RchiOBHm_Chr1g0329891

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0002972
Physical Location & Seq
Reverse (-)
19604165 .. 19606285
2121 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55915

Sequence Viewer

Length: 2121 bp
ATGCCACCGTTGTGTGAACCCTCTCTACTAGCGGCTTTAATACAAAAATGCACCGCCATAAACTCGCTCAGGGAAGCGCGTCGACTCCACGCGCTTCTCCTAACCACCACAACCGTCAGCTCGCGCTCTGTGTTCCTGTACAACAATGTGCTATCTATGTATGCACGGTGCTGCTCGCTCAGAGATGCACGCAATGTGTTCGACGAAATGCCTCTGAGAAGTCTTGTTTCGTTCAATGCGCTGGCTGCAGCCTATTCCCGGAGTTCAGACACTGCCGGTTTGGCATTGACATTGCTAAAACAAATGGGAGTTGAATGTCTCAGGCCAAATGTTTCGACTTTCACGAGTGTGATACAAGCCTCATGTACTCTTGAGGATTGGTTGGTTGGCTCTTTGGTTCATGCACAAGTTGTGAAATGTGGGTTCTTGAATGAAGTGCATCTTCAGACAGCTCTGCTTGGGATGTATTCCAGCTGTGGGGATTTGGTATCTGCTAGCAGAGTTTTCGGAGGAATGGTTGATAGAGATGTTGTGGCTTGGAATTCAATGATTTTCGCGTATTTGAAGAATGGTAAGAACAAGGAAGGGCTTCATTTGTTTGATGGTATGTTGAGGACTGGAGTTATTCCTACTCAGTTCACATATTCAATGGTTTTGAATGTGTGTAGCAGATTGAGATATTTGAATCTGGGGAGAATCATCCATGCCCGAGTCATAGTTTCAAGCACACATGCTGATTTGGCTTTGGAGAATTCACTGCTTGATATGTATTGTAACTCTGGTGACACCCAAGCAGCTTTTAGTGTGTTTAATAAAATGGACAGCCCGGATTTGGTTTCATGGAACACAATGATTGCTGGGTATTCAGAAAATGATGATGGGGAAAAGGCGATGAATTTGTTTGCCCAGTTGAAAAGATTGTGTTATCTTAAACCAGATGAATATACTTATGCAGCTATCATATCTGCAGCAGGTACATACCTTGCTTCTGACTATGGTAAGCTTCTTCATGGTCAAGTCATAAAAGTAGGACTCGAGAAGAGTATATTTGTAGGAACTGCACTAGTGTCTATGTACTTCAAGAACAGCGAAACGGATAGTGCTCAAAAGGCATTTTATTCTATTTCTGAGAAGGATGTTGTTCTCTGGACTGAGATGATCATGGGTTATTCGAGATTGGCTGATGGGGAGAGTGCAATTAAGTTCTTCAAAGAAATGTGCAAGGAAAGCCATAAGGTTGACAGCTTTGCTCTGAGTGGAGTTTTGAGTGCTTGTTCCGACCTGGCCATGTTAAAACAAGGTGAGATGATTCACTCGCAGGCCTTAAAAACAGGATTTGATGTTGAAATGTCTGTATGCGGGAGTCTGGTGGATATGTATGCAAAAAACGGTTGCCTTGAATCTGCTTATTGTATATTTTCCCAAGTTGTGGAGCCTGATTTGAAATGTTGGAACTCGATTCTTGGGGGATATAGTCAACATGGCATGGCAGAAGAAGCATTGAAGCTCTATTTTGAGATCCAAAAACATGGTCTCTTACCAGACCAAGTAACATTTCTGTCTCTACTCTCAGCTTGCAACCACAGTGGGTTGGTTGAAGTAGGAAAGTTCTTGTGGAATTGTATGAAGGAGAATGGTATCCCACCTGGGCCTAAGCACTACTCTTGCATGGTTAGTTTGTTAAGTCGAGCTCGACTACTGAATGAGGCAGAGGAGCTTATTATCAAGTCACCATTTAATGAAGATAATCTTGAACTGTGGAGAACTTTGCTGAGCTCGTGCGTCATCAATAAGAACTTGGAGATAGGAGTTCATGCAGCAGAGCATGTTCTAAAGGTTGATGCAGAAGACAGTGCAACACATATCTTGCTTTCAAATCTCTATGCTGCTGCCGGAAAATGGGATAAGGTTGTAGAAATAAGGAGAAAGATTAAAGAACTGACGTTAGAGAAGGATCCTGGGCTGAGCTGGATTGAGGATAAGAAGAATATTCAGGTATTCAGTTCTGGTGTTCAATCTAAGGAAGAGGTTGGTGAAGCCGAAGATGCACTGCATTGGCTACAAGGAAACATGGTAAGATCTCAAAGAGATGAACTTGATGAACCTATTTATACCACATAG

Protein Analysis

706

Amino Acids

78.28

Weight (kDa)

5.72

Isoelectric Point (pI)

42.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 175 - 223 1.4e-12 PPR repeat family
PPR_2 PF13041 276 - 323 2.2e-10 PPR repeat family
PPR_2 PF13041 378 - 426 3.8e-07 PPR repeat family
PPR_2 PF13041 479 - 526 2.5e-10 PPR repeat family
PPR PF01535 483 - 512 1.5e-06 PPR repeat
E_motif PF20431 599 - 659 5.1e-16 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 962
AccB7I CCANNNNNTGG 1 cut(s) 1429
AccI GTMKAC 1 cut(s) 82
AccII CGCG 4 cut(s) 79, 92, 124, 557
AciI CCGC 3 cut(s) 32, 54, 1359
AclWI GGATC 3 cut(s) 1513, 1949, 1962
AcoI YGGCCR 1 cut(s) 1284
AcsI RAATTY 3 cut(s) 541, 751, 895
AcuI CTGAAG 1 cut(s) 428
AfaI GTAC 4 cut(s) 140, 367, 976, 1076
AfiI CCNNNNNNNGG 5 cut(s) 258, 477, 832, 1429, 1899
AhlI ACTAGT 1 cut(s) 1063
AjnI CCWGG 3 cut(s) 1281, 1645, 1957
AjuI GAANNNNNNNTTGG 2 cut(s) 1539, 1571
AleI CACNNNNGTG 2 cut(s) 10, 347
Alw21I GWGCWC 3 cut(s) 1105, 1693, 1778
Alw26I GTCTC 3 cut(s) 323, 1538, 1566
AlwI GGATC 3 cut(s) 1513, 1949, 1962
AlwNI CAGNNNCTG 1 cut(s) 272
Ama87I CYCGRG 2 cut(s) 708, 1034
AoxI GGCC 4 cut(s) 323, 1284, 1320, 1649
ApeKI GCWGC 9 cut(s) 171, 245, 248, 794, 953, 968, 1817, 1886, 1889
ApoI RAATTY 3 cut(s) 541, 751, 895
ArsI GACNNNNNNTTYG 2 cut(s) 1516, 1548
Asp700I GAANNNNTTC 1 cut(s) 588
AspLEI GCGC 4 cut(s) 79, 94, 126, 241
AspS9I GGNCC 1 cut(s) 1649
AsuC2I CCSGG 2 cut(s) 259, 827
AsuHPI GGTGA 4 cut(s) 794, 1313, 1722, 2045
AsuNHI GCTAGC 1 cut(s) 494
AvaI CYCGRG 2 cut(s) 708, 1034
BalI TGGCCA 1 cut(s) 1286
BamHI GGATCC 1 cut(s) 1954
BanII GRGCYC 2 cut(s) 1693, 1778
BauI CACGAG 2 cut(s) 343, 1777
BbsI GAAGAC 1 cut(s) 1854
Bbv12I GWGCWC 3 cut(s) 1105, 1693, 1778
BbvI GCAGC 9 cut(s) 158, 232, 260, 806, 965, 980, 1829, 1873, 1876
BccI CCATC 3 cut(s) 596, 872, 1178
BcgI CGANNNNNNTGC 4 cut(s) 181, 215, 487, 521
BciT130I CCWGG 3 cut(s) 1283, 1647, 1959
BciVI GTATCC 1 cut(s) 1649
BclI TGATCA 1 cut(s) 1158
BcnI CCSGG 2 cut(s) 259, 827
BcoDI GTCTC 3 cut(s) 323, 1538, 1566
BcuI ACTAGT 1 cut(s) 1063
BfaI CTAG 3 cut(s) 29, 495, 1064
BfmI CTRYAG 2 cut(s) 246, 966
BfuAI ACCTGC 1 cut(s) 962
BfuI GTATCC 1 cut(s) 1649
BglI GCCNNNNNGGC 1 cut(s) 281
BglII AGATCT 1 cut(s) 2078
BlpI GCTNAGC 2 cut(s) 1772, 1964
Bme1390I CCNGG 5 cut(s) 259, 827, 1283, 1647, 1959
BmeT110I CYCGRG 2 cut(s) 708, 1034
BmgT120I GGNCC 1 cut(s) 1649
BmiI GGNNCC 2 cut(s) 1434, 1956
BmrFI CCNGG 5 cut(s) 259, 827, 1283, 1647, 1959
BmrI ACTGGG 1 cut(s) 901
BmsI GCATC 4 cut(s) 175, 448, 1831, 2035
BmtI GCTAGC 1 cut(s) 498
BmuI ACTGGG 1 cut(s) 901
BpiI GAAGAC 1 cut(s) 1854
BpmI CTGGAG 1 cut(s) 639
Bpu10I CCTNAGC 2 cut(s) 68, 1653
Bpu1102I GCTNAGC 2 cut(s) 1772, 1964
BpuEI CTTGAG 1 cut(s) 392
BpuMI CCSGG 2 cut(s) 259, 827
BsaI GGTCTC 1 cut(s) 1538
BsaJI CCNNGG 2 cut(s) 1646, 1958
BsaXI ACNNNNNCTCC 2 cut(s) 501, 531
Bsc4I CCNNNNNNNGG 5 cut(s) 258, 477, 832, 1429, 1899
Bse118I RCCGGY 1 cut(s) 275
Bse1I ACTGG 2 cut(s) 622, 907
Bse3DI GCAATG 2 cut(s) 199, 290
BseBI CCWGG 3 cut(s) 1283, 1647, 1959
BseDI CCNNGG 2 cut(s) 1646, 1958
BseGI GGATG 3 cut(s) 468, 699, 1141
BseLI CCNNNNNNNGG 5 cut(s) 258, 477, 832, 1429, 1899
BseMI GCAATG 2 cut(s) 199, 290
BseNI ACTGG 2 cut(s) 622, 907
BseRI GAGGAG 1 cut(s) 1727
BseXI GCAGC 9 cut(s) 158, 232, 260, 806, 965, 980, 1829, 1873, 1876
BseYI CCCAGC 1 cut(s) 857
BsgI GTGCAG 1 cut(s) 1044
Bsh1236I CGCG 4 cut(s) 79, 92, 124, 557
BshFI GGCC 4 cut(s) 325, 1286, 1322, 1651
BsiHKAI GWGCWC 3 cut(s) 1105, 1693, 1778
BsiHKCI CYCGRG 2 cut(s) 708, 1034
BsiSI CCGG 4 cut(s) 259, 276, 827, 1893
BslI CCNNNNNNNGG 5 cut(s) 258, 477, 832, 1429, 1899
BsmAI GTCTC 3 cut(s) 323, 1538, 1566
BsnI GGCC 4 cut(s) 325, 1286, 1322, 1651
Bso31I GGTCTC 1 cut(s) 1538
BsoBI CYCGRG 2 cut(s) 708, 1034
Bsp1286I GDGCHC 3 cut(s) 1105, 1693, 1778
Bsp1407I TGTACA 1 cut(s) 138
Bsp143I GATC 4 cut(s) 1158, 1518, 1954, 2078
Bsp1720I GCTNAGC 2 cut(s) 1772, 1964
BspACI CCGC 3 cut(s) 32, 54, 1359
BspANI GGCC 4 cut(s) 325, 1286, 1322, 1651
BspFNI CGCG 4 cut(s) 79, 92, 124, 557
BspLI GGNNCC 2 cut(s) 1434, 1956
BspMAI CTGCAG 2 cut(s) 250, 970
BspMI ACCTGC 1 cut(s) 962
BspOI GCTAGC 1 cut(s) 498
BspPI GGATC 3 cut(s) 1513, 1949, 1962
BspTNI GGTCTC 1 cut(s) 1538
BsrDI GCAATG 2 cut(s) 199, 290
BsrFI RCCGGY 1 cut(s) 275
BsrGI TGTACA 1 cut(s) 138
BsrI ACTGG 2 cut(s) 622, 907
BssAI RCCGGY 1 cut(s) 275
BssECI CCNNGG 2 cut(s) 1646, 1958
BssMI GATC 4 cut(s) 1158, 1518, 1954, 2078
BssSI CACGAG 2 cut(s) 343, 1777
Bst2BI CACGAG 2 cut(s) 343, 1777
Bst2UI CCWGG 3 cut(s) 1283, 1647, 1959
Bst4CI ACNGT 7 cut(s) 9, 115, 168, 1391, 1586, 1758, 1853
Bst6I CTCTTC 2 cut(s) 1034, 2019
BstAUI TGTACA 1 cut(s) 138
BstC8I GCNNGC 7 cut(s) 122, 176, 190, 243, 496, 1320, 1576
BstF5I GGATG 3 cut(s) 468, 699, 1141
BstFNI CGCG 4 cut(s) 79, 92, 124, 557
BstHHI GCGC 4 cut(s) 79, 94, 126, 241
BstKTI GATC 4 cut(s) 1161, 1521, 1957, 2081
BstMAI GTCTC 3 cut(s) 323, 1538, 1566
BstMBI GATC 4 cut(s) 1158, 1518, 1954, 2078
BstMWI GCNNNNNNNGC 7 cut(s) 245, 281, 740, 1109, 1227, 1496, 2045
BstNI CCWGG 3 cut(s) 1283, 1647, 1959
BstNSI RCATGY 2 cut(s) 734, 1829
BstSCI CCNGG 5 cut(s) 257, 825, 1281, 1645, 1957
BstSFI CTRYAG 2 cut(s) 246, 966
BstUI CGCG 4 cut(s) 79, 92, 124, 557
BstV1I GCAGC 9 cut(s) 158, 232, 260, 806, 965, 980, 1829, 1873, 1876
BstV2I GAAGAC 1 cut(s) 1854
BstX2I RGATCY 3 cut(s) 1518, 1954, 2078
BstXI CCANNNNNNTGG 1 cut(s) 1529
BstYI RGATCY 3 cut(s) 1518, 1954, 2078
BsuI GTATCC 1 cut(s) 1649
BsuRI GGCC 4 cut(s) 325, 1286, 1322, 1651
BtgZI GCGATG 1 cut(s) 905
BtsCI GGATG 3 cut(s) 468, 699, 1141
BtsI GCAGTG 3 cut(s) 270, 755, 2048
BtsIMutI CAGTG 5 cut(s) 270, 755, 1591, 1858, 2048
BveI ACCTGC 1 cut(s) 962
Cac8I GCNNGC 7 cut(s) 122, 176, 190, 243, 496, 1320, 1576
CaiI CAGNNNCTG 1 cut(s) 272
CfoI GCGC 4 cut(s) 79, 94, 126, 241
Cfr10I RCCGGY 1 cut(s) 275
Cfr13I GGNCC 1 cut(s) 1649
CseI GACGC 2 cut(s) 68, 1771
Csp6I GTAC 4 cut(s) 139, 366, 975, 1075
CspCI CAANNNNNGTGG 2 cut(s) 1567, 1602
CviQI GTAC 4 cut(s) 139, 366, 975, 1075
DpnI GATC 4 cut(s) 1160, 1520, 1956, 2080
DpnII GATC 4 cut(s) 1158, 1518, 1954, 2078
EaeI YGGCCR 1 cut(s) 1284
Eam1104I CTCTTC 2 cut(s) 1034, 2019
EarI CTCTTC 2 cut(s) 1034, 2019
Ecl136II GAGCTC 2 cut(s) 1691, 1776
Eco147I AGGCCT 1 cut(s) 1322
Eco24I GRGCYC 2 cut(s) 1693, 1778
Eco31I GGTCTC 1 cut(s) 1538
Eco53kI GAGCTC 2 cut(s) 1691, 1776
Eco57I CTGAAG 1 cut(s) 428
Eco88I CYCGRG 2 cut(s) 708, 1034
EcoICRI GAGCTC 2 cut(s) 1691, 1776
EcoRI GAATTC 2 cut(s) 541, 751
EcoRII CCWGG 3 cut(s) 1281, 1645, 1957
EcoT38I GRGCYC 2 cut(s) 1693, 1778
FalI AAGNNNNNCTT 4 cut(s) 426, 458, 1734, 1766
FauI CCCGC 1 cut(s) 1352
FbaI TGATCA 1 cut(s) 1158
FblI GTMKAC 1 cut(s) 82
FokI GGATG 3 cut(s) 475, 686, 1148
FriOI GRGCYC 2 cut(s) 1693, 1778
FspBI CTAG 3 cut(s) 29, 495, 1064
GlaI GCGC 4 cut(s) 78, 93, 125, 240
GsaI CCCAGC 1 cut(s) 861
GsuI CTGGAG 1 cut(s) 639
HaeIII GGCC 4 cut(s) 325, 1286, 1322, 1651
HapII CCGG 4 cut(s) 259, 276, 827, 1893
HgaI GACGC 2 cut(s) 68, 1771
HhaI GCGC 4 cut(s) 79, 94, 126, 241
Hin6I GCGC 4 cut(s) 77, 92, 124, 239
HinP1I GCGC 4 cut(s) 77, 92, 124, 239
HincII GTYRAC 3 cut(s) 83, 1240, 1478
HindII GTYRAC 3 cut(s) 83, 1240, 1478
HindIII AAGCTT 1 cut(s) 1001
HinfI GANTC 9 cut(s) 84, 685, 696, 711, 1032, 1309, 1363, 1400, 1459
HpaII CCGG 4 cut(s) 259, 276, 827, 1893
HphI GGTGA 4 cut(s) 794, 1313, 1722, 2045
Hpy166II GTNNAC 5 cut(s) 17, 83, 639, 1240, 1478
Hpy188III TCNNGA 8 cut(s) 343, 371, 427, 1036, 1081, 1147, 1173, 1751
Hpy8I GTNNAC 5 cut(s) 17, 83, 639, 1240, 1478
Hpy99I CGWCG 2 cut(s) 84, 206
HpyAV CCTTC 4 cut(s) 578, 1126, 1621, 1945
HpyCH4III ACNGT 7 cut(s) 9, 115, 168, 1391, 1586, 1758, 1853
HpyCH4IV ACGT 1 cut(s) 1943
HpyF10VI GCNNNNNNNGC 7 cut(s) 245, 281, 740, 1109, 1227, 1496, 2045
HpySE526I ACGT 1 cut(s) 1943
HspAI GCGC 4 cut(s) 77, 92, 124, 239
Ksp22I TGATCA 1 cut(s) 1158
Kzo9I GATC 4 cut(s) 1158, 1518, 1954, 2078
LmnI GCTCC 2 cut(s) 1432, 1714
Lsp1109I GCAGC 9 cut(s) 158, 232, 260, 806, 965, 980, 1829, 1873, 1876
LweI GCATC 4 cut(s) 175, 448, 1831, 2035
MaeI CTAG 3 cut(s) 29, 495, 1064
MaeII ACGT 1 cut(s) 1943
MaeIII GTNAC 4 cut(s) 773, 782, 1549, 1728
MalI GATC 4 cut(s) 1160, 1520, 1956, 2080
MboI GATC 4 cut(s) 1158, 1518, 1954, 2078
MflI RGATCY 3 cut(s) 1518, 1954, 2078
MhlI GDGCHC 3 cut(s) 1105, 1693, 1778
MlsI TGGCCA 1 cut(s) 1286
MluCI AATT 5 cut(s) 541, 751, 895, 1197, 1618
MluNI TGGCCA 1 cut(s) 1286
MlyI GAGTC 4 cut(s) 78, 720, 1026, 1372
MmeI TCCRAC 2 cut(s) 1302, 1430
Mox20I TGGCCA 1 cut(s) 1286
MroXI GAANNNNTTC 1 cut(s) 588
MscI TGGCCA 1 cut(s) 1286
MseI TTAA 9 cut(s) 38, 810, 930, 1200, 1292, 1325, 1682, 1737, 1932
MslI CAYNNNNRTG 2 cut(s) 10, 347
Msp20I TGGCCA 1 cut(s) 1286
MspA1I CMGCKG 1 cut(s) 474
MspI CCGG 4 cut(s) 259, 276, 827, 1893
MspR9I CCNGG 5 cut(s) 259, 827, 1283, 1647, 1959
MvaI CCWGG 3 cut(s) 1283, 1647, 1959
MvnI CGCG 4 cut(s) 79, 92, 124, 557
MwoI GCNNNNNNNGC 7 cut(s) 245, 281, 740, 1109, 1227, 1496, 2045
NciI CCSGG 2 cut(s) 259, 827
NdeII GATC 4 cut(s) 1158, 1518, 1954, 2078
NheI GCTAGC 1 cut(s) 494
NlaIV GGNNCC 2 cut(s) 1434, 1956
NmuCI GTSAC 2 cut(s) 782, 1728
NspI RCATGY 2 cut(s) 734, 1829
OliI CACNNNNGTG 2 cut(s) 10, 347
PaeR7I CTCGAG 1 cut(s) 1034
PceI AGGCCT 1 cut(s) 1322
PcsI WCGNNNNNNNCGW 1 cut(s) 341
PdmI GAANNNNTTC 1 cut(s) 588
PfeI GAWTC 5 cut(s) 685, 696, 1309, 1400, 1459
PflMI CCANNNNNTGG 1 cut(s) 1429
PfoI TCCNGGA 1 cut(s) 257
PleI GAGTC 4 cut(s) 78, 719, 1026, 1371
PpsI GAGTC 4 cut(s) 78, 719, 1026, 1371
Psp124BI GAGCTC 2 cut(s) 1693, 1778
Psp6I CCWGG 3 cut(s) 1281, 1645, 1957
PspFI CCCAGC 1 cut(s) 857
PspGI CCWGG 3 cut(s) 1281, 1645, 1957
PspN4I GGNNCC 2 cut(s) 1434, 1956
PspPI GGNCC 1 cut(s) 1649
PsrI GAACNNNNNNTAC 2 cut(s) 9, 41
PstI CTGCAG 2 cut(s) 250, 970
PstNI CAGNNNCTG 1 cut(s) 272
PsuI RGATCY 3 cut(s) 1518, 1954, 2078
PvuII CAGCTG 1 cut(s) 474
RsaI GTAC 4 cut(s) 140, 367, 976, 1076
RsaNI GTAC 4 cut(s) 139, 366, 975, 1075
RseI CAYNNNNRTG 2 cut(s) 10, 347
SacI GAGCTC 2 cut(s) 1693, 1778
SalI GTCGAC 1 cut(s) 81
SaqAI TTAA 9 cut(s) 38, 810, 930, 1200, 1292, 1325, 1682, 1737, 1932
Sau3AI GATC 4 cut(s) 1158, 1518, 1954, 2078
Sau96I GGNCC 1 cut(s) 1649
SchI GAGTC 4 cut(s) 78, 720, 1026, 1372
ScrFI CCNGG 5 cut(s) 259, 827, 1283, 1647, 1959
SduI GDGCHC 3 cut(s) 1105, 1693, 1778
SfaNI GCATC 4 cut(s) 175, 448, 1831, 2035
SfcI CTRYAG 2 cut(s) 246, 966
Sfr274I CTCGAG 1 cut(s) 1034
SlaI CTCGAG 1 cut(s) 1034
SmiMI CAYNNNNRTG 2 cut(s) 10, 347
SmlI CTYRAG 2 cut(s) 371, 1034
SmoI CTYRAG 2 cut(s) 371, 1034
SpeI ACTAGT 1 cut(s) 1063
Sse9I AATT 5 cut(s) 541, 751, 895, 1197, 1618
SseBI AGGCCT 1 cut(s) 1322
SsiI CCGC 3 cut(s) 32, 54, 1359
SspI AATATT 1 cut(s) 1990
SspMI CTAG 3 cut(s) 29, 495, 1064
SstI GAGCTC 2 cut(s) 1693, 1778
StuI AGGCCT 1 cut(s) 1322
StyD4I CCNGG 5 cut(s) 257, 825, 1281, 1645, 1957
TaaI ACNGT 7 cut(s) 9, 115, 168, 1391, 1586, 1758, 1853
TaiI ACGT 1 cut(s) 1946
TaqI TCGA 8 cut(s) 82, 201, 335, 1035, 1172, 1457, 1687, 1693
TasI AATT 5 cut(s) 541, 751, 895, 1197, 1618
TatI WGTACW 3 cut(s) 138, 365, 1074
TauI GCSGC 1 cut(s) 35
TfiI GAWTC 5 cut(s) 685, 696, 1309, 1400, 1459
Tru1I TTAA 9 cut(s) 38, 810, 930, 1200, 1292, 1325, 1682, 1737, 1932
Tru9I TTAA 9 cut(s) 38, 810, 930, 1200, 1292, 1325, 1682, 1737, 1932
TscAI CASTG 5 cut(s) 277, 762, 1591, 1858, 2055
TseFI GTSAC 2 cut(s) 782, 1728
TseI GCWGC 9 cut(s) 171, 245, 248, 794, 953, 968, 1817, 1886, 1889
Tsp45I GTSAC 2 cut(s) 782, 1728
TspGWI ACGGA 1 cut(s) 1109
TspRI CASTG 5 cut(s) 277, 762, 1591, 1858, 2055
Van91I CCANNNNNTGG 1 cut(s) 1429
XapI RAATTY 3 cut(s) 541, 751, 895
XceI RCATGY 2 cut(s) 734, 1829
XhoI CTCGAG 1 cut(s) 1034
XmiI GTMKAC 1 cut(s) 82
XmnI GAANNNNTTC 1 cut(s) 588
XspI CTAG 3 cut(s) 29, 495, 1064
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.