	GAGTC	1 cut(s)	397
PluTI	GGCGCC	1 cut(s)	381
PpsI	GAGTC	1 cut(s)	397
Ppu21I	YACGTR	3 cut(s)	97, 583, 906
PscI	ACATGT	3 cut(s)	870, 1029, 1638
PsiI	TTATAA	3 cut(s)	230, 498, 677
Psp124BI	GAGCTC	1 cut(s)	2022
Psp1406I	AACGTT	1 cut(s)	1859
Psp6I	CCWGG	1 cut(s)	2221
PspFI	CCCAGC	1 cut(s)	1955
PspGI	CCWGG	1 cut(s)	2221
PspLI	CGTACG	2 cut(s)	66, 396
PspN4I	GGNNCC	4 cut(s)	379, 527, 1242, 1883
PspPI	GGNCC	1 cut(s)	1462
PstI	CTGCAG	1 cut(s)	1672
PstNI	CAGNNNCTG	1 cut(s)	1811
PsuI	RGATCY	3 cut(s)	239, 345, 2218
PvuII	CAGCTG	1 cut(s)	2084
RsaI	GTAC	8 cut(s)	68, 95, 327, 398, 581, 731, 1340, 1484
RsaNI	GTAC	8 cut(s)	67, 94, 326, 397, 580, 730, 1339, 1483
RseI	CAYNNNNRTG	5 cut(s)	89, 307, 419, 875, 1478
SacI	GAGCTC	1 cut(s)	2022
SapI	GCTCTTC	1 cut(s)	1026
SaqAI	TTAA	7 cut(s)	647, 662, 1917, 2049, 2321, 2330, 2383
SatI	GCNGC	7 cut(s)	25, 51, 54, 381, 1221, 1836, 2082
Sau96I	GGNCC	1 cut(s)	1462
SchI	GAGTC	1 cut(s)	398
ScrFI	CCNGG	5 cut(s)	523, 973, 2001, 2002, 2223
SduI	GDGCHC	2 cut(s)	1130, 2022
SfaNI	GCATC	5 cut(s)	781, 1146, 1713, 1798, 1911
SfcI	CTRYAG	2 cut(s)	1668, 1840
SfoI	GGCGCC	1 cut(s)	379
SfuI	TTCGAA	1 cut(s)	865
SgrAI	CRCCGGYG	1 cut(s)	368
SinI	GGWCC	1 cut(s)	1462
SmaI	CCCGGG	1 cut(s)	2002
SmiMI	CAYNNNNRTG	5 cut(s)	89, 307, 419, 875, 1478
SmlI	CTYRAG	2 cut(s)	635, 2310
SmoI	CTYRAG	2 cut(s)	635, 2310
SsiI	CCGC	7 cut(s)	51, 366, 381, 741, 794, 1238, 1460
SspDI	GGCGCC	1 cut(s)	377
SspI	AATATT	2 cut(s)	768, 1680
SspMI	CTAG	7 cut(s)	609, 735, 1010, 1437, 1631, 1727, 1787
SstI	GAGCTC	1 cut(s)	2022
StyD4I	CCNGG	5 cut(s)	521, 971, 1999, 2000, 2221
StyI	CCWWGG	1 cut(s)	201
TaaI	ACNGT	3 cut(s)	325, 776, 1655
TaiI	ACGT	5 cut(s)	99, 489, 585, 908, 1862
TatI	WGTACW	3 cut(s)	729, 1338, 1482
TauI	GCSGC	2 cut(s)	53, 383
TfiI	GAWTC	5 cut(s)	752, 1081, 1361, 1599, 1797
Tru1I	TTAA	7 cut(s)	647, 662, 1917, 2049, 2321, 2330, 2383
Tru9I	TTAA	7 cut(s)	647, 662, 1917, 2049, 2321, 2330, 2383
TscAI	CASTG	6 cut(s)	219, 273, 447, 957, 1980, 2122
TseI	GCWGC	5 cut(s)	24, 53, 1220, 1835, 2081
TspGWI	ACGGA	8 cut(s)	54, 139, 277, 319, 384, 469, 1290, 1809
TspMI	CCCGGG	1 cut(s)	2000
TspRI	CASTG	6 cut(s)	219, 273, 447, 957, 1980, 2122
VpaK11BI	GGWCC	1 cut(s)	1462
XapI	RAATTY	4 cut(s)	1093, 1717, 1939, 2140
XbaI	TCTAGA	2 cut(s)	1009, 1436
XceI	RCATGY	5 cut(s)	874, 1033, 1539, 1642, 2046
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2229
XmaI	CCCGGG	1 cut(s)	2000
XmiI	GTMKAC	2 cut(s)	1635, 1965
XmnI	GAANNNNTTC	3 cut(s)	131, 461, 946
XspI	CTAG	7 cut(s)	609, 735, 1010, 1437, 1631, 1727, 1787

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.