Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002081.1

Orthogroup ID

OG0002972

Physical Location & Seq

Genomic Coordinates Reverse (-)

6511 .. 8616

Gene Structure 2106 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002081.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

atgccaccgttgtgtgaaccctctctggtagcggctttaatacaaaaatgcaccgccataaactcgctcagggaagcgcgtcgactccacgcgcttctcctaaccaccacaaccgtcgcctcgcgctcggtgttcctgtacaacaatgtgctatctatgtatgcacggtgcggctcgctcggagatgcacgcaaggtgttcgaagaaatgcctcaaagaagtcttgtttcgttcaatgcgctggctgcagcctattcccggagttcagacactgctggtttggcattaacattgctaaaacaaatgggagttgaatgtctcaggccaaatgtttcaactttcacgagtgtgatgcaagcgtcgtgtactcttgaggattggttggttggctctttggttcatgcacaagttgtgaaatgtgggttcttgaatgatgtgtatcttcagacagctctgcttgggatgtattccagctgtggggatttggtatctgctagcagagttttcggagaaatggttgatagagatgttgtggcttggaattcgatgattttcgggtatttgaagaatggtaagaacaaggaagggcttcatttggttgatggtatgttgaggactggagttattcctactcagttcacatattcagtggttttgagtgtgtgtagcagattgagatatttgaatctggggaaaatcatccatgcccgagtcatagtttcaagcacacaagctgatttggctttggagaattcactgcttgatatgtattgtaactctggtgacacccaagcagcttttagtgtgtttaataaaatggacagcccggatttggtttcatggaacacaatgattgctgggtattcagaaaatgaggatggggagaaggcgatgaatttgtttgcccagttgaaaagattgtgttatcttaaaccagatgaatatacatatgcagcaggtacataccttgcttctgactatggtaagcttcttcatggtcaagtcataaaagtaggactcgagaagagtatatttgtaggaactgcactagtgtctatgtacttcaagaacagcgaaacggatagtgctcaaaaggcattttattctatttctgagaaggatgttgttctctggactgagatgatcatgggttattcaagattggctaatggggagagtgcaattaagttcttcaaagaaatgtgcaaggaaagccataaggttgacagctttgctctgagtggagctttgagtgcttgttccgacctggccatgttaaaacaaggtgagatgattcacttgcaggccttaaaaacaggatttgatgttgaaatgtctgtgtgcgggagtctggtggatatgtatgcaaaaaacggttgccttgaatctgcttattgtatattttctcaagttgtggagcctgatttgaaatgtaggaactcgatgcttgggggatatagtcaacatggcatggcagaagaagcattgaagctcttttttgagatccaaaaacatggtctcgtaccagaccaagtaacatttctgtctctactctcagcttgcaaccacagtgggttggttgaagtaggaaagttcttgtggaattgtatgaaggagaatggtatcccacctgggcctaagcactgctcttgcatggttagtttgttaagtcgagctcgactactgaatgaggcagaggagcttattatcaagtcaccatttaatgaagataatcttgaactgtggagaactttgctgagctcgtgcgtcatcaataagaacttggagataggagttcatgcagcagagcaggttctaaaggttgatgcagaagacagtgcaacacatatcttgctttcaaatctctatgctgctgccggaaaatgggataaggttgtagaaataaggagaaagattaaagaactgacgttagagaaggatcctgggctgagctggattgaggataagaagaatattcaggtattcagttctggtgttcaatctaaggaagaggttggtgaagccgaagatgcactgcattggctacaaggaaacattgtacgatctcaaagagatgaacttgatgaacctatttataccacatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 PPR PPR_2

Protein Analysis

701

Amino Acids

77.52

Weight (kDa)

5.66

Isoelectric Point (pI)

40.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50420 AT3G50420
fragaria_vesca	FvH4_1g14840
malus_domestica	MD06G1092000.v1.1 MD15G1276000.v1.1
prunus_persica	Prupe.7G142000_v2.0.a1
pyrus_communis	pycom06g08800 pycom15g23890
rosa_chinensis	RchiOBHm_Chr1g0329891 RchiOBHm_Chr2g0103801
rosa_laevigata	RLG00000017261 RLG00000017264 RLG00000029855 RLG00000029861
rosa_multiflora	Rmu_sc0000112.1_g000010 Rmu_sc0000112.1_g000024 Rmu_sc0000112.1_g000025 Rmu_sc0002081.1_g000002 Rmu_sc0002081.1_g000010 Rmu_sc0006774.1_g000014
rosa_roxburghii	Rroxscaffold_2G00139300 Rroxscaffold_2G00139350 Rroxscaffold_4G00320530
rosa_rugosa	Rorug01G0084100 Rorug02G0117300
rosa_samantha	Rh1AG102000 Rh1BG081200 Rh1CG097500 Rh1DG105100 Rh2AG166400 Rh2BG173600 Rh2CG172300 Rh2DG171800
rosa_wichuraiana	Rw0G002030 Rw0G006910 Rw1G008070 Rw1G008120 Rw2G013030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	947, 1801
AccI	GTMKAC	1 cut(s)	82
AccII	CGCG	3 cut(s)	79, 92, 124
AciI	CCGC	4 cut(s)	32, 54, 171, 1344
AclWI	GGATC	3 cut(s)	1498, 1934, 1947
AcoI	YGGCCR	1 cut(s)	1269
AcsI	RAATTY	3 cut(s)	541, 751, 895
AcuI	CTGAAG	1 cut(s)	428
AfaI	GTAC	6 cut(s)	140, 367, 961, 1061, 1524, 2061
AfiI	CCNNNNNNNGG	4 cut(s)	258, 477, 832, 1884
AhlI	ACTAGT	1 cut(s)	1048
AjnI	CCWGG	3 cut(s)	1266, 1630, 1942
AjuI	GAANNNNNNNTTGG	2 cut(s)	1524, 1556
AleI	CACNNNNGTG	2 cut(s)	10, 347
Alw21I	GWGCWC	3 cut(s)	1090, 1678, 1763
Alw26I	GTCTC	3 cut(s)	323, 1523, 1551
AlwI	GGATC	3 cut(s)	1498, 1934, 1947
AlwNI	CAGNNNCTG	1 cut(s)	272
Ama87I	CYCGRG	2 cut(s)	708, 1019
AoxI	GGCC	4 cut(s)	323, 1269, 1305, 1634
ApeKI	GCWGC	7 cut(s)	245, 248, 794, 953, 1802, 1871, 1874
ApoI	RAATTY	3 cut(s)	541, 751, 895
ArsI	GACNNNNNNTTYG	2 cut(s)	1501, 1533
Asp700I	GAANNNNTTC	1 cut(s)	588
AspLEI	GCGC	4 cut(s)	79, 94, 126, 241
AspS9I	GGNCC	1 cut(s)	1634
AsuC2I	CCSGG	2 cut(s)	259, 827
AsuHPI	GGTGA	4 cut(s)	794, 1298, 1707, 2030
AsuII	TTCGAA	1 cut(s)	201
AsuNHI	GCTAGC	1 cut(s)	494
AvaI	CYCGRG	2 cut(s)	708, 1019
BalI	TGGCCA	1 cut(s)	1271
BamHI	GGATCC	1 cut(s)	1939
BanII	GRGCYC	2 cut(s)	1678, 1763
BauI	CACGAG	2 cut(s)	343, 1762
BbsI	GAAGAC	1 cut(s)	1839
Bbv12I	GWGCWC	3 cut(s)	1090, 1678, 1763
BbvI	GCAGC	7 cut(s)	232, 260, 806, 965, 1814, 1858, 1861
BccI	CCATC	2 cut(s)	596, 872
BcgI	CGANNNNNNTGC	6 cut(s)	181, 215, 334, 368, 487, 521
BciT130I	CCWGG	3 cut(s)	1268, 1632, 1944
BciVI	GTATCC	1 cut(s)	1634
BclI	TGATCA	1 cut(s)	1143
BcnI	CCSGG	2 cut(s)	259, 827
BcoDI	GTCTC	3 cut(s)	323, 1523, 1551
BcuI	ACTAGT	1 cut(s)	1048
BfaI	CTAG	2 cut(s)	495, 1049
BfmI	CTRYAG	1 cut(s)	246
BfuAI	ACCTGC	2 cut(s)	947, 1801
BfuI	GTATCC	1 cut(s)	1634
BisI	GCNGC	9 cut(s)	33, 172, 246, 249, 795, 954, 1803, 1872, 1875
BlpI	GCTNAGC	2 cut(s)	1757, 1949
BlsI	GCNGC	9 cut(s)	34, 173, 247, 250, 796, 955, 1804, 1873, 1876
Bme1390I	CCNGG	5 cut(s)	259, 827, 1268, 1632, 1944
BmeT110I	CYCGRG	2 cut(s)	708, 1019
BmgT120I	GGNCC	1 cut(s)	1634
BmiI	GGNNCC	2 cut(s)	1419, 1941
BmrFI	CCNGG	5 cut(s)	259, 827, 1268, 1632, 1944
BmrI	ACTGGG	1 cut(s)	901
BmsI	GCATC	5 cut(s)	175, 342, 1434, 1816, 2020
BmtI	GCTAGC	1 cut(s)	498
BmuI	ACTGGG	1 cut(s)	901
BpiI	GAAGAC	1 cut(s)	1839
BpmI	CTGGAG	1 cut(s)	639
Bpu10I	CCTNAGC	2 cut(s)	68, 1638
Bpu1102I	GCTNAGC	2 cut(s)	1757, 1949
Bpu14I	TTCGAA	1 cut(s)	201
BpuEI	CTTGAG	2 cut(s)	392, 1392
BpuMI	CCSGG	2 cut(s)	259, 827
BsaBI	GATNNNNATC	1 cut(s)	438
BsaI	GGTCTC	1 cut(s)	1523
BsaJI	CCNNGG	2 cut(s)	1631, 1943
BsaXI	ACNNNNNCTCC	2 cut(s)	501, 531
Bsc4I	CCNNNNNNNGG	4 cut(s)	258, 477, 832, 1884
Bse1I	ACTGG	2 cut(s)	622, 907
Bse3DI	GCAATG	1 cut(s)	290
Bse8I	GATNNNNATC	1 cut(s)	438
BseBI	CCWGG	3 cut(s)	1268, 1632, 1944
BseDI	CCNNGG	2 cut(s)	1631, 1943
BseGI	GGATG	4 cut(s)	468, 699, 883, 1126
BseJI	GATNNNNATC	1 cut(s)	438
BseLI	CCNNNNNNNGG	4 cut(s)	258, 477, 832, 1884
BseMI	GCAATG	1 cut(s)	290
BseMII	CTCAG	9 cut(s)	82, 334, 647, 1104, 1128, 1229, 1569, 1748, 1940
BseNI	ACTGG	2 cut(s)	622, 907
BseRI	GAGGAG	1 cut(s)	1712
BseXI	GCAGC	7 cut(s)	232, 260, 806, 965, 1814, 1858, 1861
BseYI	CCCAGC	1 cut(s)	857
BsgI	GTGCAG	1 cut(s)	1029
Bsh1236I	CGCG	3 cut(s)	79, 92, 124
BshFI	GGCC	4 cut(s)	325, 1271, 1307, 1636
BsiHKAI	GWGCWC	3 cut(s)	1090, 1678, 1763
BsiHKCI	CYCGRG	2 cut(s)	708, 1019
BsiSI	CCGG	3 cut(s)	259, 827, 1878
BslI	CCNNNNNNNGG	4 cut(s)	258, 477, 832, 1884
BsmAI	GTCTC	3 cut(s)	323, 1523, 1551
BsnI	GGCC	4 cut(s)	325, 1271, 1307, 1636
Bso31I	GGTCTC	1 cut(s)	1523
BsoBI	CYCGRG	2 cut(s)	708, 1019
Bsp119I	TTCGAA	1 cut(s)	201
Bsp1286I	GDGCHC	3 cut(s)	1090, 1678, 1763
Bsp1407I	TGTACA	1 cut(s)	138
Bsp143I	GATC	4 cut(s)	1143, 1503, 1939, 2063
Bsp1720I	GCTNAGC	2 cut(s)	1757, 1949
BspACI	CCGC	4 cut(s)	32, 54, 171, 1344
BspANI	GGCC	4 cut(s)	325, 1271, 1307, 1636
BspCNI	CTCAG	9 cut(s)	81, 333, 646, 1105, 1129, 1230, 1568, 1749, 1941
BspFNI	CGCG	3 cut(s)	79, 92, 124
BspLI	GGNNCC	2 cut(s)	1419, 1941
BspMAI	CTGCAG	1 cut(s)	250
BspMI	ACCTGC	2 cut(s)	947, 1801
BspOI	GCTAGC	1 cut(s)	498
BspPI	GGATC	3 cut(s)	1498, 1934, 1947
BspT104I	TTCGAA	1 cut(s)	201
BspTNI	GGTCTC	1 cut(s)	1523
BsrDI	GCAATG	1 cut(s)	290
BsrGI	TGTACA	1 cut(s)	138
BsrI	ACTGG	2 cut(s)	622, 907
BssECI	CCNNGG	2 cut(s)	1631, 1943
BssMI	GATC	4 cut(s)	1143, 1503, 1939, 2063
BssSI	CACGAG	2 cut(s)	343, 1762
Bst2BI	CACGAG	2 cut(s)	343, 1762
Bst2UI	CCWGG	3 cut(s)	1268, 1632, 1944
Bst4CI	ACNGT	7 cut(s)	9, 115, 168, 1376, 1571, 1743, 1838
Bst6I	CTCTTC	2 cut(s)	1019, 2004
BstAUI	TGTACA	1 cut(s)	138
BstBI	TTCGAA	1 cut(s)	201
BstC8I	GCNNGC	7 cut(s)	176, 190, 243, 357, 496, 1305, 1561
BstF5I	GGATG	4 cut(s)	468, 699, 883, 1126
BstFNI	CGCG	3 cut(s)	79, 92, 124
BstHHI	GCGC	4 cut(s)	79, 94, 126, 241
BstKTI	GATC	4 cut(s)	1146, 1506, 1942, 2066
BstMAI	GTCTC	3 cut(s)	323, 1523, 1551
BstMBI	GATC	4 cut(s)	1143, 1503, 1939, 2063
BstMWI	GCNNNNNNNGC	8 cut(s)	245, 281, 740, 1094, 1212, 1253, 1481, 2030
BstNI	CCWGG	3 cut(s)	1268, 1632, 1944
BstSCI	CCNGG	5 cut(s)	257, 825, 1266, 1630, 1942
BstSFI	CTRYAG	1 cut(s)	246
BstUI	CGCG	3 cut(s)	79, 92, 124
BstV1I	GCAGC	7 cut(s)	232, 260, 806, 965, 1814, 1858, 1861
BstV2I	GAAGAC	1 cut(s)	1839
BstX2I	RGATCY	2 cut(s)	1503, 1939
BstXI	CCANNNNNNTGG	1 cut(s)	1514
BstYI	RGATCY	2 cut(s)	1503, 1939
BsuI	GTATCC	1 cut(s)	1634
BsuRI	GGCC	4 cut(s)	325, 1271, 1307, 1636
BtgZI	GCGATG	1 cut(s)	905
BtsCI	GGATG	4 cut(s)	468, 699, 883, 1126
BtsI	GCAGTG	4 cut(s)	270, 755, 1642, 2033
BtsIMutI	CAGTG	7 cut(s)	270, 654, 755, 1576, 1642, 1843, 2033
BveI	ACCTGC	2 cut(s)	947, 1801
Cac8I	GCNNGC	7 cut(s)	176, 190, 243, 357, 496, 1305, 1561
CaiI	CAGNNNCTG	1 cut(s)	272
CfoI	GCGC	4 cut(s)	79, 94, 126, 241
Cfr13I	GGNCC	1 cut(s)	1634
CseI	GACGC	3 cut(s)	68, 348, 1756
Csp6I	GTAC	6 cut(s)	139, 366, 960, 1060, 1523, 2060
CspCI	CAANNNNNGTGG	2 cut(s)	1552, 1587
CviQI	GTAC	6 cut(s)	139, 366, 960, 1060, 1523, 2060
DpnI	GATC	4 cut(s)	1145, 1505, 1941, 2065
DpnII	GATC	4 cut(s)	1143, 1503, 1939, 2063
EaeI	YGGCCR	1 cut(s)	1269
Eam1104I	CTCTTC	2 cut(s)	1019, 2004
EarI	CTCTTC	2 cut(s)	1019, 2004
Ecl136II	GAGCTC	2 cut(s)	1676, 1761
Eco147I	AGGCCT	1 cut(s)	1307
Eco24I	GRGCYC	2 cut(s)	1678, 1763
Eco31I	GGTCTC	1 cut(s)	1523
Eco53kI	GAGCTC	2 cut(s)	1676, 1761
Eco57I	CTGAAG	1 cut(s)	428
Eco88I	CYCGRG	2 cut(s)	708, 1019
EcoICRI	GAGCTC	2 cut(s)	1676, 1761
EcoRI	GAATTC	2 cut(s)	541, 751
EcoRII	CCWGG	3 cut(s)	1266, 1630, 1942
EcoT38I	GRGCYC	2 cut(s)	1678, 1763
FalI	AAGNNNNNCTT	2 cut(s)	1719, 1751
FauI	CCCGC	1 cut(s)	1337
FauNDI	CATATG	1 cut(s)	949
FbaI	TGATCA	1 cut(s)	1143
FblI	GTMKAC	1 cut(s)	82
Fnu4HI	GCNGC	9 cut(s)	33, 172, 246, 249, 795, 954, 1803, 1872, 1875
FokI	GGATG	4 cut(s)	475, 686, 890, 1133
FriOI	GRGCYC	2 cut(s)	1678, 1763
Fsp4HI	GCNGC	9 cut(s)	33, 172, 246, 249, 795, 954, 1803, 1872, 1875
FspBI	CTAG	2 cut(s)	495, 1049
GlaI	GCGC	4 cut(s)	78, 93, 125, 240
GluI	GCNGC	9 cut(s)	33, 172, 246, 249, 795, 954, 1803, 1872, 1875
GsaI	CCCAGC	1 cut(s)	861
GsuI	CTGGAG	1 cut(s)	639
HaeIII	GGCC	4 cut(s)	325, 1271, 1307, 1636
HapII	CCGG	3 cut(s)	259, 827, 1878
HgaI	GACGC	3 cut(s)	68, 348, 1756
HhaI	GCGC	4 cut(s)	79, 94, 126, 241
Hin6I	GCGC	4 cut(s)	77, 92, 124, 239
HinP1I	GCGC	4 cut(s)	77, 92, 124, 239
HincII	GTYRAC	3 cut(s)	83, 1225, 1463
HindII	GTYRAC	3 cut(s)	83, 1225, 1463
HindIII	AAGCTT	1 cut(s)	986
HinfI	GANTC	7 cut(s)	84, 685, 711, 1017, 1294, 1348, 1385
HpaII	CCGG	3 cut(s)	259, 827, 1878
HphI	GGTGA	4 cut(s)	794, 1298, 1707, 2030
Hpy166II	GTNNAC	6 cut(s)	17, 83, 366, 639, 1225, 1463
Hpy188I	TCNGA	9 cut(s)	182, 268, 447, 509, 868, 976, 1114, 1239, 1264
Hpy188III	TCNNGA	8 cut(s)	343, 371, 427, 1021, 1066, 1132, 1158, 1736
Hpy8I	GTNNAC	6 cut(s)	17, 83, 366, 639, 1225, 1463
Hpy99I	CGWCG	3 cut(s)	84, 119, 364
HpyAV	CCTTC	5 cut(s)	578, 880, 1111, 1606, 1930
HpyCH4III	ACNGT	7 cut(s)	9, 115, 168, 1376, 1571, 1743, 1838
HpyCH4IV	ACGT	1 cut(s)	1928
HpyF10VI	GCNNNNNNNGC	8 cut(s)	245, 281, 740, 1094, 1212, 1253, 1481, 2030
HpySE526I	ACGT	1 cut(s)	1928
HspAI	GCGC	4 cut(s)	77, 92, 124, 239
Ksp22I	TGATCA	1 cut(s)	1143
Kzo9I	GATC	4 cut(s)	1143, 1503, 1939, 2063
LmnI	GCTCC	3 cut(s)	1244, 1417, 1699
Lsp1109I	GCAGC	7 cut(s)	232, 260, 806, 965, 1814, 1858, 1861
LweI	GCATC	5 cut(s)	175, 342, 1434, 1816, 2020
MaeI	CTAG	2 cut(s)	495, 1049
MaeII	ACGT	1 cut(s)	1928
MaeIII	GTNAC	4 cut(s)	773, 782, 1534, 1713
MalI	GATC	4 cut(s)	1145, 1505, 1941, 2065
MboI	GATC	4 cut(s)	1143, 1503, 1939, 2063
MflI	RGATCY	2 cut(s)	1503, 1939
MhlI	GDGCHC	3 cut(s)	1090, 1678, 1763
MlsI	TGGCCA	1 cut(s)	1271
MluCI	AATT	5 cut(s)	541, 751, 895, 1182, 1603
MluNI	TGGCCA	1 cut(s)	1271
MlyI	GAGTC	4 cut(s)	78, 720, 1011, 1357
MmeI	TCCRAC	1 cut(s)	1287
Mox20I	TGGCCA	1 cut(s)	1271
MroXI	GAANNNNTTC	1 cut(s)	588
MscI	TGGCCA	1 cut(s)	1271
MslI	CAYNNNNRTG	2 cut(s)	10, 347
Msp20I	TGGCCA	1 cut(s)	1271
MspA1I	CMGCKG	1 cut(s)	474
MspI	CCGG	3 cut(s)	259, 827, 1878
MspR9I	CCNGG	5 cut(s)	259, 827, 1268, 1632, 1944
MvaI	CCWGG	3 cut(s)	1268, 1632, 1944
MvnI	CGCG	3 cut(s)	79, 92, 124
MwoI	GCNNNNNNNGC	8 cut(s)	245, 281, 740, 1094, 1212, 1253, 1481, 2030
NciI	CCSGG	2 cut(s)	259, 827
NdeI	CATATG	1 cut(s)	949
NdeII	GATC	4 cut(s)	1143, 1503, 1939, 2063
NheI	GCTAGC	1 cut(s)	494
NlaIV	GGNNCC	2 cut(s)	1419, 1941
NmuCI	GTSAC	2 cut(s)	782, 1713
NspV	TTCGAA	1 cut(s)	201
OliI	CACNNNNGTG	2 cut(s)	10, 347
PaeR7I	CTCGAG	1 cut(s)	1019
PceI	AGGCCT	1 cut(s)	1307
PdmI	GAANNNNTTC	1 cut(s)	588
PfeI	GAWTC	3 cut(s)	685, 1294, 1385
PfoI	TCCNGGA	1 cut(s)	257
PkrI	GCNGC	9 cut(s)	34, 173, 247, 250, 796, 955, 1804, 1873, 1876
PleI	GAGTC	4 cut(s)	78, 719, 1011, 1356
PpsI	GAGTC	4 cut(s)	78, 719, 1011, 1356
Psp124BI	GAGCTC	2 cut(s)	1678, 1763
Psp6I	CCWGG	3 cut(s)	1266, 1630, 1942
PspFI	CCCAGC	1 cut(s)	857
PspGI	CCWGG	3 cut(s)	1266, 1630, 1942
PspN4I	GGNNCC	2 cut(s)	1419, 1941
PspPI	GGNCC	1 cut(s)	1634
PstI	CTGCAG	1 cut(s)	250
PstNI	CAGNNNCTG	1 cut(s)	272
PsuI	RGATCY	2 cut(s)	1503, 1939
PvuII	CAGCTG	1 cut(s)	474
RsaI	GTAC	6 cut(s)	140, 367, 961, 1061, 1524, 2061
RsaNI	GTAC	6 cut(s)	139, 366, 960, 1060, 1523, 2060
RseI	CAYNNNNRTG	2 cut(s)	10, 347
SacI	GAGCTC	2 cut(s)	1678, 1763
SalI	GTCGAC	1 cut(s)	81
SatI	GCNGC	9 cut(s)	33, 172, 246, 249, 795, 954, 1803, 1872, 1875
Sau3AI	GATC	4 cut(s)	1143, 1503, 1939, 2063
Sau96I	GGNCC	1 cut(s)	1634
SchI	GAGTC	4 cut(s)	78, 720, 1011, 1357
ScrFI	CCNGG	5 cut(s)	259, 827, 1268, 1632, 1944
SduI	GDGCHC	3 cut(s)	1090, 1678, 1763
SfaNI	GCATC	5 cut(s)	175, 342, 1434, 1816, 2020
SfcI	CTRYAG	1 cut(s)	246
Sfr274I	CTCGAG	1 cut(s)	1019
SfuI	TTCGAA	1 cut(s)	201
SlaI	CTCGAG	1 cut(s)	1019
SmiMI	CAYNNNNRTG	2 cut(s)	10, 347
SmlI	CTYRAG	3 cut(s)	371, 1019, 1407
SmoI	CTYRAG	3 cut(s)	371, 1019, 1407
SpeI	ACTAGT	1 cut(s)	1048
Sse9I	AATT	5 cut(s)	541, 751, 895, 1182, 1603
SseBI	AGGCCT	1 cut(s)	1307
SsiI	CCGC	4 cut(s)	32, 54, 171, 1344
SspI	AATATT	1 cut(s)	1975
SspMI	CTAG	2 cut(s)	495, 1049
SstI	GAGCTC	2 cut(s)	1678, 1763
StuI	AGGCCT	1 cut(s)	1307
StyD4I	CCNGG	5 cut(s)	257, 825, 1266, 1630, 1942
TaaI	ACNGT	7 cut(s)	9, 115, 168, 1376, 1571, 1743, 1838
TaiI	ACGT	1 cut(s)	1931
TaqI	TCGA	7 cut(s)	82, 201, 545, 1020, 1442, 1672, 1678
TasI	AATT	5 cut(s)	541, 751, 895, 1182, 1603
TatI	WGTACW	3 cut(s)	138, 365, 1059
TauI	GCSGC	2 cut(s)	35, 174
TfiI	GAWTC	3 cut(s)	685, 1294, 1385
TscAI	CASTG	7 cut(s)	277, 654, 762, 1576, 1649, 1843, 2040
TseFI	GTSAC	2 cut(s)	782, 1713
TseI	GCWGC	7 cut(s)	245, 248, 794, 953, 1802, 1871, 1874
Tsp45I	GTSAC	2 cut(s)	782, 1713
TspGWI	ACGGA	1 cut(s)	1094
TspRI	CASTG	7 cut(s)	277, 654, 762, 1576, 1649, 1843, 2040
XapI	RAATTY	3 cut(s)	541, 751, 895
XhoI	CTCGAG	1 cut(s)	1019
XmiI	GTMKAC	1 cut(s)	82
XmnI	GAANNNNTTC	1 cut(s)	588
XspI	CTAG	2 cut(s)	495, 1049

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.