Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000932

Physical Location & Seq

Genomic Coordinates Forward (+)

13024498 .. 13027484

Gene Structure 2987 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G25500.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1053 bp

ATGAAGCCAGTCTTCTGTGGGAACTTTGAGTATGATGCGCGCGAAGGTGACCTGGAACGACTATTCAGGAAATACGGCAAGGTTGAGAGGGTTGATATGAAAGCTGGGTTTGCTTTTGTATACATGGAAGATGAAAGGGATGCGGAAGATGCCATCCGAGCACTTGACCGCTTTGAATTTGGGCGTAAGGGACGCAGACTTCGTGTTGAATGGACAAAGAGTGAACGTGGAGGTGATAAAAGATCTGGTGGTGGTTCAAGGAGATCCTCATCCAGCATGAGACCTTCCAAGACTCTCTTTGTGATTAACTTTGATGCGGATAATACTAGGACCCGGGATCTAGAGAAACACTTTGAGCCGTATGGAAAGATCGTAAACGTTAGGATCAGGAGGAATTTTGCATTTATCCAGTACGAGGCACAAGAGGATGCCACCAGAGCATTGGATGCTTCAAATAACAGTAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAATGGACACAGTCCTGAAAGACGCCGTGATAGGTCACCTGAAAGGAGAAGGCGATCACCTAGTCCTTACAAAAGAGAAAGAGGAAGCCCTGATTATGGCCGAGGAGCTAGTCCTGTTGCTGCCTACAGAAAGGAAAGGACCAGTCCTGACTATGGTCGAAGACGTAGCCCAAGTCCTTACAAGAAATCAAGACGTGGCAGTCCCGAGTATGGTCGTGACCGCAGAGGCAATGATAGCCCTCGCAGGAGGGAGAGAGTCGCAAGCCCTACTAAGTACAGCCGCAGTCCCAACAACAAGAGAGAGAGGATGAGCCCTAATCACAGCCCGTTCAAGAAGGAGAGTCCGAGAAATGGGGTTGGTGAAGTTGAAAGTCCCATTGAAAGGAGAGAGAGATCGAGGTCTAGCCCCGAGAATGGCCAAGTTGAAAGCCCTGGGTCAATAGGAAGAAGAGACAGTGATGGTGGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAGCCGGTCTCCTCGTTCGCCACCAGCTGACGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009892 GO:0009987 GO:0010033 GO:0010445 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0016604 GO:0016607 GO:0019222 GO:0031047 GO:0031050 GO:0031053 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043331 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 ko05168 map03040 map05168

Pfam Domains

Protein Families

RRM_1

Protein Analysis

350

Amino Acids

40.32

Weight (kDa)

10.2

Isoelectric Point (pI)

90.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	78 - 140	8.8e-13	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000932)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25500 AT4G25500 AT4G25500 AT4G25500 AT4G25500 AT4G25500 AT4G25500 AT4G25500 AT5G52040 AT5G52040 AT5G52040 AT5G52040 AT5G52040 AT5G52040 AT5G52040
fragaria_vesca	FvH4_7g13160 FvH4_7g13160 FvH4_7g13160 FvH4_7g13160 FvH4_7g13160 FvH4_7g13160 FvH4_7g28991 FvH4_7g28991 FvH4_7g28991 FvH4_7g28991 FvH4_7g28991
malus_domestica	MD01G1051400.v1.1 MD01G1196700.v1.1 MD07G1128300.v1.1 MD07G1264000.v1.1
prunus_persica	Prupe.2G154900_v2.0.a1 Prupe.2G154900_v2.0.a1 Prupe.2G154900_v2.0.a1 Prupe.2G290100_v2.0.a1 Prupe.2G290100_v2.0.a1 Prupe.2G290100_v2.0.a1 Prupe.2G290100_v2.0.a1
pyrus_communis	pycom01g07610 pycom07g12390 pycom07g24260
rosa_chinensis	RchiOBHm_Chr1g0352321 RchiOBHm_Chr1g0376701
rosa_laevigata	RLG00000026578 RLG00000028343
rosa_multiflora	Rmu_co8401165.1_g000001 Rmu_sc0009691.1_g000002
rosa_roxburghii	Rroxscaffold_4G00281870 Rroxscaffold_4G00303030
rosa_rugosa	Rorug01G0226500 Rorug01G0226600 Rorug01G0226700 Rorug01G0226700 Rorug01G0397600
rosa_samantha	Rh1AG241000 Rh1AG414700 Rh1BG211800 Rh1BG374100 Rh1CG224800 Rh1CG388000 Rh1DG238200 Rh1DG404900
rosa_wichuraiana	Rw1G020870 Rw1G020950 Rw1G036370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	720
AccI	GTMKAC	1 cut(s)	120
AccII	CGCG	2 cut(s)	40, 42
AciI	CCGC	5 cut(s)	143, 169, 317, 742, 802
AclI	AACGTT	1 cut(s)	378
AclWI	GGATC	3 cut(s)	258, 345, 392
AcoI	YGGCCR	2 cut(s)	619, 937
AcsI	RAATTY	2 cut(s)	176, 394
AcyI	GRCGYC	1 cut(s)	544
AfaI	GTAC	2 cut(s)	413, 797
AfiI	CCNNNNNNNGG	7 cut(s)	415, 617, 674, 731, 872, 903, 935
AgsI	TTSAA	8 cut(s)	176, 209, 258, 453, 853, 890, 902, 947
AjiI	CACGTC	1 cut(s)	716
AjnI	CCWGG	2 cut(s)	51, 952
AluBI	AGCT	4 cut(s)	104, 466, 629, 1043
AluI	AGCT	4 cut(s)	104, 466, 629, 1043
Alw21I	GWGCWC	1 cut(s)	163
Alw26I	GTCTC	3 cut(s)	274, 966, 1029
AlwI	GGATC	3 cut(s)	258, 345, 392
Ama87I	CYCGRG	3 cut(s)	333, 725, 929
AoxI	GGCC	2 cut(s)	619, 937
ApeKI	GCWGC	1 cut(s)	641
ApoI	RAATTY	2 cut(s)	176, 394
ArsI	GACNNNNNNTTYG	2 cut(s)	183, 215
AspLEI	GCGC	2 cut(s)	40, 42
AspS9I	GGNCC	2 cut(s)	330, 660
AsuC2I	CCSGG	2 cut(s)	334, 335
AsuHPI	GGTGA	6 cut(s)	59, 245, 490, 549, 570, 893
AvaI	CYCGRG	3 cut(s)	333, 725, 929
AvaII	GGWCC	2 cut(s)	330, 660
BalI	TGGCCA	1 cut(s)	939
BanII	GRGCYC	2 cut(s)	836, 1007
BbsI	GAAGAC	2 cut(s)	4, 688
Bbv12I	GWGCWC	1 cut(s)	163
BbvI	GCAGC	1 cut(s)	628
BccI	CCATC	4 cut(s)	161, 463, 974, 986
BceAI	ACGGC	3 cut(s)	91, 343, 531
BciT130I	CCWGG	2 cut(s)	53, 954
BcnI	CCSGG	2 cut(s)	334, 335
BcoDI	GTCTC	3 cut(s)	274, 966, 1029
BfaI	CTAG	6 cut(s)	327, 341, 516, 582, 630, 924
BfmI	CTRYAG	1 cut(s)	646
BglII	AGATCT	1 cut(s)	242
BisI	GCNGC	2 cut(s)	642, 802
BlsI	GCNGC	2 cut(s)	643, 803
Bme1390I	CCNGG	4 cut(s)	53, 334, 335, 954
Bme18I	GGWCC	2 cut(s)	330, 660
BmeT110I	CYCGRG	3 cut(s)	333, 725, 929
BmgBI	CACGTC	1 cut(s)	716
BmgT120I	GGNCC	2 cut(s)	330, 660
BmiI	GGNNCC	1 cut(s)	332
BmrFI	CCNGG	4 cut(s)	53, 334, 335, 954
BmsI	GCATC	7 cut(s)	25, 130, 139, 304, 418, 436, 502
BoxI	GACNNNNGTC	1 cut(s)	675
BpiI	GAAGAC	2 cut(s)	4, 688
BplI	GAGNNNNNCTC	2 cut(s)	1009, 1041
BpuMI	CCSGG	2 cut(s)	334, 335
BsaBI	GATNNNNATC	1 cut(s)	268
BsaHI	GRCGYC	1 cut(s)	544
BsaI	GGTCTC	2 cut(s)	274, 1029
BsaJI	CCNNGG	4 cut(s)	333, 622, 952, 953
Bsc4I	CCNNNNNNNGG	7 cut(s)	415, 617, 674, 731, 872, 903, 935
Bse118I	RCCGGY	1 cut(s)	1020
Bse1I	ACTGG	3 cut(s)	8, 409, 663
Bse3DI	GCAATG	1 cut(s)	757
Bse8I	GATNNNNATC	1 cut(s)	268
BseBI	CCWGG	2 cut(s)	53, 954
BseDI	CCNNGG	4 cut(s)	333, 622, 952, 953
BseGI	GGATG	7 cut(s)	145, 153, 269, 433, 451, 511, 834
BseJI	GATNNNNATC	1 cut(s)	268
BseLI	CCNNNNNNNGG	7 cut(s)	415, 617, 674, 731, 872, 903, 935
BseMI	GCAATG	1 cut(s)	757
BseNI	ACTGG	3 cut(s)	8, 409, 663
BsePI	GCGCGC	1 cut(s)	38
BseRI	GAGGAG	2 cut(s)	639, 1017
BseXI	GCAGC	1 cut(s)	628
BseYI	CCCAGC	1 cut(s)	104
BsgI	GTGCAG	1 cut(s)	1017
Bsh1236I	CGCG	2 cut(s)	40, 42
BshFI	GGCC	2 cut(s)	621, 939
BsiHKAI	GWGCWC	1 cut(s)	163
BsiHKCI	CYCGRG	3 cut(s)	333, 725, 929
BsiSI	CCGG	2 cut(s)	334, 1021
BslFI	GGGAC	4 cut(s)	204, 708, 792, 879
BslI	CCNNNNNNNGG	7 cut(s)	415, 617, 674, 731, 872, 903, 935
BsmAI	GTCTC	3 cut(s)	274, 966, 1029
BsmFI	GGGAC	4 cut(s)	204, 708, 792, 879
BsnI	GGCC	2 cut(s)	621, 939
Bso31I	GGTCTC	2 cut(s)	274, 1029
BsoBI	CYCGRG	3 cut(s)	333, 725, 929
Bsp1286I	GDGCHC	3 cut(s)	163, 836, 1007
Bsp143I	GATC	8 cut(s)	242, 263, 337, 369, 384, 480, 575, 914
BspACI	CCGC	5 cut(s)	143, 169, 317, 742, 802
BspANI	GGCC	2 cut(s)	621, 939
BspFNI	CGCG	2 cut(s)	40, 42
BspLI	GGNNCC	1 cut(s)	332
BspPI	GGATC	3 cut(s)	258, 345, 392
BspQI	GCTCTTC	1 cut(s)	1010
BspTNI	GGTCTC	2 cut(s)	274, 1029
BsrDI	GCAATG	1 cut(s)	757
BsrFI	RCCGGY	1 cut(s)	1020
BsrI	ACTGG	3 cut(s)	8, 409, 663
BssAI	RCCGGY	1 cut(s)	1020
BssECI	CCNNGG	4 cut(s)	333, 622, 952, 953
BssHII	GCGCGC	1 cut(s)	38
BssMI	GATC	8 cut(s)	242, 263, 337, 369, 384, 480, 575, 914
BssNAI	GTATAC	1 cut(s)	121
BssNI	GRCGYC	1 cut(s)	544
Bst1107I	GTATAC	1 cut(s)	121
Bst2UI	CCWGG	2 cut(s)	53, 954
Bst4CI	ACNGT	3 cut(s)	461, 533, 977
Bst6I	CTCTTC	2 cut(s)	964, 1010
BstACI	GRCGYC	1 cut(s)	544
BstAPI	GCANNNNNTGC	1 cut(s)	446
BstC8I	GCNNGC	2 cut(s)	40, 784
BstDEI	CTNAG	1 cut(s)	792
BstEII	GGTNACC	2 cut(s)	47, 555
BstF5I	GGATG	7 cut(s)	145, 153, 269, 433, 451, 511, 834
BstFNI	CGCG	2 cut(s)	40, 42
BstHHI	GCGC	2 cut(s)	40, 42
BstKTI	GATC	8 cut(s)	245, 266, 340, 372, 387, 483, 578, 917
BstMAI	GTCTC	3 cut(s)	274, 966, 1029
BstMBI	GATC	8 cut(s)	242, 263, 337, 369, 384, 480, 575, 914
BstMWI	GCNNNNNNNGC	6 cut(s)	110, 149, 158, 437, 446, 756
BstNI	CCWGG	2 cut(s)	53, 954
BstPAI	GACNNNNGTC	1 cut(s)	675
BstPI	GGTNACC	2 cut(s)	47, 555
BstSCI	CCNGG	4 cut(s)	51, 332, 333, 952
BstSFI	CTRYAG	1 cut(s)	646
BstUI	CGCG	2 cut(s)	40, 42
BstV1I	GCAGC	1 cut(s)	628
BstV2I	GAAGAC	2 cut(s)	4, 688
BstX2I	RGATCY	3 cut(s)	242, 263, 337
BstXI	CCANNNNNNTGG	1 cut(s)	442
BstYI	RGATCY	3 cut(s)	242, 263, 337
BstZ17I	GTATAC	1 cut(s)	121
BsuRI	GGCC	2 cut(s)	621, 939
BtrI	CACGTC	1 cut(s)	716
BtsCI	GGATG	7 cut(s)	145, 153, 269, 433, 451, 511, 834
BtsIMutI	CAGTG	1 cut(s)	982
Cac8I	GCNNGC	2 cut(s)	40, 784
CfoI	GCGC	2 cut(s)	40, 42
Cfr10I	RCCGGY	1 cut(s)	1020
Cfr13I	GGNCC	2 cut(s)	330, 660
Cfr9I	CCCGGG	1 cut(s)	333
CseI	GACGC	2 cut(s)	201, 552
Csp6I	GTAC	2 cut(s)	412, 796
CviAII	CATG	2 cut(s)	124, 277
CviQI	GTAC	2 cut(s)	412, 796
DdeI	CTNAG	1 cut(s)	792
DpnI	GATC	8 cut(s)	244, 265, 339, 371, 386, 482, 577, 916
DpnII	GATC	8 cut(s)	242, 263, 337, 369, 384, 480, 575, 914
DrdI	GACNNNNNNGTC	1 cut(s)	720
DseDI	GACNNNNNNGTC	1 cut(s)	720
EaeI	YGGCCR	2 cut(s)	619, 937
Eam1104I	CTCTTC	2 cut(s)	964, 1010
EarI	CTCTTC	2 cut(s)	964, 1010
Eco24I	GRGCYC	2 cut(s)	836, 1007
Eco31I	GGTCTC	2 cut(s)	274, 1029
Eco47I	GGWCC	2 cut(s)	330, 660
Eco88I	CYCGRG	3 cut(s)	333, 725, 929
Eco91I	GGTNACC	2 cut(s)	47, 555
EcoO109I	RGGNCCY	1 cut(s)	330
EcoO65I	GGTNACC	2 cut(s)	47, 555
EcoRII	CCWGG	2 cut(s)	51, 952
EcoT38I	GRGCYC	2 cut(s)	836, 1007
FaeI	CATG	2 cut(s)	127, 280
FalI	AAGNNNNNCTT	3 cut(s)	28, 281, 313
FaqI	GGGAC	4 cut(s)	204, 708, 792, 879
FatI	CATG	2 cut(s)	123, 276
FblI	GTMKAC	1 cut(s)	120
Fnu4HI	GCNGC	2 cut(s)	642, 802
FokI	GGATG	7 cut(s)	140, 152, 256, 440, 458, 518, 841
FriOI	GRGCYC	2 cut(s)	836, 1007
Fsp4HI	GCNGC	2 cut(s)	642, 802
FspBI	CTAG	6 cut(s)	327, 341, 516, 582, 630, 924
GlaI	GCGC	2 cut(s)	39, 41
GluI	GCNGC	2 cut(s)	642, 802
GsaI	CCCAGC	1 cut(s)	108
HaeIII	GGCC	2 cut(s)	621, 939
HapII	CCGG	2 cut(s)	334, 1021
HgaI	GACGC	2 cut(s)	201, 552
HhaI	GCGC	2 cut(s)	40, 42
Hin1I	GRCGYC	1 cut(s)	544
Hin1II	CATG	2 cut(s)	127, 280
Hin6I	GCGC	2 cut(s)	38, 40
HinP1I	GCGC	2 cut(s)	38, 40
HinfI	GANTC	3 cut(s)	292, 777, 862
HpaII	CCGG	2 cut(s)	334, 1021
HphI	GGTGA	6 cut(s)	59, 245, 490, 549, 570, 893
Hpy166II	GTNNAC	3 cut(s)	121, 224, 376
Hpy188I	TCNGA	2 cut(s)	158, 867
Hpy188III	TCNNGA	9 cut(s)	67, 341, 388, 536, 668, 711, 725, 737, 853
Hpy8I	GTNNAC	3 cut(s)	121, 224, 376
HpyAV	CCTTC	5 cut(s)	38, 294, 496, 564, 850
HpyCH4III	ACNGT	3 cut(s)	461, 533, 977
HpyCH4IV	ACGT	4 cut(s)	226, 378, 685, 715
HpyCH4V	TGCA	3 cut(s)	401, 998, 1012
HpyF10VI	GCNNNNNNNGC	6 cut(s)	110, 149, 158, 437, 446, 756
HpyF3I	CTNAG	1 cut(s)	792
HpySE526I	ACGT	4 cut(s)	226, 378, 685, 715
Hsp92I	GRCGYC	1 cut(s)	544
Hsp92II	CATG	2 cut(s)	127, 280
HspAI	GCGC	2 cut(s)	38, 40
Kzo9I	GATC	8 cut(s)	242, 263, 337, 369, 384, 480, 575, 914
LguI	GCTCTTC	1 cut(s)	1010
LmnI	GCTCC	1 cut(s)	626
Lsp1109I	GCAGC	1 cut(s)	628
LweI	GCATC	7 cut(s)	25, 130, 139, 304, 418, 436, 502
MaeI	CTAG	6 cut(s)	327, 341, 516, 582, 630, 924
MaeII	ACGT	4 cut(s)	226, 378, 685, 715
MaeIII	GTNAC	3 cut(s)	47, 555, 737
MalI	GATC	8 cut(s)	244, 265, 339, 371, 386, 482, 577, 916
MboI	GATC	8 cut(s)	242, 263, 337, 369, 384, 480, 575, 914
MboII	GAAGA	7 cut(s)	4, 140, 158, 693, 978, 981, 1027
MflI	RGATCY	3 cut(s)	242, 263, 337
MhlI	GDGCHC	3 cut(s)	163, 836, 1007
MlsI	TGGCCA	1 cut(s)	939
MluCI	AATT	2 cut(s)	176, 394
MluNI	TGGCCA	1 cut(s)	939
MlyI	GAGTC	3 cut(s)	286, 786, 871
Mox20I	TGGCCA	1 cut(s)	939
MscI	TGGCCA	1 cut(s)	939
MseI	TTAA	1 cut(s)	306
Msp20I	TGGCCA	1 cut(s)	939
MspA1I	CMGCKG	1 cut(s)	1043
MspI	CCGG	2 cut(s)	334, 1021
MspR9I	CCNGG	4 cut(s)	53, 334, 335, 954
MvaI	CCWGG	2 cut(s)	53, 954
MvnI	CGCG	2 cut(s)	40, 42
MwoI	GCNNNNNNNGC	6 cut(s)	110, 149, 158, 437, 446, 756
NciI	CCSGG	2 cut(s)	334, 335
NdeII	GATC	8 cut(s)	242, 263, 337, 369, 384, 480, 575, 914
NlaIII	CATG	2 cut(s)	127, 280
NlaIV	GGNNCC	1 cut(s)	332
NmeAIII	GCCGAG	1 cut(s)	647
NmuCI	GTSAC	3 cut(s)	47, 555, 737
PasI	CCCWGGG	1 cut(s)	953
PauI	GCGCGC	1 cut(s)	38
PciSI	GCTCTTC	1 cut(s)	1010
PcsI	WCGNNNNNNNCGW	1 cut(s)	199
PflFI	GACNNNGTC	1 cut(s)	531
PkrI	GCNGC	2 cut(s)	643, 803
PleI	GAGTC	3 cut(s)	286, 785, 870
PpsI	GAGTC	3 cut(s)	286, 785, 870
PpuMI	RGGWCCY	1 cut(s)	330
PshAI	GACNNNNGTC	1 cut(s)	675
Psp1406I	AACGTT	1 cut(s)	378
Psp5II	RGGWCCY	1 cut(s)	330
Psp6I	CCWGG	2 cut(s)	51, 952
PspEI	GGTNACC	2 cut(s)	47, 555
PspFI	CCCAGC	1 cut(s)	104
PspGI	CCWGG	2 cut(s)	51, 952
PspN4I	GGNNCC	1 cut(s)	332
PspPI	GGNCC	2 cut(s)	330, 660
PspPPI	RGGWCCY	1 cut(s)	330
PsuI	RGATCY	3 cut(s)	242, 263, 337
PsyI	GACNNNGTC	1 cut(s)	531
PteI	GCGCGC	1 cut(s)	38
PvuII	CAGCTG	1 cut(s)	1043
RsaI	GTAC	2 cut(s)	413, 797
RsaNI	GTAC	2 cut(s)	412, 796
SapI	GCTCTTC	1 cut(s)	1010
SaqAI	TTAA	1 cut(s)	306
SatI	GCNGC	2 cut(s)	642, 802
Sau3AI	GATC	8 cut(s)	242, 263, 337, 369, 384, 480, 575, 914
Sau96I	GGNCC	2 cut(s)	330, 660
SchI	GAGTC	3 cut(s)	286, 786, 871
ScrFI	CCNGG	4 cut(s)	53, 334, 335, 954
SduI	GDGCHC	3 cut(s)	163, 836, 1007
SfaNI	GCATC	7 cut(s)	25, 130, 139, 304, 418, 436, 502
SfcI	CTRYAG	1 cut(s)	646
SinI	GGWCC	2 cut(s)	330, 660
SmaI	CCCGGG	1 cut(s)	335
Sse9I	AATT	2 cut(s)	176, 394
SsiI	CCGC	5 cut(s)	143, 169, 317, 742, 802
SspMI	CTAG	6 cut(s)	327, 341, 516, 582, 630, 924
StyD4I	CCNGG	4 cut(s)	51, 332, 333, 952
TaaI	ACNGT	3 cut(s)	461, 533, 977
TaiI	ACGT	4 cut(s)	229, 381, 688, 718
TaqI	TCGA	2 cut(s)	679, 917
TasI	AATT	2 cut(s)	176, 394
TatI	WGTACW	1 cut(s)	795
TauI	GCSGC	1 cut(s)	804
Tru1I	TTAA	1 cut(s)	306
Tru9I	TTAA	1 cut(s)	306
TscAI	CASTG	1 cut(s)	982
TseFI	GTSAC	3 cut(s)	47, 555, 737
TseI	GCWGC	1 cut(s)	641
Tsp45I	GTSAC	3 cut(s)	47, 555, 737
TspDTI	ATGAA	3 cut(s)	17, 113, 147
TspMI	CCCGGG	1 cut(s)	333
TspRI	CASTG	1 cut(s)	982
Tth111I	GACNNNGTC	1 cut(s)	531
VpaK11BI	GGWCC	2 cut(s)	330, 660
XapI	RAATTY	2 cut(s)	176, 394
XbaI	TCTAGA	1 cut(s)	340
XcmI	CCANNNNNNNNNTGG	1 cut(s)	439
XmaI	CCCGGG	1 cut(s)	333
XmiI	GTMKAC	1 cut(s)	120
XspI	CTAG	6 cut(s)	327, 341, 516, 582, 630, 924

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.