Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0003055

Physical Location & Seq

Genomic Coordinates Reverse (-)

15787055 .. 15795742

Gene Structure 8688 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g24430.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2337 bp

ATGGATTTGAGAAGGCTCTCCATCTCCAAACCCGCTTCTCTCTTCTACCCAATCACGCGCCCCATAACAGGCGTGACATTCACCTTACAACGCCGCCACGACCCTCCTCCTCCGCCGCTGTCGTTACAGCCTCCGACTCCACCGCAGCCTCCCAATCCGGGTTTGCTCAACTGGGTATCTTCTGTTCTCTCAAACCCATCTTTGGATTCTTCTAAATGTGAGTCTCTCATACCCCTTTTGTCCCCTCATCAATTTGATCACTTGTTCTACTCCATTAGGTCCAATGTCAACCCCAAAACAGCTCTTCATTTCTTTCATTTCGCTTCTCAATCTTTCAAGTTTCGCTTTACTGTTCGATCTTTCTGTGTCTTGGTTCATTTGCTCATTGCTTCGAATCTTGAGGCTCCTGCGAGGTTGCTTTTGATTCGTTTGATTGATGGGAATGTCCCAGTTTTGTATGCTGACCCCAGTAGCAAGCATGTTGAGATAGCCACTGCATTGTCGGAGTTGAATAATGCGTCCCAGCCGGCTCTGGGGATTCAGGCATTGGATATGTTAGTTCATGTTTACTGTACCCAGTTTAAGAATTTGGGTTTTGGTTATGCTGTTGAGGTGTTTGAGCATTTTACGGATCAGGGTGTGTTTCCGTCTTTGAAGACATGTAATTTTCTGCTGAGTGCTTTAGTGAAGGCTAACGAACTTGAGAAGAGCTATCATGTATTTGAGGTCATGAGTCGAGGTGTTTCTCCTGATGTTTACTTGTTTACCACTGCTATCAATGCATTTTGCAAAGGAGAAAGGGTGGATGATGCAATAGCTTTGTTCTCAAAAATGGAGAGGATTGGTATTGCTCCGAATGTGGTTACTTACAATAGTGTTATCCACGGCCTATGTAAGAGTAGAAGATTGGAGGAGGCTTTCAAGTTTAAGGAGAAAATGGTAGAGAATAATGTGAGCCCGAGTCTTATAACATACAGTGTGCTCATTAATGATTTGATTAAGCAGGAGATGTTTTATGTGGCCAATTGTGTTTTCAAGGAAATGCGTTGTAGGGGATTTGTCCCTAATGAGGTTCTATATAACAGACTGATTGATGGGTATTGTACAATGGGAAATATTGGTGAGGCACTCAAGATAAAGGATGATATGGTATCAAATGGGGTTACCCCTAATTCTGTTACTCTAAATTCACTACTGCAAGGATTGTGTAAAAATAATCAATTTGAGCATGCTGAGCAATTCTTGGACAAGATGCTAGCAAGTGGTTTATCGGTTAACCAAGATGTTACTTACTCAGTCATTCACTGGTTATGCACAAAGTCTAGATTTGATTCTGCACTAAATTTCACTACTGAAATGTTAGTAAGAAACTTCAGGCCCAGTGATAGTTTGCTTACCACATTGTTCCTTGGGCTCTGTAAACATGGGAAGAATTTAGAGGCAATCGAACTTTGGTTTAGGCTATCGGAGAAGGGGTTTGCAGCCAATACAGCTACCTCAAATGCTCTAATCCAAGGACTTTGTGAAAATGGGGGCATTGAAGAGGTTGTTAGGCTACTCGAGGCAATGCTTGAGAGGGGTTTGACATTAGATAAGATCTCATACAGTACACTCATCTTGAGTTGCAAGAAGGAAAGAGTGGCGGAAGGTTTTAAGCTTAGGGAAAAGATGTCTAAGCAAGGAATTGATCCTGACATCAACAGTTACAATATGCTACTGTATGGTCTATGTAGTATAGACAAAGTGGACGATGCTGTAAAACTTTGGGTTGAATGCGAAAACCATGGTCTTGTGGCCAATGTTTATACATATGAGGTGATGATAGAGGGGTACTGTAAGGCTGGTAGAATCAAAGACGCTGAACTCTTATTTAGTAAGTTGTTGAGTAAGAAAGTGGAACCAACTTCCATTGTTTATAATACTCTAATCAGTGCATATTGTATTGATGGGAATATGATTGAAGCTCTTGGTCTATTCCATGACATGAAAAACAAGGGCATTCGACCAACTTATGCCTCATATTTTTCTCTTATACAGAGGCTGTGCAATATTGGCAATGTTGAAAATGCAAAAGAACTCATTGATGATATGAGGATGAATGATTTGCTGCCGAATGTTGCTTGTTATGCTGAAGTGATTCATGGTTATTGTAAGCTAGGGAAAATGGATCAAGCGAGGAGTGTTTGTCTGGAGATGTCCTCATATGATATACAACCAAATAAAATTATCTACACAGTCATGATTGATGGGTACTGTAAGCTAGGCAACATGGAGCAAAGAAATATACTTCAATGTGAGATGGCAAAAAAGGGATTTGCCCCAGATGCAGTCACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

779

Amino Acids

87.37

Weight (kDa)

6.79

Isoelectric Point (pI)

37.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	216 - 264	7.5e-08	PPR repeat family
PPR_3	PF13812	242 - 294	6.1e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	246 - 279	3e-10	PPR repeat
PPR_2	PF13041	250 - 297	1.1e-13	PPR repeat family
PPR_2	PF13041	331 - 373	4.3e-06	PPR repeat family
PPR_2	PF13041	361 - 404	2e-09	PPR repeat family
PPR_2	PF13041	407 - 442	9.8e-08	PPR repeat family
PPR_1	PF12854	426 - 455	4e-06	PPR repeat
PPR_2	PF13041	429 - 478	8.8e-12	PPR repeat family
PPR_3	PF13812	454 - 511	2.5e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	461 - 491	2.6e-09	PPR repeat
PPR_2	PF13041	465 - 505	5.2e-08	PPR repeat family
TPR_24	PF23276	492 - 590	4.5e-08	Fungal tetratrico peptide repeats
PPR_1	PF12854	497 - 528	4.8e-08	PPR repeat
PPR_2	PF13041	499 - 548	3.4e-13	PPR repeat family
PPR	PF01535	503 - 532	2.7e-09	PPR repeat
PPR_long	PF17177	518 - 621	2.4e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	523 - 579	1.7e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	569 - 618	8.3e-12	PPR repeat family
PPR_2	PF13041	604 - 643	1.6e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0003055)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19440 AT4G19440 AT4G19440 AT4G19440
fragaria_vesca	FvH4_4g10410 FvH4_4g10410 FvH4_4g10440 FvH4_5g24430 FvH4_5g24430 FvH4_5g24430 FvH4_5g24430
malus_domestica	MD06G1022200.v1.1
prunus_persica	Prupe.3G018200_v2.0.a1
pyrus_communis	pycom06g01610
rosa_chinensis	RchiOBHm_Chr4g0405931 RchiOBHm_Chr7g0214821 RchiOBHm_Chr7g0219861
rosa_laevigata	RLG00000002716 RLG00000008810
rosa_multiflora	Rmu_sc0002308.1_g000021 Rmu_sc0019702.1_g000004 Rmu_ssc0000087.1_g000071
rosa_roxburghii	Rroxscaffold_3G00244980 Rroxscaffold_5G00350670
rosa_rugosa	Rorug04G0064100 Rorug07G0147600 Rorug07G0147700 Rorug07G0147800
rosa_samantha	Rh4AG134900 Rh4BG130500 Rh4CG142300 Rh4DG129200 Rh7AG284500 Rh7BG275300 Rh7CG303700 Rh7DG287900
rosa_wichuraiana	Rw4G010980 Rw7G024260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	968, 1917
AccII	CGCG	1 cut(s)	58
AciI	CCGC	6 cut(s)	33, 94, 113, 116, 143, 1643
AclWI	GGATC	3 cut(s)	639, 1682, 2175
AcoI	YGGCCR	2 cut(s)	1020, 1794
AcsI	RAATTY	4 cut(s)	586, 1186, 1342, 1432
AcuI	CTGAAG	2 cut(s)	1357, 2151
AfaI	GTAC	5 cut(s)	574, 1105, 1609, 1832, 2252
AfiI	CCNNNNNNNGG	5 cut(s)	68, 158, 202, 533, 1069
AflIII	ACRYGT	1 cut(s)	659
AjuI	GAANNNNNNNTTGG	2 cut(s)	1016, 1048
AluBI	AGCT	8 cut(s)	302, 711, 818, 1493, 1657, 1964, 2155, 2260
AluI	AGCT	8 cut(s)	302, 711, 818, 1493, 1657, 1964, 2155, 2260
Alw21I	GWGCWC	1 cut(s)	984
Alw26I	GTCTC	1 cut(s)	228
AlwI	GGATC	3 cut(s)	639, 1682, 2175
AlwNI	CAGNNNCTG	1 cut(s)	2041
Ama87I	CYCGRG	2 cut(s)	958, 1559
AoxI	GGCC	4 cut(s)	886, 1020, 1376, 1794
ApeKI	GCWGC	3 cut(s)	145, 1481, 2107
ApoI	RAATTY	4 cut(s)	586, 1186, 1342, 1432
AseI	ATTAAT	1 cut(s)	987
Asp700I	GAANNNNTTC	1 cut(s)	2136
AspLEI	GCGC	1 cut(s)	60
AspS9I	GGNCC	2 cut(s)	279, 1377
AsuC2I	CCSGG	1 cut(s)	159
AsuHPI	GGTGA	3 cut(s)	73, 1133, 1828
AsuII	TTCGAA	1 cut(s)	392
AsuNHI	GCTAGC	1 cut(s)	1255
AvaI	CYCGRG	2 cut(s)	958, 1559
AvaII	GGWCC	1 cut(s)	279
BalI	TGGCCA	2 cut(s)	1022, 1796
BanII	GRGCYC	2 cut(s)	959, 1416
BbsI	GAAGAC	1 cut(s)	662
Bbv12I	GWGCWC	1 cut(s)	984
BbvI	GCAGC	3 cut(s)	157, 1493, 2094
BccI	CCATC	7 cut(s)	29, 205, 431, 1088, 1940, 2240, 2293
BceAI	ACGGC	1 cut(s)	901
BclI	TGATCA	1 cut(s)	256
BcnI	CCSGG	1 cut(s)	159
BcoDI	GTCTC	1 cut(s)	228
BfaI	CTAG	4 cut(s)	1256, 1323, 2156, 2261
BglII	AGATCT	1 cut(s)	1596
BisI	GCNGC	5 cut(s)	94, 116, 146, 1482, 2108
BlpI	GCTNAGC	1 cut(s)	1233
BlsI	GCNGC	5 cut(s)	95, 117, 147, 1483, 2109
Bme1390I	CCNGG	1 cut(s)	159
Bme18I	GGWCC	1 cut(s)	279
BmeT110I	CYCGRG	2 cut(s)	958, 1559
BmgT120I	GGNCC	2 cut(s)	279, 1377
BmiI	GGNNCC	2 cut(s)	405, 1899
BmrFI	CCNGG	1 cut(s)	159
BmrI	ACTGGG	5 cut(s)	181, 443, 462, 571, 1374
BmsI	GCATC	4 cut(s)	799, 1242, 1741, 2314
BmtI	GCTAGC	1 cut(s)	1259
BmuI	ACTGGG	5 cut(s)	181, 443, 462, 571, 1374
BpiI	GAAGAC	1 cut(s)	662
BplI	GAGNNNNNCTC	2 cut(s)	2183, 2215
BpmI	CTGGAG	1 cut(s)	2210
Bpu10I	CCTNAGC	1 cut(s)	1658
Bpu1102I	GCTNAGC	1 cut(s)	1233
Bpu14I	TTCGAA	1 cut(s)	392
BpuEI	CTTGAG	5 cut(s)	419, 722, 1115, 1592, 1639
BpuMI	CCSGG	1 cut(s)	159
BsaJI	CCNNGG	4 cut(s)	883, 1408, 1513, 1783
BsaXI	ACNNNNNCTCC	6 cut(s)	786, 816, 1460, 1490, 2170, 2200
Bsc4I	CCNNNNNNNGG	5 cut(s)	68, 158, 202, 533, 1069
Bse118I	RCCGGY	1 cut(s)	526
Bse1I	ACTGG	6 cut(s)	176, 449, 468, 577, 1310, 1380
Bse3DI	GCAATG	3 cut(s)	384, 1572, 2062
BseDI	CCNNGG	4 cut(s)	883, 1408, 1513, 1783
BseGI	GGATG	3 cut(s)	811, 1147, 2100
BseLI	CCNNNNNNNGG	5 cut(s)	68, 158, 202, 533, 1069
BseMI	GCAATG	3 cut(s)	384, 1572, 2062
BseMII	CTCAG	3 cut(s)	665, 1224, 1308
BseNI	ACTGG	6 cut(s)	176, 449, 468, 577, 1310, 1380
BseRI	GAGGAG	4 cut(s)	96, 99, 926, 2191
BseXI	GCAGC	3 cut(s)	157, 1493, 2094
BseYI	CCCAGC	1 cut(s)	522
BsgI	GTGCAG	1 cut(s)	1320
Bsh1236I	CGCG	1 cut(s)	58
BshFI	GGCC	4 cut(s)	888, 1022, 1378, 1796
BsiHKAI	GWGCWC	1 cut(s)	984
BsiHKCI	CYCGRG	2 cut(s)	958, 1559
BsiSI	CCGG	2 cut(s)	158, 527
BslFI	GGGAC	4 cut(s)	226, 431, 505, 1046
BslI	CCNNNNNNNGG	5 cut(s)	68, 158, 202, 533, 1069
BsmAI	GTCTC	1 cut(s)	228
BsmFI	GGGAC	4 cut(s)	226, 431, 505, 1046
BsmI	GAATGC	2 cut(s)	1778, 1998
BsnI	GGCC	4 cut(s)	888, 1022, 1378, 1796
BsoBI	CYCGRG	2 cut(s)	958, 1559
Bsp119I	TTCGAA	1 cut(s)	392
Bsp1286I	GDGCHC	3 cut(s)	959, 984, 1416
Bsp1407I	TGTACA	1 cut(s)	1103
Bsp143I	GATC	6 cut(s)	256, 356, 631, 1596, 1687, 2167
Bsp1720I	GCTNAGC	1 cut(s)	1233
Bsp19I	CCATGG	1 cut(s)	1783
BspACI	CCGC	6 cut(s)	33, 94, 113, 116, 143, 1643
BspANI	GGCC	4 cut(s)	888, 1022, 1378, 1796
BspCNI	CTCAG	3 cut(s)	666, 1225, 1307
BspFNI	CGCG	1 cut(s)	58
BspHI	TCATGA	2 cut(s)	729, 2238
BspLI	GGNNCC	2 cut(s)	405, 1899
BspOI	GCTAGC	1 cut(s)	1259
BspPI	GGATC	3 cut(s)	639, 1682, 2175
BspQI	GCTCTTC	2 cut(s)	309, 701
BspT104I	TTCGAA	1 cut(s)	392
BsrDI	GCAATG	3 cut(s)	384, 1572, 2062
BsrFI	RCCGGY	1 cut(s)	526
BsrGI	TGTACA	1 cut(s)	1103
BsrI	ACTGG	6 cut(s)	176, 449, 468, 577, 1310, 1380
BssAI	RCCGGY	1 cut(s)	526
BssECI	CCNNGG	4 cut(s)	883, 1408, 1513, 1783
BssMI	GATC	6 cut(s)	256, 356, 631, 1596, 1687, 2167
BssT1I	CCWWGG	3 cut(s)	1408, 1513, 1783
Bst4CI	ACNGT	9 cut(s)	352, 572, 977, 1607, 1703, 1719, 1835, 2236, 2255
Bst6I	CTCTTC	4 cut(s)	47, 309, 701, 1536
BstAUI	TGTACA	1 cut(s)	1103
BstBI	TTCGAA	1 cut(s)	392
BstC8I	GCNNGC	4 cut(s)	476, 528, 1230, 1257
BstDEI	CTNAG	6 cut(s)	674, 1233, 1294, 1658, 1674, 2334
BstDSI	CCRYGG	2 cut(s)	883, 1783
BstEII	GGTNACC	1 cut(s)	1162
BstF5I	GGATG	3 cut(s)	811, 1147, 2100
BstFNI	CGCG	1 cut(s)	58
BstHHI	GCGC	1 cut(s)	60
BstKTI	GATC	6 cut(s)	259, 359, 634, 1599, 1690, 2170
BstMAI	GTCTC	1 cut(s)	228
BstMBI	GATC	6 cut(s)	256, 356, 631, 1596, 1687, 2167
BstMWI	GCNNNNNNNGC	6 cut(s)	779, 1234, 1490, 2052, 2126, 2324
BstNSI	RCATGY	3 cut(s)	482, 663, 1232
BstPI	GGTNACC	1 cut(s)	1162
BstSCI	CCNGG	1 cut(s)	157
BstUI	CGCG	1 cut(s)	58
BstV1I	GCAGC	3 cut(s)	157, 1493, 2094
BstV2I	GAAGAC	1 cut(s)	662
BstX2I	RGATCY	1 cut(s)	1596
BstYI	RGATCY	1 cut(s)	1596
BsuRI	GGCC	4 cut(s)	888, 1022, 1378, 1796
BtgI	CCRYGG	2 cut(s)	883, 1783
BtsCI	GGATG	3 cut(s)	811, 1147, 2100
BtsI	GCAGTG	2 cut(s)	492, 768
BtsIMutI	CAGTG	6 cut(s)	492, 768, 982, 1303, 1387, 1936
Cac8I	GCNNGC	4 cut(s)	476, 528, 1230, 1257
CaiI	CAGNNNCTG	1 cut(s)	2041
CciI	TCATGA	2 cut(s)	729, 2238
CfoI	GCGC	1 cut(s)	60
Cfr10I	RCCGGY	1 cut(s)	526
Cfr13I	GGNCC	2 cut(s)	279, 1377
CseI	GACGC	2 cut(s)	507, 1865
Csp6I	GTAC	5 cut(s)	573, 1104, 1608, 1831, 2251
CviQI	GTAC	5 cut(s)	573, 1104, 1608, 1831, 2251
DdeI	CTNAG	6 cut(s)	674, 1233, 1294, 1658, 1674, 2334
DpnI	GATC	6 cut(s)	258, 358, 633, 1598, 1689, 2169
DpnII	GATC	6 cut(s)	256, 356, 631, 1596, 1687, 2167
EaeI	YGGCCR	2 cut(s)	1020, 1794
Eam1104I	CTCTTC	4 cut(s)	47, 309, 701, 1536
EarI	CTCTTC	4 cut(s)	47, 309, 701, 1536
EciI	GGCGGA	2 cut(s)	102, 1658
Eco130I	CCWWGG	3 cut(s)	1408, 1513, 1783
Eco24I	GRGCYC	2 cut(s)	959, 1416
Eco47I	GGWCC	1 cut(s)	279
Eco57I	CTGAAG	2 cut(s)	1357, 2151
Eco88I	CYCGRG	2 cut(s)	958, 1559
Eco91I	GGTNACC	1 cut(s)	1162
EcoO65I	GGTNACC	1 cut(s)	1162
EcoT14I	CCWWGG	3 cut(s)	1408, 1513, 1783
EcoT22I	ATGCAT	1 cut(s)	784
EcoT38I	GRGCYC	2 cut(s)	959, 1416
ErhI	CCWWGG	3 cut(s)	1408, 1513, 1783
FalI	AAGNNNNNCTT	2 cut(s)	329, 361
FaqI	GGGAC	4 cut(s)	226, 431, 505, 1046
FauI	CCCGC	1 cut(s)	40
FauNDI	CATATG	2 cut(s)	1810, 2203
FbaI	TGATCA	1 cut(s)	256
Fnu4HI	GCNGC	5 cut(s)	94, 116, 146, 1482, 2108
FokI	GGATG	3 cut(s)	818, 1154, 2107
FriOI	GRGCYC	2 cut(s)	959, 1416
Fsp4HI	GCNGC	5 cut(s)	94, 116, 146, 1482, 2108
FspBI	CTAG	4 cut(s)	1256, 1323, 2156, 2261
GlaI	GCGC	1 cut(s)	59
GluI	GCNGC	5 cut(s)	94, 116, 146, 1482, 2108
GsaI	CCCAGC	1 cut(s)	526
GsuI	CTGGAG	1 cut(s)	2210
HaeIII	GGCC	4 cut(s)	888, 1022, 1378, 1796
HapII	CCGG	2 cut(s)	158, 527
HgaI	GACGC	2 cut(s)	507, 1865
HhaI	GCGC	1 cut(s)	60
Hin6I	GCGC	1 cut(s)	58
HinP1I	GCGC	1 cut(s)	58
HincII	GTYRAC	2 cut(s)	289, 1276
HindII	GTYRAC	2 cut(s)	289, 1276
HindIII	AAGCTT	1 cut(s)	1655
HpaI	GTTAAC	1 cut(s)	1276
HpaII	CCGG	2 cut(s)	158, 527
HphI	GGTGA	3 cut(s)	73, 1133, 1828
Hpy166II	GTNNAC	8 cut(s)	289, 568, 757, 765, 1276, 1421, 1610, 1747
Hpy188I	TCNGA	4 cut(s)	135, 505, 855, 1468
Hpy188III	TCNNGA	9 cut(s)	398, 730, 749, 1132, 1323, 1618, 1691, 2189, 2239
Hpy8I	GTNNAC	8 cut(s)	289, 568, 757, 765, 1276, 1421, 1610, 1747
HpyAV	CCTTC	5 cut(s)	6, 682, 1465, 1624, 1640
HpyCH4III	ACNGT	9 cut(s)	352, 572, 977, 1607, 1703, 1719, 1835, 2236, 2255
HpyF10VI	GCNNNNNNNGC	6 cut(s)	779, 1234, 1490, 2052, 2126, 2324
HpyF3I	CTNAG	6 cut(s)	674, 1233, 1294, 1658, 1674, 2334
HspAI	GCGC	1 cut(s)	58
KroI	GCCGGC	1 cut(s)	526
KroNI	GCCGGC	1 cut(s)	528
Ksp22I	TGATCA	1 cut(s)	256
KspAI	GTTAAC	1 cut(s)	1276
Kzo9I	GATC	6 cut(s)	256, 356, 631, 1596, 1687, 2167
LguI	GCTCTTC	2 cut(s)	309, 701
LmnI	GCTCC	3 cut(s)	409, 856, 2272
Lsp1109I	GCAGC	3 cut(s)	157, 1493, 2094
LweI	GCATC	4 cut(s)	799, 1242, 1741, 2314
MaeI	CTAG	4 cut(s)	1256, 1323, 2156, 2261
MaeIII	GTNAC	8 cut(s)	73, 123, 862, 1162, 1177, 1285, 1703, 2329
MalI	GATC	6 cut(s)	258, 358, 633, 1598, 1689, 2169
MboI	GATC	6 cut(s)	256, 356, 631, 1596, 1687, 2167
MboII	GAAGA	9 cut(s)	34, 171, 201, 296, 667, 718, 915, 1441, 1553
MfeI	CAATTG	1 cut(s)	1024
MflI	RGATCY	1 cut(s)	1596
MhlI	GDGCHC	3 cut(s)	959, 984, 1416
MlsI	TGGCCA	2 cut(s)	1022, 1796
MluNI	TGGCCA	2 cut(s)	1022, 1796
MlyI	GAGTC	4 cut(s)	130, 230, 742, 970
MmeI	TCCRAC	2 cut(s)	158, 483
Mox20I	TGGCCA	2 cut(s)	1022, 1796
Mph1103I	ATGCAT	1 cut(s)	784
MroNI	GCCGGC	1 cut(s)	526
MroXI	GAANNNNTTC	1 cut(s)	2136
MscI	TGGCCA	2 cut(s)	1022, 1796
MseI	TTAA	6 cut(s)	582, 927, 987, 999, 1275, 1653
MslI	CAYNNNNRTG	1 cut(s)	2237
Msp20I	TGGCCA	2 cut(s)	1022, 1796
MspA1I	CMGCKG	1 cut(s)	118
MspI	CCGG	2 cut(s)	158, 527
MspR9I	CCNGG	1 cut(s)	159
MunI	CAATTG	1 cut(s)	1024
Mva1269I	GAATGC	2 cut(s)	1778, 1998
MvnI	CGCG	1 cut(s)	58
MwoI	GCNNNNNNNGC	6 cut(s)	779, 1234, 1490, 2052, 2126, 2324
NaeI	GCCGGC	1 cut(s)	528
NciI	CCSGG	1 cut(s)	159
NcoI	CCATGG	1 cut(s)	1783
NdeI	CATATG	2 cut(s)	1810, 2203
NdeII	GATC	6 cut(s)	256, 356, 631, 1596, 1687, 2167
NgoMIV	GCCGGC	1 cut(s)	526
NheI	GCTAGC	1 cut(s)	1255
NlaIV	GGNNCC	2 cut(s)	405, 1899
NmuCI	GTSAC	2 cut(s)	73, 2329
NsiI	ATGCAT	1 cut(s)	784
NspI	RCATGY	3 cut(s)	482, 663, 1232
NspV	TTCGAA	1 cut(s)	392
PaeI	GCATGC	1 cut(s)	1232
PaeR7I	CTCGAG	1 cut(s)	1559
PagI	TCATGA	2 cut(s)	729, 2238
PciI	ACATGT	1 cut(s)	659
PciSI	GCTCTTC	2 cut(s)	309, 701
PctI	GAATGC	2 cut(s)	1778, 1998
PdiI	GCCGGC	1 cut(s)	528
PdmI	GAANNNNTTC	1 cut(s)	2136
PfeI	GAWTC	7 cut(s)	206, 394, 424, 538, 1331, 1848, 2137
PkrI	GCNGC	5 cut(s)	95, 117, 147, 1483, 2109
PleI	GAGTC	4 cut(s)	130, 229, 741, 969
PpsI	GAGTC	4 cut(s)	130, 229, 741, 969
PscI	ACATGT	1 cut(s)	659
PshBI	ATTAAT	1 cut(s)	987
PsiI	TTATAA	2 cut(s)	968, 1917
PspEI	GGTNACC	1 cut(s)	1162
PspFI	CCCAGC	1 cut(s)	522
PspN4I	GGNNCC	2 cut(s)	405, 1899
PspPI	GGNCC	2 cut(s)	279, 1377
PspXI	VCTCGAGB	1 cut(s)	1559
PsrI	GAACNNNNNNTAC	2 cut(s)	168, 200
PstNI	CAGNNNCTG	1 cut(s)	2041
PsuI	RGATCY	1 cut(s)	1596
RsaI	GTAC	5 cut(s)	574, 1105, 1609, 1832, 2252
RsaNI	GTAC	5 cut(s)	573, 1104, 1608, 1831, 2251
RseI	CAYNNNNRTG	1 cut(s)	2237
SapI	GCTCTTC	2 cut(s)	309, 701
SaqAI	TTAA	6 cut(s)	582, 927, 987, 999, 1275, 1653
SatI	GCNGC	5 cut(s)	94, 116, 146, 1482, 2108
Sau3AI	GATC	6 cut(s)	256, 356, 631, 1596, 1687, 2167
Sau96I	GGNCC	2 cut(s)	279, 1377
SchI	GAGTC	4 cut(s)	130, 230, 742, 970
ScrFI	CCNGG	1 cut(s)	159
SduI	GDGCHC	3 cut(s)	959, 984, 1416
SfaNI	GCATC	4 cut(s)	799, 1242, 1741, 2314
Sfr274I	CTCGAG	1 cut(s)	1559
SfuI	TTCGAA	1 cut(s)	392
SinI	GGWCC	1 cut(s)	279
SlaI	CTCGAG	1 cut(s)	1559
SmiMI	CAYNNNNRTG	1 cut(s)	2237
SmlI	CTYRAG	6 cut(s)	398, 701, 1130, 1559, 1571, 1618
SmoI	CTYRAG	6 cut(s)	398, 701, 1130, 1559, 1571, 1618
SphI	GCATGC	1 cut(s)	1232
SsiI	CCGC	6 cut(s)	33, 94, 113, 116, 143, 1643
SspI	AATATT	2 cut(s)	1117, 2050
SspMI	CTAG	4 cut(s)	1256, 1323, 2156, 2261
StyD4I	CCNGG	1 cut(s)	157
StyI	CCWWGG	3 cut(s)	1408, 1513, 1783
TaaI	ACNGT	9 cut(s)	352, 572, 977, 1607, 1703, 1719, 1835, 2236, 2255
TaqI	TCGA	6 cut(s)	355, 392, 736, 1446, 1560, 2002
TatI	WGTACW	2 cut(s)	1103, 1607
TauI	GCSGC	2 cut(s)	96, 118
TfiI	GAWTC	7 cut(s)	206, 394, 424, 538, 1331, 1848, 2137
Tru1I	TTAA	6 cut(s)	582, 927, 987, 999, 1275, 1653
Tru9I	TTAA	6 cut(s)	582, 927, 987, 999, 1275, 1653
TscAI	CASTG	6 cut(s)	499, 775, 982, 1310, 1387, 1936
TseFI	GTSAC	2 cut(s)	73, 2329
TseI	GCWGC	3 cut(s)	145, 1481, 2107
Tsp45I	GTSAC	2 cut(s)	73, 2329
TspDTI	ATGAA	7 cut(s)	296, 305, 365, 551, 2000, 2111, 2129
TspGWI	ACGGA	2 cut(s)	636, 644
TspRI	CASTG	6 cut(s)	499, 775, 982, 1310, 1387, 1936
VpaK11BI	GGWCC	1 cut(s)	279
VspI	ATTAAT	1 cut(s)	987
XapI	RAATTY	4 cut(s)	586, 1186, 1342, 1432
XbaI	TCTAGA	1 cut(s)	1322
XceI	RCATGY	3 cut(s)	482, 663, 1232
XhoI	CTCGAG	1 cut(s)	1559
XmnI	GAANNNNTTC	1 cut(s)	2136
XspI	CTAG	4 cut(s)	1256, 1323, 2156, 2261
Zsp2I	ATGCAT	1 cut(s)	784

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.