Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0002972

Physical Location & Seq

Genomic Coordinates Reverse (-)

15229081 .. 15230994

Gene Structure 1914 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG173600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1914 bp

ATGCCTCAAAGAAGTCTTGTTTCGTTCAATGCGCTGGCTGCAGCCTATTCCCGGAGTTCAGACACTGCTGGTTTGGCATTGACATTGCTAAAACAAATGGGAGTTGAATGTCTCAGGCCAAATGTTTCGACTTTCACGAGTGTGATACAAGCGTCATGTACTCTTGAGGATTGGTTGGTTGGCTCTTTGGTTCATGCACAAGTTGTGAAATGTGGGTTCTTGAATGATGTGTATCTTCAGACAGCTCTGCTTGGGATGTATTCCAGCTGTGGGGATTTGGTATCTGCTAGCAGAGTTTTCGGAGGAATGGTTGATAGAGATGCTGTGGCTTGGAATTCGATGATTTTCGGGTATTTGAAGAATGGTAAGAACAAGGAAGGGCTTCATTTGTTTGATGGTATGTTGAGGACTGGAGTTATTCCTACTCAGTTCACATATTCAATGGCTTTGAATGTGTGTAGCAGATTGAGATATTTGAATCTGGGGAAAATCATCCATGCCCGAGTCATAGTTTCAAGCACACAAGCTGATTTGGCTTTGGAGAATTCACTGCTTGATATGTATTGTAACTCTGGTGACACCCAAGCAGCTTTTAGTGTGTTTAATAAAATGGACAGCCCGGATTTGGTTTCATGGAACACAATGATTGCTGGGTATTCAGAAAATGAGGATGGGGAGAAGGCGATGAATTTGTTTGCCCGGTTGAAAAGATTGTGTTATCTTAAACCAGATGAATATACTTATGCAGCTATCATATCTGCAGCAGGTACATACGTTGCTTCTGACTATGGTAAGCTTCTTCATGCTCAAGTCATAAAAGGAGGACTCGAGAAGGGTATATTTGTAGGAACTGCACTAGTGTCTATGTACTTCAAGAACAGCGAAATGGATAGTGCTCAAATGGCATTTTATTGCATTTCGGAGAAGGATGTTGTTCTCTGGACTGAGATGATCATGGGTTATTCGAGATTGGCTGATGGGGAGAGTGCAATTAAGTTCTTCAAAGAAATGTGCAAGGAAAGCCATCAGTTTGACAGCTTTGCTCTGAGTGGAGCTTTGAGTGCTTGTTCCGACCTGGCCATGTTAAAACAAGGTGAGATGATTCACTCGCAGGCCTTAAAAACAGGATTTGATGTTGAAATGTCTGTATGCGGGAGTCTGGTGGATATGTATGCAAAAAACGGTTGCCTTGAATCTGCTTATTGTATATTTTCTCAAGTTGTGGAGCCTGATTTGAAATGTTGGAACTCGATGCTTGGGGGATATAGTCAACATGGCATGGCAGAAGAAGCATTGAAGCTCTTTTTTGAGATCCAAAAACATGGTCTCGTACCAGACCAAGTAACATTTCTGTCTCTACTCTCAGCTTGCAACCACAGTGGGTTGGTTGAAGTAGGAAAGTTCTTGTGGAATTGTATGAAGGAGAATGGTATCCCACCTGGGCCTAAGCACTGCTCTTGCATGGTTAGTTTGTTAAGTCGAGCTCGACTACTGAATGAGGCAGAGGAACTTATTATCAAGTCACCATTTAATGAAGATAATCTTGAACTGTGGAGAACTTTGCTGAGCTCGTGCGTCATCCATAAGAACTTGGAGATAGGAGTTCATGCAGCAGAGCAGGTTCTAAAGGTTGATGCAGAAGACAGTGCAACACATATCTTGTTTTCAAATCTCTATGCTGCTGCCGGAAAATGGGATAAGGTTGTAGAAATAAGGAGAAAGATTAAAGAACTGACGTTAGAGAAGGATCCTGGGCTGAGCTGGATTGAGGATAAGAAGAATATTCAGGTATTCAGTTCTGGTGTTCAATCTAAGGAAGAGGTTGGTGAAGCCAAAGATGCACTGCATTGGCTACAAGGAAACATGGTAAGATCTCAAAGAGATGAACTTGATGAACCTATTTATACCACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 PPR PPR_2

Protein Analysis

637

Amino Acids

70.47

Weight (kDa)

5.44

Isoelectric Point (pI)

39.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	107 - 154	1.5e-11	PPR repeat family
PPR_2	PF13041	207 - 254	6.1e-10	PPR repeat family
PPR_2	PF13041	309 - 356	4e-06	PPR repeat family
PPR_2	PF13041	410 - 457	7.6e-11	PPR repeat family
PPR	PF01535	414 - 443	5.4e-08	PPR repeat
E_motif	PF20431	528 - 590	1.8e-16	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50420 AT3G50420
fragaria_vesca	FvH4_1g14840
malus_domestica	MD06G1092000.v1.1 MD15G1276000.v1.1
prunus_persica	Prupe.7G142000_v2.0.a1
pyrus_communis	pycom06g08800 pycom15g23890
rosa_chinensis	RchiOBHm_Chr1g0329891 RchiOBHm_Chr2g0103801
rosa_laevigata	RLG00000017261 RLG00000017264 RLG00000029855 RLG00000029861
rosa_multiflora	Rmu_sc0000112.1_g000010 Rmu_sc0000112.1_g000024 Rmu_sc0000112.1_g000025 Rmu_sc0002081.1_g000002 Rmu_sc0002081.1_g000010 Rmu_sc0006774.1_g000014
rosa_roxburghii	Rroxscaffold_2G00139300 Rroxscaffold_2G00139350 Rroxscaffold_4G00320530
rosa_rugosa	Rorug01G0084100 Rorug02G0117300
rosa_samantha	Rh1AG102000 Rh1BG081200 Rh1CG097500 Rh1DG105100 Rh2AG166400 Rh2BG173600 Rh2CG172300 Rh2DG171800
rosa_wichuraiana	Rw0G002030 Rw0G006910 Rw1G008070 Rw1G008120 Rw2G013030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	755, 1609
AciI	CCGC	1 cut(s)	1152
AclWI	GGATC	3 cut(s)	1306, 1742, 1755
AcoI	YGGCCR	1 cut(s)	1077
AcsI	RAATTY	3 cut(s)	334, 544, 688
AcuI	CTGAAG	1 cut(s)	221
AfaI	GTAC	4 cut(s)	160, 769, 869, 1332
AfiI	CCNNNNNNNGG	4 cut(s)	51, 270, 625, 1692
AhlI	ACTAGT	1 cut(s)	856
AjnI	CCWGG	3 cut(s)	1074, 1438, 1750
AjuI	GAANNNNNNNTTGG	2 cut(s)	1332, 1364
AleI	CACNNNNGTG	1 cut(s)	140
Alw21I	GWGCWC	3 cut(s)	898, 1486, 1571
Alw26I	GTCTC	3 cut(s)	116, 1331, 1359
AlwI	GGATC	3 cut(s)	1306, 1742, 1755
AlwNI	CAGNNNCTG	1 cut(s)	65
Ama87I	CYCGRG	2 cut(s)	501, 827
AoxI	GGCC	4 cut(s)	116, 1077, 1113, 1442
ApeKI	GCWGC	8 cut(s)	38, 41, 587, 746, 761, 1610, 1679, 1682
ApoI	RAATTY	3 cut(s)	334, 544, 688
ArsI	GACNNNNNNTTYG	2 cut(s)	1309, 1341
Asp700I	GAANNNNTTC	1 cut(s)	381
AspLEI	GCGC	1 cut(s)	34
AspS9I	GGNCC	1 cut(s)	1442
AsuC2I	CCSGG	3 cut(s)	52, 620, 700
AsuHPI	GGTGA	4 cut(s)	587, 1106, 1515, 1838
AsuNHI	GCTAGC	1 cut(s)	287
AvaI	CYCGRG	2 cut(s)	501, 827
BaeI	ACNNNNGTAYC	4 cut(s)	137, 170, 759, 792
BalI	TGGCCA	1 cut(s)	1079
BamHI	GGATCC	1 cut(s)	1747
BanII	GRGCYC	2 cut(s)	1486, 1571
BauI	CACGAG	2 cut(s)	136, 1570
BbsI	GAAGAC	1 cut(s)	1647
Bbv12I	GWGCWC	3 cut(s)	898, 1486, 1571
BbvI	GCAGC	8 cut(s)	25, 53, 599, 758, 773, 1622, 1666, 1669
BccI	CCATC	4 cut(s)	389, 665, 971, 1032
BcgI	CGANNNNNNTGC	2 cut(s)	280, 314
BciT130I	CCWGG	3 cut(s)	1076, 1440, 1752
BciVI	GTATCC	1 cut(s)	1442
BclI	TGATCA	1 cut(s)	951
BcnI	CCSGG	3 cut(s)	52, 620, 700
BcoDI	GTCTC	3 cut(s)	116, 1331, 1359
BcuI	ACTAGT	1 cut(s)	856
BfaI	CTAG	2 cut(s)	288, 857
BfmI	CTRYAG	2 cut(s)	39, 759
BfuAI	ACCTGC	2 cut(s)	755, 1609
BfuI	GTATCC	1 cut(s)	1442
BglII	AGATCT	1 cut(s)	1871
BisI	GCNGC	8 cut(s)	39, 42, 588, 747, 762, 1611, 1680, 1683
BlpI	GCTNAGC	2 cut(s)	1565, 1757
BlsI	GCNGC	8 cut(s)	40, 43, 589, 748, 763, 1612, 1681, 1684
Bme1390I	CCNGG	6 cut(s)	52, 620, 700, 1076, 1440, 1752
BmeT110I	CYCGRG	2 cut(s)	501, 827
BmgT120I	GGNCC	1 cut(s)	1442
BmiI	GGNNCC	2 cut(s)	1227, 1749
BmrFI	CCNGG	6 cut(s)	52, 620, 700, 1076, 1440, 1752
BmsI	GCATC	4 cut(s)	310, 1242, 1624, 1828
BmtI	GCTAGC	1 cut(s)	291
BpiI	GAAGAC	1 cut(s)	1647
BpmI	CTGGAG	1 cut(s)	432
Bpu10I	CCTNAGC	1 cut(s)	1446
Bpu1102I	GCTNAGC	2 cut(s)	1565, 1757
BpuEI	CTTGAG	3 cut(s)	185, 792, 1200
BpuMI	CCSGG	3 cut(s)	52, 620, 700
BsaBI	GATNNNNATC	1 cut(s)	231
BsaI	GGTCTC	1 cut(s)	1331
BsaJI	CCNNGG	2 cut(s)	1439, 1751
BsaXI	ACNNNNNCTCC	2 cut(s)	294, 324
Bsc4I	CCNNNNNNNGG	4 cut(s)	51, 270, 625, 1692
Bse1I	ACTGG	1 cut(s)	415
Bse3DI	GCAATG	1 cut(s)	83
Bse8I	GATNNNNATC	1 cut(s)	231
BseBI	CCWGG	3 cut(s)	1076, 1440, 1752
BseDI	CCNNGG	2 cut(s)	1439, 1751
BseGI	GGATG	5 cut(s)	261, 492, 676, 934, 1578
BseJI	GATNNNNATC	1 cut(s)	231
BseLI	CCNNNNNNNGG	4 cut(s)	51, 270, 625, 1692
BseMI	GCAATG	1 cut(s)	83
BseMII	CTCAG	7 cut(s)	127, 440, 936, 1037, 1377, 1556, 1748
BseNI	ACTGG	1 cut(s)	415
BseXI	GCAGC	8 cut(s)	25, 53, 599, 758, 773, 1622, 1666, 1669
BseYI	CCCAGC	1 cut(s)	650
BsgI	GTGCAG	1 cut(s)	837
BshFI	GGCC	4 cut(s)	118, 1079, 1115, 1444
BsiHKAI	GWGCWC	3 cut(s)	898, 1486, 1571
BsiHKCI	CYCGRG	2 cut(s)	501, 827
BsiSI	CCGG	4 cut(s)	52, 620, 700, 1686
BslI	CCNNNNNNNGG	4 cut(s)	51, 270, 625, 1692
BsmAI	GTCTC	3 cut(s)	116, 1331, 1359
BsnI	GGCC	4 cut(s)	118, 1079, 1115, 1444
Bso31I	GGTCTC	1 cut(s)	1331
BsoBI	CYCGRG	2 cut(s)	501, 827
Bsp1286I	GDGCHC	3 cut(s)	898, 1486, 1571
Bsp143I	GATC	4 cut(s)	951, 1311, 1747, 1871
Bsp1720I	GCTNAGC	2 cut(s)	1565, 1757
BspACI	CCGC	1 cut(s)	1152
BspANI	GGCC	4 cut(s)	118, 1079, 1115, 1444
BspCNI	CTCAG	7 cut(s)	126, 439, 937, 1038, 1376, 1557, 1749
BspLI	GGNNCC	2 cut(s)	1227, 1749
BspMAI	CTGCAG	2 cut(s)	43, 763
BspMI	ACCTGC	2 cut(s)	755, 1609
BspOI	GCTAGC	1 cut(s)	291
BspPI	GGATC	3 cut(s)	1306, 1742, 1755
BspTNI	GGTCTC	1 cut(s)	1331
BsrDI	GCAATG	1 cut(s)	83
BsrI	ACTGG	1 cut(s)	415
BssECI	CCNNGG	2 cut(s)	1439, 1751
BssMI	GATC	4 cut(s)	951, 1311, 1747, 1871
BssSI	CACGAG	2 cut(s)	136, 1570
Bst2BI	CACGAG	2 cut(s)	136, 1570
Bst2UI	CCWGG	3 cut(s)	1076, 1440, 1752
Bst4CI	ACNGT	4 cut(s)	1184, 1379, 1551, 1646
Bst6I	CTCTTC	1 cut(s)	1812
BstC8I	GCNNGC	4 cut(s)	36, 289, 1113, 1369
BstDEI	CTNAG	9 cut(s)	113, 426, 945, 1046, 1363, 1446, 1565, 1757, 1812
BstF5I	GGATG	5 cut(s)	261, 492, 676, 934, 1578
BstHHI	GCGC	1 cut(s)	34
BstKTI	GATC	4 cut(s)	954, 1314, 1750, 1874
BstMAI	GTCTC	3 cut(s)	116, 1331, 1359
BstMBI	GATC	4 cut(s)	951, 1311, 1747, 1871
BstMWI	GCNNNNNNNGC	8 cut(s)	38, 74, 533, 902, 1020, 1061, 1289, 1838
BstNI	CCWGG	3 cut(s)	1076, 1440, 1752
BstSCI	CCNGG	6 cut(s)	50, 618, 698, 1074, 1438, 1750
BstSFI	CTRYAG	2 cut(s)	39, 759
BstV1I	GCAGC	8 cut(s)	25, 53, 599, 758, 773, 1622, 1666, 1669
BstV2I	GAAGAC	1 cut(s)	1647
BstX2I	RGATCY	3 cut(s)	1311, 1747, 1871
BstXI	CCANNNNNNTGG	1 cut(s)	1322
BstYI	RGATCY	3 cut(s)	1311, 1747, 1871
BsuI	GTATCC	1 cut(s)	1442
BsuRI	GGCC	4 cut(s)	118, 1079, 1115, 1444
BtgZI	GCGATG	1 cut(s)	698
BtsCI	GGATG	5 cut(s)	261, 492, 676, 934, 1578
BtsI	GCAGTG	4 cut(s)	63, 548, 1450, 1841
BtsIMutI	CAGTG	6 cut(s)	63, 548, 1384, 1450, 1651, 1841
BveI	ACCTGC	2 cut(s)	755, 1609
Cac8I	GCNNGC	4 cut(s)	36, 289, 1113, 1369
CaiI	CAGNNNCTG	1 cut(s)	65
CfoI	GCGC	1 cut(s)	34
Cfr13I	GGNCC	1 cut(s)	1442
CseI	GACGC	2 cut(s)	141, 1564
Csp6I	GTAC	4 cut(s)	159, 768, 868, 1331
CspCI	CAANNNNNGTGG	2 cut(s)	1360, 1395
CviQI	GTAC	4 cut(s)	159, 768, 868, 1331
DdeI	CTNAG	9 cut(s)	113, 426, 945, 1046, 1363, 1446, 1565, 1757, 1812
DpnI	GATC	4 cut(s)	953, 1313, 1749, 1873
DpnII	GATC	4 cut(s)	951, 1311, 1747, 1871
EaeI	YGGCCR	1 cut(s)	1077
Eam1104I	CTCTTC	1 cut(s)	1812
EarI	CTCTTC	1 cut(s)	1812
Ecl136II	GAGCTC	2 cut(s)	1484, 1569
Eco147I	AGGCCT	1 cut(s)	1115
Eco24I	GRGCYC	2 cut(s)	1486, 1571
Eco31I	GGTCTC	1 cut(s)	1331
Eco53kI	GAGCTC	2 cut(s)	1484, 1569
Eco57I	CTGAAG	1 cut(s)	221
Eco88I	CYCGRG	2 cut(s)	501, 827
EcoICRI	GAGCTC	2 cut(s)	1484, 1569
EcoRI	GAATTC	2 cut(s)	334, 544
EcoRII	CCWGG	3 cut(s)	1074, 1438, 1750
EcoT38I	GRGCYC	2 cut(s)	1486, 1571
FalI	AAGNNNNNCTT	2 cut(s)	1527, 1559
FauI	CCCGC	1 cut(s)	1145
FbaI	TGATCA	1 cut(s)	951
Fnu4HI	GCNGC	8 cut(s)	39, 42, 588, 747, 762, 1611, 1680, 1683
FokI	GGATG	5 cut(s)	268, 479, 683, 941, 1565
FriOI	GRGCYC	2 cut(s)	1486, 1571
Fsp4HI	GCNGC	8 cut(s)	39, 42, 588, 747, 762, 1611, 1680, 1683
FspBI	CTAG	2 cut(s)	288, 857
GlaI	GCGC	1 cut(s)	33
GluI	GCNGC	8 cut(s)	39, 42, 588, 747, 762, 1611, 1680, 1683
GsaI	CCCAGC	1 cut(s)	654
GsuI	CTGGAG	1 cut(s)	432
HaeIII	GGCC	4 cut(s)	118, 1079, 1115, 1444
HapII	CCGG	4 cut(s)	52, 620, 700, 1686
HgaI	GACGC	2 cut(s)	141, 1564
HhaI	GCGC	1 cut(s)	34
Hin6I	GCGC	1 cut(s)	32
HinP1I	GCGC	1 cut(s)	32
HincII	GTYRAC	1 cut(s)	1271
HindII	GTYRAC	1 cut(s)	1271
HindIII	AAGCTT	1 cut(s)	794
HinfI	GANTC	6 cut(s)	478, 504, 825, 1102, 1156, 1193
HpaII	CCGG	4 cut(s)	52, 620, 700, 1686
HphI	GGTGA	4 cut(s)	587, 1106, 1515, 1838
Hpy166II	GTNNAC	2 cut(s)	432, 1271
Hpy188I	TCNGA	8 cut(s)	61, 240, 302, 661, 784, 922, 1047, 1072
Hpy188III	TCNNGA	8 cut(s)	136, 164, 220, 829, 874, 940, 966, 1544
Hpy8I	GTNNAC	2 cut(s)	432, 1271
HpyAV	CCTTC	6 cut(s)	371, 673, 826, 919, 1414, 1738
HpyCH4III	ACNGT	4 cut(s)	1184, 1379, 1551, 1646
HpyCH4IV	ACGT	2 cut(s)	774, 1736
HpyF10VI	GCNNNNNNNGC	8 cut(s)	38, 74, 533, 902, 1020, 1061, 1289, 1838
HpyF3I	CTNAG	9 cut(s)	113, 426, 945, 1046, 1363, 1446, 1565, 1757, 1812
HpySE526I	ACGT	2 cut(s)	774, 1736
HspAI	GCGC	1 cut(s)	32
Ksp22I	TGATCA	1 cut(s)	951
Kzo9I	GATC	4 cut(s)	951, 1311, 1747, 1871
LmnI	GCTCC	2 cut(s)	1052, 1225
Lsp1109I	GCAGC	8 cut(s)	25, 53, 599, 758, 773, 1622, 1666, 1669
LweI	GCATC	4 cut(s)	310, 1242, 1624, 1828
MaeI	CTAG	2 cut(s)	288, 857
MaeII	ACGT	2 cut(s)	774, 1736
MaeIII	GTNAC	4 cut(s)	566, 575, 1342, 1521
MalI	GATC	4 cut(s)	953, 1313, 1749, 1873
MboI	GATC	4 cut(s)	951, 1311, 1747, 1871
MboII	GAAGA	9 cut(s)	227, 370, 791, 991, 1298, 1547, 1652, 1789, 1829
MflI	RGATCY	3 cut(s)	1311, 1747, 1871
MhlI	GDGCHC	3 cut(s)	898, 1486, 1571
MlsI	TGGCCA	1 cut(s)	1079
MluCI	AATT	5 cut(s)	334, 544, 688, 990, 1411
MluNI	TGGCCA	1 cut(s)	1079
MlyI	GAGTC	3 cut(s)	513, 819, 1165
MmeI	TCCRAC	2 cut(s)	1095, 1223
Mox20I	TGGCCA	1 cut(s)	1079
MroXI	GAANNNNTTC	1 cut(s)	381
MscI	TGGCCA	1 cut(s)	1079
MseI	TTAA	8 cut(s)	603, 723, 993, 1085, 1118, 1475, 1530, 1725
MslI	CAYNNNNRTG	1 cut(s)	140
Msp20I	TGGCCA	1 cut(s)	1079
MspA1I	CMGCKG	1 cut(s)	267
MspI	CCGG	4 cut(s)	52, 620, 700, 1686
MspR9I	CCNGG	6 cut(s)	52, 620, 700, 1076, 1440, 1752
MvaI	CCWGG	3 cut(s)	1076, 1440, 1752
MwoI	GCNNNNNNNGC	8 cut(s)	38, 74, 533, 902, 1020, 1061, 1289, 1838
NciI	CCSGG	3 cut(s)	52, 620, 700
NdeII	GATC	4 cut(s)	951, 1311, 1747, 1871
NheI	GCTAGC	1 cut(s)	287
NlaIV	GGNNCC	2 cut(s)	1227, 1749
NmuCI	GTSAC	2 cut(s)	575, 1521
OliI	CACNNNNGTG	1 cut(s)	140
PaeR7I	CTCGAG	1 cut(s)	827
PceI	AGGCCT	1 cut(s)	1115
PcsI	WCGNNNNNNNCGW	1 cut(s)	134
PdmI	GAANNNNTTC	1 cut(s)	381
PfeI	GAWTC	3 cut(s)	478, 1102, 1193
PfoI	TCCNGGA	1 cut(s)	50
PkrI	GCNGC	8 cut(s)	40, 43, 589, 748, 763, 1612, 1681, 1684
PleI	GAGTC	3 cut(s)	512, 819, 1164
PpsI	GAGTC	3 cut(s)	512, 819, 1164
Psp124BI	GAGCTC	2 cut(s)	1486, 1571
Psp6I	CCWGG	3 cut(s)	1074, 1438, 1750
PspFI	CCCAGC	1 cut(s)	650
PspGI	CCWGG	3 cut(s)	1074, 1438, 1750
PspN4I	GGNNCC	2 cut(s)	1227, 1749
PspPI	GGNCC	1 cut(s)	1442
PstI	CTGCAG	2 cut(s)	43, 763
PstNI	CAGNNNCTG	1 cut(s)	65
PsuI	RGATCY	3 cut(s)	1311, 1747, 1871
PvuII	CAGCTG	1 cut(s)	267
RsaI	GTAC	4 cut(s)	160, 769, 869, 1332
RsaNI	GTAC	4 cut(s)	159, 768, 868, 1331
RseI	CAYNNNNRTG	1 cut(s)	140
SacI	GAGCTC	2 cut(s)	1486, 1571
SaqAI	TTAA	8 cut(s)	603, 723, 993, 1085, 1118, 1475, 1530, 1725
SatI	GCNGC	8 cut(s)	39, 42, 588, 747, 762, 1611, 1680, 1683
Sau3AI	GATC	4 cut(s)	951, 1311, 1747, 1871
Sau96I	GGNCC	1 cut(s)	1442
SchI	GAGTC	3 cut(s)	513, 819, 1165
ScrFI	CCNGG	6 cut(s)	52, 620, 700, 1076, 1440, 1752
SduI	GDGCHC	3 cut(s)	898, 1486, 1571
SfaNI	GCATC	4 cut(s)	310, 1242, 1624, 1828
SfcI	CTRYAG	2 cut(s)	39, 759
Sfr274I	CTCGAG	1 cut(s)	827
SlaI	CTCGAG	1 cut(s)	827
SmiMI	CAYNNNNRTG	1 cut(s)	140
SmlI	CTYRAG	4 cut(s)	164, 807, 827, 1215
SmoI	CTYRAG	4 cut(s)	164, 807, 827, 1215
SpeI	ACTAGT	1 cut(s)	856
Sse9I	AATT	5 cut(s)	334, 544, 688, 990, 1411
SseBI	AGGCCT	1 cut(s)	1115
SsiI	CCGC	1 cut(s)	1152
SspI	AATATT	1 cut(s)	1783
SspMI	CTAG	2 cut(s)	288, 857
SstI	GAGCTC	2 cut(s)	1486, 1571
StuI	AGGCCT	1 cut(s)	1115
StyD4I	CCNGG	6 cut(s)	50, 618, 698, 1074, 1438, 1750
TaaI	ACNGT	4 cut(s)	1184, 1379, 1551, 1646
TaiI	ACGT	2 cut(s)	777, 1739
TaqI	TCGA	7 cut(s)	128, 338, 828, 965, 1250, 1480, 1486
TasI	AATT	5 cut(s)	334, 544, 688, 990, 1411
TatI	WGTACW	2 cut(s)	158, 867
TfiI	GAWTC	3 cut(s)	478, 1102, 1193
Tru1I	TTAA	8 cut(s)	603, 723, 993, 1085, 1118, 1475, 1530, 1725
Tru9I	TTAA	8 cut(s)	603, 723, 993, 1085, 1118, 1475, 1530, 1725
TscAI	CASTG	6 cut(s)	70, 555, 1384, 1457, 1651, 1848
TseFI	GTSAC	2 cut(s)	575, 1521
TseI	GCWGC	8 cut(s)	38, 41, 587, 746, 761, 1610, 1679, 1682
Tsp45I	GTSAC	2 cut(s)	575, 1521
TspRI	CASTG	6 cut(s)	70, 555, 1384, 1457, 1651, 1848
XapI	RAATTY	3 cut(s)	334, 544, 688
XhoI	CTCGAG	1 cut(s)	827
XmnI	GAANNNNTTC	1 cut(s)	381
XspI	CTAG	2 cut(s)	288, 857

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.