Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0000932

Physical Location & Seq

Genomic Coordinates Forward (+)

29456976 .. 29461302

Gene Structure 4327 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1196700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ATGAGGCCGATTTTTTGCGGGAATTTTGAATATGATGCTCGACAGAATGAATTGGAGCGGCTGTTTGGTAGATATGGGAAAGTTGATAGGGTCGATATGAAGTCTGTCACTCTGATCTGCAATTGCACTACCGCCATCCCACGTTTTCCAGTCACAATTGCCTTTCATTCCTCACGACCTTCGCCCAGCCCTCAATCACAATTGAAACACTGCCAATCCCATGGACGGGGCAGCCGATTAGATGGAGAAGGCACTCTCTTTACATTGACCCACCATGAGACATCCACTTTTGGATTCTTGATAGAATCTAGGTGGTTTGTATATTGTCGAAAGGAGCAATGCCGCCTCTTATTGAAGAATCCTTGTACGGGGGAAATCTTACCTTTGCTTGGCAAAAATACATGGCATTTGTTGCCAGTCCATAATGTTGTACTTTACTTTTTTACAGGGTTTGCTTTCATCTATATGGAGGATGAGAGAGATGCTGAATATGCCATTCGGGGACTTGACCGAAAAGAATTTGGTCAAAAAGGACGCAGGCTACGTGTCGAATGGACAAAGCAAGAACGTGGTACTAGAAGACCTGGTGCATCAAGAAGATCTTCGACTAATACAAGACCTTCAAAGACCTTGTTCGTCATAAATTTTGATCCATATCACACAAGGACCAAGGATTTGGAGAGGCACTTTGATTCATATGGGAAAATCGTCAGTGTAAGGATCAGAAGAAATTTTGCATTTGTTCAATATGAGTCGCAAGAGGATGCTACCAGGGCATTGGAAGCTACAAACATGAGCAAGTTGATGGATCGAGTTATATCAGTGGAATATGCAGTTCGTGATGATGATGAAAGAAAAGATGGATTTAGCCCTGACCGGAGAAGTCGTGATAGGTCTCCAGACAGAGGTCGTGATAGAAGAAGGTCCCCAAGTCCCTACAAAAGAGAGAGAGGTAGCCCTGATTATGGTCGTGGCCCTAGCCCTGGCGCCTACCGGAGAGAGAGGGGCAGTCCTGATTATGGACGTGGAGCAAGTCCTTATAGAAGGGAGAGAGTAAGTCCTGACTATGGCTGTGGGCGCAGCCCGAGTCCATATAGGAGGGACAGGTCTGATCATGGCCGCGTCTCTAGTCATAGTCCTAGAAAAGAAAGGGTGAGTGCTGACCTTGTTCGTGATCGTAGCCGTAGCCGTAGTCCTTATGGAAGAGAGAAGATTGGGGTAGGCAATGGCCATGGTCCCAGTCGGAGCCCATATAAGAGAGAGAGGGGTAGTCCTGAAAATGGTCCCAGACGTAGTCCATATAAGAGAGAAAGGGATAGTCCTGAAATTGGCCGTCTCCCAAGCAGTAGTCCATATAAGAGAGAGAGGGCCAGTCCTGAAAATGGTCGTGGCCCCAGCGGAAGTCCTTATGAAAAGGGGAGGGCCAGTCTGGAAAATGGTCGCGTTGCAAGCCCAAATTCTCCGCCTGAAGCTAGGGACAGCCCCAACTATGGAGGGCCTGAAAGCCCCATGAATGAGAGATATAGCAGCCGTTCTCCACAAGCTGAGGAGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009892 GO:0009987 GO:0010033 GO:0010445 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0016604 GO:0016607 GO:0019222 GO:0031047 GO:0031050 GO:0031053 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043331 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 ko05168 map03040 map05168

Pfam Domains

Protein Families

RRM_1

Protein Analysis

519

Amino Acids

59.56

Weight (kDa)

10.05

Isoelectric Point (pI)

74.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	211 - 273	9.9e-14	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000932)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25500 AT4G25500 AT4G25500 AT4G25500 AT4G25500 AT4G25500 AT4G25500 AT4G25500 AT5G52040 AT5G52040 AT5G52040 AT5G52040 AT5G52040 AT5G52040 AT5G52040
fragaria_vesca	FvH4_7g13160 FvH4_7g13160 FvH4_7g13160 FvH4_7g13160 FvH4_7g13160 FvH4_7g13160 FvH4_7g28991 FvH4_7g28991 FvH4_7g28991 FvH4_7g28991 FvH4_7g28991
malus_domestica	MD01G1051400.v1.1 MD01G1196700.v1.1 MD07G1128300.v1.1 MD07G1264000.v1.1
prunus_persica	Prupe.2G154900_v2.0.a1 Prupe.2G154900_v2.0.a1 Prupe.2G154900_v2.0.a1 Prupe.2G290100_v2.0.a1 Prupe.2G290100_v2.0.a1 Prupe.2G290100_v2.0.a1 Prupe.2G290100_v2.0.a1
pyrus_communis	pycom01g07610 pycom07g12390 pycom07g24260
rosa_chinensis	RchiOBHm_Chr1g0352321 RchiOBHm_Chr1g0376701
rosa_laevigata	RLG00000026578 RLG00000028343
rosa_multiflora	Rmu_co8401165.1_g000001 Rmu_sc0009691.1_g000002
rosa_roxburghii	Rroxscaffold_4G00281870 Rroxscaffold_4G00303030
rosa_rugosa	Rorug01G0226500 Rorug01G0226600 Rorug01G0226700 Rorug01G0226700 Rorug01G0397600
rosa_samantha	Rh1AG241000 Rh1AG414700 Rh1BG211800 Rh1BG374100 Rh1CG224800 Rh1CG388000 Rh1DG238200 Rh1DG404900
rosa_wichuraiana	Rw1G020870 Rw1G020950 Rw1G036370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	986
AccBSI	CCGCTC	1 cut(s)	58
AccII	CGCG	2 cut(s)	1122, 1443
AciI	CCGC	7 cut(s)	18, 58, 132, 343, 1120, 1398, 1463
AclWI	GGATC	3 cut(s)	644, 728, 816
AcoI	YGGCCR	3 cut(s)	1117, 1228, 1330
AcsI	RAATTY	5 cut(s)	22, 518, 643, 730, 1456
AcuI	CTGAAG	1 cut(s)	1488
AcyI	GRCGYC	1 cut(s)	987
AfaI	GTAC	3 cut(s)	367, 432, 574
AflIII	ACRYGT	1 cut(s)	544
AgsI	TTSAA	5 cut(s)	29, 205, 355, 624, 746
AjiI	CACGTC	1 cut(s)	1025
AjnI	CCWGG	3 cut(s)	583, 770, 982
AluBI	AGCT	3 cut(s)	785, 1472, 1544
AluI	AGCT	3 cut(s)	785, 1472, 1544
Alw26I	GTCTC	4 cut(s)	272, 900, 1129, 1340
AlwI	GGATC	3 cut(s)	644, 728, 816
Ama87I	CYCGRG	1 cut(s)	1084
AoxI	GGCC	9 cut(s)	5, 973, 1117, 1228, 1330, 1368, 1390, 1422, 1496
ApeKI	GCWGC	3 cut(s)	231, 1080, 1527
ApoI	RAATTY	5 cut(s)	22, 518, 643, 730, 1456
ArsI	GACNNNNNNTTYG	2 cut(s)	658, 690
Asp700I	GAANNNNTTC	1 cut(s)	601
AspLEI	GCGC	2 cut(s)	989, 1080
AspS9I	GGNCC	9 cut(s)	666, 924, 974, 1235, 1283, 1368, 1391, 1422, 1496
AsuHPI	GGTGA	1 cut(s)	1165
AvaI	CYCGRG	1 cut(s)	1084
AvaII	GGWCC	4 cut(s)	666, 924, 1235, 1283
BalI	TGGCCA	1 cut(s)	1230
BanI	GGYRCC	1 cut(s)	986
BanII	GRGCYC	1 cut(s)	1250
BbsI	GAAGAC	1 cut(s)	586
BbvCI	CCTCAGC	1 cut(s)	1545
BbvI	GCAGC	3 cut(s)	243, 1092, 1539
BccI	CCATC	4 cut(s)	143, 236, 799, 854
BceAI	ACGGC	4 cut(s)	1167, 1173, 1317, 1515
BciT130I	CCWGG	3 cut(s)	585, 772, 984
BclI	TGATCA	1 cut(s)	1111
BcoDI	GTCTC	4 cut(s)	272, 900, 1129, 1340
BfaI	CTAG	6 cut(s)	309, 576, 978, 1128, 1140, 1473
BfoI	RGCGCY	1 cut(s)	990
BglII	AGATCT	1 cut(s)	599
BisI	GCNGC	6 cut(s)	59, 232, 343, 1081, 1120, 1528
BlsI	GCNGC	6 cut(s)	60, 233, 344, 1082, 1121, 1529
Bme1390I	CCNGG	3 cut(s)	585, 772, 984
Bme18I	GGWCC	4 cut(s)	666, 924, 1235, 1283
BmeT110I	CYCGRG	1 cut(s)	1084
BmgBI	CACGTC	1 cut(s)	1025
BmgT120I	GGNCC	9 cut(s)	666, 924, 974, 1235, 1283, 1368, 1391, 1422, 1496
BmiI	GGNNCC	6 cut(s)	926, 988, 1237, 1247, 1285, 1393
BmrFI	CCNGG	3 cut(s)	585, 772, 984
BmrI	ACTGGG	1 cut(s)	1233
BmsI	GCATC	4 cut(s)	25, 472, 599, 754
BmuI	ACTGGG	1 cut(s)	1233
BoxI	GACNNNNGTC	1 cut(s)	906
BpiI	GAAGAC	1 cut(s)	586
BpmI	CTGGAG	1 cut(s)	882
Bpu10I	CCTNAGC	1 cut(s)	1545
BsaAI	YACGTR	1 cut(s)	545
BsaBI	GATNNNNATC	1 cut(s)	654
BsaHI	GRCGYC	1 cut(s)	987
BsaI	GGTCTC	1 cut(s)	900
BsaJI	CCNNGG	5 cut(s)	220, 669, 771, 982, 1231
BsaWI	WCCGGW	2 cut(s)	876, 993
BsaXI	ACNNNNNCTCC	6 cut(s)	47, 77, 871, 901, 1411, 1441
Bse1I	ACTGG	5 cut(s)	149, 416, 1239, 1371, 1425
Bse3DI	GCAATG	2 cut(s)	344, 1231
Bse8I	GATNNNNATC	1 cut(s)	654
BseBI	CCWGG	3 cut(s)	585, 772, 984
BseDI	CCNNGG	5 cut(s)	220, 669, 771, 982, 1231
BseGI	GGATG	4 cut(s)	135, 281, 478, 769
BseJI	GATNNNNATC	1 cut(s)	654
BseMI	GCAATG	2 cut(s)	344, 1231
BseMII	CTCAG	1 cut(s)	1536
BseNI	ACTGG	5 cut(s)	149, 416, 1239, 1371, 1425
BseXI	GCAGC	3 cut(s)	243, 1092, 1539
BseYI	CCCAGC	2 cut(s)	185, 1394
Bsh1236I	CGCG	2 cut(s)	1122, 1443
BshFI	GGCC	9 cut(s)	7, 975, 1119, 1230, 1332, 1370, 1392, 1424, 1498
BshNI	GGYRCC	1 cut(s)	986
BsiHKCI	CYCGRG	1 cut(s)	1084
BsiSI	CCGG	2 cut(s)	877, 994
BslFI	GGGAC	7 cut(s)	516, 910, 918, 1115, 1221, 1269, 1490
BsmAI	GTCTC	4 cut(s)	272, 900, 1129, 1340
BsmBI	CGTCTC	2 cut(s)	1129, 1340
BsmFI	GGGAC	7 cut(s)	516, 910, 918, 1115, 1221, 1269, 1490
BsnI	GGCC	9 cut(s)	7, 975, 1119, 1230, 1332, 1370, 1392, 1424, 1498
Bso31I	GGTCTC	1 cut(s)	900
BsoBI	CYCGRG	1 cut(s)	1084
Bsp1286I	GDGCHC	1 cut(s)	1250
Bsp143I	GATC	7 cut(s)	114, 599, 649, 720, 808, 1111, 1174
Bsp19I	CCATGG	2 cut(s)	220, 1231
BspACI	CCGC	7 cut(s)	18, 58, 132, 343, 1120, 1398, 1463
BspANI	GGCC	9 cut(s)	7, 975, 1119, 1230, 1332, 1370, 1392, 1424, 1498
BspCNI	CTCAG	1 cut(s)	1537
BspFNI	CGCG	2 cut(s)	1122, 1443
BspLI	GGNNCC	6 cut(s)	926, 988, 1237, 1247, 1285, 1393
BspPI	GGATC	3 cut(s)	644, 728, 816
BspT107I	GGYRCC	1 cut(s)	986
BspTNI	GGTCTC	1 cut(s)	900
BsrBI	CCGCTC	1 cut(s)	58
BsrDI	GCAATG	2 cut(s)	344, 1231
BsrI	ACTGG	5 cut(s)	149, 416, 1239, 1371, 1425
BssECI	CCNNGG	5 cut(s)	220, 669, 771, 982, 1231
BssMI	GATC	7 cut(s)	114, 599, 649, 720, 808, 1111, 1174
BssNI	GRCGYC	1 cut(s)	987
BssT1I	CCWWGG	3 cut(s)	220, 669, 1231
Bst2UI	CCWGG	3 cut(s)	585, 772, 984
Bst6I	CTCTTC	1 cut(s)	1198
BstACI	GRCGYC	1 cut(s)	987
BstAPI	GCANNNNNTGC	1 cut(s)	412
BstBAI	YACGTR	1 cut(s)	545
BstC8I	GCNNGC	2 cut(s)	539, 1450
BstDEI	CTNAG	1 cut(s)	1545
BstDSI	CCRYGG	2 cut(s)	220, 1231
BstF5I	GGATG	4 cut(s)	135, 281, 478, 769
BstFNI	CGCG	2 cut(s)	1122, 1443
BstH2I	RGCGCY	1 cut(s)	990
BstHHI	GCGC	2 cut(s)	989, 1080
BstKTI	GATC	7 cut(s)	117, 602, 652, 723, 811, 1114, 1177
BstMAI	GTCTC	4 cut(s)	272, 900, 1129, 1340
BstMBI	GATC	7 cut(s)	114, 599, 649, 720, 808, 1111, 1174
BstMWI	GCNNNNNNNGC	6 cut(s)	412, 491, 773, 782, 1077, 1449
BstNI	CCWGG	3 cut(s)	585, 772, 984
BstPAI	GACNNNNGTC	1 cut(s)	906
BstSCI	CCNGG	3 cut(s)	583, 770, 982
BstUI	CGCG	2 cut(s)	1122, 1443
BstV1I	GCAGC	3 cut(s)	243, 1092, 1539
BstV2I	GAAGAC	1 cut(s)	586
BstX2I	RGATCY	1 cut(s)	599
BstXI	CCANNNNNNTGG	3 cut(s)	221, 676, 778
BstYI	RGATCY	1 cut(s)	599
BsuRI	GGCC	9 cut(s)	7, 975, 1119, 1230, 1332, 1370, 1392, 1424, 1498
BtgI	CCRYGG	2 cut(s)	220, 1231
BtrI	CACGTC	1 cut(s)	1025
BtsCI	GGATG	4 cut(s)	135, 281, 478, 769
BtsI	GCAGTG	1 cut(s)	208
BtsIMutI	CAGTG	3 cut(s)	208, 718, 828
Cac8I	GCNNGC	2 cut(s)	539, 1450
CfoI	GCGC	2 cut(s)	989, 1080
Cfr13I	GGNCC	9 cut(s)	666, 924, 974, 1235, 1283, 1368, 1391, 1422, 1496
CseI	GACGC	2 cut(s)	543, 1111
CsiI	ACCWGGT	1 cut(s)	583
Csp6I	GTAC	3 cut(s)	366, 431, 573
CviAII	CATG	7 cut(s)	221, 275, 402, 793, 1115, 1232, 1510
CviQI	GTAC	3 cut(s)	366, 431, 573
DdeI	CTNAG	1 cut(s)	1545
DinI	GGCGCC	1 cut(s)	988
DpnI	GATC	7 cut(s)	116, 601, 651, 722, 810, 1113, 1176
DpnII	GATC	7 cut(s)	114, 599, 649, 720, 808, 1111, 1174
EaeI	YGGCCR	3 cut(s)	1117, 1228, 1330
Eam1104I	CTCTTC	1 cut(s)	1198
EarI	CTCTTC	1 cut(s)	1198
EciI	GGCGGA	1 cut(s)	1452
Eco130I	CCWWGG	3 cut(s)	220, 669, 1231
Eco24I	GRGCYC	1 cut(s)	1250
Eco31I	GGTCTC	1 cut(s)	900
Eco47I	GGWCC	4 cut(s)	666, 924, 1235, 1283
Eco57I	CTGAAG	1 cut(s)	1488
Eco88I	CYCGRG	1 cut(s)	1084
EcoO109I	RGGNCCY	2 cut(s)	924, 1496
EcoRII	CCWGG	3 cut(s)	583, 770, 982
EcoT14I	CCWWGG	3 cut(s)	220, 669, 1231
EcoT38I	GRGCYC	1 cut(s)	1250
EgeI	GGCGCC	1 cut(s)	988
EheI	GGCGCC	1 cut(s)	988
ErhI	CCWWGG	3 cut(s)	220, 669, 1231
Esp3I	CGTCTC	2 cut(s)	1129, 1340
FaeI	CATG	7 cut(s)	224, 278, 405, 796, 1118, 1235, 1513
FalI	AAGNNNNNCTT	2 cut(s)	586, 618
FaqI	GGGAC	7 cut(s)	516, 910, 918, 1115, 1221, 1269, 1490
FatI	CATG	7 cut(s)	220, 274, 401, 792, 1114, 1231, 1509
FauI	CCCGC	1 cut(s)	11
FauNDI	CATATG	1 cut(s)	697
FbaI	TGATCA	1 cut(s)	1111
Fnu4HI	GCNGC	6 cut(s)	59, 232, 343, 1081, 1120, 1528
FokI	GGATG	4 cut(s)	122, 268, 485, 776
FriOI	GRGCYC	1 cut(s)	1250
Fsp4HI	GCNGC	6 cut(s)	59, 232, 343, 1081, 1120, 1528
FspBI	CTAG	6 cut(s)	309, 576, 978, 1128, 1140, 1473
GlaI	GCGC	2 cut(s)	988, 1079
GluI	GCNGC	6 cut(s)	59, 232, 343, 1081, 1120, 1528
GsaI	CCCAGC	2 cut(s)	189, 1398
GsuI	CTGGAG	1 cut(s)	882
HaeII	RGCGCY	1 cut(s)	990
HaeIII	GGCC	9 cut(s)	7, 975, 1119, 1230, 1332, 1370, 1392, 1424, 1498
HapII	CCGG	2 cut(s)	877, 994
HgaI	GACGC	2 cut(s)	543, 1111
HhaI	GCGC	2 cut(s)	989, 1080
Hin1I	GRCGYC	1 cut(s)	987
Hin1II	CATG	7 cut(s)	224, 278, 405, 796, 1118, 1235, 1513
Hin6I	GCGC	2 cut(s)	987, 1078
HinP1I	GCGC	2 cut(s)	987, 1078
HinfI	GANTC	6 cut(s)	294, 305, 358, 692, 752, 1087
HpaII	CCGG	2 cut(s)	877, 994
HphI	GGTGA	1 cut(s)	1165
Hpy188I	TCNGA	4 cut(s)	114, 725, 1111, 1245
HpyAV	CCTTC	5 cut(s)	189, 242, 630, 915, 1038
HpyCH4IV	ACGT	5 cut(s)	142, 544, 568, 1024, 1291
HpyCH4V	TGCA	6 cut(s)	120, 126, 590, 737, 833, 1448
HpyF10VI	GCNNNNNNNGC	6 cut(s)	412, 491, 773, 782, 1077, 1449
HpyF3I	CTNAG	1 cut(s)	1545
HpySE526I	ACGT	5 cut(s)	142, 544, 568, 1024, 1291
Hsp92I	GRCGYC	1 cut(s)	987
Hsp92II	CATG	7 cut(s)	224, 278, 405, 796, 1118, 1235, 1513
HspAI	GCGC	2 cut(s)	987, 1078
KasI	GGCGCC	1 cut(s)	986
Ksp22I	TGATCA	1 cut(s)	1111
Kzo9I	GATC	7 cut(s)	114, 599, 649, 720, 808, 1111, 1174
LmnI	GCTCC	4 cut(s)	55, 334, 1028, 1245
Lsp1109I	GCAGC	3 cut(s)	243, 1092, 1539
LweI	GCATC	4 cut(s)	25, 472, 599, 754
MabI	ACCWGGT	1 cut(s)	583
MaeI	CTAG	6 cut(s)	309, 576, 978, 1128, 1140, 1473
MaeII	ACGT	5 cut(s)	142, 544, 568, 1024, 1291
MaeIII	GTNAC	2 cut(s)	106, 151
MalI	GATC	7 cut(s)	116, 601, 651, 722, 810, 1113, 1176
MbiI	CCGCTC	1 cut(s)	58
MboI	GATC	7 cut(s)	114, 599, 649, 720, 808, 1111, 1174
MboII	GAAGA	8 cut(s)	367, 591, 594, 609, 738, 930, 1215, 1222
MfeI	CAATTG	3 cut(s)	121, 156, 200
MflI	RGATCY	1 cut(s)	599
MhlI	GDGCHC	1 cut(s)	1250
MlsI	TGGCCA	1 cut(s)	1230
MluNI	TGGCCA	1 cut(s)	1230
Mly113I	GGCGCC	1 cut(s)	987
MlyI	GAGTC	2 cut(s)	761, 1096
MmeI	TCCRAC	1 cut(s)	1223
Mox20I	TGGCCA	1 cut(s)	1230
MroXI	GAANNNNTTC	1 cut(s)	601
MscI	TGGCCA	1 cut(s)	1230
MslI	CAYNNNNRTG	1 cut(s)	464
Msp20I	TGGCCA	1 cut(s)	1230
MspA1I	CMGCKG	1 cut(s)	1398
MspI	CCGG	2 cut(s)	877, 994
MspR9I	CCNGG	3 cut(s)	585, 772, 984
MunI	CAATTG	3 cut(s)	121, 156, 200
MvaI	CCWGG	3 cut(s)	585, 772, 984
MvnI	CGCG	2 cut(s)	1122, 1443
MwoI	GCNNNNNNNGC	6 cut(s)	412, 491, 773, 782, 1077, 1449
NarI	GGCGCC	1 cut(s)	987
NcoI	CCATGG	2 cut(s)	220, 1231
NdeI	CATATG	1 cut(s)	697
NdeII	GATC	7 cut(s)	114, 599, 649, 720, 808, 1111, 1174
NlaIII	CATG	7 cut(s)	224, 278, 405, 796, 1118, 1235, 1513
NlaIV	GGNNCC	6 cut(s)	926, 988, 1237, 1247, 1285, 1393
NmuCI	GTSAC	2 cut(s)	106, 151
PcsI	WCGNNNNNNNCGW	2 cut(s)	232, 541
PdmI	GAANNNNTTC	1 cut(s)	601
PfeI	GAWTC	4 cut(s)	294, 305, 358, 692
PflFI	GACNNNGTC	1 cut(s)	1293
PkrI	GCNGC	6 cut(s)	60, 233, 344, 1082, 1121, 1529
PleI	GAGTC	2 cut(s)	760, 1095
PluTI	GGCGCC	1 cut(s)	990
PpsI	GAGTC	2 cut(s)	760, 1095
Ppu21I	YACGTR	1 cut(s)	545
PpuMI	RGGWCCY	1 cut(s)	924
PshAI	GACNNNNGTC	1 cut(s)	906
Psp5II	RGGWCCY	1 cut(s)	924
Psp6I	CCWGG	3 cut(s)	583, 770, 982
PspFI	CCCAGC	2 cut(s)	185, 1394
PspGI	CCWGG	3 cut(s)	583, 770, 982
PspN4I	GGNNCC	6 cut(s)	926, 988, 1237, 1247, 1285, 1393
PspPI	GGNCC	9 cut(s)	666, 924, 974, 1235, 1283, 1368, 1391, 1422, 1496
PspPPI	RGGWCCY	1 cut(s)	924
PsuI	RGATCY	1 cut(s)	599
PsyI	GACNNNGTC	1 cut(s)	1293
RsaI	GTAC	3 cut(s)	367, 432, 574
RsaNI	GTAC	3 cut(s)	366, 431, 573
RseI	CAYNNNNRTG	1 cut(s)	464
SatI	GCNGC	6 cut(s)	59, 232, 343, 1081, 1120, 1528
Sau3AI	GATC	7 cut(s)	114, 599, 649, 720, 808, 1111, 1174
Sau96I	GGNCC	9 cut(s)	666, 924, 974, 1235, 1283, 1368, 1391, 1422, 1496
SchI	GAGTC	2 cut(s)	761, 1096
ScrFI	CCNGG	3 cut(s)	585, 772, 984
SduI	GDGCHC	1 cut(s)	1250
SexAI	ACCWGGT	1 cut(s)	583
SfaNI	GCATC	4 cut(s)	25, 472, 599, 754
SfoI	GGCGCC	1 cut(s)	988
SinI	GGWCC	4 cut(s)	666, 924, 1235, 1283
SmiMI	CAYNNNNRTG	1 cut(s)	464
SsiI	CCGC	7 cut(s)	18, 58, 132, 343, 1120, 1398, 1463
SspDI	GGCGCC	1 cut(s)	986
SspMI	CTAG	6 cut(s)	309, 576, 978, 1128, 1140, 1473
StyD4I	CCNGG	3 cut(s)	583, 770, 982
StyI	CCWWGG	3 cut(s)	220, 669, 1231
TaiI	ACGT	5 cut(s)	145, 547, 571, 1027, 1294
TaqI	TCGA	6 cut(s)	40, 93, 328, 549, 605, 811
TaqII	GACCGA	1 cut(s)	525
TatI	WGTACW	1 cut(s)	430
TauI	GCSGC	3 cut(s)	61, 345, 1122
TfiI	GAWTC	4 cut(s)	294, 305, 358, 692
TscAI	CASTG	3 cut(s)	215, 718, 828
TseFI	GTSAC	2 cut(s)	106, 151
TseI	GCWGC	3 cut(s)	231, 1080, 1527
Tsp45I	GTSAC	2 cut(s)	106, 151
TspDTI	ATGAA	8 cut(s)	63, 113, 155, 448, 684, 864, 1425, 1526
TspRI	CASTG	3 cut(s)	215, 718, 828
Tth111I	GACNNNGTC	1 cut(s)	1293
VpaK11BI	GGWCC	4 cut(s)	666, 924, 1235, 1283
XapI	RAATTY	5 cut(s)	22, 518, 643, 730, 1456
XmnI	GAANNNNTTC	1 cut(s)	601
XspI	CTAG	6 cut(s)	309, 576, 978, 1128, 1140, 1473

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.