AT4G10310

Transporter

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
6391854 .. 6395922
4069 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G10310.1

Sequence Viewer

Length: 1521 bp
ATGGACAGAGTGGTGGCAAAAATAGCAAAAATCCGTTCGCAGCTTACTAAATTACGTTCACTATTCTTCCTTTACTTCATCTACTTCTTGTTCTTCTCCTTTTTAGGGTTTTTGGCACTCAAGATCACAAAGCCAAGAACCACTTCACGTCCTCATGACTTTGACCTTTTCTTCACTTCTGTCTCTGCCATCACCGTCTCTTCCATGTCTACCGTCGACATGGAAGTCTTCTCCAACACCCAACTTATCTTCCTCACTATCCTCATGTTCCTCGGTGGCGAAATCTTCACCTCCTTTCTCAACCTCTACGTCTCCTATTTCACCAAGTTCGTCTTCCCTCATAACAAGATTAGACATATTTTGGGATCTTATAATTCGGACAGTTCCATCGAGGATCGCTGTGACGTTGAGACTGTTACTGATTATCGCGAGGGTCTTATCAAGATCGATGAAAGGGCATCTAAGTGCTTGTACTCGGTGGTTCTTAGTTACCATCTTGTTACTAACCTAGTTGGCTCTGTGTTGCTTCTTGTGTACGTAAATTTTGTTAAAACGGCGAGAGATGTTCTTAGTTCCAAAGAAATCTCACCTCTCACTTTCTCCGTCTTCACAACTGTTTCCACGTTTGCAAACTGCGGATTTGTCCCCACGAATGAGAACATGATCATCTTTCGCAAGAACTCTGGTCTCATCTGGCTCCTAATCCCTCAAGTACTGATGGGAAACACTTTGTTCCCTTGCTTCTTGGTTTTGCTCATATGGGGACTTTATAAGATCACAAAGCGTGACGAGTATGGTTACATTCTCAAGAACCACAATAAGATGGGATACTCTCATCTACTCTCGGTTCGTCTATGTGTTCTTCTTGGAGTGACGGTGCTAGGGTTTCTGATAATACAGCTTCTTTTCTTCTGCGCCTTTGAATGGACCTCTGAGTCTCTAGAAGGAATGAGTTCGTACGAGAAGTTGGTTGGATCGTTGTTTCAAGTGGTGAATTCGCGACACACCGGAGAAACTATAGTAGACCTCTCTACACTTTCCCCAGCTATCTTGGTACTCTTTATTCTTATGATGTATCTTCCTCCATACACTTTATTTATGCCGTTGACGGAACAAAAGACGATAGAGAAAGAAGGAGGAGATGATGATTCCGAAAATGGAAAGAAAGTTAAAAAGAGTGGACTCATCGTGTCACAACTTTCCTTTTTGACGATATGTATCTTTCTCATTTCAATCACCGAAAGGCAAAATCTACAACGTGATCCGATAAATTTCAACGTCCTTAACATCACTCTCGAAGTTATCAGTGCATATGGAAACGTTGGTTTCACTACCGGGTACAGCTGTGAACGGCGTGTGGACATCAGCGATGGTGGCTGCAAAGACGCGAGTTATGGGTTTGCAGGACGATGGAGTCCAATGGGAAAATTCGTACTAATAATAGTAATGTTTTATGGTAGGTTTAAGCAGTTCACAGCCAAATCTGGCCGCGCATGGATTCTTTACCCCTCGTCTTCCTAA

Protein Analysis

506

Amino Acids

57.45

Weight (kDa)

8.86

Isoelectric Point (pI)

34.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TrkH PF02386 148 - 492 1.1e-32 Cation transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 372, 771
AasI GACNNNNNNGTC 3 cut(s) 224, 934, 1413
AccI GTMKAC 3 cut(s) 209, 216, 1023
AccII CGCG 4 cut(s) 429, 1000, 1388, 1491
AciI CCGC 2 cut(s) 636, 1489
AclI AACGTT 1 cut(s) 1320
AclWI GGATC 4 cut(s) 373, 402, 982, 1256
AcoI YGGCCR 1 cut(s) 1486
AcsI RAATTY 4 cut(s) 541, 994, 1270, 1427
AfaI GTAC 7 cut(s) 473, 536, 714, 959, 1056, 1340, 1434
AfiI CCNNNNNNNGG 2 cut(s) 105, 924
AgsI TTSAA 4 cut(s) 923, 986, 1233, 1276
AjiI CACGTC 1 cut(s) 149
AjuI GAANNNNNNNTTGG 4 cut(s) 127, 159, 317, 349
AluBI AGCT 4 cut(s) 43, 901, 1046, 1344
AluI AGCT 4 cut(s) 43, 901, 1046, 1344
Alw26I GTCTC 6 cut(s) 187, 202, 316, 404, 692, 942
AlwI GGATC 4 cut(s) 373, 402, 982, 1256
AoxI GGCC 1 cut(s) 1486
ApeKI GCWGC 2 cut(s) 40, 1377
ApoI RAATTY 4 cut(s) 541, 994, 1270, 1427
Asp700I GAANNNNTTC 2 cut(s) 142, 952
AspLEI GCGC 2 cut(s) 917, 1493
AspS9I GGNCC 1 cut(s) 927
AsuC2I CCSGG 1 cut(s) 1336
AsuHPI GGTGA 6 cut(s) 184, 280, 313, 579, 1003, 1228
AvaII GGWCC 1 cut(s) 927
BaeI ACNNNNGTAYC 2 cut(s) 1330, 1363
BbsI GAAGAC 4 cut(s) 220, 325, 598, 1506
BbvI GCAGC 2 cut(s) 52, 1364
BccI CCATC 7 cut(s) 197, 395, 501, 712, 817, 1364, 1404
BceAI ACGGC 3 cut(s) 570, 1087, 1367
BciVI GTATCC 1 cut(s) 821
BclI TGATCA 1 cut(s) 663
BcnI CCSGG 1 cut(s) 1336
BcoDI GTCTC 6 cut(s) 187, 202, 316, 404, 692, 942
BfaI CTAG 3 cut(s) 509, 881, 941
BfmI CTRYAG 1 cut(s) 1017
BfuI GTATCC 1 cut(s) 821
BisI GCNGC 3 cut(s) 41, 1378, 1489
BlsI GCNGC 3 cut(s) 42, 1379, 1490
BmcAI AGTACT 1 cut(s) 714
Bme1390I CCNGG 1 cut(s) 1336
Bme18I GGWCC 1 cut(s) 927
BmgBI CACGTC 1 cut(s) 149
BmgT120I GGNCC 1 cut(s) 927
BmiI GGNNCC 1 cut(s) 698
BmrFI CCNGG 1 cut(s) 1336
BmsI GCATC 1 cut(s) 467
BpiI GAAGAC 4 cut(s) 220, 325, 598, 1506
BpuEI CTTGAG 3 cut(s) 104, 693, 791
BpuMI CCSGG 1 cut(s) 1336
Bsa29I ATCGAT 1 cut(s) 447
BsaAI YACGTR 1 cut(s) 538
BsaBI GATNNNNATC 1 cut(s) 1217
BsaI GGTCTC 1 cut(s) 692
BsaJI CCNNGG 1 cut(s) 271
BsaWI WCCGGW 1 cut(s) 1007
BsaXI ACNNNNNCTCC 2 cut(s) 861, 891
Bsc4I CCNNNNNNNGG 2 cut(s) 105, 924
Bse8I GATNNNNATC 1 cut(s) 1217
BseCI ATCGAT 1 cut(s) 447
BseDI CCNNGG 1 cut(s) 271
BseJI GATNNNNATC 1 cut(s) 1217
BseLI CCNNNNNNNGG 2 cut(s) 105, 924
BseMII CTCAG 1 cut(s) 924
BseRI GAGGAG 1 cut(s) 1152
BseXI GCAGC 2 cut(s) 52, 1364
BseYI CCCAGC 1 cut(s) 1042
Bsh1236I CGCG 4 cut(s) 429, 1000, 1388, 1491
BshFI GGCC 1 cut(s) 1488
BshVI ATCGAT 1 cut(s) 447
BsiSI CCGG 2 cut(s) 1008, 1335
BsiWI CGTACG 1 cut(s) 957
BslFI GGGAC 2 cut(s) 629, 777
BslI CCNNNNNNNGG 2 cut(s) 105, 924
BsmAI GTCTC 6 cut(s) 187, 202, 316, 404, 692, 942
BsmBI CGTCTC 2 cut(s) 202, 316
BsmFI GGGAC 2 cut(s) 629, 777
BsnI GGCC 1 cut(s) 1488
Bso31I GGTCTC 1 cut(s) 692
Bsp143I GATC 8 cut(s) 123, 365, 394, 444, 663, 774, 974, 1261
Bsp68I TCGCGA 2 cut(s) 429, 1000
BspACI CCGC 2 cut(s) 636, 1489
BspANI GGCC 1 cut(s) 1488
BspCNI CTCAG 1 cut(s) 925
BspDI ATCGAT 1 cut(s) 447
BspFNI CGCG 4 cut(s) 429, 1000, 1388, 1491
BspHI TCATGA 1 cut(s) 154
BspLI GGNNCC 1 cut(s) 698
BspPI GGATC 4 cut(s) 373, 402, 982, 1256
BspTNI GGTCTC 1 cut(s) 692
BssECI CCNNGG 1 cut(s) 271
BssMI GATC 8 cut(s) 123, 365, 394, 444, 663, 774, 974, 1261
Bst4CI ACNGT 6 cut(s) 196, 214, 383, 415, 616, 877
Bst6I CTCTTC 1 cut(s) 205
BstBAI YACGTR 1 cut(s) 538
BstDEI CTNAG 4 cut(s) 462, 485, 569, 933
BstFNI CGCG 4 cut(s) 429, 1000, 1388, 1491
BstHHI GCGC 2 cut(s) 917, 1493
BstKTI GATC 8 cut(s) 126, 368, 397, 447, 666, 777, 977, 1264
BstMAI GTCTC 6 cut(s) 187, 202, 316, 404, 692, 942
BstMBI GATC 8 cut(s) 123, 365, 394, 444, 663, 774, 974, 1261
BstMWI GCNNNNNNNGC 2 cut(s) 23, 1374
BstSCI CCNGG 1 cut(s) 1334
BstSFI CTRYAG 1 cut(s) 1017
BstSNI TACGTA 1 cut(s) 538
BstUI CGCG 4 cut(s) 429, 1000, 1388, 1491
BstV1I GCAGC 2 cut(s) 52, 1364
BstV2I GAAGAC 4 cut(s) 220, 325, 598, 1506
BstX2I RGATCY 1 cut(s) 365
BstYI RGATCY 1 cut(s) 365
Bsu15I ATCGAT 1 cut(s) 447
BsuI GTATCC 1 cut(s) 821
BsuRI GGCC 1 cut(s) 1488
BsuTUI ATCGAT 1 cut(s) 447
BtgZI GCGATG 1 cut(s) 1383
BtrI CACGTC 1 cut(s) 149
BtsIMutI CAGTG 1 cut(s) 1312
BtuMI TCGCGA 2 cut(s) 429, 1000
CciI TCATGA 1 cut(s) 154
CfoI GCGC 2 cut(s) 917, 1493
Cfr13I GGNCC 1 cut(s) 927
ClaI ATCGAT 1 cut(s) 447
CseI GACGC 1 cut(s) 1394
Csp6I GTAC 7 cut(s) 472, 535, 713, 958, 1055, 1339, 1433
CviAII CATG 6 cut(s) 155, 205, 220, 265, 661, 1494
CviQI GTAC 7 cut(s) 472, 535, 713, 958, 1055, 1339, 1433
DdeI CTNAG 4 cut(s) 462, 485, 569, 933
DpnI GATC 8 cut(s) 125, 367, 396, 446, 665, 776, 976, 1263
DpnII GATC 8 cut(s) 123, 365, 394, 444, 663, 774, 974, 1261
DrdI GACNNNNNNGTC 3 cut(s) 224, 934, 1413
DseDI GACNNNNNNGTC 3 cut(s) 224, 934, 1413
EaeI YGGCCR 1 cut(s) 1486
Eam1104I CTCTTC 1 cut(s) 205
EarI CTCTTC 1 cut(s) 205
Eco105I TACGTA 1 cut(s) 538
Eco31I GGTCTC 1 cut(s) 692
Eco47I GGWCC 1 cut(s) 927
EcoRI GAATTC 1 cut(s) 994
Esp3I CGTCTC 2 cut(s) 202, 316
FaeI CATG 6 cut(s) 158, 208, 223, 268, 664, 1497
FalI AAGNNNNNCTT 4 cut(s) 127, 159, 317, 349
FaqI GGGAC 2 cut(s) 629, 777
FatI CATG 6 cut(s) 154, 204, 219, 264, 660, 1493
FauNDI CATATG 2 cut(s) 758, 1312
FbaI TGATCA 1 cut(s) 663
FblI GTMKAC 3 cut(s) 209, 216, 1023
Fnu4HI GCNGC 3 cut(s) 41, 1378, 1489
Fsp4HI GCNGC 3 cut(s) 41, 1378, 1489
FspBI CTAG 3 cut(s) 509, 881, 941
GlaI GCGC 2 cut(s) 916, 1492
GluI GCNGC 3 cut(s) 41, 1378, 1489
GsaI CCCAGC 1 cut(s) 1046
HaeIII GGCC 1 cut(s) 1488
HapII CCGG 2 cut(s) 1008, 1335
HgaI GACGC 1 cut(s) 1394
HhaI GCGC 2 cut(s) 917, 1493
Hin1II CATG 6 cut(s) 158, 208, 223, 268, 664, 1497
Hin6I GCGC 2 cut(s) 915, 1491
HinP1I GCGC 2 cut(s) 915, 1491
HincII GTYRAC 2 cut(s) 217, 1107
HindII GTYRAC 2 cut(s) 217, 1107
HinfI GANTC 5 cut(s) 935, 1148, 1182, 1414, 1498
HpaII CCGG 2 cut(s) 1008, 1335
HphI GGTGA 6 cut(s) 184, 280, 313, 579, 1003, 1228
Hpy188I TCNGA 5 cut(s) 379, 891, 934, 1153, 1266
Hpy188III TCNNGA 8 cut(s) 121, 155, 428, 442, 808, 941, 999, 1295
Hpy99I CGWCG 1 cut(s) 218
HpyAV CCTTC 2 cut(s) 938, 1127
HpyCH4III ACNGT 6 cut(s) 196, 214, 383, 415, 616, 877
HpyCH4IV ACGT 9 cut(s) 55, 148, 309, 405, 537, 623, 1258, 1278, 1320
HpyCH4V TGCA 4 cut(s) 629, 1310, 1380, 1403
HpyF10VI GCNNNNNNNGC 2 cut(s) 23, 1374
HpyF3I CTNAG 4 cut(s) 462, 485, 569, 933
HpySE526I ACGT 9 cut(s) 55, 148, 309, 405, 537, 623, 1258, 1278, 1320
Hsp92II CATG 6 cut(s) 158, 208, 223, 268, 664, 1497
HspAI GCGC 2 cut(s) 915, 1491
Ksp22I TGATCA 1 cut(s) 663
Kzo9I GATC 8 cut(s) 123, 365, 394, 444, 663, 774, 974, 1261
LmnI GCTCC 1 cut(s) 702
LpnPI CCDG 7 cut(s) 669, 679, 1021, 1056, 1348, 1389, 1470
Lsp1109I GCAGC 2 cut(s) 52, 1364
LweI GCATC 1 cut(s) 467
MaeI CTAG 3 cut(s) 509, 881, 941
MaeII ACGT 9 cut(s) 55, 148, 309, 405, 537, 623, 1258, 1278, 1320
MaeIII GTNAC 8 cut(s) 401, 415, 488, 499, 785, 797, 871, 1191
MalI GATC 8 cut(s) 125, 367, 396, 446, 665, 776, 976, 1263
MboI GATC 8 cut(s) 123, 365, 394, 444, 663, 774, 974, 1261
MflI RGATCY 1 cut(s) 365
MluCI AATT 6 cut(s) 50, 373, 541, 994, 1270, 1427
MlyI GAGTC 3 cut(s) 944, 1176, 1423
MmeI TCCRAC 2 cut(s) 258, 952
MroXI GAANNNNTTC 2 cut(s) 142, 952
MseI TTAA 4 cut(s) 549, 1170, 1284, 1464
MslI CAYNNNNRTG 1 cut(s) 463
MspA1I CMGCKG 1 cut(s) 1344
MspI CCGG 2 cut(s) 1008, 1335
MspR9I CCNGG 1 cut(s) 1336
MvnI CGCG 4 cut(s) 429, 1000, 1388, 1491
MwoI GCNNNNNNNGC 2 cut(s) 23, 1374
NciI CCSGG 1 cut(s) 1336
NdeI CATATG 2 cut(s) 758, 1312
NdeII GATC 8 cut(s) 123, 365, 394, 444, 663, 774, 974, 1261
NlaIII CATG 6 cut(s) 158, 208, 223, 268, 664, 1497
NlaIV GGNNCC 1 cut(s) 698
NmuCI GTSAC 4 cut(s) 401, 785, 871, 1191
NruI TCGCGA 2 cut(s) 429, 1000
PagI TCATGA 1 cut(s) 154
PdmI GAANNNNTTC 2 cut(s) 142, 952
PfeI GAWTC 2 cut(s) 1148, 1498
Pfl23II CGTACG 1 cut(s) 957
PkrI GCNGC 3 cut(s) 42, 1379, 1490
PleI GAGTC 3 cut(s) 943, 1176, 1422
PpsI GAGTC 3 cut(s) 943, 1176, 1422
Ppu21I YACGTR 1 cut(s) 538
PsiI TTATAA 2 cut(s) 372, 771
Psp1406I AACGTT 1 cut(s) 1320
PspFI CCCAGC 1 cut(s) 1042
PspLI CGTACG 1 cut(s) 957
PspN4I GGNNCC 1 cut(s) 698
PspPI GGNCC 1 cut(s) 927
PsuI RGATCY 1 cut(s) 365
PvuII CAGCTG 1 cut(s) 1344
RruI TCGCGA 2 cut(s) 429, 1000
RsaI GTAC 7 cut(s) 473, 536, 714, 959, 1056, 1340, 1434
RsaNI GTAC 7 cut(s) 472, 535, 713, 958, 1055, 1339, 1433
RseI CAYNNNNRTG 1 cut(s) 463
SalI GTCGAC 1 cut(s) 215
SaqAI TTAA 4 cut(s) 549, 1170, 1284, 1464
SatI GCNGC 3 cut(s) 41, 1378, 1489
Sau3AI GATC 8 cut(s) 123, 365, 394, 444, 663, 774, 974, 1261
Sau96I GGNCC 1 cut(s) 927
ScaI AGTACT 1 cut(s) 714
SchI GAGTC 3 cut(s) 944, 1176, 1423
ScrFI CCNGG 1 cut(s) 1336
SfaNI GCATC 1 cut(s) 467
SfcI CTRYAG 1 cut(s) 1017
SinI GGWCC 1 cut(s) 927
SmiMI CAYNNNNRTG 1 cut(s) 463
SmlI CTYRAG 3 cut(s) 119, 708, 806
SmoI CTYRAG 3 cut(s) 119, 708, 806
SnaBI TACGTA 1 cut(s) 538
Sse9I AATT 6 cut(s) 50, 373, 541, 994, 1270, 1427
SsiI CCGC 2 cut(s) 636, 1489
SspMI CTAG 3 cut(s) 509, 881, 941
StyD4I CCNGG 1 cut(s) 1334
TaaI ACNGT 6 cut(s) 196, 214, 383, 415, 616, 877
TaiI ACGT 9 cut(s) 58, 151, 312, 408, 540, 626, 1261, 1281, 1323
TaqI TCGA 4 cut(s) 216, 390, 447, 1296
TasI AATT 6 cut(s) 50, 373, 541, 994, 1270, 1427
TatI WGTACW 2 cut(s) 471, 712
TauI GCSGC 1 cut(s) 1491
TfiI GAWTC 2 cut(s) 1148, 1498
Tru1I TTAA 4 cut(s) 549, 1170, 1284, 1464
Tru9I TTAA 4 cut(s) 549, 1170, 1284, 1464
TscAI CASTG 1 cut(s) 1312
TseFI GTSAC 4 cut(s) 401, 785, 871, 1191
TseI GCWGC 2 cut(s) 40, 1377
Tsp45I GTSAC 4 cut(s) 401, 785, 871, 1191
TspDTI ATGAA 2 cut(s) 67, 465
TspGWI ACGGA 3 cut(s) 23, 592, 1124
TspRI CASTG 1 cut(s) 1312
VpaK11BI GGWCC 1 cut(s) 927
XapI RAATTY 4 cut(s) 541, 994, 1270, 1427
XbaI TCTAGA 1 cut(s) 940
XmiI GTMKAC 3 cut(s) 209, 216, 1023
XmnI GAANNNNTTC 2 cut(s) 142, 952
XspI CTAG 3 cut(s) 509, 881, 941
ZrmI AGTACT 1 cut(s) 714
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.