Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0002972

Physical Location & Seq

Genomic Coordinates Forward (+)

49224535 .. 49226655

Gene Structure 2121 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00320530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGCCACCGTTGTGTGAACCCTCTTTTGTAGCGGCTTTAATACAAAAATGCACCGCCATAAACTCGCTCGGGGAAGCGCGTCGACTCCACGCGCTTCTCCTCCTAACCACCACAACCGTCGCCTCGCGTTCTGTGTTCCTATACAACAATGTGCTATCTATGTATGCACGGTGCGGCTCGCTAGGAGATGCACGCAAGGTGTTTGACGAAATGCCTCAAAGAAGTCTTGTTTCGTTCAATGCGCTGGCTGCAGCCTATTCTCGGAGTTCAGACACTGCCGGTTTGGCATTGACATTGCTAAAACAAATGGGATTTGAATGTCTCAGGCCAAATGTTTCGACTTTCACGAGTGTGATACAAGCCTCATGTACTCTTGAGGATTGGTTGGTTGGCTCTTTGGTTCATCCACAAGTTGTGAAATGTGGGTTCTTGAATGAAGTGCATCTTCAGACAGCTCTGCTTGGGATGTATTCCAGCTGTGGGGATTTGGTGTCTGCTAGCAGAGTTTTCGGAGGAATGGTTGATAGAGATGTTGTGGCTTGGAATTCGATGATTTTCGGGTATTTGAAGAATGGTAAGAACAAGGAAGGGCTTCATTTGTTTGATGGTATGTTGAGGACTGGAGTTATTCCTACTCAGTTCACATATTCAATGGTTTTGAATGTGTGTAGCAGATTGAGATATTTGAATCTGGGGAAAATCATCCATGCCCGAGTCATAGTTTCAAGCACACATGCTGATTTGGCTTTGGAGAATTCACTGCTTGATATGTATTGTAACTCTGGTGACACCCAAGCAGCTTTTAGTGTGTTTAATAAAATGGACAGCCCGGATTTGGTTTCATGGAACACAATGATTGCTGGGTATTCAGAAAATGAGGATGGGGAAAAGGCGATGAATTTGTTTGCCCGGTTGAAAAGATTGTGTTTTCTTAAACCAGATGAATATACTTATGCAGCTATCATATCTGCAGCAAGTACATACCTTGCTTCTGACTATGGTAACCTTCTTCATGCTCAAGTCATAAAAGTAGGACTCGAGAAGAGTATATTTGTAGGAACTGCACTAGTGTCTATGTACTTCAAGAACAGCGAAACGGATAGTGCTCAAAAGGCATTTTATTCTATTTCTGAGAAGGATGTTGTTCTCTGGACTGAGATGATCATGGGTTATTCGAGATTGGCTGATGGGGAGAGTGCAATTAAGTTCTTCAAAGAAATGTGCAAGGAAAGCCATAAGGTTGACAGCTTTGCTCTGAGTGGAGCTTTGAGTGCTTGTTCCGACCTGGCCATGTTAAAACAAGGTGAGATGATTCACTCGCAAGCCTTAAAAACAGGATTTGATGTTGAAATGTCTGTATGCGGGAGTCTGGTGGATATGTATGCAAAAAACGGTTGCCTTGAATCTGCTTATTGTATATTTTCCCAAGTTGTGGAGCCTGATTTGAAATGTTGGAACTCGATGCTTGGGGGATATAGTCAACATGGCATGGCAGAAGAAGCATTGAAGCTCTTCTTTGAGATCCAAAAACATGGTCTCGTACCAGACCAAGTAACATTTCTGTCTCTACTCTCAGCTTGCAACCACAGTGGGTTGGTTGAAGTAGGAAAGTTCTTGTGGAATTGTATGAAGGAGAATGGTATCCCACCTGGGCCTAAGCACTGCTCTTGCATGGTTAGTTTGTTAAGTCGAGCTCGTAGACTGAATGAGGCAGAGGAACTTATTATCAAGTCACCATTTAATGAAGATAATCTTGAACTGTGGAGAACTTTGCTGAGCTCGTGCGTCATCAATGAGAACTTGGAGATAGGAGTTCATGCAGCAGAGCATGTTCTAAAGGTTGATGCAGAAGACAGTGCAACACATATCTTGCTTTCAAATCTCTATGCTGGTGCCGGAAAATGGGATAAGGTTGTAGAAATAAGGAGAAAGATTAAAGAACTGACGTTAGAGAAGGATCCTGGGCTGAGCTGGATTGAGGATAAGAAGAATATTCATGTATTCAGTTCTGGTCAATCTAAGGAAGAGGTTGGTGAAGCCGAAGATGCACTGCATTGGCTACAAGGAAGCATGGTAAGATCTCAAAGAGATGAACTTGATGAACCTATTTATACCACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 PPR PPR_2

Protein Analysis

706

Amino Acids

78.08

Weight (kDa)

5.64

Isoelectric Point (pI)

41.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	176 - 224	7.9e-13	PPR repeat family
PPR_2	PF13041	277 - 324	8.2e-10	PPR repeat family
PPR_2	PF13041	379 - 426	1.5e-06	PPR repeat family
PPR_2	PF13041	480 - 527	8.7e-11	PPR repeat family
PPR	PF01535	484 - 513	6.1e-08	PPR repeat
E_motif	PF20431	600 - 660	9.4e-16	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50420 AT3G50420
fragaria_vesca	FvH4_1g14840
malus_domestica	MD06G1092000.v1.1 MD15G1276000.v1.1
prunus_persica	Prupe.7G142000_v2.0.a1
pyrus_communis	pycom06g08800 pycom15g23890
rosa_chinensis	RchiOBHm_Chr1g0329891 RchiOBHm_Chr2g0103801
rosa_laevigata	RLG00000017261 RLG00000017264 RLG00000029855 RLG00000029861
rosa_multiflora	Rmu_sc0000112.1_g000010 Rmu_sc0000112.1_g000024 Rmu_sc0000112.1_g000025 Rmu_sc0002081.1_g000002 Rmu_sc0002081.1_g000010 Rmu_sc0006774.1_g000014
rosa_roxburghii	Rroxscaffold_2G00139300 Rroxscaffold_2G00139350 Rroxscaffold_4G00320530
rosa_rugosa	Rorug01G0084100 Rorug02G0117300
rosa_samantha	Rh1AG102000 Rh1BG081200 Rh1CG097500 Rh1DG105100 Rh2AG166400 Rh2BG173600 Rh2CG172300 Rh2DG171800
rosa_wichuraiana	Rw0G002030 Rw0G006910 Rw1G008070 Rw1G008120 Rw2G013030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1892
AccB7I	CCANNNNNTGG	1 cut(s)	1432
AccI	GTMKAC	2 cut(s)	82, 1699
AccII	CGCG	3 cut(s)	79, 92, 127
AciI	CCGC	4 cut(s)	32, 54, 174, 1362
AclWI	GGATC	3 cut(s)	1516, 1952, 1965
AcoI	YGGCCR	1 cut(s)	1287
AcsI	RAATTY	3 cut(s)	544, 754, 898
AcuI	CTGAAG	1 cut(s)	431
AfaI	GTAC	4 cut(s)	370, 979, 1079, 1542
AfiI	CCNNNNNNNGG	5 cut(s)	261, 480, 835, 1432, 1902
AhlI	ACTAGT	1 cut(s)	1066
AjnI	CCWGG	3 cut(s)	1284, 1648, 1960
AjuI	GAANNNNNNNTTGG	2 cut(s)	1542, 1574
AleI	CACNNNNGTG	2 cut(s)	10, 350
Alw21I	GWGCWC	3 cut(s)	1108, 1696, 1781
Alw26I	GTCTC	3 cut(s)	326, 1541, 1569
AlwI	GGATC	3 cut(s)	1516, 1952, 1965
AlwNI	CAGNNNCTG	1 cut(s)	275
Ama87I	CYCGRG	3 cut(s)	68, 711, 1037
AoxI	GGCC	3 cut(s)	326, 1287, 1652
ApeKI	GCWGC	6 cut(s)	248, 251, 797, 956, 971, 1820
ApoI	RAATTY	3 cut(s)	544, 754, 898
ArsI	GACNNNNNNTTYG	2 cut(s)	1519, 1551
Asp700I	GAANNNNTTC	2 cut(s)	591, 1511
AspLEI	GCGC	3 cut(s)	79, 94, 244
AspS9I	GGNCC	1 cut(s)	1652
AsuC2I	CCSGG	2 cut(s)	830, 910
AsuHPI	GGTGA	4 cut(s)	797, 1316, 1725, 2045
AsuNHI	GCTAGC	1 cut(s)	497
AvaI	CYCGRG	3 cut(s)	68, 711, 1037
BalI	TGGCCA	1 cut(s)	1289
BamHI	GGATCC	1 cut(s)	1957
BanI	GGYRCC	1 cut(s)	1892
BanII	GRGCYC	2 cut(s)	1696, 1781
BauI	CACGAG	2 cut(s)	346, 1780
BbsI	GAAGAC	1 cut(s)	1857
Bbv12I	GWGCWC	3 cut(s)	1108, 1696, 1781
BbvI	GCAGC	6 cut(s)	235, 263, 809, 968, 983, 1832
BccI	CCATC	3 cut(s)	599, 875, 1181
BcgI	CGANNNNNNTGC	2 cut(s)	490, 524
BciT130I	CCWGG	3 cut(s)	1286, 1650, 1962
BciVI	GTATCC	1 cut(s)	1652
BclI	TGATCA	1 cut(s)	1161
BcnI	CCSGG	2 cut(s)	830, 910
BcoDI	GTCTC	3 cut(s)	326, 1541, 1569
BcuI	ACTAGT	1 cut(s)	1066
BfaI	CTAG	3 cut(s)	182, 498, 1067
BfmI	CTRYAG	2 cut(s)	249, 969
BfuI	GTATCC	1 cut(s)	1652
BglI	GCCNNNNNGGC	1 cut(s)	284
BglII	AGATCT	1 cut(s)	2078
BisI	GCNGC	8 cut(s)	33, 175, 249, 252, 798, 957, 972, 1821
BlpI	GCTNAGC	2 cut(s)	1775, 1967
BlsI	GCNGC	8 cut(s)	34, 176, 250, 253, 799, 958, 973, 1822
Bme1390I	CCNGG	5 cut(s)	830, 910, 1286, 1650, 1962
BmeT110I	CYCGRG	3 cut(s)	68, 711, 1037
BmgT120I	GGNCC	1 cut(s)	1652
BmiI	GGNNCC	3 cut(s)	1437, 1894, 1959
BmrFI	CCNGG	5 cut(s)	830, 910, 1286, 1650, 1962
BmsI	GCATC	5 cut(s)	178, 451, 1452, 1834, 2035
BmtI	GCTAGC	1 cut(s)	501
BpiI	GAAGAC	1 cut(s)	1857
BpmI	CTGGAG	1 cut(s)	642
Bpu10I	CCTNAGC	1 cut(s)	1656
Bpu1102I	GCTNAGC	2 cut(s)	1775, 1967
BpuEI	CTTGAG	2 cut(s)	395, 1002
BpuMI	CCSGG	2 cut(s)	830, 910
BsaI	GGTCTC	1 cut(s)	1541
BsaJI	CCNNGG	2 cut(s)	1649, 1961
BsaXI	ACNNNNNCTCC	2 cut(s)	504, 534
Bsc4I	CCNNNNNNNGG	5 cut(s)	261, 480, 835, 1432, 1902
Bse118I	RCCGGY	1 cut(s)	278
Bse1I	ACTGG	1 cut(s)	625
Bse3DI	GCAATG	1 cut(s)	293
BseBI	CCWGG	3 cut(s)	1286, 1650, 1962
BseDI	CCNNGG	2 cut(s)	1649, 1961
BseGI	GGATG	5 cut(s)	403, 471, 702, 886, 1144
BseLI	CCNNNNNNNGG	5 cut(s)	261, 480, 835, 1432, 1902
BseMI	GCAATG	1 cut(s)	293
BseMII	CTCAG	8 cut(s)	337, 650, 1122, 1146, 1247, 1587, 1766, 1958
BseNI	ACTGG	1 cut(s)	625
BseRI	GAGGAG	1 cut(s)	89
BseXI	GCAGC	6 cut(s)	235, 263, 809, 968, 983, 1832
BseYI	CCCAGC	1 cut(s)	860
BsgI	GTGCAG	1 cut(s)	1047
Bsh1236I	CGCG	3 cut(s)	79, 92, 127
BshFI	GGCC	3 cut(s)	328, 1289, 1654
BshNI	GGYRCC	1 cut(s)	1892
BsiHKAI	GWGCWC	3 cut(s)	1108, 1696, 1781
BsiHKCI	CYCGRG	3 cut(s)	68, 711, 1037
BsiSI	CCGG	4 cut(s)	279, 830, 910, 1896
BslI	CCNNNNNNNGG	5 cut(s)	261, 480, 835, 1432, 1902
BsmAI	GTCTC	3 cut(s)	326, 1541, 1569
BsnI	GGCC	3 cut(s)	328, 1289, 1654
Bso31I	GGTCTC	1 cut(s)	1541
BsoBI	CYCGRG	3 cut(s)	68, 711, 1037
Bsp1286I	GDGCHC	3 cut(s)	1108, 1696, 1781
Bsp143I	GATC	4 cut(s)	1161, 1521, 1957, 2078
Bsp1720I	GCTNAGC	2 cut(s)	1775, 1967
BspACI	CCGC	4 cut(s)	32, 54, 174, 1362
BspANI	GGCC	3 cut(s)	328, 1289, 1654
BspCNI	CTCAG	8 cut(s)	336, 649, 1123, 1147, 1248, 1586, 1767, 1959
BspFNI	CGCG	3 cut(s)	79, 92, 127
BspLI	GGNNCC	3 cut(s)	1437, 1894, 1959
BspMAI	CTGCAG	2 cut(s)	253, 973
BspOI	GCTAGC	1 cut(s)	501
BspPI	GGATC	3 cut(s)	1516, 1952, 1965
BspQI	GCTCTTC	1 cut(s)	1517
BspT107I	GGYRCC	1 cut(s)	1892
BspTNI	GGTCTC	1 cut(s)	1541
BsrDI	GCAATG	1 cut(s)	293
BsrFI	RCCGGY	1 cut(s)	278
BsrI	ACTGG	1 cut(s)	625
BssAI	RCCGGY	1 cut(s)	278
BssECI	CCNNGG	2 cut(s)	1649, 1961
BssMI	GATC	4 cut(s)	1161, 1521, 1957, 2078
BssSI	CACGAG	2 cut(s)	346, 1780
Bst2BI	CACGAG	2 cut(s)	346, 1780
Bst2UI	CCWGG	3 cut(s)	1286, 1650, 1962
Bst4CI	ACNGT	7 cut(s)	9, 118, 171, 1394, 1589, 1761, 1856
Bst6I	CTCTTC	3 cut(s)	1037, 1517, 2019
BstC8I	GCNNGC	6 cut(s)	179, 193, 246, 499, 1323, 1579
BstEII	GGTNACC	1 cut(s)	1001
BstF5I	GGATG	5 cut(s)	403, 471, 702, 886, 1144
BstFNI	CGCG	3 cut(s)	79, 92, 127
BstHHI	GCGC	3 cut(s)	79, 94, 244
BstKTI	GATC	4 cut(s)	1164, 1524, 1960, 2081
BstMAI	GTCTC	3 cut(s)	326, 1541, 1569
BstMBI	GATC	4 cut(s)	1161, 1521, 1957, 2078
BstMWI	GCNNNNNNNGC	8 cut(s)	248, 284, 743, 1112, 1230, 1271, 1499, 2045
BstNI	CCWGG	3 cut(s)	1286, 1650, 1962
BstNSI	RCATGY	2 cut(s)	737, 1832
BstPI	GGTNACC	1 cut(s)	1001
BstSCI	CCNGG	5 cut(s)	828, 908, 1284, 1648, 1960
BstSFI	CTRYAG	2 cut(s)	249, 969
BstUI	CGCG	3 cut(s)	79, 92, 127
BstV1I	GCAGC	6 cut(s)	235, 263, 809, 968, 983, 1832
BstV2I	GAAGAC	1 cut(s)	1857
BstX2I	RGATCY	3 cut(s)	1521, 1957, 2078
BstXI	CCANNNNNNTGG	1 cut(s)	1532
BstYI	RGATCY	3 cut(s)	1521, 1957, 2078
BsuI	GTATCC	1 cut(s)	1652
BsuRI	GGCC	3 cut(s)	328, 1289, 1654
BtgZI	GCGATG	1 cut(s)	908
BtsCI	GGATG	5 cut(s)	403, 471, 702, 886, 1144
BtsI	GCAGTG	4 cut(s)	273, 758, 1660, 2048
BtsIMutI	CAGTG	6 cut(s)	273, 758, 1594, 1660, 1861, 2048
Cac8I	GCNNGC	6 cut(s)	179, 193, 246, 499, 1323, 1579
CaiI	CAGNNNCTG	1 cut(s)	275
CfoI	GCGC	3 cut(s)	79, 94, 244
Cfr10I	RCCGGY	1 cut(s)	278
Cfr13I	GGNCC	1 cut(s)	1652
CseI	GACGC	2 cut(s)	68, 1774
Csp6I	GTAC	4 cut(s)	369, 978, 1078, 1541
CspCI	CAANNNNNGTGG	2 cut(s)	1570, 1605
CviQI	GTAC	4 cut(s)	369, 978, 1078, 1541
DpnI	GATC	4 cut(s)	1163, 1523, 1959, 2080
DpnII	GATC	4 cut(s)	1161, 1521, 1957, 2078
EaeI	YGGCCR	1 cut(s)	1287
Eam1104I	CTCTTC	3 cut(s)	1037, 1517, 2019
EarI	CTCTTC	3 cut(s)	1037, 1517, 2019
Ecl136II	GAGCTC	2 cut(s)	1694, 1779
Eco24I	GRGCYC	2 cut(s)	1696, 1781
Eco31I	GGTCTC	1 cut(s)	1541
Eco53kI	GAGCTC	2 cut(s)	1694, 1779
Eco57I	CTGAAG	1 cut(s)	431
Eco88I	CYCGRG	3 cut(s)	68, 711, 1037
Eco91I	GGTNACC	1 cut(s)	1001
EcoICRI	GAGCTC	2 cut(s)	1694, 1779
EcoO65I	GGTNACC	1 cut(s)	1001
EcoRI	GAATTC	2 cut(s)	544, 754
EcoRII	CCWGG	3 cut(s)	1284, 1648, 1960
EcoT38I	GRGCYC	2 cut(s)	1696, 1781
FalI	AAGNNNNNCTT	6 cut(s)	429, 461, 1499, 1531, 1737, 1769
FauI	CCCGC	1 cut(s)	1355
FbaI	TGATCA	1 cut(s)	1161
FblI	GTMKAC	2 cut(s)	82, 1699
Fnu4HI	GCNGC	8 cut(s)	33, 175, 249, 252, 798, 957, 972, 1821
FokI	GGATG	5 cut(s)	390, 478, 689, 893, 1151
FriOI	GRGCYC	2 cut(s)	1696, 1781
Fsp4HI	GCNGC	8 cut(s)	33, 175, 249, 252, 798, 957, 972, 1821
FspBI	CTAG	3 cut(s)	182, 498, 1067
GlaI	GCGC	3 cut(s)	78, 93, 243
GluI	GCNGC	8 cut(s)	33, 175, 249, 252, 798, 957, 972, 1821
GsaI	CCCAGC	1 cut(s)	864
GsuI	CTGGAG	1 cut(s)	642
HaeIII	GGCC	3 cut(s)	328, 1289, 1654
HapII	CCGG	4 cut(s)	279, 830, 910, 1896
HgaI	GACGC	2 cut(s)	68, 1774
HhaI	GCGC	3 cut(s)	79, 94, 244
Hin6I	GCGC	3 cut(s)	77, 92, 242
HinP1I	GCGC	3 cut(s)	77, 92, 242
HincII	GTYRAC	3 cut(s)	83, 1243, 1481
HindII	GTYRAC	3 cut(s)	83, 1243, 1481
HinfI	GANTC	7 cut(s)	84, 688, 714, 1035, 1312, 1366, 1403
HpaII	CCGG	4 cut(s)	279, 830, 910, 1896
HphI	GGTGA	4 cut(s)	797, 1316, 1725, 2045
Hpy166II	GTNNAC	6 cut(s)	17, 83, 642, 1243, 1481, 1700
Hpy188I	TCNGA	9 cut(s)	264, 271, 450, 512, 871, 994, 1132, 1257, 1282
Hpy188III	TCNNGA	8 cut(s)	346, 374, 430, 1039, 1084, 1150, 1176, 1754
Hpy8I	GTNNAC	6 cut(s)	17, 83, 642, 1243, 1481, 1700
Hpy99I	CGWCG	2 cut(s)	84, 122
HpyAV	CCTTC	5 cut(s)	581, 1016, 1129, 1624, 1948
HpyCH4III	ACNGT	7 cut(s)	9, 118, 171, 1394, 1589, 1761, 1856
HpyCH4IV	ACGT	1 cut(s)	1946
HpyF10VI	GCNNNNNNNGC	8 cut(s)	248, 284, 743, 1112, 1230, 1271, 1499, 2045
HpySE526I	ACGT	1 cut(s)	1946
HspAI	GCGC	3 cut(s)	77, 92, 242
Ksp22I	TGATCA	1 cut(s)	1161
Kzo9I	GATC	4 cut(s)	1161, 1521, 1957, 2078
LguI	GCTCTTC	1 cut(s)	1517
LmnI	GCTCC	2 cut(s)	1262, 1435
Lsp1109I	GCAGC	6 cut(s)	235, 263, 809, 968, 983, 1832
LweI	GCATC	5 cut(s)	178, 451, 1452, 1834, 2035
MaeI	CTAG	3 cut(s)	182, 498, 1067
MaeII	ACGT	1 cut(s)	1946
MaeIII	GTNAC	5 cut(s)	776, 785, 1001, 1552, 1731
MalI	GATC	4 cut(s)	1163, 1523, 1959, 2080
MboI	GATC	4 cut(s)	1161, 1521, 1957, 2078
MflI	RGATCY	3 cut(s)	1521, 1957, 2078
MhlI	GDGCHC	3 cut(s)	1108, 1696, 1781
MlsI	TGGCCA	1 cut(s)	1289
MluCI	AATT	5 cut(s)	544, 754, 898, 1200, 1621
MluNI	TGGCCA	1 cut(s)	1289
MlyI	GAGTC	4 cut(s)	78, 723, 1029, 1375
MmeI	TCCRAC	2 cut(s)	1305, 1433
Mox20I	TGGCCA	1 cut(s)	1289
MroXI	GAANNNNTTC	2 cut(s)	591, 1511
MscI	TGGCCA	1 cut(s)	1289
MseI	TTAA	9 cut(s)	38, 813, 933, 1203, 1295, 1328, 1685, 1740, 1935
MslI	CAYNNNNRTG	2 cut(s)	10, 350
Msp20I	TGGCCA	1 cut(s)	1289
MspA1I	CMGCKG	1 cut(s)	477
MspI	CCGG	4 cut(s)	279, 830, 910, 1896
MspR9I	CCNGG	5 cut(s)	830, 910, 1286, 1650, 1962
MvaI	CCWGG	3 cut(s)	1286, 1650, 1962
MvnI	CGCG	3 cut(s)	79, 92, 127
MwoI	GCNNNNNNNGC	8 cut(s)	248, 284, 743, 1112, 1230, 1271, 1499, 2045
NciI	CCSGG	2 cut(s)	830, 910
NdeII	GATC	4 cut(s)	1161, 1521, 1957, 2078
NheI	GCTAGC	1 cut(s)	497
NlaIV	GGNNCC	3 cut(s)	1437, 1894, 1959
NmuCI	GTSAC	2 cut(s)	785, 1731
NspI	RCATGY	2 cut(s)	737, 1832
OliI	CACNNNNGTG	2 cut(s)	10, 350
PaeR7I	CTCGAG	1 cut(s)	1037
PciSI	GCTCTTC	1 cut(s)	1517
PcsI	WCGNNNNNNNCGW	1 cut(s)	344
PdmI	GAANNNNTTC	2 cut(s)	591, 1511
PfeI	GAWTC	3 cut(s)	688, 1312, 1403
PflMI	CCANNNNNTGG	1 cut(s)	1432
PkrI	GCNGC	8 cut(s)	34, 176, 250, 253, 799, 958, 973, 1822
PleI	GAGTC	4 cut(s)	78, 722, 1029, 1374
PpsI	GAGTC	4 cut(s)	78, 722, 1029, 1374
Psp124BI	GAGCTC	2 cut(s)	1696, 1781
Psp6I	CCWGG	3 cut(s)	1284, 1648, 1960
PspEI	GGTNACC	1 cut(s)	1001
PspFI	CCCAGC	1 cut(s)	860
PspGI	CCWGG	3 cut(s)	1284, 1648, 1960
PspN4I	GGNNCC	3 cut(s)	1437, 1894, 1959
PspPI	GGNCC	1 cut(s)	1652
PstI	CTGCAG	2 cut(s)	253, 973
PstNI	CAGNNNCTG	1 cut(s)	275
PsuI	RGATCY	3 cut(s)	1521, 1957, 2078
PvuII	CAGCTG	1 cut(s)	477
RsaI	GTAC	4 cut(s)	370, 979, 1079, 1542
RsaNI	GTAC	4 cut(s)	369, 978, 1078, 1541
RseI	CAYNNNNRTG	2 cut(s)	10, 350
SacI	GAGCTC	2 cut(s)	1696, 1781
SalI	GTCGAC	1 cut(s)	81
SapI	GCTCTTC	1 cut(s)	1517
SaqAI	TTAA	9 cut(s)	38, 813, 933, 1203, 1295, 1328, 1685, 1740, 1935
SatI	GCNGC	8 cut(s)	33, 175, 249, 252, 798, 957, 972, 1821
Sau3AI	GATC	4 cut(s)	1161, 1521, 1957, 2078
Sau96I	GGNCC	1 cut(s)	1652
SchI	GAGTC	4 cut(s)	78, 723, 1029, 1375
ScrFI	CCNGG	5 cut(s)	830, 910, 1286, 1650, 1962
SduI	GDGCHC	3 cut(s)	1108, 1696, 1781
SfaNI	GCATC	5 cut(s)	178, 451, 1452, 1834, 2035
SfcI	CTRYAG	2 cut(s)	249, 969
Sfr274I	CTCGAG	1 cut(s)	1037
SlaI	CTCGAG	1 cut(s)	1037
SmiMI	CAYNNNNRTG	2 cut(s)	10, 350
SmlI	CTYRAG	3 cut(s)	374, 1017, 1037
SmoI	CTYRAG	3 cut(s)	374, 1017, 1037
SpeI	ACTAGT	1 cut(s)	1066
Sse9I	AATT	5 cut(s)	544, 754, 898, 1200, 1621
SsiI	CCGC	4 cut(s)	32, 54, 174, 1362
SspI	AATATT	1 cut(s)	1993
SspMI	CTAG	3 cut(s)	182, 498, 1067
SstI	GAGCTC	2 cut(s)	1696, 1781
StyD4I	CCNGG	5 cut(s)	828, 908, 1284, 1648, 1960
TaaI	ACNGT	7 cut(s)	9, 118, 171, 1394, 1589, 1761, 1856
TaiI	ACGT	1 cut(s)	1949
TaqI	TCGA	7 cut(s)	82, 338, 548, 1038, 1175, 1460, 1690
TasI	AATT	5 cut(s)	544, 754, 898, 1200, 1621
TatI	WGTACW	3 cut(s)	368, 977, 1077
TauI	GCSGC	2 cut(s)	35, 177
TfiI	GAWTC	3 cut(s)	688, 1312, 1403
Tru1I	TTAA	9 cut(s)	38, 813, 933, 1203, 1295, 1328, 1685, 1740, 1935
Tru9I	TTAA	9 cut(s)	38, 813, 933, 1203, 1295, 1328, 1685, 1740, 1935
TscAI	CASTG	6 cut(s)	280, 765, 1594, 1667, 1861, 2055
TseFI	GTSAC	2 cut(s)	785, 1731
TseI	GCWGC	6 cut(s)	248, 251, 797, 956, 971, 1820
Tsp45I	GTSAC	2 cut(s)	785, 1731
TspGWI	ACGGA	1 cut(s)	1112
TspRI	CASTG	6 cut(s)	280, 765, 1594, 1667, 1861, 2055
Van91I	CCANNNNNTGG	1 cut(s)	1432
XapI	RAATTY	3 cut(s)	544, 754, 898
XceI	RCATGY	2 cut(s)	737, 1832
XhoI	CTCGAG	1 cut(s)	1037
XmiI	GTMKAC	2 cut(s)	82, 1699
XmnI	GAANNNNTTC	2 cut(s)	591, 1511
XspI	CTAG	3 cut(s)	182, 498, 1067

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.