Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0002972

Physical Location & Seq

Genomic Coordinates Reverse (-)

17480075 .. 17482195

Gene Structure 2121 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G008120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGCCACCGTTGTGTGAACCCTCTCTAGTAGCGGCTTTAATACAAAAATGCACAGCCATAAACTCGCTCAGGGAAGCGCGTCGAATCCACGCGCTTCTCCTAACCACCACAACCGTCAGCTCGCGCTCTGTGTTCCTGTACAACAATGTGCTATCTATGTATACACGGTGCGGCTCGCTCGGAGATGCACGCAAGGTGTTCGACGAAATGCCTCAAAGAAGTCTTGTTTCGTTCAATGCGCTGGCTGCAGCCTATTCCCGGAGTTCAGACACTGCCGGTTTGGCATTGACATTGCTAAAACAAATGGGAGTTGAATGTCTCAGGCCAAATGTTTCGACTTTCACGAGTGTGATACAAGCGTTATGTAATCTTGAGGATTGGTTGGTTGGCTCTTTGGTTCATGCACAAGTTGTGAAATGTGGGTTCTTGAATGAAGTGCATCTTCAGACAGCTCTGCTTGGGATGTATTCCAGCTGTGGGGATTTGGTATCTGCTAGCAGAGTTTTCGGAGGAATGGTTGATAGAGATGTTGTGGCTTGGAATTCGATGATTTTCGGGTATTTGAAGAATGGCAAGAACAAGGAAGGGCTTCATTTGTTTGATGGTATGTTGAGGACTGGAGTTATTCCTACTCAGTTCACATATTCAATGGTTTTGAATGTGTGTAGCAGATTGAGATATTTGAATCTGGGGAAAATCATCCATGCCCGAGTCATAGTTTCAAGCACACATGCTGATTTGGCTTTGGAGAATTCACTGCTTGATATGTATTGTAACTCTGGTGACACCCAAGCAGCTTTTAGTGTGTTTAATAAAATGGACAGCCCGGATTTGGTTTCATGGAACACAATGATTGCTGGGTATTCAGAAAATGAGGATGGGGAAAAGGCTATGAATTTGTTTGCCCGGTTGAAAAGATTGTGTTATCTTAAACCAGATGAATATACTTATGCAGCTATCATATCTGCAGCAGGTACATACCTTGCTTCTGACTATGGTAAGCTTCTTCATGGTCAAGTCATAAAAGTAGGACTCGAGAAGAGTATATTTGTAGGAACTGCACTAGTGTCCATGTACTTCAAGAACAGAGAAACGGATAGTGCTCAAAAGGCATTTTATTCTATTTCTGAGAAGGATGTTGTTCTCTGGACTGAGATGATCATGGGTTATTCAAGATTGGCTGATGGGGAGAGTGCAATTAAGTTCTTCAAAGAAATGTGCAAGGAAAGCCATAAGGTTGACAGCTTTGCTCTGAGTGGAGCTTTGAGTGCTTGTTCTGACCTGGCCATGTTAAAACGAGGTGAGATGATTCACTCGCAGGCCTTAAAAACAGGATTTGATGTTGAAATGTCTGTATGTGGGAGTCTGGTGGATATGTATGCAAAAAACGGTTGCCTTGAATCTGCTTATTGTATATTTTCCCAAGTTGTGGAGCCTGATTTGAAATGTTGGAACTCGATGCTTGGGGGATATAGTCAACATGGCATGGCAGAAGAAGCATTGAAGCTCTTTTTTGAGATCCAAAAACATGGTCTCGTACCAGACCAAGTAACATTTCTGTCTCTACTTTCAGCTTGCAACCACAGTGGGTTGGTTGAAGTAGGAAAGTTCTTGTGGAATTGTATGAAGGAGAATGGTATCCCACCTGGGCCTAAGCACTGCTCTTGCATGGTTAGTTTGTTAGGTCGAGCTCGACTACTGAATGAGGCAGAGGAGCTTATTATCAAGTCACCATTTAATGAAGATAATCTTGAACTGTGGAGAACTTTGCTGAGCTCGTGCGTCATCAATAAGAACTTGGAGATAGGAGTTCATGCAGCAGAGCATGTTCTAAAGGTTGATGCAGAAGACAGTGCAACACATATCTTGCTTTCAAATCTCTATGCTGCTGCCGGAAAATGGGATAAGGTTGTAGAAATAAGGAGAAAGATTAAAGAACTGACGTTAGAGAAGGATCCTGGGCTGAGCTGGATTGAGGATAAGAAGAATATTCAGGTATTCAGTTCTGGTGTTCAATCTAAGGAAGAGGTTGGTGAAGCCGAAGATGCACTGCATTGGCTACAAGGAAACATTGTACGATCTCAAAGAGATGAACTTGATGAACCTATTTATACCACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 PPR PPR_2

Protein Analysis

706

Amino Acids

78.17

Weight (kDa)

5.92

Isoelectric Point (pI)

39.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	175 - 223	7.9e-13	PPR repeat family
PPR_2	PF13041	276 - 323	6.9e-10	PPR repeat family
PPR_2	PF13041	378 - 425	1.5e-06	PPR repeat family
PPR_2	PF13041	479 - 526	8.7e-11	PPR repeat family
PPR	PF01535	483 - 512	6.1e-08	PPR repeat
E_motif	PF20431	599 - 659	5.1e-16	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50420 AT3G50420
fragaria_vesca	FvH4_1g14840
malus_domestica	MD06G1092000.v1.1 MD15G1276000.v1.1
prunus_persica	Prupe.7G142000_v2.0.a1
pyrus_communis	pycom06g08800 pycom15g23890
rosa_chinensis	RchiOBHm_Chr1g0329891 RchiOBHm_Chr2g0103801
rosa_laevigata	RLG00000017261 RLG00000017264 RLG00000029855 RLG00000029861
rosa_multiflora	Rmu_sc0000112.1_g000010 Rmu_sc0000112.1_g000024 Rmu_sc0000112.1_g000025 Rmu_sc0002081.1_g000002 Rmu_sc0002081.1_g000010 Rmu_sc0006774.1_g000014
rosa_roxburghii	Rroxscaffold_2G00139300 Rroxscaffold_2G00139350 Rroxscaffold_4G00320530
rosa_rugosa	Rorug01G0084100 Rorug02G0117300
rosa_samantha	Rh1AG102000 Rh1BG081200 Rh1CG097500 Rh1DG105100 Rh2AG166400 Rh2BG173600 Rh2CG172300 Rh2DG171800
rosa_wichuraiana	Rw0G002030 Rw0G006910 Rw1G008070 Rw1G008120 Rw2G013030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	962
AccB7I	CCANNNNNTGG	1 cut(s)	1429
AccI	GTMKAC	1 cut(s)	161
AccII	CGCG	3 cut(s)	79, 92, 124
AciI	CCGC	2 cut(s)	32, 171
AclWI	GGATC	3 cut(s)	1513, 1949, 1962
AcoI	YGGCCR	1 cut(s)	1284
AcsI	RAATTY	3 cut(s)	541, 751, 895
AcuI	CTGAAG	1 cut(s)	428
AfaI	GTAC	5 cut(s)	140, 976, 1076, 1539, 2076
AfiI	CCNNNNNNNGG	5 cut(s)	258, 477, 832, 1429, 1899
AhlI	ACTAGT	1 cut(s)	1063
AjnI	CCWGG	3 cut(s)	1281, 1645, 1957
AjuI	GAANNNNNNNTTGG	2 cut(s)	1539, 1571
AleI	CACNNNNGTG	2 cut(s)	10, 347
Alw21I	GWGCWC	3 cut(s)	1105, 1693, 1778
Alw26I	GTCTC	3 cut(s)	323, 1538, 1566
AlwI	GGATC	3 cut(s)	1513, 1949, 1962
AlwNI	CAGNNNCTG	1 cut(s)	272
Ama87I	CYCGRG	2 cut(s)	708, 1034
AoxI	GGCC	4 cut(s)	323, 1284, 1320, 1649
ApeKI	GCWGC	8 cut(s)	245, 248, 794, 953, 968, 1817, 1886, 1889
ApoI	RAATTY	3 cut(s)	541, 751, 895
ArsI	GACNNNNNNTTYG	2 cut(s)	1516, 1548
Asp700I	GAANNNNTTC	1 cut(s)	588
AspLEI	GCGC	4 cut(s)	79, 94, 126, 241
AspS9I	GGNCC	1 cut(s)	1649
AsuC2I	CCSGG	3 cut(s)	259, 827, 907
AsuHPI	GGTGA	4 cut(s)	794, 1313, 1722, 2045
AsuNHI	GCTAGC	1 cut(s)	494
AvaI	CYCGRG	2 cut(s)	708, 1034
BaeI	ACNNNNGTAYC	2 cut(s)	344, 377
BalI	TGGCCA	1 cut(s)	1286
BamHI	GGATCC	1 cut(s)	1954
BanII	GRGCYC	2 cut(s)	1693, 1778
BauI	CACGAG	2 cut(s)	343, 1777
BbsI	GAAGAC	1 cut(s)	1854
Bbv12I	GWGCWC	3 cut(s)	1105, 1693, 1778
BbvI	GCAGC	8 cut(s)	232, 260, 806, 965, 980, 1829, 1873, 1876
BccI	CCATC	3 cut(s)	596, 872, 1178
BcgI	CGANNNNNNTGC	4 cut(s)	181, 215, 487, 521
BciT130I	CCWGG	3 cut(s)	1283, 1647, 1959
BciVI	GTATCC	1 cut(s)	1649
BclI	TGATCA	1 cut(s)	1158
BcnI	CCSGG	3 cut(s)	259, 827, 907
BcoDI	GTCTC	3 cut(s)	323, 1538, 1566
BcuI	ACTAGT	1 cut(s)	1063
BfaI	CTAG	3 cut(s)	26, 495, 1064
BfmI	CTRYAG	2 cut(s)	246, 966
BfuAI	ACCTGC	1 cut(s)	962
BfuI	GTATCC	1 cut(s)	1649
BglI	GCCNNNNNGGC	1 cut(s)	281
BlpI	GCTNAGC	2 cut(s)	1772, 1964
Bme1390I	CCNGG	6 cut(s)	259, 827, 907, 1283, 1647, 1959
BmeT110I	CYCGRG	2 cut(s)	708, 1034
BmgT120I	GGNCC	1 cut(s)	1649
BmiI	GGNNCC	2 cut(s)	1434, 1956
BmrFI	CCNGG	6 cut(s)	259, 827, 907, 1283, 1647, 1959
BmsI	GCATC	5 cut(s)	175, 448, 1449, 1831, 2035
BmtI	GCTAGC	1 cut(s)	498
BpiI	GAAGAC	1 cut(s)	1854
BpmI	CTGGAG	1 cut(s)	639
Bpu10I	CCTNAGC	2 cut(s)	68, 1653
Bpu1102I	GCTNAGC	2 cut(s)	1772, 1964
BpuEI	CTTGAG	1 cut(s)	392
BpuMI	CCSGG	3 cut(s)	259, 827, 907
BsaI	GGTCTC	1 cut(s)	1538
BsaJI	CCNNGG	2 cut(s)	1646, 1958
BsaXI	ACNNNNNCTCC	2 cut(s)	501, 531
Bsc4I	CCNNNNNNNGG	5 cut(s)	258, 477, 832, 1429, 1899
Bse118I	RCCGGY	1 cut(s)	275
Bse1I	ACTGG	1 cut(s)	622
Bse3DI	GCAATG	1 cut(s)	290
BseBI	CCWGG	3 cut(s)	1283, 1647, 1959
BseDI	CCNNGG	2 cut(s)	1646, 1958
BseGI	GGATG	4 cut(s)	468, 699, 883, 1141
BseLI	CCNNNNNNNGG	5 cut(s)	258, 477, 832, 1429, 1899
BseMI	GCAATG	1 cut(s)	290
BseMII	CTCAG	8 cut(s)	82, 334, 647, 1119, 1143, 1244, 1763, 1955
BseNI	ACTGG	1 cut(s)	622
BseRI	GAGGAG	1 cut(s)	1727
BseXI	GCAGC	8 cut(s)	232, 260, 806, 965, 980, 1829, 1873, 1876
BseYI	CCCAGC	1 cut(s)	857
BsgI	GTGCAG	1 cut(s)	1044
Bsh1236I	CGCG	3 cut(s)	79, 92, 124
BshFI	GGCC	4 cut(s)	325, 1286, 1322, 1651
BsiHKAI	GWGCWC	3 cut(s)	1105, 1693, 1778
BsiHKCI	CYCGRG	2 cut(s)	708, 1034
BsiSI	CCGG	5 cut(s)	259, 276, 827, 907, 1893
BslI	CCNNNNNNNGG	5 cut(s)	258, 477, 832, 1429, 1899
BsmAI	GTCTC	3 cut(s)	323, 1538, 1566
BsnI	GGCC	4 cut(s)	325, 1286, 1322, 1651
Bso31I	GGTCTC	1 cut(s)	1538
BsoBI	CYCGRG	2 cut(s)	708, 1034
Bsp1286I	GDGCHC	3 cut(s)	1105, 1693, 1778
Bsp1407I	TGTACA	1 cut(s)	138
Bsp143I	GATC	4 cut(s)	1158, 1518, 1954, 2078
Bsp1720I	GCTNAGC	2 cut(s)	1772, 1964
BspACI	CCGC	2 cut(s)	32, 171
BspANI	GGCC	4 cut(s)	325, 1286, 1322, 1651
BspCNI	CTCAG	8 cut(s)	81, 333, 646, 1120, 1144, 1245, 1764, 1956
BspFNI	CGCG	3 cut(s)	79, 92, 124
BspLI	GGNNCC	2 cut(s)	1434, 1956
BspMAI	CTGCAG	2 cut(s)	250, 970
BspMI	ACCTGC	1 cut(s)	962
BspOI	GCTAGC	1 cut(s)	498
BspPI	GGATC	3 cut(s)	1513, 1949, 1962
BspTNI	GGTCTC	1 cut(s)	1538
BsrDI	GCAATG	1 cut(s)	290
BsrFI	RCCGGY	1 cut(s)	275
BsrGI	TGTACA	1 cut(s)	138
BsrI	ACTGG	1 cut(s)	622
BssAI	RCCGGY	1 cut(s)	275
BssECI	CCNNGG	2 cut(s)	1646, 1958
BssMI	GATC	4 cut(s)	1158, 1518, 1954, 2078
BssNAI	GTATAC	1 cut(s)	162
BssSI	CACGAG	2 cut(s)	343, 1777
Bst1107I	GTATAC	1 cut(s)	162
Bst2BI	CACGAG	2 cut(s)	343, 1777
Bst2UI	CCWGG	3 cut(s)	1283, 1647, 1959
Bst4CI	ACNGT	7 cut(s)	9, 115, 168, 1391, 1586, 1758, 1853
Bst6I	CTCTTC	2 cut(s)	1034, 2019
BstAUI	TGTACA	1 cut(s)	138
BstC8I	GCNNGC	7 cut(s)	122, 176, 190, 243, 496, 1320, 1576
BstF5I	GGATG	4 cut(s)	468, 699, 883, 1141
BstFNI	CGCG	3 cut(s)	79, 92, 124
BstHHI	GCGC	4 cut(s)	79, 94, 126, 241
BstKTI	GATC	4 cut(s)	1161, 1521, 1957, 2081
BstMAI	GTCTC	3 cut(s)	323, 1538, 1566
BstMBI	GATC	4 cut(s)	1158, 1518, 1954, 2078
BstMWI	GCNNNNNNNGC	8 cut(s)	245, 281, 740, 1109, 1227, 1268, 1496, 2045
BstNI	CCWGG	3 cut(s)	1283, 1647, 1959
BstNSI	RCATGY	2 cut(s)	734, 1829
BstSCI	CCNGG	6 cut(s)	257, 825, 905, 1281, 1645, 1957
BstSFI	CTRYAG	2 cut(s)	246, 966
BstUI	CGCG	3 cut(s)	79, 92, 124
BstV1I	GCAGC	8 cut(s)	232, 260, 806, 965, 980, 1829, 1873, 1876
BstV2I	GAAGAC	1 cut(s)	1854
BstX2I	RGATCY	2 cut(s)	1518, 1954
BstXI	CCANNNNNNTGG	1 cut(s)	1529
BstYI	RGATCY	2 cut(s)	1518, 1954
BstZ17I	GTATAC	1 cut(s)	162
BsuI	GTATCC	1 cut(s)	1649
BsuRI	GGCC	4 cut(s)	325, 1286, 1322, 1651
BtsCI	GGATG	4 cut(s)	468, 699, 883, 1141
BtsI	GCAGTG	4 cut(s)	270, 755, 1657, 2048
BtsIMutI	CAGTG	6 cut(s)	270, 755, 1591, 1657, 1858, 2048
BveI	ACCTGC	1 cut(s)	962
Cac8I	GCNNGC	7 cut(s)	122, 176, 190, 243, 496, 1320, 1576
CaiI	CAGNNNCTG	1 cut(s)	272
CfoI	GCGC	4 cut(s)	79, 94, 126, 241
Cfr10I	RCCGGY	1 cut(s)	275
Cfr13I	GGNCC	1 cut(s)	1649
CseI	GACGC	2 cut(s)	68, 1771
Csp6I	GTAC	5 cut(s)	139, 975, 1075, 1538, 2075
CspCI	CAANNNNNGTGG	2 cut(s)	1567, 1602
CviQI	GTAC	5 cut(s)	139, 975, 1075, 1538, 2075
DpnI	GATC	4 cut(s)	1160, 1520, 1956, 2080
DpnII	GATC	4 cut(s)	1158, 1518, 1954, 2078
EaeI	YGGCCR	1 cut(s)	1284
Eam1104I	CTCTTC	2 cut(s)	1034, 2019
EarI	CTCTTC	2 cut(s)	1034, 2019
Ecl136II	GAGCTC	2 cut(s)	1691, 1776
Eco147I	AGGCCT	1 cut(s)	1322
Eco24I	GRGCYC	2 cut(s)	1693, 1778
Eco31I	GGTCTC	1 cut(s)	1538
Eco53kI	GAGCTC	2 cut(s)	1691, 1776
Eco57I	CTGAAG	1 cut(s)	428
Eco88I	CYCGRG	2 cut(s)	708, 1034
EcoICRI	GAGCTC	2 cut(s)	1691, 1776
EcoRI	GAATTC	2 cut(s)	541, 751
EcoRII	CCWGG	3 cut(s)	1281, 1645, 1957
EcoT38I	GRGCYC	2 cut(s)	1693, 1778
FalI	AAGNNNNNCTT	4 cut(s)	426, 458, 1734, 1766
FbaI	TGATCA	1 cut(s)	1158
FblI	GTMKAC	1 cut(s)	161
FokI	GGATG	4 cut(s)	475, 686, 890, 1148
FriOI	GRGCYC	2 cut(s)	1693, 1778
FspBI	CTAG	3 cut(s)	26, 495, 1064
GlaI	GCGC	4 cut(s)	78, 93, 125, 240
GsaI	CCCAGC	1 cut(s)	861
GsuI	CTGGAG	1 cut(s)	639
HaeIII	GGCC	4 cut(s)	325, 1286, 1322, 1651
HapII	CCGG	5 cut(s)	259, 276, 827, 907, 1893
HgaI	GACGC	2 cut(s)	68, 1771
HhaI	GCGC	4 cut(s)	79, 94, 126, 241
Hin6I	GCGC	4 cut(s)	77, 92, 124, 239
HinP1I	GCGC	4 cut(s)	77, 92, 124, 239
HincII	GTYRAC	2 cut(s)	1240, 1478
HindII	GTYRAC	2 cut(s)	1240, 1478
HindIII	AAGCTT	1 cut(s)	1001
HinfI	GANTC	7 cut(s)	84, 685, 711, 1032, 1309, 1363, 1400
HpaII	CCGG	5 cut(s)	259, 276, 827, 907, 1893
HphI	GGTGA	4 cut(s)	794, 1313, 1722, 2045
Hpy166II	GTNNAC	5 cut(s)	17, 162, 639, 1240, 1478
Hpy188I	TCNGA	9 cut(s)	182, 268, 447, 509, 868, 991, 1129, 1254, 1279
Hpy188III	TCNNGA	8 cut(s)	343, 371, 427, 1036, 1081, 1147, 1173, 1751
Hpy8I	GTNNAC	5 cut(s)	17, 162, 639, 1240, 1478
Hpy99I	CGWCG	2 cut(s)	84, 206
HpyAV	CCTTC	4 cut(s)	578, 1126, 1621, 1945
HpyCH4III	ACNGT	7 cut(s)	9, 115, 168, 1391, 1586, 1758, 1853
HpyCH4IV	ACGT	1 cut(s)	1943
HpyF10VI	GCNNNNNNNGC	8 cut(s)	245, 281, 740, 1109, 1227, 1268, 1496, 2045
HpySE526I	ACGT	1 cut(s)	1943
HspAI	GCGC	4 cut(s)	77, 92, 124, 239
Ksp22I	TGATCA	1 cut(s)	1158
Kzo9I	GATC	4 cut(s)	1158, 1518, 1954, 2078
LmnI	GCTCC	3 cut(s)	1259, 1432, 1714
Lsp1109I	GCAGC	8 cut(s)	232, 260, 806, 965, 980, 1829, 1873, 1876
LweI	GCATC	5 cut(s)	175, 448, 1449, 1831, 2035
MaeI	CTAG	3 cut(s)	26, 495, 1064
MaeII	ACGT	1 cut(s)	1943
MaeIII	GTNAC	4 cut(s)	773, 782, 1549, 1728
MalI	GATC	4 cut(s)	1160, 1520, 1956, 2080
MboI	GATC	4 cut(s)	1158, 1518, 1954, 2078
MflI	RGATCY	2 cut(s)	1518, 1954
MhlI	GDGCHC	3 cut(s)	1105, 1693, 1778
MlsI	TGGCCA	1 cut(s)	1286
MluCI	AATT	5 cut(s)	541, 751, 895, 1197, 1618
MluNI	TGGCCA	1 cut(s)	1286
MlyI	GAGTC	3 cut(s)	720, 1026, 1372
MmeI	TCCRAC	1 cut(s)	1430
Mox20I	TGGCCA	1 cut(s)	1286
MroXI	GAANNNNTTC	1 cut(s)	588
MscI	TGGCCA	1 cut(s)	1286
MseI	TTAA	8 cut(s)	38, 810, 930, 1200, 1292, 1325, 1737, 1932
MslI	CAYNNNNRTG	2 cut(s)	10, 347
Msp20I	TGGCCA	1 cut(s)	1286
MspA1I	CMGCKG	1 cut(s)	474
MspI	CCGG	5 cut(s)	259, 276, 827, 907, 1893
MspR9I	CCNGG	6 cut(s)	259, 827, 907, 1283, 1647, 1959
MvaI	CCWGG	3 cut(s)	1283, 1647, 1959
MvnI	CGCG	3 cut(s)	79, 92, 124
MwoI	GCNNNNNNNGC	8 cut(s)	245, 281, 740, 1109, 1227, 1268, 1496, 2045
NciI	CCSGG	3 cut(s)	259, 827, 907
NdeII	GATC	4 cut(s)	1158, 1518, 1954, 2078
NheI	GCTAGC	1 cut(s)	494
NlaIV	GGNNCC	2 cut(s)	1434, 1956
NmuCI	GTSAC	2 cut(s)	782, 1728
NspI	RCATGY	2 cut(s)	734, 1829
OliI	CACNNNNGTG	2 cut(s)	10, 347
PaeR7I	CTCGAG	1 cut(s)	1034
PceI	AGGCCT	1 cut(s)	1322
PcsI	WCGNNNNNNNCGW	1 cut(s)	341
PdmI	GAANNNNTTC	1 cut(s)	588
PfeI	GAWTC	4 cut(s)	84, 685, 1309, 1400
PflMI	CCANNNNNTGG	1 cut(s)	1429
PfoI	TCCNGGA	1 cut(s)	257
PleI	GAGTC	3 cut(s)	719, 1026, 1371
PpsI	GAGTC	3 cut(s)	719, 1026, 1371
Psp124BI	GAGCTC	2 cut(s)	1693, 1778
Psp6I	CCWGG	3 cut(s)	1281, 1645, 1957
PspFI	CCCAGC	1 cut(s)	857
PspGI	CCWGG	3 cut(s)	1281, 1645, 1957
PspN4I	GGNNCC	2 cut(s)	1434, 1956
PspPI	GGNCC	1 cut(s)	1649
PstI	CTGCAG	2 cut(s)	250, 970
PstNI	CAGNNNCTG	1 cut(s)	272
PsuI	RGATCY	2 cut(s)	1518, 1954
PvuII	CAGCTG	1 cut(s)	474
RsaI	GTAC	5 cut(s)	140, 976, 1076, 1539, 2076
RsaNI	GTAC	5 cut(s)	139, 975, 1075, 1538, 2075
RseI	CAYNNNNRTG	2 cut(s)	10, 347
SacI	GAGCTC	2 cut(s)	1693, 1778
SaqAI	TTAA	8 cut(s)	38, 810, 930, 1200, 1292, 1325, 1737, 1932
Sau3AI	GATC	4 cut(s)	1158, 1518, 1954, 2078
Sau96I	GGNCC	1 cut(s)	1649
SchI	GAGTC	3 cut(s)	720, 1026, 1372
ScrFI	CCNGG	6 cut(s)	259, 827, 907, 1283, 1647, 1959
SduI	GDGCHC	3 cut(s)	1105, 1693, 1778
SfaNI	GCATC	5 cut(s)	175, 448, 1449, 1831, 2035
SfcI	CTRYAG	2 cut(s)	246, 966
Sfr274I	CTCGAG	1 cut(s)	1034
SlaI	CTCGAG	1 cut(s)	1034
SmiMI	CAYNNNNRTG	2 cut(s)	10, 347
SmlI	CTYRAG	2 cut(s)	371, 1034
SmoI	CTYRAG	2 cut(s)	371, 1034
SpeI	ACTAGT	1 cut(s)	1063
Sse9I	AATT	5 cut(s)	541, 751, 895, 1197, 1618
SseBI	AGGCCT	1 cut(s)	1322
SsiI	CCGC	2 cut(s)	32, 171
SspI	AATATT	1 cut(s)	1990
SspMI	CTAG	3 cut(s)	26, 495, 1064
SstI	GAGCTC	2 cut(s)	1693, 1778
StuI	AGGCCT	1 cut(s)	1322
StyD4I	CCNGG	6 cut(s)	257, 825, 905, 1281, 1645, 1957
TaaI	ACNGT	7 cut(s)	9, 115, 168, 1391, 1586, 1758, 1853
TaiI	ACGT	1 cut(s)	1946
TaqI	TCGA	8 cut(s)	82, 201, 335, 545, 1035, 1457, 1687, 1693
TasI	AATT	5 cut(s)	541, 751, 895, 1197, 1618
TatI	WGTACW	2 cut(s)	138, 1074
TauI	GCSGC	2 cut(s)	35, 174
TfiI	GAWTC	4 cut(s)	84, 685, 1309, 1400
Tru1I	TTAA	8 cut(s)	38, 810, 930, 1200, 1292, 1325, 1737, 1932
Tru9I	TTAA	8 cut(s)	38, 810, 930, 1200, 1292, 1325, 1737, 1932
TscAI	CASTG	6 cut(s)	277, 762, 1591, 1664, 1858, 2055
TseFI	GTSAC	2 cut(s)	782, 1728
TseI	GCWGC	8 cut(s)	245, 248, 794, 953, 968, 1817, 1886, 1889
Tsp45I	GTSAC	2 cut(s)	782, 1728
TspGWI	ACGGA	1 cut(s)	1109
TspRI	CASTG	6 cut(s)	277, 762, 1591, 1664, 1858, 2055
Van91I	CCANNNNNTGG	1 cut(s)	1429
XapI	RAATTY	3 cut(s)	541, 751, 895
XceI	RCATGY	2 cut(s)	734, 1829
XhoI	CTCGAG	1 cut(s)	1034
XmiI	GTMKAC	1 cut(s)	161
XmnI	GAANNNNTTC	1 cut(s)	588
XspI	CTAG	3 cut(s)	26, 495, 1064

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.