Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0002972

Physical Location & Seq

Genomic Coordinates Reverse (-)

24232698 .. 24234818

Gene Structure 2121 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1276000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGCCACCGTCGTATGAGATAGCAGCTCTGATACAAAAATGCACCTCCGTAACCTCGCCGAAACAAGCGCGGCAGCTCCACGCTCTCCTCCTTACCACCACCACCACCGTCGGCTCGCGCTTTCCGTACCTGTACAACAATGTCATATCCATGTACTGGCGATGTGGATCGCTTGGGGACTCGCGGAAGGTGTTTGACAAAATGCCTCAACGAAATTTGGTTTCATTCAATGCGCTCATTGCGGCCTATTCCCGGGACTCAAACAGTGCGATTTTGGCTTGGGAGCTATTTAACGAAATGGGAGTTGAATGTCTTAGGCCAAATGGTTCGACTTTCACGAGCTTACTGCAGGCGTCATATACTCTTGAGGATTGGTTGATTGGCTCCTTGATTCATGCCCAAATTCTGAAGTTTGGGTTCTTGAGTGATGTTTGTCTTCAAACTGCTTTACTTGGGATGTACTCCAACTGTAGGGATTTGGAATCCGCGAGGAAAGTTTTTGGCGGGATGGTTGATAAAGATGTTGTTGCTTGGAATTCAATGATTTTTGGGAATTTGAAGAATGATGAGACAGCAGAAGGGCTTTCTCTCTTTGATGGCATGTTGAGGACTGGAATTGTTCCTACTCAATTCACATATTCAATGGTCTTGACTGCTTGCAGCAGATTAAGATATTTTTATCTGGGGAAACTCATCCATGCCCGAGTCATAGTTTCAAAAACGCTAGCTGACTTAGCTTTGCAGAATTCCTTGCTTGACATATATTGCAATTCTGGTGACACCCGAGTAGCATTTGGCGTGTTTAAGGGAATTTGTAACCCGGATTTGGTCTCTTGGAACACAATGATTTCTGGGTGTTCGGAACGTGGTGATGGTGAGAAGGCCATGAATTTATTTGTCCAGTTAAAGAAAACGCCGTTTCTTAAACCAGATGAGTATACTTTTGCAGCCATCATATCCGCAACAGGCACAGATCTAGTTTCCAACTATGGCAAGTCACTTCACGGACAGGTCACAAAAGCAGGATTTGAGAAGAGCATTTTTGTAGGAACTACACTAGTGTCTATGTATTTTCGAAATGCTGAATCAGATGATGCTCAGAAGGTGTTTTATTCCATCATAAAGAAAGATGTTGTTCTATGGACTGAGATGATCATGGGTTTTTCAAGATTGGCTGATGGGGAGAGTGCAATTAAGTTCTTCTATGAAATGTGCCAGGAAGGCCATAAGATTGACAGCTTTGCTCTCAGTGGAGTGTTGAGTGCTTGTTCCGACCTTGCCATGCTAAAACAAGGTGAGATGATTCACTCATGGGCTGTAAAAACCGGGCACGATGTTGAAATGTCAGTTTGCGGGAGTCTTGTAGATATGTATTCAAAAAATGGTAGCCTTGAAGCTGCTTATTCTATATTTTCCCAAGTTTCGGACCCCGATTTGAAATGCTGGAACTCAATGCTCGGAGGATATAGTCATCACGGCATGGCAGAGGAAGCATTGAAGCTGTTTTTCGAGATAGAAAAACATGGTCTGAGACCAGACCAAGTAACATTTCTGTCTCTACTCTCAGCTTGCAACCACAGTGGTTTGACTGAAGTAGGAAAGTTTTTGTGGAGATGTATGAAGGAAAACGGTATCACACCTGGGCCTAAGCACTACTCTTGCATGGTGAGTTTGTTAAGTCGAGCTCGGTTGTTGGATGAGGCAGAGGAGCTTATCATCAGTTCACCGTTTAATGAAAATCTTGAACTGTGGAGAACTTTGCTGAGCTCGTGCGTCGTCAATAAAAATTTGAAAATAGGAGTTCATGCAGCAGAGCAGGTTTTAAGTTTGGACTCAGAAGACAGTGCAACGCATATTTTGCTGTCAAATCTCTATGCTGCTGCAGGAAAATGGGATAGTGTTGTAGAAACAAGGAGAAAGATTAGAGTACTGACGTCGGAAAAGGATCCTGGACTAAGCTGGATTGAAGATAAGAGTAATATTCAGGTATTCTGTTCCGGCGTTGGATCAGAACAGGAGGCAGGTGAAGCCGAAGCTGCATTACATTCGTTACAAGGGAGCATGGTAAGATTACATACAGATGAATTTGATGAACCGATTTATAATTTACATGAAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 PPR PPR_2

Protein Analysis

707

Amino Acids

78.36

Weight (kDa)

5.65

Isoelectric Point (pI)

37.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	72 - 118	5.6e-07	PPR repeat family
PPR_2	PF13041	173 - 221	4e-10	PPR repeat family
PPR_2	PF13041	274 - 321	6.1e-10	PPR repeat family
PPR	PF01535	277 - 304	6.3e-06	PPR repeat
PPR_2	PF13041	376 - 424	7e-06	PPR repeat family
PPR_2	PF13041	477 - 524	8.1e-11	PPR repeat family
PPR	PF01535	481 - 510	1.7e-07	PPR repeat
E_motif	PF20431	596 - 656	6.5e-13	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50420 AT3G50420
fragaria_vesca	FvH4_1g14840
malus_domestica	MD06G1092000.v1.1 MD15G1276000.v1.1
prunus_persica	Prupe.7G142000_v2.0.a1
pyrus_communis	pycom06g08800 pycom15g23890
rosa_chinensis	RchiOBHm_Chr1g0329891 RchiOBHm_Chr2g0103801
rosa_laevigata	RLG00000017261 RLG00000017264 RLG00000029855 RLG00000029861
rosa_multiflora	Rmu_sc0000112.1_g000010 Rmu_sc0000112.1_g000024 Rmu_sc0000112.1_g000025 Rmu_sc0002081.1_g000002 Rmu_sc0002081.1_g000010 Rmu_sc0006774.1_g000014
rosa_roxburghii	Rroxscaffold_2G00139300 Rroxscaffold_2G00139350 Rroxscaffold_4G00320530
rosa_rugosa	Rorug01G0084100 Rorug02G0117300
rosa_samantha	Rh1AG102000 Rh1BG081200 Rh1CG097500 Rh1DG105100 Rh2AG166400 Rh2BG173600 Rh2CG172300 Rh2DG171800
rosa_wichuraiana	Rw0G002030 Rw0G006910 Rw1G008070 Rw1G008120 Rw2G013030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2103
AarI	CACCTGC	1 cut(s)	2012
AatII	GACGTC	1 cut(s)	1937
Acc36I	ACCTGC	2 cut(s)	1807, 2012
AccB7I	CCANNNNNTGG	1 cut(s)	156
AccI	GTMKAC	1 cut(s)	938
AccII	CGCG	4 cut(s)	70, 118, 184, 488
AciI	CCGC	7 cut(s)	70, 184, 242, 486, 504, 960, 1353
AclWI	GGATC	4 cut(s)	175, 1940, 1953, 2014
AcsI	RAATTY	9 cut(s)	214, 402, 535, 553, 745, 810, 889, 1786, 2084
AcuI	CTGAAG	2 cut(s)	428, 1611
AcyI	GRCGYC	2 cut(s)	353, 1934
AfaI	GTAC	5 cut(s)	128, 134, 155, 461, 1929
AfiI	CCNNNNNNNGG	5 cut(s)	156, 252, 471, 826, 1423
AhlI	ACTAGT	1 cut(s)	1057
AjnI	CCWGG	3 cut(s)	1215, 1639, 1948
AjuI	GAANNNNNNNTTGG	2 cut(s)	1533, 1565
Alw21I	GWGCWC	2 cut(s)	1687, 1769
Alw26I	GTCTC	4 cut(s)	563, 835, 1525, 1560
AlwI	GGATC	4 cut(s)	175, 1940, 1953, 2014
Ama87I	CYCGRG	3 cut(s)	252, 702, 783
AoxI	GGCC	5 cut(s)	243, 317, 882, 1222, 1643
ApeKI	GCWGC	9 cut(s)	23, 73, 660, 947, 1397, 1808, 1877, 1880, 2036
ApoI	RAATTY	9 cut(s)	214, 402, 535, 553, 745, 810, 889, 1786, 2084
AspLEI	GCGC	3 cut(s)	70, 120, 235
AspS9I	GGNCC	2 cut(s)	1426, 1643
AsuC2I	CCSGG	4 cut(s)	253, 254, 821, 1327
AsuHPI	GGTGA	7 cut(s)	788, 881, 887, 1307, 1678, 1716, 2036
AsuII	TTCGAA	1 cut(s)	1075
AsuNHI	GCTAGC	1 cut(s)	724
AvaI	CYCGRG	3 cut(s)	252, 702, 783
AvaII	GGWCC	1 cut(s)	1426
BaeGI	GKGCMC	1 cut(s)	1332
BamHI	GGATCC	1 cut(s)	1945
BanII	GRGCYC	2 cut(s)	1687, 1769
BarI	GAAGNNNNNNTAC	2 cut(s)	2025, 2057
BauI	CACGAG	2 cut(s)	337, 1768
BbsI	GAAGAC	2 cut(s)	428, 1845
Bbv12I	GWGCWC	2 cut(s)	1687, 1769
BbvI	GCAGC	9 cut(s)	35, 85, 672, 959, 1384, 1820, 1864, 1867, 2023
BccI	CCATC	6 cut(s)	502, 590, 866, 959, 1124, 1172
BceAI	ACGGC	2 cut(s)	901, 1492
BcgI	CGANNNNNNTGC	4 cut(s)	328, 362, 2028, 2062
BciT130I	CCWGG	3 cut(s)	1217, 1641, 1950
BclI	TGATCA	1 cut(s)	1152
BcnI	CCSGG	4 cut(s)	253, 254, 821, 1327
BcoDI	GTCTC	4 cut(s)	563, 835, 1525, 1560
BcuI	ACTAGT	1 cut(s)	1057
BfaI	CTAG	3 cut(s)	725, 977, 1058
BfmI	CTRYAG	3 cut(s)	347, 469, 1881
BfuAI	ACCTGC	2 cut(s)	1807, 2012
BglI	GCCNNNNNGGC	1 cut(s)	1221
BglII	AGATCT	1 cut(s)	973
BlpI	GCTNAGC	1 cut(s)	1763
BmcAI	AGTACT	1 cut(s)	1929
Bme1390I	CCNGG	7 cut(s)	253, 254, 821, 1217, 1327, 1641, 1950
Bme18I	GGWCC	1 cut(s)	1426
BmeT110I	CYCGRG	3 cut(s)	252, 702, 783
BmgT120I	GGNCC	2 cut(s)	1426, 1643
BmiI	GGNNCC	3 cut(s)	385, 1428, 1947
BmrFI	CCNGG	7 cut(s)	253, 254, 821, 1217, 1327, 1641, 1950
BmsI	GCATC	1 cut(s)	1084
BmtI	GCTAGC	1 cut(s)	728
BpiI	GAAGAC	2 cut(s)	428, 1845
Bpu10I	CCTNAGC	1 cut(s)	1647
Bpu1102I	GCTNAGC	1 cut(s)	1763
Bpu14I	TTCGAA	1 cut(s)	1075
BpuEI	CTTGAG	2 cut(s)	386, 442
BpuMI	CCSGG	4 cut(s)	253, 254, 821, 1327
BsaBI	GATNNNNATC	1 cut(s)	166
BsaHI	GRCGYC	2 cut(s)	353, 1934
BsaI	GGTCTC	2 cut(s)	835, 1525
BsaJI	CCNNGG	2 cut(s)	252, 1640
Bsc4I	CCNNNNNNNGG	5 cut(s)	156, 252, 471, 826, 1423
Bse1I	ACTGG	3 cut(s)	161, 616, 901
Bse3DI	GCAATG	1 cut(s)	237
Bse8I	GATNNNNATC	1 cut(s)	166
BseBI	CCWGG	3 cut(s)	1217, 1641, 1950
BseDI	CCNNGG	2 cut(s)	252, 1640
BseGI	GGATG	4 cut(s)	462, 513, 693, 1702
BseJI	GATNNNNATC	1 cut(s)	166
BseLI	CCNNNNNNNGG	5 cut(s)	156, 252, 471, 826, 1423
BseMI	GCAATG	1 cut(s)	237
BseMII	CTCAG	7 cut(s)	1112, 1137, 1261, 1520, 1578, 1754, 1848
BseNI	ACTGG	3 cut(s)	161, 616, 901
BseRI	GAGGAG	2 cut(s)	77, 1721
BseSI	GKGCMC	1 cut(s)	1332
BseXI	GCAGC	9 cut(s)	35, 85, 672, 959, 1384, 1820, 1864, 1867, 2023
Bsh1236I	CGCG	4 cut(s)	70, 118, 184, 488
BshFI	GGCC	5 cut(s)	245, 319, 884, 1224, 1645
BsiHKAI	GWGCWC	2 cut(s)	1687, 1769
BsiHKCI	CYCGRG	3 cut(s)	252, 702, 783
BsiSI	CCGG	4 cut(s)	253, 821, 1326, 1998
BslFI	GGGAC	2 cut(s)	191, 269
BslI	CCNNNNNNNGG	5 cut(s)	156, 252, 471, 826, 1423
BsmAI	GTCTC	4 cut(s)	563, 835, 1525, 1560
BsmFI	GGGAC	2 cut(s)	191, 269
BsnI	GGCC	5 cut(s)	245, 319, 884, 1224, 1645
Bso31I	GGTCTC	2 cut(s)	835, 1525
BsoBI	CYCGRG	3 cut(s)	252, 702, 783
Bsp119I	TTCGAA	1 cut(s)	1075
Bsp1286I	GDGCHC	3 cut(s)	1332, 1687, 1769
Bsp1407I	TGTACA	1 cut(s)	132
Bsp143I	GATC	5 cut(s)	167, 973, 1152, 1945, 2006
Bsp1720I	GCTNAGC	1 cut(s)	1763
BspACI	CCGC	7 cut(s)	70, 184, 242, 486, 504, 960, 1353
BspANI	GGCC	5 cut(s)	245, 319, 884, 1224, 1645
BspCNI	CTCAG	7 cut(s)	1111, 1138, 1260, 1521, 1577, 1755, 1847
BspFNI	CGCG	4 cut(s)	70, 118, 184, 488
BspLI	GGNNCC	3 cut(s)	385, 1428, 1947
BspMAI	CTGCAG	2 cut(s)	351, 1885
BspMI	ACCTGC	2 cut(s)	1807, 2012
BspOI	GCTAGC	1 cut(s)	728
BspPI	GGATC	4 cut(s)	175, 1940, 1953, 2014
BspQI	GCTCTTC	1 cut(s)	1028
BspT104I	TTCGAA	1 cut(s)	1075
BspTNI	GGTCTC	2 cut(s)	835, 1525
BsrDI	GCAATG	1 cut(s)	237
BsrGI	TGTACA	1 cut(s)	132
BsrI	ACTGG	3 cut(s)	161, 616, 901
BssECI	CCNNGG	2 cut(s)	252, 1640
BssMI	GATC	5 cut(s)	167, 973, 1152, 1945, 2006
BssNAI	GTATAC	1 cut(s)	939
BssNI	GRCGYC	2 cut(s)	353, 1934
BssSI	CACGAG	2 cut(s)	337, 1768
Bst1107I	GTATAC	1 cut(s)	939
Bst2BI	CACGAG	2 cut(s)	337, 1768
Bst2UI	CCWGG	3 cut(s)	1217, 1641, 1950
Bst4CI	ACNGT	9 cut(s)	9, 109, 266, 470, 1580, 1631, 1728, 1749, 1844
Bst6I	CTCTTC	1 cut(s)	1028
BstACI	GRCGYC	2 cut(s)	353, 1934
BstAPI	GCANNNNNTGC	1 cut(s)	1858
BstAUI	TGTACA	1 cut(s)	132
BstBI	TTCGAA	1 cut(s)	1075
BstC8I	GCNNGC	5 cut(s)	116, 351, 658, 726, 1570
BstF5I	GGATG	4 cut(s)	462, 513, 693, 1702
BstFNI	CGCG	4 cut(s)	70, 118, 184, 488
BstHHI	GCGC	3 cut(s)	70, 120, 235
BstKTI	GATC	5 cut(s)	170, 976, 1155, 1948, 2009
BstMAI	GTCTC	4 cut(s)	563, 835, 1525, 1560
BstMBI	GATC	5 cut(s)	167, 973, 1152, 1945, 2006
BstMWI	GCNNNNNNNGC	8 cut(s)	239, 275, 734, 1221, 1490, 1858, 2027, 2036
BstNI	CCWGG	3 cut(s)	1217, 1641, 1950
BstNSI	RCATGY	1 cut(s)	604
BstSCI	CCNGG	7 cut(s)	251, 252, 819, 1215, 1325, 1639, 1948
BstSFI	CTRYAG	3 cut(s)	347, 469, 1881
BstSLI	GKGCMC	1 cut(s)	1332
BstUI	CGCG	4 cut(s)	70, 118, 184, 488
BstV1I	GCAGC	9 cut(s)	35, 85, 672, 959, 1384, 1820, 1864, 1867, 2023
BstV2I	GAAGAC	2 cut(s)	428, 1845
BstX2I	RGATCY	2 cut(s)	973, 1945
BstYI	RGATCY	2 cut(s)	973, 1945
BstZ17I	GTATAC	1 cut(s)	939
BsuRI	GGCC	5 cut(s)	245, 319, 884, 1224, 1645
BtgZI	GCGATG	1 cut(s)	175
BtsCI	GGATG	4 cut(s)	462, 513, 693, 1702
BtsIMutI	CAGTG	4 cut(s)	271, 1255, 1585, 1849
BveI	ACCTGC	2 cut(s)	1807, 2012
Cac8I	GCNNGC	5 cut(s)	116, 351, 658, 726, 1570
CfoI	GCGC	3 cut(s)	70, 120, 235
Cfr13I	GGNCC	2 cut(s)	1426, 1643
Cfr9I	CCCGGG	1 cut(s)	252
CseI	GACGC	2 cut(s)	342, 1762
Csp6I	GTAC	5 cut(s)	127, 133, 154, 460, 1928
CspCI	CAANNNNNGTGG	2 cut(s)	1561, 1596
CviQI	GTAC	5 cut(s)	127, 133, 154, 460, 1928
DpnI	GATC	5 cut(s)	169, 975, 1154, 1947, 2008
DpnII	GATC	5 cut(s)	167, 973, 1152, 1945, 2006
Eam1104I	CTCTTC	1 cut(s)	1028
EarI	CTCTTC	1 cut(s)	1028
Ecl136II	GAGCTC	2 cut(s)	1685, 1767
Eco24I	GRGCYC	2 cut(s)	1687, 1769
Eco31I	GGTCTC	2 cut(s)	835, 1525
Eco47I	GGWCC	1 cut(s)	1426
Eco53kI	GAGCTC	2 cut(s)	1685, 1767
Eco57I	CTGAAG	2 cut(s)	428, 1611
Eco88I	CYCGRG	3 cut(s)	252, 702, 783
EcoICRI	GAGCTC	2 cut(s)	1685, 1767
EcoRI	GAATTC	2 cut(s)	535, 745
EcoRII	CCWGG	3 cut(s)	1215, 1639, 1948
EcoT38I	GRGCYC	2 cut(s)	1687, 1769
FaqI	GGGAC	2 cut(s)	191, 269
FauI	CCCGC	2 cut(s)	497, 1346
FbaI	TGATCA	1 cut(s)	1152
FblI	GTMKAC	1 cut(s)	938
FokI	GGATG	4 cut(s)	469, 520, 680, 1709
FriOI	GRGCYC	2 cut(s)	1687, 1769
FspBI	CTAG	3 cut(s)	725, 977, 1058
GlaI	GCGC	3 cut(s)	69, 119, 234
HaeIII	GGCC	5 cut(s)	245, 319, 884, 1224, 1645
HapII	CCGG	4 cut(s)	253, 821, 1326, 1998
HgaI	GACGC	2 cut(s)	342, 1762
HhaI	GCGC	3 cut(s)	70, 120, 235
Hin1I	GRCGYC	2 cut(s)	353, 1934
Hin6I	GCGC	3 cut(s)	68, 118, 233
HinP1I	GCGC	3 cut(s)	68, 118, 233
HinfI	GANTC	9 cut(s)	179, 257, 391, 482, 705, 1085, 1303, 1357, 1832
HpaII	CCGG	4 cut(s)	253, 821, 1326, 1998
HphI	GGTGA	7 cut(s)	788, 881, 887, 1307, 1678, 1716, 2036
Hpy166II	GTNNAC	2 cut(s)	939, 1724
Hpy188III	TCNNGA	7 cut(s)	337, 365, 421, 649, 1167, 1510, 1742
Hpy8I	GTNNAC	2 cut(s)	939, 1724
Hpy99I	CGWCG	4 cut(s)	13, 113, 1778, 1939
HpyAV	CCTTC	6 cut(s)	181, 572, 874, 1096, 1214, 1615
HpyCH4III	ACNGT	9 cut(s)	9, 109, 266, 470, 1580, 1631, 1728, 1749, 1844
HpyCH4IV	ACGT	2 cut(s)	865, 1934
HpyF10VI	GCNNNNNNNGC	8 cut(s)	239, 275, 734, 1221, 1490, 1858, 2027, 2036
HpySE526I	ACGT	2 cut(s)	865, 1934
Hsp92I	GRCGYC	2 cut(s)	353, 1934
HspAI	GCGC	3 cut(s)	68, 118, 233
Ksp22I	TGATCA	1 cut(s)	1152
Kzo9I	GATC	5 cut(s)	167, 973, 1152, 1945, 2006
LguI	GCTCTTC	1 cut(s)	1028
LmnI	GCTCC	5 cut(s)	81, 283, 389, 1708, 2058
Lsp1109I	GCAGC	9 cut(s)	35, 85, 672, 959, 1384, 1820, 1864, 1867, 2023
LweI	GCATC	1 cut(s)	1084
MaeI	CTAG	3 cut(s)	725, 977, 1058
MaeII	ACGT	2 cut(s)	865, 1934
MaeIII	GTNAC	7 cut(s)	49, 776, 815, 996, 1012, 1543, 2049
MalI	GATC	5 cut(s)	169, 975, 1154, 1947, 2008
MboI	GATC	5 cut(s)	167, 973, 1152, 1945, 2006
MboII	GAAGA	6 cut(s)	428, 571, 1045, 1192, 1850, 1979
MflI	RGATCY	2 cut(s)	973, 1945
MhlI	GDGCHC	3 cut(s)	1332, 1687, 1769
MlyI	GAGTC	5 cut(s)	173, 251, 714, 1366, 1826
MmeI	TCCRAC	6 cut(s)	489, 1008, 1296, 1674, 1917, 1984
MseI	TTAA	9 cut(s)	291, 668, 804, 905, 924, 1194, 1676, 1731, 1823
MslI	CAYNNNNRTG	2 cut(s)	149, 2079
MspI	CCGG	4 cut(s)	253, 821, 1326, 1998
MspR9I	CCNGG	7 cut(s)	253, 254, 821, 1217, 1327, 1641, 1950
MvaI	CCWGG	3 cut(s)	1217, 1641, 1950
MvnI	CGCG	4 cut(s)	70, 118, 184, 488
MwoI	GCNNNNNNNGC	8 cut(s)	239, 275, 734, 1221, 1490, 1858, 2027, 2036
NciI	CCSGG	4 cut(s)	253, 254, 821, 1327
NdeII	GATC	5 cut(s)	167, 973, 1152, 1945, 2006
NheI	GCTAGC	1 cut(s)	724
NlaIV	GGNNCC	3 cut(s)	385, 1428, 1947
NmuCI	GTSAC	3 cut(s)	776, 996, 1012
NspI	RCATGY	1 cut(s)	604
NspV	TTCGAA	1 cut(s)	1075
PaqCI	CACCTGC	1 cut(s)	2012
PciSI	GCTCTTC	1 cut(s)	1028
PcsI	WCGNNNNNNNCGW	2 cut(s)	122, 335
PfeI	GAWTC	4 cut(s)	391, 482, 1085, 1303
PflMI	CCANNNNNTGG	1 cut(s)	156
PfoI	TCCNGGA	1 cut(s)	1948
PleI	GAGTC	5 cut(s)	173, 251, 713, 1365, 1826
PpsI	GAGTC	5 cut(s)	173, 251, 713, 1365, 1826
PsiI	TTATAA	1 cut(s)	2103
Psp124BI	GAGCTC	2 cut(s)	1687, 1769
Psp6I	CCWGG	3 cut(s)	1215, 1639, 1948
PspGI	CCWGG	3 cut(s)	1215, 1639, 1948
PspN4I	GGNNCC	3 cut(s)	385, 1428, 1947
PspPI	GGNCC	2 cut(s)	1426, 1643
PstI	CTGCAG	2 cut(s)	351, 1885
PsuI	RGATCY	2 cut(s)	973, 1945
RsaI	GTAC	5 cut(s)	128, 134, 155, 461, 1929
RsaNI	GTAC	5 cut(s)	127, 133, 154, 460, 1928
RseI	CAYNNNNRTG	2 cut(s)	149, 2079
SacI	GAGCTC	2 cut(s)	1687, 1769
SapI	GCTCTTC	1 cut(s)	1028
SaqAI	TTAA	9 cut(s)	291, 668, 804, 905, 924, 1194, 1676, 1731, 1823
Sau3AI	GATC	5 cut(s)	167, 973, 1152, 1945, 2006
Sau96I	GGNCC	2 cut(s)	1426, 1643
ScaI	AGTACT	1 cut(s)	1929
SchI	GAGTC	5 cut(s)	173, 251, 714, 1366, 1826
ScrFI	CCNGG	7 cut(s)	253, 254, 821, 1217, 1327, 1641, 1950
SduI	GDGCHC	3 cut(s)	1332, 1687, 1769
SfaNI	GCATC	1 cut(s)	1084
SfcI	CTRYAG	3 cut(s)	347, 469, 1881
SfuI	TTCGAA	1 cut(s)	1075
SinI	GGWCC	1 cut(s)	1426
SmaI	CCCGGG	1 cut(s)	254
SmiMI	CAYNNNNRTG	2 cut(s)	149, 2079
SmlI	CTYRAG	2 cut(s)	365, 421
SmoI	CTYRAG	2 cut(s)	365, 421
SpeI	ACTAGT	1 cut(s)	1057
SsiI	CCGC	7 cut(s)	70, 184, 242, 486, 504, 960, 1353
SspI	AATATT	1 cut(s)	1981
SspMI	CTAG	3 cut(s)	725, 977, 1058
SstI	GAGCTC	2 cut(s)	1687, 1769
StyD4I	CCNGG	7 cut(s)	251, 252, 819, 1215, 1325, 1639, 1948
TaaI	ACNGT	9 cut(s)	9, 109, 266, 470, 1580, 1631, 1728, 1749, 1844
TaiI	ACGT	2 cut(s)	868, 1937
TaqI	TCGA	4 cut(s)	329, 1075, 1509, 1681
TatI	WGTACW	4 cut(s)	132, 153, 459, 1927
TauI	GCSGC	2 cut(s)	73, 245
TfiI	GAWTC	4 cut(s)	391, 482, 1085, 1303
Tru1I	TTAA	9 cut(s)	291, 668, 804, 905, 924, 1194, 1676, 1731, 1823
Tru9I	TTAA	9 cut(s)	291, 668, 804, 905, 924, 1194, 1676, 1731, 1823
TscAI	CASTG	4 cut(s)	271, 1255, 1585, 1849
TseFI	GTSAC	3 cut(s)	776, 996, 1012
TseI	GCWGC	9 cut(s)	23, 73, 660, 947, 1397, 1808, 1877, 1880, 2036
Tsp45I	GTSAC	3 cut(s)	776, 996, 1012
TspDTI	ATGAA	9 cut(s)	213, 383, 902, 1221, 1634, 1749, 1793, 2097, 2106
TspGWI	ACGGA	3 cut(s)	37, 114, 1020
TspMI	CCCGGG	1 cut(s)	252
TspRI	CASTG	4 cut(s)	271, 1255, 1585, 1849
Van91I	CCANNNNNTGG	1 cut(s)	156
VpaK11BI	GGWCC	1 cut(s)	1426
XapI	RAATTY	9 cut(s)	214, 402, 535, 553, 745, 810, 889, 1786, 2084
XceI	RCATGY	1 cut(s)	604
XmaI	CCCGGG	1 cut(s)	252
XmiI	GTMKAC	1 cut(s)	938
XspI	CTAG	3 cut(s)	725, 977, 1058
ZraI	GACGTC	1 cut(s)	1935
ZrmI	AGTACT	1 cut(s)	1929

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.