Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003055

Physical Location & Seq

Genomic Coordinates Reverse (-)

32248573 .. 32250741

Gene Structure 2169 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ19219

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGACATTGACCTTCCAACGCCTCCACGACCCTCCCAAGCCGCCACTGTTACAGCCTCCGAGTCCACCACGGCCTCCCAATCCGGTTTTGCTCAACTGGGTATCTTCTATTCTCTCAAACCCATCTTTGGATTCTTCTAAATGTGAATCTCTCATGCCCCTTTTGTCCCCTCATGAATTTGATCAGTTATTCTACTCCATTAGGTCCAATGTGAACCCCAAAACAGTCCTTCATTTCTTTCATTTTGCTTCTCAATCCTTTAAGTTTCGGTTTACTGTTCGATCTTTCTGTGTTTTGGTTCATTTGCTCATTGCTTCAAATCTTGGGCCTCCTGCGAGGTTTCTTTTGATTCGTTTGATTGATGGGAATGTCCCAGTTTTGTGTGCTGACCCCAACAGCAAGCATATTGAGATAGCCGTGGCAATGTCGGAGTTGAACAATGCGTCCCAACCGGCTCTGGGGATTCAGGCATTGGATATATTAATTTATGCTTACTGTACCCAGTTCAAGAATTTGGGTTTTGGTTATGCTGTTGATGTGTTTGAGCATTTTTCGGATAAGGGTGTGCTTCCGTCTTTGAAGACTTGTAATGTTTTGCTGAGTTCTTTAGTGAAGGCTAACGAACTTAAGAAGAGCTATCATGTATTTGAAGTTATGACTCGAGGTGTTTGTCCTAATGTTTTCTTGTTTACTACTGCAATTAATGCGTTTTGCAAGGGAGGGAAGGTGGATGATGCAATAGCTGTGTTCTCAAAAATTGAGAGCATTGGTGTTGCTCCAAATGTGGTAACGTACAATAGCGTTATCCACGGGCTATGTAAGAGTAGAAGATTAGAGGCGGCTTTCCAGTTTAAGGAGAAGATGGTAAAGAATAATGTGAAGCCGAGTCTTATAACATACAGTGCAAATTGTGTTTTCAAGGAAATGCGTAGTTGGGGGTTTGTCCCGAATGAAGTTGTATATAAAACTCTCATTAATGGGTGTTGTACAATGGGAAATATTGGCGAGGCACTCGAGGTAAGGGATGATATAGTATCGAATGGGGTTACCCCTAATTCTGTTACTCTGAATTCGCTACTGCATGGATTTTGTAAAAGTAATCAATTTGAGCATGCTGAGCAATTTTTGGACAAGATGCTAGCCAGTGGTTTACCAGTCAGCCAAGTTGTTTCTTACTCAGTCATTGACTGGTTATGCATGAAATCTAGGTTTGATTCTGCACTAAGATTCACTACCGAAATGTTATTAAGAAACTTTAGGCCCAGTGATAGTTTGCTTACTACATTGTTTGTTGGGCTGTGCAAAGATGGGAAGAATTTAGAGGCAATCGAACTTTGGTTTAGGCTATCGGAGAAGGGGTTTGCAGCCAACACAGCGACCACAAATTCTCTAATCCATAGACTTTGTGAATTTGGTAGCATCAAAGAAGTTGTTAGGCTACTCAAGGCAATGCTTGAGAGGGGTTTGGCATTGGATAAGTTCTCATACAACACACTCATCTTAAGTTGTTGCAAGGAGGGAAGAGTGGCACAAGGTTTTAAGTTTAGAGAAGAGATGTCTAAGCAAGGAATTGATCCTGACATCAACACTTACAATATGCTATTGCATAGTCTATGTAGTATGGGCAAAGTGGACGATGCTGTTAAATTTTGGGTTGAATGCGAAAATCATGGTCTTGTGGCCAACGTTTATACATATGAGGTGATGATGGAAGGATACTGTAACTCTGGTAGAATCAAAGATGCTGAACTCCTGTTTAGTAAGTTGGTGACTAAGAAAGTGGAGCCAAATTCCGTTGTTTATAATACACTAATCAGTGCATATTGTATAGATGGGAATATGATTGGAGCTCTTGGCCTATTCCATGACATGAAAAACAATGGCATTCAACCAACTTATGCCACATATTTTTCTCTTATAAATAGGCTATGCAACATTGGCCATGTCGAGGATGCAAAAGAGCTCATTGATGAAATGAGGAGGAATGGTTTGGTGGCAAATGTCGCTTGTTATGCTGAAGTGATTTGTGGTTATTGTAAGCTAGGCCAAATGGATAAAGCGAGGAGTATTTTTCTAGAGATGTCCCATATAACATACAACCGAATGAAATTACATATACTGTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

708

Amino Acids

79.26

Weight (kDa)

8.36

Isoelectric Point (pI)

34.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	176 - 296	1.1e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	217 - 270	6.3e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	221 - 253	5.4e-10	PPR repeat
PPR_2	PF13041	225 - 274	2.9e-14	PPR repeat family
PPR_3	PF13812	249 - 302	1.1e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	257 - 289	2.3e-11	PPR repeat
PPR_2	PF13041	260 - 301	2.9e-14	PPR repeat family
PPR	PF01535	263 - 293	3.2e-06	PPR repeat
PPR_2	PF13041	302 - 329	1.6e-06	PPR repeat family
PPR_3	PF13812	305 - 361	9e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	313 - 343	1e-07	PPR repeat
PPR_2	PF13041	316 - 365	2e-13	PPR repeat family
PPR_1	PF12854	347 - 379	2.3e-09	PPR repeat
PPR_2	PF13041	351 - 387	2.1e-07	PPR repeat family
PPR	PF01535	354 - 384	8.3e-06	PPR repeat
PPR_2	PF13041	457 - 505	6.4e-10	PPR repeat family
PPR_1	PF12854	487 - 520	1.3e-07	PPR repeat
PPR_2	PF13041	493 - 539	1.6e-14	PPR repeat family
PPR_3	PF13812	517 - 570	3.1e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	523 - 552	3.3e-09	PPR repeat
PPR_2	PF13041	526 - 575	1.6e-12	PPR repeat family
PPR_3	PF13812	553 - 608	9.3e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	558 - 588	1.2e-06	PPR repeat
PPR_2	PF13041	562 - 599	7.3e-07	PPR repeat family
PPR_3	PF13812	585 - 641	7.6e-09	Pentatricopeptide repeat domain
TPR_24	PF23276	589 - 691	2.9e-09	Fungal tetratrico peptide repeats
PPR_1	PF12854	593 - 625	8.3e-08	PPR repeat
PPR_2	PF13041	596 - 645	6.8e-15	PPR repeat family
PPR	PF01535	599 - 629	2e-08	PPR repeat
PPR_3	PF13812	620 - 675	8.3e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	627 - 660	6.3e-07	PPR repeat
PPR_2	PF13041	635 - 671	6.6e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0003055)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19440 AT4G19440 AT4G19440 AT4G19440
fragaria_vesca	FvH4_4g10410 FvH4_4g10410 FvH4_4g10440 FvH4_5g24430 FvH4_5g24430 FvH4_5g24430 FvH4_5g24430
malus_domestica	MD06G1022200.v1.1
prunus_persica	Prupe.3G018200_v2.0.a1
pyrus_communis	pycom06g01610
rosa_chinensis	RchiOBHm_Chr4g0405931 RchiOBHm_Chr7g0214821 RchiOBHm_Chr7g0219861
rosa_laevigata	RLG00000002716 RLG00000008810
rosa_multiflora	Rmu_sc0002308.1_g000021 Rmu_sc0019702.1_g000004 Rmu_ssc0000087.1_g000071
rosa_roxburghii	Rroxscaffold_3G00244980 Rroxscaffold_5G00350670
rosa_rugosa	Rorug04G0064100 Rorug07G0147600 Rorug07G0147700 Rorug07G0147800
rosa_samantha	Rh4AG134900 Rh4BG130500 Rh4CG142300 Rh4DG129200 Rh7AG284500 Rh7BG275300 Rh7CG303700 Rh7DG287900
rosa_wichuraiana	Rw4G010980 Rw7G024260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	893, 1803, 1919
AciI	CCGC	2 cut(s)	41, 839
AclI	AACGTT	1 cut(s)	1686
AclWI	GGATC	1 cut(s)	1568
AcoI	YGGCCR	2 cut(s)	1680, 1939
AcsI	RAATTY	8 cut(s)	176, 511, 1069, 1315, 1384, 1409, 1646, 1789
AcuI	CTGAAG	1 cut(s)	2037
AfaI	GTAC	3 cut(s)	499, 794, 988
AfiI	CCNNNNNNNGG	4 cut(s)	127, 458, 853, 1948
AflII	CTTAAG	2 cut(s)	626, 1501
AgsI	TTSAA	8 cut(s)	318, 436, 508, 580, 650, 919, 1658, 1889
AloI	GAACNNNNNNTCC	2 cut(s)	428, 460
AluBI	AGCT	5 cut(s)	636, 743, 1850, 1963, 2041
AluI	AGCT	5 cut(s)	636, 743, 1850, 1963, 2041
Alw21I	GWGCWC	2 cut(s)	1852, 1965
AlwI	GGATC	1 cut(s)	1568
Ama87I	CYCGRG	2 cut(s)	660, 1013
AoxI	GGCC	7 cut(s)	71, 326, 1259, 1680, 1855, 1939, 2044
ApeKI	GCWGC	1 cut(s)	1364
ApoI	RAATTY	8 cut(s)	176, 511, 1069, 1315, 1384, 1409, 1646, 1789
AseI	ATTAAT	3 cut(s)	482, 702, 975
AspS9I	GGNCC	3 cut(s)	204, 326, 1260
AsuHPI	GGTGA	2 cut(s)	1714, 1780
AsuNHI	GCTAGC	1 cut(s)	1138
AvaI	CYCGRG	2 cut(s)	660, 1013
AvaII	GGWCC	1 cut(s)	204
BalI	TGGCCA	2 cut(s)	1682, 1941
BanII	GRGCYC	2 cut(s)	1852, 1965
BbsI	GAAGAC	1 cut(s)	587
Bbv12I	GWGCWC	2 cut(s)	1852, 1965
BbvI	GCAGC	1 cut(s)	1376
BccI	CCATC	6 cut(s)	130, 356, 856, 1301, 1702, 1826
BceAI	ACGGC	2 cut(s)	86, 401
BciVI	GTATCC	1 cut(s)	1709
BclI	TGATCA	1 cut(s)	181
BfaI	CTAG	4 cut(s)	1139, 1206, 2042, 2075
BfrI	CTTAAG	2 cut(s)	626, 1501
BfuI	GTATCC	1 cut(s)	1709
BisI	GCNGC	3 cut(s)	41, 840, 1365
BlpI	GCTNAGC	1 cut(s)	1116
BlsI	GCNGC	3 cut(s)	42, 841, 1366
Bme18I	GGWCC	1 cut(s)	204
BmeT110I	CYCGRG	2 cut(s)	660, 1013
BmgT120I	GGNCC	3 cut(s)	204, 326, 1260
BmiI	GGNNCC	1 cut(s)	1785
BmrI	ACTGGG	4 cut(s)	106, 368, 496, 1257
BmsI	GCATC	6 cut(s)	724, 1125, 1428, 1627, 1732, 1942
BmtI	GCTAGC	1 cut(s)	1142
BmuI	ACTGGG	4 cut(s)	106, 368, 496, 1257
BpiI	GAAGAC	1 cut(s)	587
Bpu1102I	GCTNAGC	1 cut(s)	1116
BpuEI	CTTGAG	2 cut(s)	1427, 1475
BsaJI	CCNNGG	3 cut(s)	68, 417, 808
BsaWI	WCCGGW	1 cut(s)	82
BsaXI	ACNNNNNCTCC	6 cut(s)	711, 741, 1343, 1373, 1972, 2002
Bsc4I	CCNNNNNNNGG	4 cut(s)	127, 458, 853, 1948
Bse118I	RCCGGY	1 cut(s)	451
Bse1I	ACTGG	8 cut(s)	101, 374, 502, 847, 1143, 1154, 1193, 1263
Bse3DI	GCAATG	3 cut(s)	309, 429, 1455
BseDI	CCNNGG	3 cut(s)	68, 417, 808
BseGI	GGATG	3 cut(s)	736, 1030, 1957
BseLI	CCNNNNNNNGG	4 cut(s)	127, 458, 853, 1948
BseMI	GCAATG	3 cut(s)	309, 429, 1455
BseMII	CTCAG	3 cut(s)	590, 1107, 1191
BseNI	ACTGG	8 cut(s)	101, 374, 502, 847, 1143, 1154, 1193, 1263
BseRI	GAGGAG	2 cut(s)	1993, 2077
BseXI	GCAGC	1 cut(s)	1376
BsgI	GTGCAG	1 cut(s)	1203
BshFI	GGCC	7 cut(s)	73, 328, 1261, 1682, 1857, 1941, 2046
BsiHKAI	GWGCWC	2 cut(s)	1852, 1965
BsiHKCI	CYCGRG	2 cut(s)	660, 1013
BsiSI	CCGG	2 cut(s)	83, 452
BslFI	GGGAC	5 cut(s)	151, 356, 430, 929, 2068
BslI	CCNNNNNNNGG	4 cut(s)	127, 458, 853, 1948
BsmFI	GGGAC	5 cut(s)	151, 356, 430, 929, 2068
BsmI	GAATGC	2 cut(s)	1664, 1884
BsnI	GGCC	7 cut(s)	73, 328, 1261, 1682, 1857, 1941, 2046
BsoBI	CYCGRG	2 cut(s)	660, 1013
Bsp1286I	GDGCHC	2 cut(s)	1852, 1965
Bsp1407I	TGTACA	1 cut(s)	986
Bsp143I	GATC	3 cut(s)	181, 281, 1573
Bsp1720I	GCTNAGC	1 cut(s)	1116
BspACI	CCGC	2 cut(s)	41, 839
BspANI	GGCC	7 cut(s)	73, 328, 1261, 1682, 1857, 1941, 2046
BspCNI	CTCAG	3 cut(s)	591, 1108, 1190
BspHI	TCATGA	2 cut(s)	172, 2123
BspLI	GGNNCC	1 cut(s)	1785
BspOI	GCTAGC	1 cut(s)	1142
BspPI	GGATC	1 cut(s)	1568
BspQI	GCTCTTC	1 cut(s)	626
BspTI	CTTAAG	2 cut(s)	626, 1501
BsrDI	GCAATG	3 cut(s)	309, 429, 1455
BsrFI	RCCGGY	1 cut(s)	451
BsrGI	TGTACA	1 cut(s)	986
BsrI	ACTGG	8 cut(s)	101, 374, 502, 847, 1143, 1154, 1193, 1263
BssAI	RCCGGY	1 cut(s)	451
BssECI	CCNNGG	3 cut(s)	68, 417, 808
BssMI	GATC	3 cut(s)	181, 281, 1573
Bst4CI	ACNGT	7 cut(s)	48, 226, 277, 497, 902, 1721, 2121
Bst6I	CTCTTC	3 cut(s)	626, 1516, 1545
BstAFI	CTTAAG	2 cut(s)	626, 1501
BstAPI	GCANNNNNTGC	1 cut(s)	704
BstAUI	TGTACA	1 cut(s)	986
BstC8I	GCNNGC	3 cut(s)	401, 1113, 1140
BstDEI	CTNAG	6 cut(s)	599, 1116, 1177, 1223, 1560, 1773
BstDSI	CCRYGG	3 cut(s)	68, 417, 808
BstEII	GGTNACC	1 cut(s)	1045
BstF5I	GGATG	3 cut(s)	736, 1030, 1957
BstKTI	GATC	3 cut(s)	184, 284, 1576
BstMBI	GATC	3 cut(s)	181, 281, 1573
BstMWI	GCNNNNNNNGC	6 cut(s)	704, 1117, 1373, 1938, 2003, 2012
BstNSI	RCATGY	1 cut(s)	1115
BstPI	GGTNACC	1 cut(s)	1045
BstV1I	GCAGC	1 cut(s)	1376
BstV2I	GAAGAC	1 cut(s)	587
BsuI	GTATCC	1 cut(s)	1709
BsuRI	GGCC	7 cut(s)	73, 328, 1261, 1682, 1857, 1941, 2046
BtgI	CCRYGG	3 cut(s)	68, 417, 808
BtsCI	GGATG	3 cut(s)	736, 1030, 1957
BtsIMutI	CAGTG	5 cut(s)	44, 907, 1150, 1270, 1822
Cac8I	GCNNGC	3 cut(s)	401, 1113, 1140
CciI	TCATGA	2 cut(s)	172, 2123
Cfr10I	RCCGGY	1 cut(s)	451
Cfr13I	GGNCC	3 cut(s)	204, 326, 1260
CseI	GACGC	1 cut(s)	432
Csp6I	GTAC	3 cut(s)	498, 793, 987
CviQI	GTAC	3 cut(s)	498, 793, 987
DdeI	CTNAG	6 cut(s)	599, 1116, 1177, 1223, 1560, 1773
DpnI	GATC	3 cut(s)	183, 283, 1575
DpnII	GATC	3 cut(s)	181, 281, 1573
EaeI	YGGCCR	2 cut(s)	1680, 1939
Eam1104I	CTCTTC	3 cut(s)	626, 1516, 1545
EarI	CTCTTC	3 cut(s)	626, 1516, 1545
Ecl136II	GAGCTC	2 cut(s)	1850, 1963
Eco24I	GRGCYC	2 cut(s)	1852, 1965
Eco47I	GGWCC	1 cut(s)	204
Eco53kI	GAGCTC	2 cut(s)	1850, 1963
Eco57I	CTGAAG	1 cut(s)	2037
Eco88I	CYCGRG	2 cut(s)	660, 1013
Eco91I	GGTNACC	1 cut(s)	1045
EcoICRI	GAGCTC	2 cut(s)	1850, 1963
EcoO65I	GGTNACC	1 cut(s)	1045
EcoRI	GAATTC	1 cut(s)	1069
EcoT22I	ATGCAT	1 cut(s)	1199
EcoT38I	GRGCYC	2 cut(s)	1852, 1965
FaqI	GGGAC	5 cut(s)	151, 356, 430, 929, 2068
FauNDI	CATATG	1 cut(s)	1696
FbaI	TGATCA	1 cut(s)	181
Fnu4HI	GCNGC	3 cut(s)	41, 840, 1365
FokI	GGATG	3 cut(s)	743, 1037, 1964
FriOI	GRGCYC	2 cut(s)	1852, 1965
Fsp4HI	GCNGC	3 cut(s)	41, 840, 1365
FspBI	CTAG	4 cut(s)	1139, 1206, 2042, 2075
GluI	GCNGC	3 cut(s)	41, 840, 1365
HaeIII	GGCC	7 cut(s)	73, 328, 1261, 1682, 1857, 1941, 2046
HapII	CCGG	2 cut(s)	83, 452
HgaI	GACGC	1 cut(s)	432
HpaII	CCGG	2 cut(s)	83, 452
HphI	GGTGA	2 cut(s)	1714, 1780
Hpy166II	GTNNAC	6 cut(s)	65, 214, 273, 690, 1151, 1633
Hpy188I	TCNGA	5 cut(s)	60, 430, 556, 1068, 1351
Hpy188III	TCNNGA	6 cut(s)	173, 508, 946, 1577, 2075, 2124
Hpy8I	GTNNAC	6 cut(s)	65, 214, 273, 690, 1151, 1633
HpyAV	CCTTC	6 cut(s)	22, 239, 607, 718, 1348, 1706
HpyCH4III	ACNGT	7 cut(s)	48, 226, 277, 497, 902, 1721, 2121
HpyCH4IV	ACGT	2 cut(s)	791, 1686
HpyF10VI	GCNNNNNNNGC	6 cut(s)	704, 1117, 1373, 1938, 2003, 2012
HpyF3I	CTNAG	6 cut(s)	599, 1116, 1177, 1223, 1560, 1773
HpySE526I	ACGT	2 cut(s)	791, 1686
Ksp22I	TGATCA	1 cut(s)	181
Kzo9I	GATC	3 cut(s)	181, 281, 1573
LguI	GCTCTTC	1 cut(s)	626
LmnI	GCTCC	3 cut(s)	781, 1783, 1847
Lsp1109I	GCAGC	1 cut(s)	1376
LweI	GCATC	6 cut(s)	724, 1125, 1428, 1627, 1732, 1942
MaeI	CTAG	4 cut(s)	1139, 1206, 2042, 2075
MaeII	ACGT	2 cut(s)	791, 1686
MaeIII	GTNAC	6 cut(s)	48, 787, 1045, 1060, 1721, 1768
MalI	GATC	3 cut(s)	183, 283, 1575
MboI	GATC	3 cut(s)	181, 281, 1573
MboII	GAAGA	9 cut(s)	96, 126, 592, 643, 840, 871, 1324, 1533, 1562
MhlI	GDGCHC	2 cut(s)	1852, 1965
MlsI	TGGCCA	2 cut(s)	1682, 1941
MluNI	TGGCCA	2 cut(s)	1682, 1941
MlyI	GAGTC	3 cut(s)	70, 652, 895
MmeI	TCCRAC	2 cut(s)	40, 408
Mox20I	TGGCCA	2 cut(s)	1682, 1941
Mph1103I	ATGCAT	1 cut(s)	1199
MscI	TGGCCA	2 cut(s)	1682, 1941
Msp20I	TGGCCA	2 cut(s)	1682, 1941
MspCI	CTTAAG	2 cut(s)	626, 1501
MspI	CCGG	2 cut(s)	83, 452
Mva1269I	GAATGC	2 cut(s)	1664, 1884
MwoI	GCNNNNNNNGC	6 cut(s)	704, 1117, 1373, 1938, 2003, 2012
NdeI	CATATG	1 cut(s)	1696
NdeII	GATC	3 cut(s)	181, 281, 1573
NheI	GCTAGC	1 cut(s)	1138
NlaIV	GGNNCC	1 cut(s)	1785
NmeAIII	GCCGAG	1 cut(s)	909
NmuCI	GTSAC	1 cut(s)	1768
NsiI	ATGCAT	1 cut(s)	1199
NspI	RCATGY	1 cut(s)	1115
PaeI	GCATGC	1 cut(s)	1115
PaeR7I	CTCGAG	2 cut(s)	660, 1013
PagI	TCATGA	2 cut(s)	172, 2123
PciSI	GCTCTTC	1 cut(s)	626
PctI	GAATGC	2 cut(s)	1664, 1884
PfeI	GAWTC	7 cut(s)	131, 146, 349, 463, 1214, 1227, 1734
PkrI	GCNGC	3 cut(s)	42, 841, 1366
PleI	GAGTC	3 cut(s)	69, 652, 894
PpsI	GAGTC	3 cut(s)	69, 652, 894
PshBI	ATTAAT	3 cut(s)	482, 702, 975
PsiI	TTATAA	3 cut(s)	893, 1803, 1919
Psp124BI	GAGCTC	2 cut(s)	1852, 1965
Psp1406I	AACGTT	1 cut(s)	1686
PspEI	GGTNACC	1 cut(s)	1045
PspN4I	GGNNCC	1 cut(s)	1785
PspPI	GGNCC	3 cut(s)	204, 326, 1260
PspXI	VCTCGAGB	2 cut(s)	660, 1013
RsaI	GTAC	3 cut(s)	499, 794, 988
RsaNI	GTAC	3 cut(s)	498, 793, 987
SacI	GAGCTC	2 cut(s)	1852, 1965
SapI	GCTCTTC	1 cut(s)	626
SatI	GCNGC	3 cut(s)	41, 840, 1365
Sau3AI	GATC	3 cut(s)	181, 281, 1573
Sau96I	GGNCC	3 cut(s)	204, 326, 1260
SchI	GAGTC	3 cut(s)	70, 652, 895
SduI	GDGCHC	2 cut(s)	1852, 1965
SfaNI	GCATC	6 cut(s)	724, 1125, 1428, 1627, 1732, 1942
Sfr274I	CTCGAG	2 cut(s)	660, 1013
SinI	GGWCC	1 cut(s)	204
SlaI	CTCGAG	2 cut(s)	660, 1013
SmlI	CTYRAG	6 cut(s)	626, 660, 1013, 1442, 1454, 1501
SmoI	CTYRAG	6 cut(s)	626, 660, 1013, 1442, 1454, 1501
SphI	GCATGC	1 cut(s)	1115
SsiI	CCGC	2 cut(s)	41, 839
SspI	AATATT	1 cut(s)	1000
SspMI	CTAG	4 cut(s)	1139, 1206, 2042, 2075
SstI	GAGCTC	2 cut(s)	1852, 1965
TaaI	ACNGT	7 cut(s)	48, 226, 277, 497, 902, 1721, 2121
TaiI	ACGT	2 cut(s)	794, 1689
TaqI	TCGA	6 cut(s)	280, 661, 1014, 1037, 1329, 1947
TatI	WGTACW	1 cut(s)	986
TauI	GCSGC	2 cut(s)	43, 842
TfiI	GAWTC	7 cut(s)	131, 146, 349, 463, 1214, 1227, 1734
TscAI	CASTG	5 cut(s)	51, 907, 1150, 1270, 1822
TseFI	GTSAC	1 cut(s)	1768
TseI	GCWGC	1 cut(s)	1364
Tsp45I	GTSAC	1 cut(s)	1768
TspDTI	ATGAA	9 cut(s)	189, 221, 230, 290, 966, 1214, 1886, 1986, 2120
TspGWI	ACGGA	2 cut(s)	561, 1783
TspRI	CASTG	5 cut(s)	51, 907, 1150, 1270, 1822
Vha464I	CTTAAG	2 cut(s)	626, 1501
VpaK11BI	GGWCC	1 cut(s)	204
VspI	ATTAAT	3 cut(s)	482, 702, 975
XapI	RAATTY	8 cut(s)	176, 511, 1069, 1315, 1384, 1409, 1646, 1789
XbaI	TCTAGA	1 cut(s)	2074
XceI	RCATGY	1 cut(s)	1115
XhoI	CTCGAG	2 cut(s)	660, 1013
XspI	CTAG	4 cut(s)	1139, 1206, 2042, 2075
Zsp2I	ATGCAT	1 cut(s)	1199

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.