Rroxscaffold_5G00343040

Cation transport protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0002671
Physical Location & Seq
Reverse (-)
12223177 .. 12229343
6167 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00343040.1

Sequence Viewer

Length: 1767 bp
ATGCACCCCGTGGACTTCCCGGATAACCTCAATCAAGCGGCAAAGGCGAAGGTGATCGGAAACTCGGCGGTGTGCAGCAAGCTGGCCGGAAAACATGGAAGCCTAGAAACCTGCAACCCCGACCTCCTCCGACCTCGATCGGCGCCCGAAGAGGTCCGGGGCACCTCCGCCTCCATCCGGCCAGCCCCGCGCCACCATCGCAACCTCGAAAGCTCTGCTGCGTGGACGTCCGCACTTTTCCGGGTTGCAGCTAAGCAATTCTGGGTGGAACTAGTTTATTTTGTCACCCTTTCCTTTTTGGGTTATTGGGTTCTCAAGGTATTGCCAGTTAGAACCACCGACTCTTTTACCCCTAGGAACTTAGATTTGTTCTTCACCTCAGTTTCTGCCACAACCGTTTCGAGCATGTCCACAGTTGAAATGGAGGTCTTCTCCAATGGCCAGCTCATCTTAATGACCATCCTAATGTTCATAGGTGGGGAGGTCTTCACCTCCATGGTTGGACTTCATTTCAAGAAGTTCAAGCTCATGATGATGATGAGCACAAAAGAGAAGATTGCTTCAGTTAACAGCGATGTTAGCTCTTCATCCAGTCCCGCAAAGGCGATTGATGAGAATATTGAATTGGGCTTGGCAATCAAGCCCGAATTTCCTCACTACCAAATTGATATAATTGCAGCAGTAGATGATCAATCCTTGACACTTCAGAATTCCATTAACCTTTTGGGTTACGTTGTTTTAGCTTATCTTGTAGTGGTTCATTTCCTTGGGGTGGCTATGGTTTTGGTTTATCTAGCATTTACTTCGAGTGCAAGAAACGTATTAAAGAACAAGGGGATAAATGTTCATACATTCTCATTGTTCACCACAGTTTCAACTTTCTCAAGTTGTGGTTTTGTTCCCACCAATGAAAACATGATTGTCTTTAGCAAAAACTCCGGTCTCCTTCTAATACTCATTCCTCAAGTCCTTCTTGGGAACACATTGTATCCATCTTGCTTGAGATTTTCAATTTGGCTTTTGGGAAAAATTTTCAAAAAGCAAAGAGATTCTTGCAATTACCTGTTGAAGAAGACAAAGGAGGTTGGATACCTACACTTGCTTCCTAGTCTGCACTCATCACTCTTGGTCGTTACAGTTTTTGGGTTCATCCTGGTACAACTTCTACCTTTTGCCTCCATGGAGTGGAGTTCAGAAAGCTTAAGTGGACTTAATTCTTACCAGAAAATCATTGGATCTTTGTTCCAAACCGTCAATTCAAGACATACCGGTGAAACCATCGTCGACCTCTCCATCATTTCTCCCGCAATCTTGGTATTATTCATCGTGATGATGTATCTTCCTCCTTACACTTCGTTTCTCCCCGCTATAGAAAATGATCGATATGATCTACAATCTCATGATCAGAGGAAGAAAAAGAGAAGAGGAATGCTCATGGTTAATCTCATATTCTCACAGCTCTCCTATTTGACCATATTTATCATTCTAGTCTGCATAACGGAGAGGAAAAGCTTGAAAGAAGATCCCCTCAATTTCAATGTACTCAATATCGTGCTTGAAGTCATCAGTGCTTATGGAAATGTAGGGTTTACGACCGGCTATAGTTGTAAACGCCAGCTCAACCCTAACGGCGATTGTCAGGATAAATTGTATGGATTTTCAGGAAGATGGAGTGACGAGGGGAAAATAGTTCTTATAGCTGTCATGTTCTTCGGAAGACTCAAGAAATTCAACATGGATGGAGGTAAAGGATGGAAGCTCCTCTAA

Protein Analysis

588

Amino Acids

65.62

Weight (kDa)

9.25

Isoelectric Point (pI)

35.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TrkH PF02386 238 - 575 3.7e-29 Cation transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 230
Acc36I ACCTGC 1 cut(s) 119
AccB1I GGYRCC 2 cut(s) 142, 161
AccB7I CCANNNNNTGG 1 cut(s) 1185
AccI GTMKAC 1 cut(s) 1284
AccII CGCG 1 cut(s) 190
AciI CCGC 8 cut(s) 38, 68, 168, 188, 231, 597, 1305, 1365
AclWI GGATC 2 cut(s) 1243, 1517
AcoI YGGCCR 3 cut(s) 84, 179, 439
AcsI RAATTY 4 cut(s) 647, 709, 1029, 1727
AcuI CTGAAG 2 cut(s) 546, 689
AcyI GRCGYC 2 cut(s) 143, 227
AdeI CACNNNGTG 1 cut(s) 10
AfaI GTAC 2 cut(s) 1158, 1542
AfiI CCNNNNNNNGG 3 cut(s) 177, 772, 1185
AflII CTTAAG 1 cut(s) 1201
AgeI ACCGGT 1 cut(s) 1268
AhlI ACTAGT 1 cut(s) 271
AjnI CCWGG 1 cut(s) 1152
AjuI GAANNNNNNNTTGG 2 cut(s) 608, 640
Alw21I GWGCWC 1 cut(s) 545
Alw26I GTCTC 1 cut(s) 947
AlwI GGATC 2 cut(s) 1243, 1517
AlwNI CAGNNNCTG 1 cut(s) 386
AoxI GGCC 3 cut(s) 84, 179, 439
ApeKI GCWGC 4 cut(s) 75, 218, 248, 677
ApoI RAATTY 4 cut(s) 647, 709, 1029, 1727
AsiGI ACCGGT 1 cut(s) 1268
AspA2I CCTAGG 1 cut(s) 353
AspLEI GCGC 2 cut(s) 145, 192
AspS9I GGNCC 1 cut(s) 154
AsuC2I CCSGG 3 cut(s) 20, 158, 242
AsuHPI GGTGA 6 cut(s) 64, 277, 367, 481, 856, 1283
AvaII GGWCC 1 cut(s) 154
AvrII CCTAGG 1 cut(s) 353
BaeGI GKGCMC 1 cut(s) 164
BalI TGGCCA 1 cut(s) 441
BanI GGYRCC 2 cut(s) 142, 161
BbsI GAAGAC 4 cut(s) 421, 478, 1079, 1723
Bbv12I GWGCWC 1 cut(s) 545
BbvI GCAGC 4 cut(s) 87, 205, 260, 689
BccI CCATC 9 cut(s) 182, 204, 467, 1000, 1286, 1301, 1662, 1733, 1746
BceAI ACGGC 1 cut(s) 1645
BcgI CGANNNNNNTGC 4 cut(s) 197, 231, 786, 820
BciT130I CCWGG 1 cut(s) 1154
BciVI GTATCC 2 cut(s) 999, 1082
BclI TGATCA 2 cut(s) 688, 1402
BcnI CCSGG 3 cut(s) 20, 158, 242
BcoDI GTCTC 1 cut(s) 947
BcuI ACTAGT 1 cut(s) 271
BfaI CTAG 6 cut(s) 104, 272, 354, 794, 1107, 1487
BfmI CTRYAG 2 cut(s) 1368, 1600
BfoI RGCGCY 1 cut(s) 146
BfrI CTTAAG 1 cut(s) 1201
BfuAI ACCTGC 1 cut(s) 119
BfuI GTATCC 2 cut(s) 999, 1082
BisI GCNGC 5 cut(s) 39, 76, 219, 249, 678
BlnI CCTAGG 1 cut(s) 353
BlpI GCTNAGC 1 cut(s) 252
BlsI GCNGC 5 cut(s) 40, 77, 220, 250, 679
Bme1390I CCNGG 4 cut(s) 20, 158, 242, 1154
Bme18I GGWCC 1 cut(s) 154
BmgT120I GGNCC 1 cut(s) 154
BmiI GGNNCC 2 cut(s) 144, 163
BmrFI CCNGG 4 cut(s) 20, 158, 242, 1154
BpiI GAAGAC 4 cut(s) 421, 478, 1079, 1723
BplI GAGNNNNNCTC 4 cut(s) 416, 448, 1416, 1448
Bpu1102I GCTNAGC 1 cut(s) 252
BpuEI CTTGAG 5 cut(s) 299, 868, 948, 1021, 1706
BpuMI CCSGG 3 cut(s) 20, 158, 242
Bsa29I ATCGAT 1 cut(s) 1381
BsaHI GRCGYC 2 cut(s) 143, 227
BsaI GGTCTC 1 cut(s) 947
BsaJI CCNNGG 6 cut(s) 9, 157, 353, 495, 766, 1179
BsaWI WCCGGW 2 cut(s) 938, 1268
Bsc4I CCNNNNNNNGG 3 cut(s) 177, 772, 1185
Bse118I RCCGGY 2 cut(s) 1268, 1595
Bse1I ACTGG 2 cut(s) 326, 591
BseBI CCWGG 1 cut(s) 1154
BseCI ATCGAT 1 cut(s) 1381
BseDI CCNNGG 6 cut(s) 9, 157, 353, 495, 766, 1179
BseGI GGATG 6 cut(s) 174, 459, 587, 1149, 1744, 1757
BseLI CCNNNNNNNGG 3 cut(s) 177, 772, 1185
BseMII CTCAG 1 cut(s) 393
BseNI ACTGG 2 cut(s) 326, 591
BseRI GAGGAG 2 cut(s) 116, 1751
BseSI GKGCMC 1 cut(s) 164
BseXI GCAGC 4 cut(s) 87, 205, 260, 689
BsgI GTGCAG 2 cut(s) 94, 1097
Bsh1236I CGCG 1 cut(s) 190
Bsh1285I CGRYCG 2 cut(s) 140, 1596
BshFI GGCC 3 cut(s) 86, 181, 441
BshNI GGYRCC 2 cut(s) 142, 161
BshTI ACCGGT 1 cut(s) 1268
BshVI ATCGAT 1 cut(s) 1381
BsiEI CGRYCG 2 cut(s) 140, 1596
BsiHKAI GWGCWC 1 cut(s) 545
BsiSI CCGG 8 cut(s) 20, 87, 157, 178, 241, 939, 1269, 1596
BslFI GGGAC 1 cut(s) 579
BslI CCNNNNNNNGG 3 cut(s) 177, 772, 1185
BsmAI GTCTC 1 cut(s) 947
BsmFI GGGAC 1 cut(s) 579
BsmI GAATGC 1 cut(s) 1434
BsnI GGCC 3 cut(s) 86, 181, 441
Bso31I GGTCTC 1 cut(s) 947
Bsp1286I GDGCHC 2 cut(s) 164, 545
Bsp143I GATC 8 cut(s) 54, 137, 688, 1235, 1378, 1387, 1402, 1522
Bsp1720I GCTNAGC 1 cut(s) 252
Bsp19I CCATGG 2 cut(s) 495, 1179
BspACI CCGC 8 cut(s) 38, 68, 168, 188, 231, 597, 1305, 1365
BspANI GGCC 3 cut(s) 86, 181, 441
BspCNI CTCAG 1 cut(s) 392
BspDI ATCGAT 1 cut(s) 1381
BspFNI CGCG 1 cut(s) 190
BspHI TCATGA 2 cut(s) 528, 1399
BspLI GGNNCC 2 cut(s) 144, 163
BspMI ACCTGC 1 cut(s) 119
BspPI GGATC 2 cut(s) 1243, 1517
BspQI GCTCTTC 1 cut(s) 589
BspT107I GGYRCC 2 cut(s) 142, 161
BspTI CTTAAG 1 cut(s) 1201
BspTNI GGTCTC 1 cut(s) 947
BsrFI RCCGGY 2 cut(s) 1268, 1595
BsrI ACTGG 2 cut(s) 326, 591
BssAI RCCGGY 2 cut(s) 1268, 1595
BssECI CCNNGG 6 cut(s) 9, 157, 353, 495, 766, 1179
BssMI GATC 8 cut(s) 54, 137, 688, 1235, 1378, 1387, 1402, 1522
BssNI GRCGYC 2 cut(s) 143, 227
BssT1I CCWWGG 4 cut(s) 353, 495, 766, 1179
Bst2UI CCWGG 1 cut(s) 1154
Bst4CI ACNGT 5 cut(s) 397, 415, 871, 1138, 1252
Bst6I CTCTTC 3 cut(s) 144, 589, 1417
BstACI GRCGYC 2 cut(s) 143, 227
BstAFI CTTAAG 1 cut(s) 1201
BstC8I GCNNGC 5 cut(s) 80, 84, 183, 443, 1616
BstDEI CTNAG 3 cut(s) 252, 361, 379
BstDSI CCRYGG 3 cut(s) 9, 495, 1179
BstF5I GGATG 6 cut(s) 174, 459, 587, 1149, 1744, 1757
BstFNI CGCG 1 cut(s) 190
BstH2I RGCGCY 1 cut(s) 146
BstHHI GCGC 2 cut(s) 145, 192
BstKTI GATC 8 cut(s) 57, 140, 691, 1238, 1381, 1390, 1405, 1525
BstMAI GTCTC 1 cut(s) 947
BstMBI GATC 8 cut(s) 54, 137, 688, 1235, 1378, 1387, 1402, 1522
BstMCI CGRYCG 2 cut(s) 140, 1596
BstMWI GCNNNNNNNGC 4 cut(s) 44, 187, 198, 579
BstNI CCWGG 1 cut(s) 1154
BstNSI RCATGY 1 cut(s) 409
BstSCI CCNGG 4 cut(s) 18, 156, 240, 1152
BstSFI CTRYAG 2 cut(s) 1368, 1600
BstSLI GKGCMC 1 cut(s) 164
BstUI CGCG 1 cut(s) 190
BstV1I GCAGC 4 cut(s) 87, 205, 260, 689
BstV2I GAAGAC 4 cut(s) 421, 478, 1079, 1723
BstX2I RGATCY 2 cut(s) 1235, 1522
BstYI RGATCY 2 cut(s) 1235, 1522
Bsu15I ATCGAT 1 cut(s) 1381
BsuI GTATCC 2 cut(s) 999, 1082
BsuRI GGCC 3 cut(s) 86, 181, 441
BsuTUI ATCGAT 1 cut(s) 1381
BtgI CCRYGG 3 cut(s) 9, 495, 1179
BtgZI GCGATG 2 cut(s) 182, 588
BtsCI GGATG 6 cut(s) 174, 459, 587, 1149, 1744, 1757
BtsIMutI CAGTG 1 cut(s) 1573
BveI ACCTGC 1 cut(s) 119
Cac8I GCNNGC 5 cut(s) 80, 84, 183, 443, 1616
CaiI CAGNNNCTG 1 cut(s) 386
CciI TCATGA 2 cut(s) 528, 1399
CfoI GCGC 2 cut(s) 145, 192
Cfr10I RCCGGY 2 cut(s) 1268, 1595
Cfr13I GGNCC 1 cut(s) 154
ClaI ATCGAT 1 cut(s) 1381
Csp6I GTAC 2 cut(s) 1157, 1541
CspAI ACCGGT 1 cut(s) 1268
CviQI GTAC 2 cut(s) 1157, 1541
DdeI CTNAG 3 cut(s) 252, 361, 379
DinI GGCGCC 1 cut(s) 144
DpnI GATC 8 cut(s) 56, 139, 690, 1237, 1380, 1389, 1404, 1524
DpnII GATC 8 cut(s) 54, 137, 688, 1235, 1378, 1387, 1402, 1522
DraIII CACNNNGTG 1 cut(s) 10
EaeI YGGCCR 3 cut(s) 84, 179, 439
Eam1104I CTCTTC 3 cut(s) 144, 589, 1417
EarI CTCTTC 3 cut(s) 144, 589, 1417
EciI GGCGGA 1 cut(s) 157
Eco130I CCWWGG 4 cut(s) 353, 495, 766, 1179
Eco31I GGTCTC 1 cut(s) 947
Eco47I GGWCC 1 cut(s) 154
Eco57I CTGAAG 2 cut(s) 546, 689
EcoRI GAATTC 1 cut(s) 709
EcoRII CCWGG 1 cut(s) 1152
EcoT14I CCWWGG 4 cut(s) 353, 495, 766, 1179
EgeI GGCGCC 1 cut(s) 144
EheI GGCGCC 1 cut(s) 144
ErhI CCWWGG 4 cut(s) 353, 495, 766, 1179
FalI AAGNNNNNCTT 4 cut(s) 957, 989, 1036, 1068
FaqI GGGAC 1 cut(s) 579
FauI CCCGC 4 cut(s) 195, 604, 1312, 1372
FbaI TGATCA 2 cut(s) 688, 1402
FblI GTMKAC 1 cut(s) 1284
Fnu4HI GCNGC 5 cut(s) 39, 76, 219, 249, 678
FokI GGATG 5 cut(s) 161, 446, 574, 1136, 1751
Fsp4HI GCNGC 5 cut(s) 39, 76, 219, 249, 678
FspBI CTAG 6 cut(s) 104, 272, 354, 794, 1107, 1487
GlaI GCGC 2 cut(s) 144, 191
GluI GCNGC 5 cut(s) 39, 76, 219, 249, 678
HaeII RGCGCY 1 cut(s) 146
HaeIII GGCC 3 cut(s) 86, 181, 441
HapII CCGG 8 cut(s) 20, 87, 157, 178, 241, 939, 1269, 1596
HhaI GCGC 2 cut(s) 145, 192
Hin1I GRCGYC 2 cut(s) 143, 227
Hin6I GCGC 2 cut(s) 143, 190
HinP1I GCGC 2 cut(s) 143, 190
HincII GTYRAC 2 cut(s) 568, 1285
HindII GTYRAC 2 cut(s) 568, 1285
HindIII AAGCTT 2 cut(s) 1198, 1510
HinfI GANTC 3 cut(s) 341, 1049, 1719
HpaI GTTAAC 1 cut(s) 568
HpaII CCGG 8 cut(s) 20, 87, 157, 178, 241, 939, 1269, 1596
HphI GGTGA 6 cut(s) 64, 277, 367, 481, 856, 1283
Hpy166II GTNNAC 9 cut(s) 13, 225, 411, 568, 864, 1208, 1285, 1590, 1610
Hpy188I TCNGA 6 cut(s) 59, 131, 708, 1195, 1407, 1715
Hpy188III TCNNGA 8 cut(s) 514, 529, 1260, 1327, 1400, 1640, 1662, 1723
Hpy8I GTNNAC 9 cut(s) 13, 225, 411, 568, 864, 1208, 1285, 1590, 1610
Hpy99I CGWCG 1 cut(s) 1286
HpyAV CCTTC 3 cut(s) 43, 956, 980
HpyCH4III ACNGT 5 cut(s) 397, 415, 871, 1138, 1252
HpyCH4IV ACGT 3 cut(s) 227, 732, 819
HpyCH4V TGCA 9 cut(s) 4, 75, 114, 248, 677, 812, 1056, 1114, 1494
HpyF10VI GCNNNNNNNGC 4 cut(s) 44, 187, 198, 579
HpyF3I CTNAG 3 cut(s) 252, 361, 379
HpySE526I ACGT 3 cut(s) 227, 732, 819
Hsp92I GRCGYC 2 cut(s) 143, 227
HspAI GCGC 2 cut(s) 143, 190
KasI GGCGCC 1 cut(s) 142
Ksp22I TGATCA 2 cut(s) 688, 1402
KspAI GTTAAC 1 cut(s) 568
Kzo9I GATC 8 cut(s) 54, 137, 688, 1235, 1378, 1387, 1402, 1522
LguI GCTCTTC 1 cut(s) 589
LmnI GCTCC 1 cut(s) 1764
Lsp1109I GCAGC 4 cut(s) 87, 205, 260, 689
MaeI CTAG 6 cut(s) 104, 272, 354, 794, 1107, 1487
MaeII ACGT 3 cut(s) 227, 732, 819
MaeIII GTNAC 4 cut(s) 283, 728, 1132, 1673
MalI GATC 8 cut(s) 56, 139, 690, 1237, 1380, 1389, 1404, 1524
MboI GATC 8 cut(s) 54, 137, 688, 1235, 1378, 1387, 1402, 1522
MflI RGATCY 2 cut(s) 1235, 1522
MhlI GDGCHC 2 cut(s) 164, 545
MlsI TGGCCA 1 cut(s) 441
MluNI TGGCCA 1 cut(s) 441
Mly113I GGCGCC 1 cut(s) 143
MlyI GAGTC 2 cut(s) 335, 1713
MmeI TCCRAC 3 cut(s) 154, 481, 1066
Mox20I TGGCCA 1 cut(s) 441
MscI TGGCCA 1 cut(s) 441
MseI TTAA 7 cut(s) 452, 567, 717, 824, 1202, 1212, 1440
MslI CAYNNNNRTG 6 cut(s) 452, 464, 494, 533, 1269, 1328
Msp20I TGGCCA 1 cut(s) 441
MspCI CTTAAG 1 cut(s) 1201
MspI CCGG 8 cut(s) 20, 87, 157, 178, 241, 939, 1269, 1596
MspR9I CCNGG 4 cut(s) 20, 158, 242, 1154
Mva1269I GAATGC 1 cut(s) 1434
MvaI CCWGG 1 cut(s) 1154
MvnI CGCG 1 cut(s) 190
MwoI GCNNNNNNNGC 4 cut(s) 44, 187, 198, 579
NarI GGCGCC 1 cut(s) 143
NciI CCSGG 3 cut(s) 20, 158, 242
NcoI CCATGG 2 cut(s) 495, 1179
NdeII GATC 8 cut(s) 54, 137, 688, 1235, 1378, 1387, 1402, 1522
NlaIV GGNNCC 2 cut(s) 144, 163
NmeAIII GCCGAG 1 cut(s) 44
NmuCI GTSAC 2 cut(s) 283, 1673
NspI RCATGY 1 cut(s) 409
PagI TCATGA 2 cut(s) 528, 1399
PciSI GCTCTTC 1 cut(s) 589
PctI GAATGC 1 cut(s) 1434
PfeI GAWTC 1 cut(s) 1049
PflMI CCANNNNNTGG 1 cut(s) 1185
PfoI TCCNGGA 1 cut(s) 18
PinAI ACCGGT 1 cut(s) 1268
PkrI GCNGC 5 cut(s) 40, 77, 220, 250, 679
Ple19I CGATCG 1 cut(s) 140
PleI GAGTC 2 cut(s) 335, 1713
PluTI GGCGCC 1 cut(s) 146
PpsI GAGTC 2 cut(s) 335, 1713
Psp6I CCWGG 1 cut(s) 1152
PspGI CCWGG 1 cut(s) 1152
PspN4I GGNNCC 2 cut(s) 144, 163
PspPI GGNCC 1 cut(s) 154
PstNI CAGNNNCTG 1 cut(s) 386
PsuI RGATCY 2 cut(s) 1235, 1522
PvuI CGATCG 1 cut(s) 140
RsaI GTAC 2 cut(s) 1158, 1542
RsaNI GTAC 2 cut(s) 1157, 1541
RseI CAYNNNNRTG 6 cut(s) 452, 464, 494, 533, 1269, 1328
SalI GTCGAC 1 cut(s) 1283
SapI GCTCTTC 1 cut(s) 589
SaqAI TTAA 7 cut(s) 452, 567, 717, 824, 1202, 1212, 1440
SatI GCNGC 5 cut(s) 39, 76, 219, 249, 678
Sau3AI GATC 8 cut(s) 54, 137, 688, 1235, 1378, 1387, 1402, 1522
Sau96I GGNCC 1 cut(s) 154
SchI GAGTC 2 cut(s) 335, 1713
ScrFI CCNGG 4 cut(s) 20, 158, 242, 1154
SduI GDGCHC 2 cut(s) 164, 545
SfcI CTRYAG 2 cut(s) 1368, 1600
SfoI GGCGCC 1 cut(s) 144
SinI GGWCC 1 cut(s) 154
SmiMI CAYNNNNRTG 6 cut(s) 452, 464, 494, 533, 1269, 1328
SmlI CTYRAG 6 cut(s) 314, 883, 963, 1000, 1201, 1721
SmoI CTYRAG 6 cut(s) 314, 883, 963, 1000, 1201, 1721
SpeI ACTAGT 1 cut(s) 271
SsiI CCGC 8 cut(s) 38, 68, 168, 188, 231, 597, 1305, 1365
SspDI GGCGCC 1 cut(s) 142
SspI AATATT 1 cut(s) 619
SspMI CTAG 6 cut(s) 104, 272, 354, 794, 1107, 1487
StyD4I CCNGG 4 cut(s) 18, 156, 240, 1152
StyI CCWWGG 4 cut(s) 353, 495, 766, 1179
TaaI ACNGT 5 cut(s) 397, 415, 871, 1138, 1252
TaiI ACGT 3 cut(s) 230, 735, 822
TaqI TCGA 6 cut(s) 136, 207, 401, 806, 1284, 1381
TatI WGTACW 1 cut(s) 1540
TauI GCSGC 1 cut(s) 41
TfiI GAWTC 1 cut(s) 1049
Tru1I TTAA 7 cut(s) 452, 567, 717, 824, 1202, 1212, 1440
Tru9I TTAA 7 cut(s) 452, 567, 717, 824, 1202, 1212, 1440
TscAI CASTG 1 cut(s) 1573
TseFI GTSAC 2 cut(s) 283, 1673
TseI GCWGC 4 cut(s) 75, 218, 248, 677
Tsp45I GTSAC 2 cut(s) 283, 1673
TspDTI ATGAA 8 cut(s) 460, 497, 576, 749, 836, 924, 1138, 1312
TspGWI ACGGA 1 cut(s) 1514
TspRI CASTG 1 cut(s) 1573
Van91I CCANNNNNTGG 1 cut(s) 1185
Vha464I CTTAAG 1 cut(s) 1201
VpaK11BI GGWCC 1 cut(s) 154
XapI RAATTY 4 cut(s) 647, 709, 1029, 1727
XceI RCATGY 1 cut(s) 409
XcmI CCANNNNNNNNNTGG 3 cut(s) 418, 721, 1229
XmaJI CCTAGG 1 cut(s) 353
XmiI GTMKAC 1 cut(s) 1284
XspI CTAG 6 cut(s) 104, 272, 354, 794, 1107, 1487
ZraI GACGTC 1 cut(s) 228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.