AT4G19440

Pentacotripeptide-repeat region of PRORP

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0003055
Physical Location & Seq
Reverse (-)
10600692 .. 10604624
3933 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G19440.1

Sequence Viewer

Length: 2517 bp
ATGGCGGCTCTTCTCTATTTCCCTAAAATCTCTTCGCAAATGACTTCCTCACATTTCATCTCTTTCTCACCAATGGATTTGAGGAGACTTTCTCGCGCAAGCTACTTATTCACTCGCCGCTTGAAATTCATAGCGAAATCTCGAAAATGCTTTCATACAAGCCGATACCTGCAACAGTGTGTTCATCGGCCGGATAAATCGGAAGAGACTTCCTCTGATCGGCATTTACACGAACGATTATCTTCAGTTTTGTCGAAGAGATCTCTAGATTACGAGCAGTGTAAACAACTGATAACTGTTCTATCGCCTCTCGAATTCGATAGGTTGTTTCCTGAGTTTCGATCCAAAGTTAATCCCAAGACGGCTTTGGATTTCTTCCGATTAGCTTCTGATTCGTTTAGTTTCTCCTTTAGTCTCCGTTCTTATTGTTTATTGATAGGTTTATTGCTTGATGCGAATCTGTTATCGGCTGCTAGGGTAGTTTTGATTCGTTTGATCAATGGGAATGTACCGGTTTTGCCTTGTGGTTTGAGAGATAGTCGAGTTGCGATTGCGGATGCAATGGCGAGTTTGAGTTTGTGTTTTGATGAAGAAATCAGAAGGAAAATGTCGGATTTGTTGATTGAAGTTTATTGCACACAGTTCAAGCGTGATGGTTGTTATTTAGCTCTTGATGTATTTCCTGTTCTTGCAAACAAGGGTATGTTTCCTTCTAAGACGACTTGCAACATTTTGTTGACTTCTCTAGTGAGAGCTAATGAGTTTCAGAAGTGTTGTGAAGCTTTTGATGTTGTTTGCAAAGGGGTTTCTCCGGATGTTTACTTGTTCACTACAGCGATTAATGCGTTTTGCAAGGGAGGTAAAGTTGAGGAGGCCGTTAAGTTGTTCTCAAAAATGGAAGAAGCGGGTGTTGCACCAAACGTTGTCACTTTTAATACTGTTATTGATGGACTTGGGATGTGTGGAAGGTATGATGAGGCGTTTATGTTTAAAGAAAAGATGGTAGAAAGAGGCATGGAACCAACTCTTATCACTTATAGTATTCTTGTCAAGGGTTTGACCAGGGCTAAGAGGATTGGTGATGCTTATTTTGTCTTGAAGGAAATGACAAAGAAAGGGTTTCCTCCTAATGTTATTGTATATAATAATTTGATTGATAGTTTCATCGAGGCTGGAAGTTTGAACAAAGCTATTGAGATAAAGGATCTCATGGTTTCGAAAGGGTTGTCTCTCACATCGTCGACGTATAATACTCTCATAAAGGGATACTGCAAGAACGGTCAAGCAGATAATGCGGAGCGTCTCCTGAAGGAAATGCTGTCGATTGGTTTTAATGTAAATCAGGGCTCCTTTACATCTGTGATTTGCTTGTTGTGCAGTCATCTTATGTTTGACTCAGCACTTCGTTTTGTTGGAGAGATGCTATTACGCAACATGAGTCCTGGTGGTGGATTACTTACTACATTGATTTCTGGTCTCTGTAAGCATGGGAAACACTCAAAGGCACTAGAACTTTGGTTTCAATTTCTAAATAAAGGTTTTGTAGTGGACACGAGGACTTCAAATGCTTTACTTCATGGACTCTGTGAAGCAGGGAAGCTGGATGAAGCTTTTAGGATTCAAAAGGAGATATTAGGGCGTGGCTGTGTTATGGATAGAGTTTCCTATAACACGTTGATTTCTGGATGTTGCGGAAAGAAGAAACTAGATGAAGCTTTTATGTTCTTGGATGAAATGGTTAAGAGAGGACTTAAGCCTGACAATTATACTTATAGCATATTGATTTGCGGGCTGTTTAATATGAATAAAGTTGAGGAGGCCATACAGTTTTGGGATGATTGTAAACGGAATGGCATGCTTCCAGATGTTTATACATATTCGGTGATGATAGATGGATGTTGTAAAGCTGAAAGAACAGAAGAGGGTCAGGAATTTTTTGATGAGATGATGAGCAAAAACGTGCAGCCAAATACTGTTGTTTACAATCATCTTATCAGAGCATACTGTAGAAGCGGAAGGCTATCGATGGCCTTGGAACTCCGTGAAGATATGAAACACAAAGGAATTTCACCTAATTCTGCTACATACACTTCACTAATAAAGGGGATGTCAATCATTAGCCGTGTTGAGGAGGCAAAACTCCTCTTCGAGGAGATGAGGATGGAGGGTTTGGAACCGAATGTCTTTCATTATACAGCACTTATTGATGGATATGGTAAATTGGGTCAGATGGTCAAAGTTGAATGTCTTCTGCGTGAGATGCATTCAAAGAACGTACACCCAAATAAGATTACCTACACTGTGATGATTGGTGGGTATGCTAGAGATGGGAATGTAACGGAAGCTTCTAGGCTTCTAAATGAGATGAGGGAAAAAGGAATTGTTCCGGATAGTATCACATACAAAGAATTTATATACGGATATCTTAAGCAGGGAGGTGTGTTGGAAGCTTTTAAAGGTTCTGATGAAGAAAATTATGCAGCAATCATTGAAGGATGGAACAAACTCATTCAGTAA

Protein Analysis

838

Amino Acids

94.62

Weight (kDa)

8.58

Isoelectric Point (pI)

39.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 263 - 316 1.4e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 267 - 300 1.2e-11 PPR repeat
PPR_2 PF13041 271 - 318 8.8e-16 PPR repeat family
PPR PF01535 275 - 304 1.8e-07 PPR repeat
PPR_1 PF12854 303 - 335 1.8e-09 PPR repeat
PPR_2 PF13041 306 - 354 1.9e-15 PPR repeat family
PPR PF01535 309 - 338 4.8e-06 PPR repeat
PPR_long PF17177 325 - 441 4.9e-11 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 331 - 388 6.3e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 337 - 370 4.2e-06 PPR repeat
PPR_2 PF13041 376 - 425 3.9e-13 PPR repeat family
PPR_1 PF12854 407 - 439 6e-12 PPR repeat
PPR_2 PF13041 413 - 459 6.2e-11 PPR repeat family
PPR PF01535 414 - 444 9.8e-10 PPR repeat
PPR_2 PF13041 487 - 529 7.3e-08 PPR repeat family
PPR_1 PF12854 512 - 540 9e-06 PPR repeat
PPR_2 PF13041 517 - 564 1.4e-11 PPR repeat family
PPR_1 PF12854 547 - 580 8.5e-11 PPR repeat
PPR_2 PF13041 552 - 599 9.7e-20 PPR repeat family
PPR PF01535 554 - 584 2.1e-08 PPR repeat
PPR_long PF17177 558 - 701 5.2e-10 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 576 - 633 7.9e-07 Pentatricopeptide repeat domain
PPR_1 PF12854 582 - 612 5.5e-08 PPR repeat
PPR_2 PF13041 593 - 635 1.2e-13 PPR repeat family
PPR_1 PF12854 617 - 649 2.3e-10 PPR repeat
PPR PF01535 624 - 654 1.4e-07 PPR repeat
PPR_long PF17177 626 - 743 1.7e-08 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 646 - 701 3.5e-13 Pentatricopeptide repeat domain
PPR_1 PF12854 652 - 685 4e-09 PPR repeat
PPR_2 PF13041 656 - 703 7.9e-19 PPR repeat family
PPR PF01535 659 - 689 3.8e-08 PPR repeat
PPR_1 PF12854 687 - 720 5.1e-06 PPR repeat
PPR_2 PF13041 726 - 775 7.3e-14 PPR repeat family
PPR PF01535 730 - 759 7.3e-06 PPR repeat
PPR_3 PF13812 750 - 802 1.8e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 757 - 790 1.6e-09 PPR repeat
PPR PF01535 764 - 794 1.3e-08 PPR repeat
PPR_2 PF13041 765 - 808 1.7e-11 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 177
AccI GTMKAC 1 cut(s) 1241
AccII CGCG 1 cut(s) 96
AccIII TCCGGA 2 cut(s) 811, 2386
AciI CCGC 8 cut(s) 5, 118, 554, 905, 1295, 1692, 1788, 2013
AclI AACGTT 1 cut(s) 921
AclWI GGATC 2 cut(s) 336, 1212
AcoI YGGCCR 1 cut(s) 188
AcsI RAATTY 5 cut(s) 125, 314, 1931, 2064, 2408
AcuI CTGAAG 2 cut(s) 228, 1328
AfaI GTAC 2 cut(s) 510, 2277
AfiI CCNNNNNNNGG 4 cut(s) 219, 1448, 2128, 2149
AflII CTTAAG 2 cut(s) 1751, 2426
AflIII ACRYGT 1 cut(s) 1671
AgeI ACCGGT 1 cut(s) 511
AjnI CCWGG 2 cut(s) 1061, 1441
Alw26I GTCTC 6 cut(s) 79, 200, 419, 1233, 1307, 1481
AlwI GGATC 2 cut(s) 336, 1212
Aor13HI TCCGGA 2 cut(s) 811, 2386
AoxI GGCC 4 cut(s) 188, 873, 1818, 2028
ApeKI GCWGC 3 cut(s) 470, 1963, 2480
ApoI RAATTY 5 cut(s) 125, 314, 1931, 2064, 2408
ArsI GACNNNNNNTTYG 2 cut(s) 1211, 1243
AseI ATTAAT 1 cut(s) 840
AsiGI ACCGGT 1 cut(s) 511
Asp700I GAANNNNTTC 1 cut(s) 2247
AspLEI GCGC 1 cut(s) 98
AsuHPI GGTGA 4 cut(s) 60, 1091, 1894, 2061
AsuII TTCGAA 1 cut(s) 1217
BanII GRGCYC 1 cut(s) 1349
BarI GAAGNNNNNNTAC 2 cut(s) 694, 726
BauI CACGAG 1 cut(s) 1552
BbsI GAAGAC 1 cut(s) 2240
BbvI GCAGC 3 cut(s) 457, 1975, 2492
BceAI ACGGC 3 cut(s) 378, 860, 2106
BciT130I CCWGG 2 cut(s) 1063, 1443
BciVI GTATCC 1 cut(s) 1259
BclI TGATCA 1 cut(s) 495
BcoDI GTCTC 6 cut(s) 79, 200, 419, 1233, 1307, 1481
BfaI CTAG 7 cut(s) 266, 474, 746, 1508, 1706, 2322, 2349
BfmI CTRYAG 2 cut(s) 831, 2005
BfrI CTTAAG 2 cut(s) 1751, 2426
BfuAI ACCTGC 1 cut(s) 177
BfuI GTATCC 1 cut(s) 1259
BglII AGATCT 1 cut(s) 260
BisI GCNGC 5 cut(s) 6, 118, 471, 1964, 2481
BlsI GCNGC 5 cut(s) 7, 119, 472, 1965, 2482
Bme1390I CCNGG 2 cut(s) 1063, 1443
BmiI GGNNCC 3 cut(s) 1020, 1348, 2175
BmrFI CCNGG 2 cut(s) 1063, 1443
BmsI GCATC 5 cut(s) 442, 547, 1072, 1410, 2250
BpiI GAAGAC 1 cut(s) 2240
BplI GAGNNNNNCTC 4 cut(s) 76, 108, 197, 229
Bpu14I TTCGAA 1 cut(s) 1217
Bsa29I ATCGAT 1 cut(s) 2024
BsaBI GATNNNNATC 2 cut(s) 456, 2111
BsaI GGTCTC 1 cut(s) 1481
BsaJI CCNNGG 2 cut(s) 1062, 2031
BsaWI WCCGGW 3 cut(s) 511, 811, 2386
BsaXI ACNNNNNCTCC 2 cut(s) 849, 879
Bsc4I CCNNNNNNNGG 4 cut(s) 219, 1448, 2128, 2149
Bse118I RCCGGY 1 cut(s) 511
Bse3DI GCAATG 1 cut(s) 567
Bse8I GATNNNNATC 2 cut(s) 456, 2111
BseAI TCCGGA 2 cut(s) 811, 2386
BseBI CCWGG 2 cut(s) 1063, 1443
BseCI ATCGAT 1 cut(s) 2024
BseDI CCNNGG 2 cut(s) 1062, 2031
BseJI GATNNNNATC 2 cut(s) 456, 2111
BseLI CCNNNNNNNGG 4 cut(s) 219, 1448, 2128, 2149
BseMI GCAATG 1 cut(s) 567
BseMII CTCAG 2 cut(s) 324, 1410
BseRI GAGGAG 6 cut(s) 97, 884, 1829, 2132, 2144, 2165
BseX3I CGGCCG 1 cut(s) 188
BseXI GCAGC 3 cut(s) 457, 1975, 2492
BsgI GTGCAG 2 cut(s) 1396, 1982
Bsh1236I CGCG 1 cut(s) 96
Bsh1285I CGRYCG 1 cut(s) 191
BshFI GGCC 4 cut(s) 190, 875, 1820, 2030
BshTI ACCGGT 1 cut(s) 511
BshVI ATCGAT 1 cut(s) 2024
BsiEI CGRYCG 1 cut(s) 191
BsiSI CCGG 4 cut(s) 191, 512, 812, 2387
BslI CCNNNNNNNGG 4 cut(s) 219, 1448, 2128, 2149
BsmAI GTCTC 6 cut(s) 79, 200, 419, 1233, 1307, 1481
BsmBI CGTCTC 1 cut(s) 1307
BsmI GAATGC 1 cut(s) 2263
BsnI GGCC 4 cut(s) 190, 875, 1820, 2030
Bso31I GGTCTC 1 cut(s) 1481
Bsp119I TTCGAA 1 cut(s) 1217
Bsp1286I GDGCHC 1 cut(s) 1349
Bsp13I TCCGGA 2 cut(s) 811, 2386
Bsp143I GATC 5 cut(s) 217, 260, 341, 495, 1204
BspACI CCGC 8 cut(s) 5, 118, 554, 905, 1295, 1692, 1788, 2013
BspANI GGCC 4 cut(s) 190, 875, 1820, 2030
BspCNI CTCAG 2 cut(s) 325, 1409
BspDI ATCGAT 1 cut(s) 2024
BspEI TCCGGA 2 cut(s) 811, 2386
BspFNI CGCG 1 cut(s) 96
BspLI GGNNCC 3 cut(s) 1020, 1348, 2175
BspMI ACCTGC 1 cut(s) 177
BspPI GGATC 2 cut(s) 336, 1212
BspQI GCTCTTC 1 cut(s) 15
BspT104I TTCGAA 1 cut(s) 1217
BspTI CTTAAG 2 cut(s) 1751, 2426
BspTNI GGTCTC 1 cut(s) 1481
BsrDI GCAATG 1 cut(s) 567
BsrFI RCCGGY 1 cut(s) 511
BssAI RCCGGY 1 cut(s) 511
BssECI CCNNGG 2 cut(s) 1062, 2031
BssMI GATC 5 cut(s) 217, 260, 341, 495, 1204
BssSI CACGAG 1 cut(s) 1552
BssT1I CCWWGG 1 cut(s) 2031
Bst2BI CACGAG 1 cut(s) 1552
Bst2UI CCWGG 2 cut(s) 1063, 1443
Bst4CI ACNGT 9 cut(s) 177, 298, 642, 940, 1280, 1827, 1975, 2006, 2302
Bst6I CTCTTC 6 cut(s) 15, 37, 198, 251, 1914, 2150
BstAFI CTTAAG 2 cut(s) 1751, 2426
BstAPI GCANNNNNTGC 1 cut(s) 1292
BstBI TTCGAA 1 cut(s) 1217
BstC8I GCNNGC 3 cut(s) 100, 1790, 1856
BstDEI CTNAG 4 cut(s) 333, 714, 1068, 1396
BstENI CCTNNNNNAGG 1 cut(s) 2147
BstFNI CGCG 1 cut(s) 96
BstHHI GCGC 1 cut(s) 98
BstKTI GATC 5 cut(s) 220, 263, 344, 498, 1207
BstMAI GTCTC 6 cut(s) 79, 200, 419, 1233, 1307, 1481
BstMBI GATC 5 cut(s) 217, 260, 341, 495, 1204
BstMCI CGRYCG 1 cut(s) 191
BstMWI GCNNNNNNNGC 5 cut(s) 842, 911, 1292, 1374, 2260
BstNI CCWGG 2 cut(s) 1063, 1443
BstNSI RCATGY 1 cut(s) 1858
BstSCI CCNGG 2 cut(s) 1061, 1441
BstSFI CTRYAG 2 cut(s) 831, 2005
BstUI CGCG 1 cut(s) 96
BstV1I GCAGC 3 cut(s) 457, 1975, 2492
BstV2I GAAGAC 1 cut(s) 2240
BstX2I RGATCY 2 cut(s) 260, 1204
BstYI RGATCY 2 cut(s) 260, 1204
BstZI CGGCCG 1 cut(s) 188
Bsu15I ATCGAT 1 cut(s) 2024
BsuI GTATCC 1 cut(s) 1259
BsuRI GGCC 4 cut(s) 190, 875, 1820, 2030
BsuTUI ATCGAT 1 cut(s) 2024
BtsI GCAGTG 1 cut(s) 284
BtsIMutI CAGTG 3 cut(s) 182, 284, 2298
BveI ACCTGC 1 cut(s) 177
Cac8I GCNNGC 3 cut(s) 100, 1790, 1856
CfoI GCGC 1 cut(s) 98
Cfr10I RCCGGY 1 cut(s) 511
ClaI ATCGAT 1 cut(s) 2024
CseI GACGC 1 cut(s) 1289
Csp6I GTAC 2 cut(s) 509, 2276
CspAI ACCGGT 1 cut(s) 511
CviAII CATG 6 cut(s) 1015, 1210, 1435, 1487, 1577, 1855
CviQI GTAC 2 cut(s) 509, 2276
DdeI CTNAG 4 cut(s) 333, 714, 1068, 1396
DpnI GATC 5 cut(s) 219, 262, 343, 497, 1206
DpnII GATC 5 cut(s) 217, 260, 341, 495, 1204
DraI TTTAAA 2 cut(s) 991, 2455
EaeI YGGCCR 1 cut(s) 188
EagI CGGCCG 1 cut(s) 188
Eam1104I CTCTTC 6 cut(s) 15, 37, 198, 251, 1914, 2150
EarI CTCTTC 6 cut(s) 15, 37, 198, 251, 1914, 2150
EclXI CGGCCG 1 cut(s) 188
Eco130I CCWWGG 1 cut(s) 2031
Eco24I GRGCYC 1 cut(s) 1349
Eco31I GGTCTC 1 cut(s) 1481
Eco32I GATATC 1 cut(s) 2423
Eco52I CGGCCG 1 cut(s) 188
Eco57I CTGAAG 2 cut(s) 228, 1328
EcoNI CCTNNNNNAGG 1 cut(s) 2147
EcoRI GAATTC 1 cut(s) 314
EcoRII CCWGG 2 cut(s) 1061, 1441
EcoRV GATATC 1 cut(s) 2423
EcoT14I CCWWGG 1 cut(s) 2031
EcoT22I ATGCAT 1 cut(s) 2265
EcoT38I GRGCYC 1 cut(s) 1349
ErhI CCWWGG 1 cut(s) 2031
Esp3I CGTCTC 1 cut(s) 1307
FaeI CATG 6 cut(s) 1018, 1213, 1438, 1490, 1580, 1858
FatI CATG 6 cut(s) 1014, 1209, 1434, 1486, 1576, 1854
FauI CCCGC 2 cut(s) 898, 1781
FbaI TGATCA 1 cut(s) 495
FblI GTMKAC 1 cut(s) 1241
Fnu4HI GCNGC 5 cut(s) 6, 118, 471, 1964, 2481
FriOI GRGCYC 1 cut(s) 1349
Fsp4HI GCNGC 5 cut(s) 6, 118, 471, 1964, 2481
FspBI CTAG 7 cut(s) 266, 474, 746, 1508, 1706, 2322, 2349
GlaI GCGC 1 cut(s) 97
GluI GCNGC 5 cut(s) 6, 118, 471, 1964, 2481
HaeIII GGCC 4 cut(s) 190, 875, 1820, 2030
HapII CCGG 4 cut(s) 191, 512, 812, 2387
HgaI GACGC 1 cut(s) 1289
HhaI GCGC 1 cut(s) 98
Hin1II CATG 6 cut(s) 1018, 1213, 1438, 1490, 1580, 1858
Hin6I GCGC 1 cut(s) 96
HinP1I GCGC 1 cut(s) 96
HincII GTYRAC 2 cut(s) 738, 1242
HindII GTYRAC 2 cut(s) 738, 1242
HindIII AAGCTT 5 cut(s) 780, 1608, 1713, 2343, 2448
HinfI GANTC 7 cut(s) 392, 457, 487, 1394, 1438, 1581, 1618
HpaII CCGG 4 cut(s) 191, 512, 812, 2387
HphI GGTGA 4 cut(s) 60, 1091, 1894, 2061
Hpy166II GTNNAC 9 cut(s) 284, 738, 820, 828, 1242, 1549, 1844, 1981, 2278
Hpy8I GTNNAC 9 cut(s) 284, 738, 820, 828, 1242, 1549, 1844, 1981, 2278
Hpy99I CGWCG 2 cut(s) 1243, 1246
HpyAV CCTTC 7 cut(s) 594, 720, 960, 1093, 1303, 2010, 2486
HpyCH4III ACNGT 9 cut(s) 177, 298, 642, 940, 1280, 1827, 1975, 2006, 2302
HpyCH4IV ACGT 5 cut(s) 921, 1244, 1673, 1959, 2274
HpyF10VI GCNNNNNNNGC 5 cut(s) 842, 911, 1292, 1374, 2260
HpyF3I CTNAG 4 cut(s) 333, 714, 1068, 1396
HpySE526I ACGT 5 cut(s) 921, 1244, 1673, 1959, 2274
Hsp92II CATG 6 cut(s) 1018, 1213, 1438, 1490, 1580, 1858
HspAI GCGC 1 cut(s) 96
Kpn2I TCCGGA 2 cut(s) 811, 2386
Ksp22I TGATCA 1 cut(s) 495
Kzo9I GATC 5 cut(s) 217, 260, 341, 495, 1204
LguI GCTCTTC 1 cut(s) 15
LmnI GCTCC 2 cut(s) 1297, 1352
Lsp1109I GCAGC 3 cut(s) 457, 1975, 2492
LweI GCATC 5 cut(s) 442, 547, 1072, 1410, 2250
MaeI CTAG 7 cut(s) 266, 474, 746, 1508, 1706, 2322, 2349
MaeII ACGT 5 cut(s) 921, 1244, 1673, 1959, 2274
MaeIII GTNAC 2 cut(s) 925, 2335
MalI GATC 5 cut(s) 219, 262, 343, 497, 1206
MboI GATC 5 cut(s) 217, 260, 341, 495, 1204
MflI RGATCY 2 cut(s) 260, 1204
MhlI GDGCHC 1 cut(s) 1349
MlyI GAGTC 3 cut(s) 1388, 1447, 1575
MmeI TCCRAC 3 cut(s) 591, 1393, 2424
Mph1103I ATGCAT 1 cut(s) 2265
MroI TCCGGA 2 cut(s) 811, 2386
MroXI GAANNNNTTC 1 cut(s) 2247
MslI CAYNNNNRTG 1 cut(s) 2303
MspCI CTTAAG 2 cut(s) 1751, 2426
MspI CCGG 4 cut(s) 191, 512, 812, 2387
MspR9I CCNGG 2 cut(s) 1063, 1443
Mva1269I GAATGC 1 cut(s) 2263
MvaI CCWGG 2 cut(s) 1063, 1443
MvnI CGCG 1 cut(s) 96
MwoI GCNNNNNNNGC 5 cut(s) 842, 911, 1292, 1374, 2260
NdeII GATC 5 cut(s) 217, 260, 341, 495, 1204
NlaIII CATG 6 cut(s) 1018, 1213, 1438, 1490, 1580, 1858
NlaIV GGNNCC 3 cut(s) 1020, 1348, 2175
NmuCI GTSAC 1 cut(s) 925
NsiI ATGCAT 1 cut(s) 2265
NspI RCATGY 1 cut(s) 1858
NspV TTCGAA 1 cut(s) 1217
PaeI GCATGC 1 cut(s) 1858
PciSI GCTCTTC 1 cut(s) 15
PctI GAATGC 1 cut(s) 2263
PdmI GAANNNNTTC 1 cut(s) 2247
PfeI GAWTC 4 cut(s) 392, 457, 487, 1618
PinAI ACCGGT 1 cut(s) 511
PkrI GCNGC 5 cut(s) 7, 119, 472, 1965, 2482
PleI GAGTC 3 cut(s) 1388, 1446, 1575
PpsI GAGTC 3 cut(s) 1388, 1446, 1575
PshBI ATTAAT 1 cut(s) 840
Psp1406I AACGTT 1 cut(s) 921
Psp6I CCWGG 2 cut(s) 1061, 1441
PspGI CCWGG 2 cut(s) 1061, 1441
PspN4I GGNNCC 3 cut(s) 1020, 1348, 2175
PsrI GAACNNNNNNTAC 2 cut(s) 669, 701
PsuI RGATCY 2 cut(s) 260, 1204
RsaI GTAC 2 cut(s) 510, 2277
RsaNI GTAC 2 cut(s) 509, 2276
RseI CAYNNNNRTG 1 cut(s) 2303
SalI GTCGAC 1 cut(s) 1240
SapI GCTCTTC 1 cut(s) 15
SatI GCNGC 5 cut(s) 6, 118, 471, 1964, 2481
Sau3AI GATC 5 cut(s) 217, 260, 341, 495, 1204
SchI GAGTC 3 cut(s) 1388, 1447, 1575
ScrFI CCNGG 2 cut(s) 1063, 1443
SduI GDGCHC 1 cut(s) 1349
SfaNI GCATC 5 cut(s) 442, 547, 1072, 1410, 2250
SfcI CTRYAG 2 cut(s) 831, 2005
SfuI TTCGAA 1 cut(s) 1217
SgrDI CGTCGACG 1 cut(s) 1240
SmiMI CAYNNNNRTG 1 cut(s) 2303
SmlI CTYRAG 2 cut(s) 1751, 2426
SmoI CTYRAG 2 cut(s) 1751, 2426
SphI GCATGC 1 cut(s) 1858
SsiI CCGC 8 cut(s) 5, 118, 554, 905, 1295, 1692, 1788, 2013
SspMI CTAG 7 cut(s) 266, 474, 746, 1508, 1706, 2322, 2349
StyD4I CCNGG 2 cut(s) 1061, 1441
StyI CCWWGG 1 cut(s) 2031
TaaI ACNGT 9 cut(s) 177, 298, 642, 940, 1280, 1827, 1975, 2006, 2302
TaiI ACGT 5 cut(s) 924, 1247, 1676, 1962, 2277
TauI GCSGC 2 cut(s) 8, 120
TfiI GAWTC 4 cut(s) 392, 457, 487, 1618
TscAI CASTG 3 cut(s) 182, 284, 2305
TseFI GTSAC 1 cut(s) 925
TseI GCWGC 3 cut(s) 470, 1963, 2480
Tsp45I GTSAC 1 cut(s) 925
TspGWI ACGGA 5 cut(s) 407, 1861, 2030, 2354, 2433
TspRI CASTG 3 cut(s) 182, 284, 2305
Vha464I CTTAAG 2 cut(s) 1751, 2426
VspI ATTAAT 1 cut(s) 840
XagI CCTNNNNNAGG 1 cut(s) 2147
XapI RAATTY 5 cut(s) 125, 314, 1931, 2064, 2408
XbaI TCTAGA 1 cut(s) 265
XceI RCATGY 1 cut(s) 1858
XcmI CCANNNNNNNNNTGG 1 cut(s) 364
XmiI GTMKAC 1 cut(s) 1241
XmnI GAANNNNTTC 1 cut(s) 2247
XspI CTAG 7 cut(s) 266, 474, 746, 1508, 1706, 2322, 2349
Zsp2I ATGCAT 1 cut(s) 2265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.