Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0003055

Physical Location & Seq

Genomic Coordinates Reverse (-)

25583480 .. 25588473

Gene Structure 4994 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG275300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2349 bp

ATGCAATTCTCAATGGATTTGAGAAGGCTTCCGATCTCCAAACCCGCTTCTCTCTTCTACCCAATCACACGCCCCTTAACGGGCGTGACATTCACCTTCCAACGCCGCCACGACCCTCCTCAGCCGCCGCCGTTACAGCCTCCGAGTCCACCACAGCCTCCCAATCCGGGTTTGCTCAACTGGGTATCTTCTATTCTCTCAAACCCATCTTTGGATTCTTCTAAATGTGAATCTCTCATGCCCCTTTTGTCCCCTCATGAATTTGACCAGTTATTCTACTCCATTAGGTCCAATGTGAACCCCAAAACAGCTCTTCATTTCTTTCATTTTGCTTCTCAATCTTTTAAGTTTCGGTTTACTGTTCGATCCTTCTGTGTTTTGGTTCATTTGCTCATTGCTTCAAATCTTGGGCCTCCTGCGAGGTTGCTTTTGATTCGTTTGATTGATGGGAATGTCCCAGTTTTGTGTGCTGACCCCAACAGCAAGCATATTGAGATAGCCGGCGCAATGTCGGAGTTGAACAATGTGTCCCAACCGGCTCTGGGGATTCAGGCATTGGATATGTTAATTCATGTTTACTGTACCCAGTTCAAGAATTTGGGTTTTGGTTGTGCTGTTGATGTGTTTGAGCATTTTTCGGATAAGGGTGTGTTTCCGTCTTTGAAGACTTGTAATGTTTTGCTGAGTTCTTTAGTGAAGGCTAACGAACTTGAGAAGAGCTATCATGTATTTGAAGTTATGACTCGAGGTGTTTGTCCTGATGTTTTCTTGTTTACTACTGCAATTAATGCGTTTTGCAAGGGAGGGAAGGTGGATGATGCAATAGCTGTGTTCTCAAAAATGGAGAGCATTGGTGTTGCTCCAAATGTGGTTACTTACAATAGCGTTATCCACGGGCTATGTAAGAGTAGAAGATTAGAGGCGGCTTTCCAGTTTAAGGAGAAGATGGTAAAGAATAATGTGAAGCCGAGTCTTATAACATACAGTGTGCTCATTAATGGTTTGATTAAGCTGGAGAAGTTTTATGAGGCAAATTGTGTTTTCAAGGAAATGCGTAGTTGGGGGTTTGTCCCGAATGAGGTTGTATATAACACTCTGATTAATGGGTATTGTACAATGGGAAATATTGGCGAGGCACTCAAGATAAGGGATGATATGGTATCGAATGGGGTTACCCCTAATTCTGTTACTCTGAATTCGCTACTGCATGGATTTTGTAAAAGTAATCAATTTGAGCATGCTGAGCAATTCTTGGACAAGATGCTAGCCAGTGGTTTACCAGTCAACCAAGTTGTTTCTTACTCAGTCATTGACTGGTTATGCTTGAAATCTAGGTTTGATTCTGCACTAAAATTCACTACTGAAATGTTATTAAGAAACTTTAGGCCCAGTGATAGTTTGCTTACTACATTGTTTGTTGGGCTCTGCAAAGATGGGAAGAATTTAGAGACAATCGAACTTTGGTTTAGGCTATCGGAGAAGGGGTTTGCAGCCAACACAGCGATCACAAATGCTCTAATCCATGGACTTTGTGAATCTAGTAGCATCGAAGAGGTTGTTAGGCTACTCAAGGCAATGCTTGAGAGGGGTTTGGCATTGGATAAGTTCTCATACAACACACTCATCTTAAGTTGTTGCAAGGAGGGAAGAGTGGCAGAAGGTTTTAAGCTTAGAGAAGAGATGTCTAAGCAAGGAATTGATCCTGACATCAACACTTACAATATGCTACTGCATAGTCTATGTAGTATGGGCAAAGTGGACGATGCTGTTAAACTTTGGGTTGAATGCGAAAATCATGGTCTTGTGGCCAACGTTTATACATATGAGGTGATGATAGAAGGGTACTGTAACTCTGGTAGAATCAAAGATGCTGAACTCCTGTTTAGTAAGTTGGTGACTAAGAAAGTGGAGCCAAATTCCGTTGTTTATAATACACTAATCAGTGCATATTGTATAGATGGGAATATGATTGGAGCTCTTGGCCTATTCCATGACATGAAAAACAAGGGCATTCAACCAACTTATGCCACATATTTTTCTCTTATAAATAGGCTATGCAATATTGGCCATGTCGAGGATGCAAAAGAGTTCATTGATGAAATGAGGAGGAATGGTTTGGTGCCAAATGTCGCTTGTTATGCTGAAGTGATATGTGGTTATTGTAAGCTAGGCCAAATGGATAAAGCGAGGAGCATTTTTCAGGAGATGTCCTCATATAACATACAGCCGAATGAAATTACATATACTGTCATGATTGATGGGTATTGTAAGCTAGGCAACATGGAAGAAAAAAATATACTTCAATGTGAGATGGCAAAAAAGGGAATTGTCCCAGATGCAGTCACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

782

Amino Acids

87.44

Weight (kDa)

7.18

Isoelectric Point (pI)

38.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	204 - 332	5.5e-09	Pentacotripeptide-repeat region of PRORP
TPR_24	PF23276	244 - 350	9e-06	Fungal tetratrico peptide repeats
PPR_3	PF13812	245 - 298	6.5e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	249 - 282	1.4e-11	PPR repeat
PPR_2	PF13041	253 - 302	6e-16	PPR repeat family
PPR_1	PF12854	285 - 317	2.5e-11	PPR repeat
PPR_2	PF13041	288 - 337	2.2e-18	PPR repeat family
PPR	PF01535	291 - 321	3.6e-06	PPR repeat
PPR_3	PF13812	313 - 370	4.4e-07	Pentatricopeptide repeat domain
PPR_3	PF13812	347 - 403	1.8e-07	Pentatricopeptide repeat domain
TPR_24	PF23276	347 - 430	5.3e-06	Fungal tetratrico peptide repeats
PPR_1	PF12854	355 - 387	6.7e-11	PPR repeat
PPR_2	PF13041	358 - 407	1.3e-17	PPR repeat family
PPR	PF01535	361 - 391	1.8e-07	PPR repeat
PPR_1	PF12854	389 - 421	2.6e-09	PPR repeat
PPR_2	PF13041	393 - 431	5.2e-08	PPR repeat family
PPR	PF01535	396 - 426	9.4e-06	PPR repeat
PPR_2	PF13041	499 - 547	3.3e-10	PPR repeat family
PPR_long	PF17177	514 - 601	7.3e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	521 - 578	6.4e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	529 - 562	1.4e-08	PPR repeat
PPR_2	PF13041	535 - 581	3.7e-15	PPR repeat family
PPR	PF01535	536 - 566	4.2e-06	PPR repeat
PPR_1	PF12854	565 - 594	1.8e-09	PPR repeat
PPR_2	PF13041	568 - 617	2.3e-13	PPR repeat family
PPR_3	PF13812	593 - 650	2.2e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	600 - 630	6.7e-08	PPR repeat
PPR_2	PF13041	604 - 643	1.6e-07	PPR repeat family
PPR_long	PF17177	627 - 760	1.1e-10	Pentacotripeptide-repeat region of PRORP
TPR_24	PF23276	631 - 735	5.7e-09	Fungal tetratrico peptide repeats
PPR_1	PF12854	635 - 667	9.3e-08	PPR repeat
PPR_2	PF13041	638 - 687	4.3e-15	PPR repeat family
PPR	PF01535	641 - 671	1.7e-08	PPR repeat
PPR_3	PF13812	662 - 717	3.7e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	669 - 702	9.8e-07	PPR repeat
PPR_2	PF13041	674 - 713	2.8e-07	PPR repeat family
PPR_1	PF12854	704 - 737	8.6e-07	PPR repeat
PPR_2	PF13041	708 - 757	4e-17	PPR repeat family
PPR_1	PF12854	740 - 763	1.1e-06	PPR repeat
PPR_2	PF13041	747 - 782	4.6e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0003055)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19440 AT4G19440 AT4G19440 AT4G19440
fragaria_vesca	FvH4_4g10410 FvH4_4g10410 FvH4_4g10440 FvH4_5g24430 FvH4_5g24430 FvH4_5g24430 FvH4_5g24430
malus_domestica	MD06G1022200.v1.1
prunus_persica	Prupe.3G018200_v2.0.a1
pyrus_communis	pycom06g01610
rosa_chinensis	RchiOBHm_Chr4g0405931 RchiOBHm_Chr7g0214821 RchiOBHm_Chr7g0219861
rosa_laevigata	RLG00000002716 RLG00000008810
rosa_multiflora	Rmu_sc0002308.1_g000021 Rmu_sc0019702.1_g000004 Rmu_ssc0000087.1_g000071
rosa_roxburghii	Rroxscaffold_3G00244980 Rroxscaffold_5G00350670
rosa_rugosa	Rorug04G0064100 Rorug07G0147600 Rorug07G0147700 Rorug07G0147800
rosa_samantha	Rh4AG134900 Rh4BG130500 Rh4CG142300 Rh4DG129200 Rh7AG284500 Rh7BG275300 Rh7CG303700 Rh7DG287900
rosa_wichuraiana	Rw4G010980 Rw7G024260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	977, 1929, 2045
AccB1I	GGYRCC	1 cut(s)	2119
AciI	CCGC	5 cut(s)	45, 106, 125, 128, 923
AclI	AACGTT	1 cut(s)	1812
AclWI	GGATC	2 cut(s)	360, 1694
AcoI	YGGCCR	2 cut(s)	1806, 2065
AcsI	RAATTY	6 cut(s)	260, 595, 1195, 1352, 1441, 1915
AcuI	CTGAAG	1 cut(s)	2163
AfaI	GTAC	3 cut(s)	583, 1114, 1844
AfiI	CCNNNNNNNGG	8 cut(s)	79, 80, 167, 211, 542, 937, 1078, 2074
AflII	CTTAAG	1 cut(s)	1627
AloI	GAACNNNNNNTCC	2 cut(s)	512, 544
AluBI	AGCT	8 cut(s)	311, 720, 827, 1012, 1669, 1976, 2167, 2272
AluI	AGCT	8 cut(s)	311, 720, 827, 1012, 1669, 1976, 2167, 2272
Alw21I	GWGCWC	2 cut(s)	993, 1978
Alw26I	GTCTC	1 cut(s)	1442
AlwI	GGATC	2 cut(s)	360, 1694
Ama87I	CYCGRG	1 cut(s)	744
AoxI	GGCC	6 cut(s)	410, 1385, 1806, 1981, 2065, 2170
ApeKI	GCWGC	1 cut(s)	1490
ApoI	RAATTY	6 cut(s)	260, 595, 1195, 1352, 1441, 1915
AseI	ATTAAT	3 cut(s)	786, 996, 1101
AspLEI	GCGC	1 cut(s)	506
AspS9I	GGNCC	3 cut(s)	288, 410, 1386
AsuC2I	CCSGG	1 cut(s)	168
AsuHPI	GGTGA	3 cut(s)	85, 1840, 1906
AsuNHI	GCTAGC	1 cut(s)	1264
AvaI	CYCGRG	1 cut(s)	744
AvaII	GGWCC	1 cut(s)	288
BalI	TGGCCA	2 cut(s)	1808, 2067
BanI	GGYRCC	1 cut(s)	2119
BanII	GRGCYC	2 cut(s)	1425, 1978
BbsI	GAAGAC	1 cut(s)	671
Bbv12I	GWGCWC	2 cut(s)	993, 1978
BbvCI	CCTCAGC	1 cut(s)	120
BbvI	GCAGC	1 cut(s)	1502
BccI	CCATC	7 cut(s)	214, 440, 940, 1427, 1952, 2252, 2305
BceAI	ACGGC	1 cut(s)	115
BcnI	CCSGG	1 cut(s)	168
BcoDI	GTCTC	1 cut(s)	1442
BfaI	CTAG	5 cut(s)	1265, 1332, 1539, 2168, 2273
BfrI	CTTAAG	1 cut(s)	1627
BisI	GCNGC	5 cut(s)	106, 125, 128, 924, 1491
BlpI	GCTNAGC	1 cut(s)	1242
BlsI	GCNGC	5 cut(s)	107, 126, 129, 925, 1492
Bme1390I	CCNGG	1 cut(s)	168
Bme18I	GGWCC	1 cut(s)	288
BmeT110I	CYCGRG	1 cut(s)	744
BmgT120I	GGNCC	3 cut(s)	288, 410, 1386
BmiI	GGNNCC	2 cut(s)	1911, 2121
BmrFI	CCNGG	1 cut(s)	168
BmrI	ACTGGG	4 cut(s)	190, 452, 580, 1383
BmsI	GCATC	7 cut(s)	808, 1251, 1554, 1753, 1858, 2068, 2326
BmtI	GCTAGC	1 cut(s)	1268
BmuI	ACTGGG	4 cut(s)	190, 452, 580, 1383
BpiI	GAAGAC	1 cut(s)	671
BplI	GAGNNNNNCTC	2 cut(s)	2195, 2227
BpmI	CTGGAG	1 cut(s)	1034
Bpu10I	CCTNAGC	1 cut(s)	120
Bpu1102I	GCTNAGC	1 cut(s)	1242
BpuEI	CTTGAG	4 cut(s)	731, 1124, 1553, 1601
BpuMI	CCSGG	1 cut(s)	168
BsaJI	CCNNGG	2 cut(s)	892, 1522
BsaXI	ACNNNNNCTCC	6 cut(s)	795, 825, 1469, 1499, 2098, 2128
Bsc4I	CCNNNNNNNGG	8 cut(s)	79, 80, 167, 211, 542, 937, 1078, 2074
Bse118I	RCCGGY	2 cut(s)	500, 535
Bse1I	ACTGG	9 cut(s)	185, 268, 458, 586, 931, 1269, 1280, 1319, 1389
Bse3DI	GCAATG	3 cut(s)	393, 513, 1581
BseDI	CCNNGG	2 cut(s)	892, 1522
BseGI	GGATG	3 cut(s)	820, 1156, 2083
BseLI	CCNNNNNNNGG	8 cut(s)	79, 80, 167, 211, 542, 937, 1078, 2074
BseMI	GCAATG	3 cut(s)	393, 513, 1581
BseMII	CTCAG	4 cut(s)	134, 674, 1233, 1317
BseNI	ACTGG	9 cut(s)	185, 268, 458, 586, 931, 1269, 1280, 1319, 1389
BseRI	GAGGAG	3 cut(s)	108, 2119, 2203
BseXI	GCAGC	1 cut(s)	1502
BsgI	GTGCAG	1 cut(s)	1329
BshFI	GGCC	6 cut(s)	412, 1387, 1808, 1983, 2067, 2172
BshNI	GGYRCC	1 cut(s)	2119
BsiHKAI	GWGCWC	2 cut(s)	993, 1978
BsiHKCI	CYCGRG	1 cut(s)	744
BsiSI	CCGG	3 cut(s)	167, 501, 536
BslFI	GGGAC	5 cut(s)	235, 440, 514, 1055, 2315
BslI	CCNNNNNNNGG	8 cut(s)	79, 80, 167, 211, 542, 937, 1078, 2074
BsmAI	GTCTC	1 cut(s)	1442
BsmFI	GGGAC	5 cut(s)	235, 440, 514, 1055, 2315
BsmI	GAATGC	2 cut(s)	1790, 2010
BsnI	GGCC	6 cut(s)	412, 1387, 1808, 1983, 2067, 2172
BsoBI	CYCGRG	1 cut(s)	744
Bsp1286I	GDGCHC	3 cut(s)	993, 1425, 1978
Bsp1407I	TGTACA	1 cut(s)	1112
Bsp143I	GATC	4 cut(s)	33, 365, 1503, 1699
Bsp1720I	GCTNAGC	1 cut(s)	1242
Bsp19I	CCATGG	1 cut(s)	1522
BspACI	CCGC	5 cut(s)	45, 106, 125, 128, 923
BspANI	GGCC	6 cut(s)	412, 1387, 1808, 1983, 2067, 2172
BspCNI	CTCAG	4 cut(s)	133, 675, 1234, 1316
BspHI	TCATGA	2 cut(s)	256, 2250
BspLI	GGNNCC	2 cut(s)	1911, 2121
BspOI	GCTAGC	1 cut(s)	1268
BspPI	GGATC	2 cut(s)	360, 1694
BspQI	GCTCTTC	2 cut(s)	318, 710
BspT107I	GGYRCC	1 cut(s)	2119
BspTI	CTTAAG	1 cut(s)	1627
BsrDI	GCAATG	3 cut(s)	393, 513, 1581
BsrFI	RCCGGY	2 cut(s)	500, 535
BsrGI	TGTACA	1 cut(s)	1112
BsrI	ACTGG	9 cut(s)	185, 268, 458, 586, 931, 1269, 1280, 1319, 1389
BssAI	RCCGGY	2 cut(s)	500, 535
BssECI	CCNNGG	2 cut(s)	892, 1522
BssMI	GATC	4 cut(s)	33, 365, 1503, 1699
BssT1I	CCWWGG	1 cut(s)	1522
Bst4CI	ACNGT	5 cut(s)	361, 581, 986, 1847, 2248
Bst6I	CTCTTC	6 cut(s)	59, 318, 710, 1545, 1642, 1671
BstAFI	CTTAAG	1 cut(s)	1627
BstAPI	GCANNNNNTGC	1 cut(s)	788
BstAUI	TGTACA	1 cut(s)	1112
BstC8I	GCNNGC	4 cut(s)	485, 502, 1239, 1266
BstDEI	CTNAG	8 cut(s)	120, 683, 1242, 1303, 1670, 1686, 1899, 2346
BstDSI	CCRYGG	2 cut(s)	892, 1522
BstEII	GGTNACC	1 cut(s)	1171
BstF5I	GGATG	3 cut(s)	820, 1156, 2083
BstHHI	GCGC	1 cut(s)	506
BstKTI	GATC	4 cut(s)	36, 368, 1506, 1702
BstMAI	GTCTC	1 cut(s)	1442
BstMBI	GATC	4 cut(s)	33, 365, 1503, 1699
BstMWI	GCNNNNNNNGC	6 cut(s)	136, 788, 1243, 1499, 2064, 2138
BstNSI	RCATGY	1 cut(s)	1241
BstPI	GGTNACC	1 cut(s)	1171
BstSCI	CCNGG	1 cut(s)	166
BstV1I	GCAGC	1 cut(s)	1502
BstV2I	GAAGAC	1 cut(s)	671
BsuRI	GGCC	6 cut(s)	412, 1387, 1808, 1983, 2067, 2172
BtgI	CCRYGG	2 cut(s)	892, 1522
BtsCI	GGATG	3 cut(s)	820, 1156, 2083
BtsIMutI	CAGTG	4 cut(s)	991, 1276, 1396, 1948
Cac8I	GCNNGC	4 cut(s)	485, 502, 1239, 1266
CciI	TCATGA	2 cut(s)	256, 2250
CfoI	GCGC	1 cut(s)	506
Cfr10I	RCCGGY	2 cut(s)	500, 535
Cfr13I	GGNCC	3 cut(s)	288, 410, 1386
Csp6I	GTAC	3 cut(s)	582, 1113, 1843
CviQI	GTAC	3 cut(s)	582, 1113, 1843
DdeI	CTNAG	8 cut(s)	120, 683, 1242, 1303, 1670, 1686, 1899, 2346
DpnI	GATC	4 cut(s)	35, 367, 1505, 1701
DpnII	GATC	4 cut(s)	33, 365, 1503, 1699
EaeI	YGGCCR	2 cut(s)	1806, 2065
Eam1104I	CTCTTC	6 cut(s)	59, 318, 710, 1545, 1642, 1671
EarI	CTCTTC	6 cut(s)	59, 318, 710, 1545, 1642, 1671
Ecl136II	GAGCTC	1 cut(s)	1976
Eco130I	CCWWGG	1 cut(s)	1522
Eco24I	GRGCYC	2 cut(s)	1425, 1978
Eco47I	GGWCC	1 cut(s)	288
Eco53kI	GAGCTC	1 cut(s)	1976
Eco57I	CTGAAG	1 cut(s)	2163
Eco88I	CYCGRG	1 cut(s)	744
Eco91I	GGTNACC	1 cut(s)	1171
EcoICRI	GAGCTC	1 cut(s)	1976
EcoO65I	GGTNACC	1 cut(s)	1171
EcoRI	GAATTC	1 cut(s)	1195
EcoT14I	CCWWGG	1 cut(s)	1522
EcoT38I	GRGCYC	2 cut(s)	1425, 1978
ErhI	CCWWGG	1 cut(s)	1522
FaqI	GGGAC	5 cut(s)	235, 440, 514, 1055, 2315
FauI	CCCGC	1 cut(s)	52
FauNDI	CATATG	1 cut(s)	1822
Fnu4HI	GCNGC	5 cut(s)	106, 125, 128, 924, 1491
FokI	GGATG	3 cut(s)	827, 1163, 2090
FriOI	GRGCYC	2 cut(s)	1425, 1978
Fsp4HI	GCNGC	5 cut(s)	106, 125, 128, 924, 1491
FspBI	CTAG	5 cut(s)	1265, 1332, 1539, 2168, 2273
GlaI	GCGC	1 cut(s)	505
GluI	GCNGC	5 cut(s)	106, 125, 128, 924, 1491
GsuI	CTGGAG	1 cut(s)	1034
HaeIII	GGCC	6 cut(s)	412, 1387, 1808, 1983, 2067, 2172
HapII	CCGG	3 cut(s)	167, 501, 536
HhaI	GCGC	1 cut(s)	506
Hin6I	GCGC	1 cut(s)	504
HinP1I	GCGC	1 cut(s)	504
HincII	GTYRAC	1 cut(s)	1285
HindII	GTYRAC	1 cut(s)	1285
HindIII	AAGCTT	1 cut(s)	1667
HpaII	CCGG	3 cut(s)	167, 501, 536
HphI	GGTGA	3 cut(s)	85, 1840, 1906
Hpy166II	GTNNAC	8 cut(s)	149, 298, 357, 577, 774, 1277, 1285, 1759
Hpy188I	TCNGA	7 cut(s)	33, 144, 514, 640, 1098, 1194, 1477
Hpy188III	TCNNGA	8 cut(s)	257, 592, 758, 1072, 1141, 1703, 2201, 2251
Hpy8I	GTNNAC	8 cut(s)	149, 298, 357, 577, 774, 1277, 1285, 1759
HpyAV	CCTTC	8 cut(s)	18, 106, 379, 691, 802, 1474, 1652, 1832
HpyCH4III	ACNGT	5 cut(s)	361, 581, 986, 1847, 2248
HpyCH4IV	ACGT	1 cut(s)	1812
HpyF10VI	GCNNNNNNNGC	6 cut(s)	136, 788, 1243, 1499, 2064, 2138
HpyF3I	CTNAG	8 cut(s)	120, 683, 1242, 1303, 1670, 1686, 1899, 2346
HpySE526I	ACGT	1 cut(s)	1812
HspAI	GCGC	1 cut(s)	504
KroI	GCCGGC	1 cut(s)	500
KroNI	GCCGGC	1 cut(s)	502
Kzo9I	GATC	4 cut(s)	33, 365, 1503, 1699
LguI	GCTCTTC	2 cut(s)	318, 710
LmnI	GCTCC	4 cut(s)	865, 1909, 1973, 2190
Lsp1109I	GCAGC	1 cut(s)	1502
LweI	GCATC	7 cut(s)	808, 1251, 1554, 1753, 1858, 2068, 2326
MaeI	CTAG	5 cut(s)	1265, 1332, 1539, 2168, 2273
MaeII	ACGT	1 cut(s)	1812
MaeIII	GTNAC	8 cut(s)	85, 132, 871, 1171, 1186, 1847, 1894, 2341
MalI	GATC	4 cut(s)	35, 367, 1505, 1701
MboI	GATC	4 cut(s)	33, 365, 1503, 1699
MhlI	GDGCHC	3 cut(s)	993, 1425, 1978
MlsI	TGGCCA	2 cut(s)	1808, 2067
MluNI	TGGCCA	2 cut(s)	1808, 2067
MlyI	GAGTC	3 cut(s)	154, 736, 979
MmeI	TCCRAC	2 cut(s)	124, 492
Mox20I	TGGCCA	2 cut(s)	1808, 2067
MroNI	GCCGGC	1 cut(s)	500
MscI	TGGCCA	2 cut(s)	1808, 2067
Msp20I	TGGCCA	2 cut(s)	1808, 2067
MspCI	CTTAAG	1 cut(s)	1627
MspI	CCGG	3 cut(s)	167, 501, 536
MspR9I	CCNGG	1 cut(s)	168
Mva1269I	GAATGC	2 cut(s)	1790, 2010
MwoI	GCNNNNNNNGC	6 cut(s)	136, 788, 1243, 1499, 2064, 2138
NaeI	GCCGGC	1 cut(s)	502
NciI	CCSGG	1 cut(s)	168
NcoI	CCATGG	1 cut(s)	1522
NdeI	CATATG	1 cut(s)	1822
NdeII	GATC	4 cut(s)	33, 365, 1503, 1699
NgoMIV	GCCGGC	1 cut(s)	500
NheI	GCTAGC	1 cut(s)	1264
NlaIV	GGNNCC	2 cut(s)	1911, 2121
NmeAIII	GCCGAG	1 cut(s)	993
NmuCI	GTSAC	3 cut(s)	85, 1894, 2341
NspI	RCATGY	1 cut(s)	1241
PaeI	GCATGC	1 cut(s)	1241
PaeR7I	CTCGAG	1 cut(s)	744
PagI	TCATGA	2 cut(s)	256, 2250
PciSI	GCTCTTC	2 cut(s)	318, 710
PctI	GAATGC	2 cut(s)	1790, 2010
PdiI	GCCGGC	1 cut(s)	502
PfeI	GAWTC	7 cut(s)	215, 230, 433, 547, 1340, 1535, 1860
PkrI	GCNGC	5 cut(s)	107, 126, 129, 925, 1492
PleI	GAGTC	3 cut(s)	153, 736, 978
PpsI	GAGTC	3 cut(s)	153, 736, 978
PshBI	ATTAAT	3 cut(s)	786, 996, 1101
PsiI	TTATAA	3 cut(s)	977, 1929, 2045
Psp124BI	GAGCTC	1 cut(s)	1978
Psp1406I	AACGTT	1 cut(s)	1812
PspEI	GGTNACC	1 cut(s)	1171
PspN4I	GGNNCC	2 cut(s)	1911, 2121
PspPI	GGNCC	3 cut(s)	288, 410, 1386
PspXI	VCTCGAGB	1 cut(s)	744
RsaI	GTAC	3 cut(s)	583, 1114, 1844
RsaNI	GTAC	3 cut(s)	582, 1113, 1843
SacI	GAGCTC	1 cut(s)	1978
SapI	GCTCTTC	2 cut(s)	318, 710
SatI	GCNGC	5 cut(s)	106, 125, 128, 924, 1491
Sau3AI	GATC	4 cut(s)	33, 365, 1503, 1699
Sau96I	GGNCC	3 cut(s)	288, 410, 1386
SchI	GAGTC	3 cut(s)	154, 736, 979
ScrFI	CCNGG	1 cut(s)	168
SduI	GDGCHC	3 cut(s)	993, 1425, 1978
SfaNI	GCATC	7 cut(s)	808, 1251, 1554, 1753, 1858, 2068, 2326
Sfr274I	CTCGAG	1 cut(s)	744
SinI	GGWCC	1 cut(s)	288
SlaI	CTCGAG	1 cut(s)	744
SmlI	CTYRAG	6 cut(s)	710, 744, 1139, 1568, 1580, 1627
SmoI	CTYRAG	6 cut(s)	710, 744, 1139, 1568, 1580, 1627
SphI	GCATGC	1 cut(s)	1241
SsiI	CCGC	5 cut(s)	45, 106, 125, 128, 923
SspI	AATATT	2 cut(s)	1126, 2062
SspMI	CTAG	5 cut(s)	1265, 1332, 1539, 2168, 2273
SstI	GAGCTC	1 cut(s)	1978
StyD4I	CCNGG	1 cut(s)	166
StyI	CCWWGG	1 cut(s)	1522
TaaI	ACNGT	5 cut(s)	361, 581, 986, 1847, 2248
TaiI	ACGT	1 cut(s)	1815
TaqI	TCGA	6 cut(s)	364, 745, 1163, 1455, 1548, 2073
TatI	WGTACW	1 cut(s)	1112
TauI	GCSGC	4 cut(s)	108, 127, 130, 926
TfiI	GAWTC	7 cut(s)	215, 230, 433, 547, 1340, 1535, 1860
TscAI	CASTG	4 cut(s)	991, 1276, 1396, 1948
TseFI	GTSAC	3 cut(s)	85, 1894, 2341
TseI	GCWGC	1 cut(s)	1490
Tsp45I	GTSAC	3 cut(s)	85, 1894, 2341
TspDTI	ATGAA	9 cut(s)	273, 305, 314, 374, 560, 2012, 2080, 2112, 2247
TspGWI	ACGGA	2 cut(s)	645, 1909
TspRI	CASTG	4 cut(s)	991, 1276, 1396, 1948
Vha464I	CTTAAG	1 cut(s)	1627
VpaK11BI	GGWCC	1 cut(s)	288
VspI	ATTAAT	3 cut(s)	786, 996, 1101
XapI	RAATTY	6 cut(s)	260, 595, 1195, 1352, 1441, 1915
XceI	RCATGY	1 cut(s)	1241
XhoI	CTCGAG	1 cut(s)	744
XspI	CTAG	5 cut(s)	1265, 1332, 1539, 2168, 2273

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.