Prupe.1G066800_v2.0.a1

Cation transport protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
4764398 .. 4767348
2951 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G066800.1

Sequence Viewer

Length: 1665 bp
ATGAACAACTTAGTTTGTTTTGGCAAGAAATTGCAACATCTTTGTAGTTGTTCATTTCTCAAACTAGCCTGTCTTAGCAAACCCATGGGTTTTCTACTTGTATGTTATTATCGGTTCGTCCTCCGTAGGGCAAAGCCATTTTGGATCGAGCTAGTCTATTTTGTCACCCTCTCCTTTCTTGGTTTTTGGGTTCTCAAGGCTTTGAAGCCAAGAACCGATCCTTCTTTTCGGCCTAGGAATTTAGATTTGTTTTTCACCTCTGTCTCTGCCTCAACTGTTTCTAGCATGTCCACTGTTGAAATGGAGGTTTTCTCCAATGCCCAGCTCATCATTTTAACCATTTTGATGTTCATAGGTGGGGAGGTCTTTACCTCCATGGTTGGACTTCAGCTGTGGAAGCTCAAGCTCATGCTGCTAACAAAAGAAAAAGTTGCTTCAGCCAGCAGTGATATTAGTCCTTCATCAACACCCACAAATAATATTGTTTTTGATCATGTTGAATTGGGCTCATTGGCATCCAAGCCTGAATTCCAAGACTTAAATTTGGGTGTGGAGGTTTATGATCAGGACCAAATTGATAAACCATTAGATGGTGAATCTTTGAAGTTTAATTCAATCAAGTTTTTGGGTTGCGTGGTTGTAGGTTATCTTTTAGTGATTCATGGTCTTGGGGTGCTAATGGTTTCACTTTATCTAGCAGTTATTTCAAGTGCAAGAAACATACTAAAAAACAAGGAGCTAAACATGCACACATTCTCTTTCTTCACCACAGTTTCAACCTTCTCAAGCTGTGGCTTTGTTCCAACCAATGAAAACATGATGGTCTTCAGCAAAAACACAGGCCTCCTCCTCATTCTCATTCCTCAAGTCCTTTTGGGCAACACATTGCTTCCCTCATGCTTGAGATTTTCGATTTGGGTTTTGGGGAAAATTTTCAAAAAGAAAGAACACTTATGTAATTACCTTTTGAAGAACACAAGGAAACTTGGGTTCCTCCACTTGCTTCCAAGTCTCCATTCTTCACTTTTGGTTGTCACAGTTCTCGGGTTCATCATGGTACAGTTGGTAGCATTTTTGTCCTTGGAGTGGAGTTCAGACAGCTTAAGTGGCCTGAATTCTTACCAGAAAATCATTGGCGCTTTGTTTCAAAGTGTGAATTCAAGACATACCGGTGAAACTATTGTCGACCTCTCGATCATTTCTCCGGCCATCTTGGTATTGTTCGTCGTGATGATGTACCTTCCTCCTTACACTTCGTTCCTTCCCATAAAAGATGATGATCAAAATCCTCTACAACCTCAGGAAAGGAGGAAAACGAGAAGGGGAAAGGTTGTGGAGAATCTCATATTCTCACAGCTCTCGTATCTGGCCATCTTTATCGTCCTAGTATGCATAACTGAGAGGAAACAGATGAAGGAAGATCCCCTCAATTTCAATGTGTTGAATATCGTGATTGAAGTCATCAGCGCTTATGGAAATGTAGGGTTTACTACTGGCTATAGTTGTAAACGACAGATCCATCCTAATGGCGATTGCCAGGACAAATGGTATGGATTTTCAGGAAGATGGAGTGATCAGGGTAAATTAGTTCTCATAGCAGTTATGTTTTTCGGAAGACTTAAAAAATTCAATATGGATGGAGGTAGAGCATGGAAGCTTCTGTAA

Protein Analysis

555

Amino Acids

62.46

Weight (kDa)

9.28

Isoelectric Point (pI)

34.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 590
AccI GTMKAC 1 cut(s) 1185
AclWI GGATC 4 cut(s) 152, 212, 1415, 1510
AcoI YGGCCR 2 cut(s) 1206, 1368
AcsI RAATTY 7 cut(s) 238, 527, 541, 930, 1114, 1156, 1625
AcuI CTGAAG 3 cut(s) 371, 420, 811
AfaI GTAC 2 cut(s) 1059, 1238
AfeI AGCGCT 1 cut(s) 1468
AfiI CCNNNNNNNGG 3 cut(s) 127, 590, 1086
AflII CTTAAG 1 cut(s) 1102
AgeI ACCGGT 1 cut(s) 1169
AjnI CCWGG 1 cut(s) 1536
AjuI GAANNNNNNNTTGG 4 cut(s) 512, 544, 1000, 1032
Alw26I GTCTC 2 cut(s) 268, 1016
AlwI GGATC 4 cut(s) 152, 212, 1415, 1510
Ama87I CYCGRG 1 cut(s) 1043
Aor51HI AGCGCT 1 cut(s) 1468
AoxI GGCC 5 cut(s) 230, 841, 1108, 1206, 1368
ApeKI GCWGC 1 cut(s) 412
ApoI RAATTY 7 cut(s) 238, 527, 541, 930, 1114, 1156, 1625
AsiGI ACCGGT 1 cut(s) 1169
Asp700I GAANNNNTTC 1 cut(s) 932
AspA2I CCTAGG 1 cut(s) 233
AspLEI GCGC 2 cut(s) 1139, 1469
AspS9I GGNCC 1 cut(s) 568
AsuHPI GGTGA 5 cut(s) 157, 247, 605, 757, 1184
AvaI CYCGRG 1 cut(s) 1043
AvaII GGWCC 1 cut(s) 568
AvrII CCTAGG 1 cut(s) 233
AxyI CCTNAGG 1 cut(s) 1299
BalI TGGCCA 1 cut(s) 1370
BanII GRGCYC 1 cut(s) 509
BbsI GAAGAC 2 cut(s) 817, 1621
BbvI GCAGC 1 cut(s) 399
BccI CCATC 7 cut(s) 584, 814, 1217, 1379, 1527, 1560, 1631
BciT130I CCWGG 1 cut(s) 1538
BclI TGATCA 4 cut(s) 490, 562, 1279, 1573
BcoDI GTCTC 2 cut(s) 268, 1016
BfaI CTAG 6 cut(s) 65, 152, 234, 282, 695, 1385
BfmI CTRYAG 1 cut(s) 1498
BfoI RGCGCY 2 cut(s) 1140, 1470
BfrI CTTAAG 1 cut(s) 1102
BisI GCNGC 1 cut(s) 413
BlnI CCTAGG 1 cut(s) 233
BlsI GCNGC 1 cut(s) 414
Bme1390I CCNGG 1 cut(s) 1538
Bme18I GGWCC 1 cut(s) 568
BmeT110I CYCGRG 1 cut(s) 1043
BmgT120I GGNCC 1 cut(s) 568
BmiI GGNNCC 1 cut(s) 992
BmrFI CCNGG 1 cut(s) 1538
BmsI GCATC 1 cut(s) 524
BpiI GAAGAC 2 cut(s) 817, 1621
BplI GAGNNNNNCTC 2 cut(s) 296, 328
BpuEI CTTGAG 5 cut(s) 179, 386, 769, 849, 922
BsaBI GATNNNNATC 2 cut(s) 1278, 1284
BsaJI CCNNGG 4 cut(s) 84, 233, 375, 1080
BsaWI WCCGGW 1 cut(s) 1169
Bsc4I CCNNNNNNNGG 3 cut(s) 127, 590, 1086
Bse118I RCCGGY 1 cut(s) 1169
Bse1I ACTGG 1 cut(s) 1498
Bse21I CCTNAGG 1 cut(s) 1299
Bse3DI GCAATG 1 cut(s) 884
Bse8I GATNNNNATC 2 cut(s) 1278, 1284
BseBI CCWGG 1 cut(s) 1538
BseDI CCNNGG 4 cut(s) 84, 233, 375, 1080
BseGI GGATG 3 cut(s) 515, 1519, 1642
BseJI GATNNNNATC 2 cut(s) 1278, 1284
BseLI CCNNNNNNNGG 3 cut(s) 127, 590, 1086
BseMI GCAATG 1 cut(s) 884
BseMII CTCAG 2 cut(s) 1313, 1389
BseNI ACTGG 1 cut(s) 1498
BseRI GAGGAG 2 cut(s) 836, 839
BseXI GCAGC 1 cut(s) 399
BseYI CCCAGC 1 cut(s) 321
BshFI GGCC 5 cut(s) 232, 843, 1110, 1208, 1370
BshTI ACCGGT 1 cut(s) 1169
BsiHKCI CYCGRG 1 cut(s) 1043
BsiSI CCGG 2 cut(s) 1170, 1205
BslI CCNNNNNNNGG 3 cut(s) 127, 590, 1086
BsmAI GTCTC 2 cut(s) 268, 1016
BsnI GGCC 5 cut(s) 232, 843, 1110, 1208, 1370
BsoBI CYCGRG 1 cut(s) 1043
Bsp1286I GDGCHC 1 cut(s) 509
Bsp143I GATC 9 cut(s) 144, 217, 490, 562, 1194, 1279, 1420, 1515, 1573
Bsp19I CCATGG 2 cut(s) 84, 375
BspANI GGCC 5 cut(s) 232, 843, 1110, 1208, 1370
BspCNI CTCAG 2 cut(s) 1312, 1390
BspLI GGNNCC 1 cut(s) 992
BspPI GGATC 4 cut(s) 152, 212, 1415, 1510
BspTI CTTAAG 1 cut(s) 1102
BsrDI GCAATG 1 cut(s) 884
BsrFI RCCGGY 1 cut(s) 1169
BsrI ACTGG 1 cut(s) 1498
BssAI RCCGGY 1 cut(s) 1169
BssECI CCNNGG 4 cut(s) 84, 233, 375, 1080
BssMI GATC 9 cut(s) 144, 217, 490, 562, 1194, 1279, 1420, 1515, 1573
BssT1I CCWWGG 4 cut(s) 84, 233, 375, 1080
Bst2UI CCWGG 1 cut(s) 1538
Bst4CI ACNGT 5 cut(s) 277, 295, 772, 1039, 1062
BstAFI CTTAAG 1 cut(s) 1102
BstC8I GCNNGC 1 cut(s) 442
BstDEI CTNAG 4 cut(s) 10, 74, 1299, 1398
BstDSI CCRYGG 2 cut(s) 84, 375
BstF5I GGATG 3 cut(s) 515, 1519, 1642
BstH2I RGCGCY 2 cut(s) 1140, 1470
BstHHI GCGC 2 cut(s) 1139, 1469
BstKTI GATC 9 cut(s) 147, 220, 493, 565, 1197, 1282, 1423, 1518, 1576
BstMAI GTCTC 2 cut(s) 268, 1016
BstMBI GATC 9 cut(s) 144, 217, 490, 562, 1194, 1279, 1420, 1515, 1573
BstMWI GCNNNNNNNGC 4 cut(s) 397, 412, 745, 1107
BstNI CCWGG 1 cut(s) 1538
BstNSI RCATGY 2 cut(s) 289, 748
BstSCI CCNGG 1 cut(s) 1536
BstSFI CTRYAG 1 cut(s) 1498
BstV1I GCAGC 1 cut(s) 399
BstV2I GAAGAC 2 cut(s) 817, 1621
BstX2I RGATCY 2 cut(s) 1420, 1515
BstXI CCANNNNNNTGG 1 cut(s) 1526
BstYI RGATCY 2 cut(s) 1420, 1515
Bsu36I CCTNAGG 1 cut(s) 1299
BsuRI GGCC 5 cut(s) 232, 843, 1110, 1208, 1370
BtgI CCRYGG 2 cut(s) 84, 375
BtsCI GGATG 3 cut(s) 515, 1519, 1642
BtsI GCAGTG 1 cut(s) 451
BtsIMutI CAGTG 2 cut(s) 291, 451
Cac8I GCNNGC 1 cut(s) 442
CfoI GCGC 2 cut(s) 1139, 1469
Cfr10I RCCGGY 1 cut(s) 1169
Cfr13I GGNCC 1 cut(s) 568
Csp6I GTAC 2 cut(s) 1058, 1237
CspAI ACCGGT 1 cut(s) 1169
CviQI GTAC 2 cut(s) 1058, 1237
DdeI CTNAG 4 cut(s) 10, 74, 1299, 1398
DpnI GATC 9 cut(s) 146, 219, 492, 564, 1196, 1281, 1422, 1517, 1575
DpnII GATC 9 cut(s) 144, 217, 490, 562, 1194, 1279, 1420, 1515, 1573
EaeI YGGCCR 2 cut(s) 1206, 1368
Eco130I CCWWGG 4 cut(s) 84, 233, 375, 1080
Eco147I AGGCCT 1 cut(s) 843
Eco24I GRGCYC 1 cut(s) 509
Eco47I GGWCC 1 cut(s) 568
Eco47III AGCGCT 1 cut(s) 1468
Eco57I CTGAAG 3 cut(s) 371, 420, 811
Eco81I CCTNAGG 1 cut(s) 1299
Eco88I CYCGRG 1 cut(s) 1043
EcoRI GAATTC 3 cut(s) 527, 1114, 1156
EcoRII CCWGG 1 cut(s) 1536
EcoT14I CCWWGG 4 cut(s) 84, 233, 375, 1080
EcoT22I ATGCAT 1 cut(s) 1394
EcoT38I GRGCYC 1 cut(s) 509
ErhI CCWWGG 4 cut(s) 84, 233, 375, 1080
FbaI TGATCA 4 cut(s) 490, 562, 1279, 1573
FblI GTMKAC 1 cut(s) 1185
Fnu4HI GCNGC 1 cut(s) 413
FokI GGATG 3 cut(s) 502, 1506, 1649
FriOI GRGCYC 1 cut(s) 509
Fsp4HI GCNGC 1 cut(s) 413
FspBI CTAG 6 cut(s) 65, 152, 234, 282, 695, 1385
GlaI GCGC 2 cut(s) 1138, 1468
GluI GCNGC 1 cut(s) 413
GsaI CCCAGC 1 cut(s) 325
HaeII RGCGCY 2 cut(s) 1140, 1470
HaeIII GGCC 5 cut(s) 232, 843, 1110, 1208, 1370
HapII CCGG 2 cut(s) 1170, 1205
HhaI GCGC 2 cut(s) 1139, 1469
Hin6I GCGC 2 cut(s) 1137, 1467
HinP1I GCGC 2 cut(s) 1137, 1467
HincII GTYRAC 1 cut(s) 1186
HindII GTYRAC 1 cut(s) 1186
HindIII AAGCTT 1 cut(s) 1655
HinfI GANTC 3 cut(s) 596, 658, 1339
HpaII CCGG 2 cut(s) 1170, 1205
HphI GGTGA 5 cut(s) 157, 247, 605, 757, 1184
Hpy166II GTNNAC 4 cut(s) 291, 1186, 1488, 1508
Hpy188I TCNGA 2 cut(s) 1096, 1613
Hpy188III TCNNGA 7 cut(s) 566, 1161, 1192, 1228, 1301, 1450, 1560
Hpy8I GTNNAC 4 cut(s) 291, 1186, 1488, 1508
Hpy99I CGWCG 1 cut(s) 1229
HpyAV CCTTC 7 cut(s) 231, 468, 790, 1250, 1271, 1314, 1408
HpyCH4III ACNGT 5 cut(s) 277, 295, 772, 1039, 1062
HpyCH4V TGCA 4 cut(s) 34, 713, 748, 1392
HpyF10VI GCNNNNNNNGC 4 cut(s) 397, 412, 745, 1107
HpyF3I CTNAG 4 cut(s) 10, 74, 1299, 1398
HspAI GCGC 2 cut(s) 1137, 1467
Ksp22I TGATCA 4 cut(s) 490, 562, 1279, 1573
Kzo9I GATC 9 cut(s) 144, 217, 490, 562, 1194, 1279, 1420, 1515, 1573
LmnI GCTCC 1 cut(s) 736
Lsp1109I GCAGC 1 cut(s) 399
LweI GCATC 1 cut(s) 524
MaeI CTAG 6 cut(s) 65, 152, 234, 282, 695, 1385
MaeIII GTNAC 2 cut(s) 163, 1033
MalI GATC 9 cut(s) 146, 219, 492, 564, 1196, 1281, 1422, 1517, 1575
MboI GATC 9 cut(s) 144, 217, 490, 562, 1194, 1279, 1420, 1515, 1573
MboII GAAGA 7 cut(s) 754, 817, 982, 1011, 1430, 1575, 1626
MflI RGATCY 2 cut(s) 1420, 1515
MhlI GDGCHC 1 cut(s) 509
MlsI TGGCCA 1 cut(s) 1370
MluNI TGGCCA 1 cut(s) 1370
MmeI TCCRAC 2 cut(s) 361, 827
Mox20I TGGCCA 1 cut(s) 1370
Mph1103I ATGCAT 1 cut(s) 1394
MroXI GAANNNNTTC 1 cut(s) 932
MscI TGGCCA 1 cut(s) 1370
MseI TTAA 5 cut(s) 335, 539, 609, 1103, 1620
MslI CAYNNNNRTG 3 cut(s) 344, 1170, 1524
Msp20I TGGCCA 1 cut(s) 1370
MspA1I CMGCKG 1 cut(s) 391
MspCI CTTAAG 1 cut(s) 1102
MspI CCGG 2 cut(s) 1170, 1205
MspR9I CCNGG 1 cut(s) 1538
MvaI CCWGG 1 cut(s) 1538
MwoI GCNNNNNNNGC 4 cut(s) 397, 412, 745, 1107
NcoI CCATGG 2 cut(s) 84, 375
NdeII GATC 9 cut(s) 144, 217, 490, 562, 1194, 1279, 1420, 1515, 1573
NlaIV GGNNCC 1 cut(s) 992
NmuCI GTSAC 2 cut(s) 163, 1033
NsiI ATGCAT 1 cut(s) 1394
NspI RCATGY 2 cut(s) 289, 748
PceI AGGCCT 1 cut(s) 843
PdmI GAANNNNTTC 1 cut(s) 932
PfeI GAWTC 3 cut(s) 596, 658, 1339
PflMI CCANNNNNTGG 1 cut(s) 590
PinAI ACCGGT 1 cut(s) 1169
PkrI GCNGC 1 cut(s) 414
Psp6I CCWGG 1 cut(s) 1536
PspFI CCCAGC 1 cut(s) 321
PspGI CCWGG 1 cut(s) 1536
PspN4I GGNNCC 1 cut(s) 992
PspPI GGNCC 1 cut(s) 568
PsuI RGATCY 2 cut(s) 1420, 1515
PvuII CAGCTG 1 cut(s) 391
RsaI GTAC 2 cut(s) 1059, 1238
RsaNI GTAC 2 cut(s) 1058, 1237
RseI CAYNNNNRTG 3 cut(s) 344, 1170, 1524
SalI GTCGAC 1 cut(s) 1184
SaqAI TTAA 5 cut(s) 335, 539, 609, 1103, 1620
SatI GCNGC 1 cut(s) 413
Sau3AI GATC 9 cut(s) 144, 217, 490, 562, 1194, 1279, 1420, 1515, 1573
Sau96I GGNCC 1 cut(s) 568
ScrFI CCNGG 1 cut(s) 1538
SduI GDGCHC 1 cut(s) 509
SfaNI GCATC 1 cut(s) 524
SfcI CTRYAG 1 cut(s) 1498
SinI GGWCC 1 cut(s) 568
SmiMI CAYNNNNRTG 3 cut(s) 344, 1170, 1524
SmlI CTYRAG 6 cut(s) 194, 401, 784, 864, 901, 1102
SmoI CTYRAG 6 cut(s) 194, 401, 784, 864, 901, 1102
SseBI AGGCCT 1 cut(s) 843
SspI AATATT 1 cut(s) 481
SspMI CTAG 6 cut(s) 65, 152, 234, 282, 695, 1385
StuI AGGCCT 1 cut(s) 843
StyD4I CCNGG 1 cut(s) 1536
StyI CCWWGG 4 cut(s) 84, 233, 375, 1080
TaaI ACNGT 5 cut(s) 277, 295, 772, 1039, 1062
TaqI TCGA 4 cut(s) 147, 911, 1185, 1193
TfiI GAWTC 3 cut(s) 596, 658, 1339
Tru1I TTAA 5 cut(s) 335, 539, 609, 1103, 1620
Tru9I TTAA 5 cut(s) 335, 539, 609, 1103, 1620
TscAI CASTG 2 cut(s) 298, 451
TseFI GTSAC 2 cut(s) 163, 1033
TseI GCWGC 1 cut(s) 412
Tsp45I GTSAC 2 cut(s) 163, 1033
TspDTI ATGAA 8 cut(s) 17, 42, 340, 450, 650, 825, 1039, 1427
TspGWI ACGGA 1 cut(s) 113
TspRI CASTG 2 cut(s) 298, 451
Van91I CCANNNNNTGG 1 cut(s) 590
Vha464I CTTAAG 1 cut(s) 1102
VpaK11BI GGWCC 1 cut(s) 568
XapI RAATTY 7 cut(s) 238, 527, 541, 930, 1114, 1156, 1625
XceI RCATGY 2 cut(s) 289, 748
XcmI CCANNNNNNNNNTGG 2 cut(s) 298, 1130
XmaJI CCTAGG 1 cut(s) 233
XmiI GTMKAC 1 cut(s) 1185
XmnI GAANNNNTTC 1 cut(s) 932
XspI CTAG 6 cut(s) 65, 152, 234, 282, 695, 1385
Zsp2I ATGCAT 1 cut(s) 1394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.