Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G50420 AT3G50420 |
| fragaria_vesca | FvH4_1g14840 |
| malus_domestica | MD06G1092000.v1.1 MD15G1276000.v1.1 |
| prunus_persica | Prupe.7G142000_v2.0.a1 |
| pyrus_communis | pycom06g08800 pycom15g23890 |
| rosa_chinensis | RchiOBHm_Chr1g0329891 RchiOBHm_Chr2g0103801 |
| rosa_laevigata | RLG00000017261 RLG00000017264 RLG00000029855 RLG00000029861 |
| rosa_multiflora | Rmu_sc0000112.1_g000010 Rmu_sc0000112.1_g000024 Rmu_sc0000112.1_g000025 Rmu_sc0002081.1_g000002 Rmu_sc0002081.1_g000010 Rmu_sc0006774.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00139300 Rroxscaffold_2G00139350 Rroxscaffold_4G00320530 |
| rosa_rugosa | Rorug01G0084100 Rorug02G0117300 |
| rosa_samantha | Rh1AG102000 Rh1BG081200 Rh1CG097500 Rh1DG105100 Rh2AG166400 Rh2BG173600 Rh2CG172300 Rh2DG171800 |
| rosa_wichuraiana | Rw0G002030 Rw0G006910 Rw1G008070 Rw1G008120 Rw2G013030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 266 |
| AciI | CCGC | 1 cut(s) | 7 |
| AcsI | RAATTY | 2 cut(s) | 55, 199 |
| AfaI | GTAC | 1 cut(s) | 280 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 136 |
| AgsI | TTSAA | 1 cut(s) | 217 |
| AluBI | AGCT | 3 cut(s) | 101, 260, 307 |
| AluI | AGCT | 3 cut(s) | 101, 260, 307 |
| Ama87I | CYCGRG | 1 cut(s) | 338 |
| ApeKI | GCWGC | 3 cut(s) | 98, 257, 272 |
| ApoI | RAATTY | 2 cut(s) | 55, 199 |
| AsuC2I | CCSGG | 2 cut(s) | 131, 211 |
| AvaI | CYCGRG | 1 cut(s) | 338 |
| BbvI | GCAGC | 3 cut(s) | 110, 269, 284 |
| BccI | CCATC | 1 cut(s) | 176 |
| BcnI | CCSGG | 2 cut(s) | 131, 211 |
| BfmI | CTRYAG | 1 cut(s) | 270 |
| BfuAI | ACCTGC | 1 cut(s) | 266 |
| BisI | GCNGC | 3 cut(s) | 99, 258, 273 |
| BlsI | GCNGC | 3 cut(s) | 100, 259, 274 |
| Bme1390I | CCNGG | 2 cut(s) | 131, 211 |
| BmeT110I | CYCGRG | 1 cut(s) | 338 |
| BmrFI | CCNGG | 2 cut(s) | 131, 211 |
| Bpu10I | CCTNAGC | 1 cut(s) | 21 |
| BpuMI | CCSGG | 2 cut(s) | 131, 211 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 136 |
| BseGI | GGATG | 1 cut(s) | 187 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 136 |
| BseMII | CTCAG | 1 cut(s) | 35 |
| BseXI | GCAGC | 3 cut(s) | 110, 269, 284 |
| BseYI | CCCAGC | 1 cut(s) | 161 |
| BsiHKCI | CYCGRG | 1 cut(s) | 338 |
| BsiSI | CCGG | 2 cut(s) | 131, 211 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 136 |
| BsoBI | CYCGRG | 1 cut(s) | 338 |
| BspACI | CCGC | 1 cut(s) | 7 |
| BspCNI | CTCAG | 1 cut(s) | 34 |
| BspMAI | CTGCAG | 1 cut(s) | 274 |
| BspMI | ACCTGC | 1 cut(s) | 266 |
| BstDEI | CTNAG | 1 cut(s) | 21 |
| BstF5I | GGATG | 1 cut(s) | 187 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 44 |
| BstNSI | RCATGY | 1 cut(s) | 38 |
| BstSCI | CCNGG | 2 cut(s) | 129, 209 |
| BstSFI | CTRYAG | 1 cut(s) | 270 |
| BstV1I | GCAGC | 3 cut(s) | 110, 269, 284 |
| BtgZI | GCGATG | 1 cut(s) | 209 |
| BtsCI | GGATG | 1 cut(s) | 187 |
| BtsI | GCAGTG | 1 cut(s) | 59 |
| BtsIMutI | CAGTG | 1 cut(s) | 59 |
| BveI | ACCTGC | 1 cut(s) | 266 |
| Csp6I | GTAC | 1 cut(s) | 279 |
| CviAII | CATG | 3 cut(s) | 35, 144, 314 |
| CviJI | RGCY | 5 cut(s) | 47, 101, 129, 260, 307 |
| CviKI_1 | RGCY | 5 cut(s) | 47, 101, 129, 260, 307 |
| CviQI | GTAC | 1 cut(s) | 279 |
| DdeI | CTNAG | 1 cut(s) | 21 |
| Eco88I | CYCGRG | 1 cut(s) | 338 |
| EcoRI | GAATTC | 1 cut(s) | 55 |
| FaeI | CATG | 3 cut(s) | 38, 147, 317 |
| FatI | CATG | 3 cut(s) | 34, 143, 313 |
| Fnu4HI | GCNGC | 3 cut(s) | 99, 258, 273 |
| FokI | GGATG | 1 cut(s) | 194 |
| Fsp4HI | GCNGC | 3 cut(s) | 99, 258, 273 |
| GluI | GCNGC | 3 cut(s) | 99, 258, 273 |
| GsaI | CCCAGC | 1 cut(s) | 165 |
| HapII | CCGG | 2 cut(s) | 131, 211 |
| Hin1II | CATG | 3 cut(s) | 38, 147, 317 |
| HindIII | AAGCTT | 1 cut(s) | 305 |
| HinfI | GANTC | 1 cut(s) | 336 |
| HpaII | CCGG | 2 cut(s) | 131, 211 |
| Hpy188I | TCNGA | 2 cut(s) | 172, 295 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 257, 272 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 44 |
| HpyF3I | CTNAG | 1 cut(s) | 21 |
| Hsp92II | CATG | 3 cut(s) | 38, 147, 317 |
| LpnPI | CCDG | 7 cut(s) | 8, 69, 144, 147, 224, 252, 261 |
| Lsp1109I | GCAGC | 3 cut(s) | 110, 269, 284 |
| MaeIII | GTNAC | 1 cut(s) | 77 |
| MboII | GAAGA | 1 cut(s) | 302 |
| MluCI | AATT | 2 cut(s) | 55, 199 |
| MlyI | GAGTC | 1 cut(s) | 330 |
| MnlI | CCTC | 1 cut(s) | 172 |
| MseI | TTAA | 2 cut(s) | 114, 234 |
| MslI | CAYNNNNRTG | 1 cut(s) | 252 |
| MspI | CCGG | 2 cut(s) | 131, 211 |
| MspR9I | CCNGG | 2 cut(s) | 131, 211 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 44 |
| NciI | CCSGG | 2 cut(s) | 131, 211 |
| NlaIII | CATG | 3 cut(s) | 38, 147, 317 |
| NspI | RCATGY | 1 cut(s) | 38 |
| PaeR7I | CTCGAG | 1 cut(s) | 338 |
| PkrI | GCNGC | 3 cut(s) | 100, 259, 274 |
| PleI | GAGTC | 1 cut(s) | 330 |
| PpsI | GAGTC | 1 cut(s) | 330 |
| PspFI | CCCAGC | 1 cut(s) | 161 |
| PspXI | VCTCGAGB | 1 cut(s) | 338 |
| PstI | CTGCAG | 1 cut(s) | 274 |
| RsaI | GTAC | 1 cut(s) | 280 |
| RsaNI | GTAC | 1 cut(s) | 279 |
| RseI | CAYNNNNRTG | 1 cut(s) | 252 |
| SaqAI | TTAA | 2 cut(s) | 114, 234 |
| SatI | GCNGC | 3 cut(s) | 99, 258, 273 |
| SchI | GAGTC | 1 cut(s) | 330 |
| ScrFI | CCNGG | 2 cut(s) | 131, 211 |
| SetI | ASST | 5 cut(s) | 103, 262, 280, 288, 309 |
| SfcI | CTRYAG | 1 cut(s) | 270 |
| Sfr274I | CTCGAG | 1 cut(s) | 338 |
| SlaI | CTCGAG | 1 cut(s) | 338 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 252 |
| SmlI | CTYRAG | 1 cut(s) | 338 |
| SmoI | CTYRAG | 1 cut(s) | 338 |
| Sse9I | AATT | 2 cut(s) | 55, 199 |
| SsiI | CCGC | 1 cut(s) | 7 |
| StyD4I | CCNGG | 2 cut(s) | 129, 209 |
| TaqI | TCGA | 1 cut(s) | 339 |
| TasI | AATT | 2 cut(s) | 55, 199 |
| Tru1I | TTAA | 2 cut(s) | 114, 234 |
| Tru9I | TTAA | 2 cut(s) | 114, 234 |
| TscAI | CASTG | 1 cut(s) | 66 |
| TseI | GCWGC | 3 cut(s) | 98, 257, 272 |
| TspDTI | ATGAA | 4 cut(s) | 132, 212, 258, 302 |
| TspRI | CASTG | 1 cut(s) | 66 |
| XapI | RAATTY | 2 cut(s) | 55, 199 |
| XceI | RCATGY | 1 cut(s) | 38 |
| XhoI | CTCGAG | 1 cut(s) | 338 |