Prupe.2G290100_v2.0.a1

Arginine serine-rich-splicing factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
28418325 .. 28422819
4495 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G290100.2

Sequence Viewer

Length: 1212 bp
ATGAGGCCCATTTTTTGTGGGAATTTTGAATATGATGCTCGACAAAATGAATTGGAGCGGCTTTTCGGTAGATATGGGAAAGTTGACAGAGTGGATATGAAGTCTGGGTTTGCTTTTATCTACATGGAAGATGAGAGAGATGCTGAGTATGCTATTCGGGGACTTGATCGGAAAGAATTTGGTAGAAAAGGACGCAGGCTTCGTGTTGAATGGACGAAGGTAGCAAATCATGAACGTGGTACTAGAAGACCGGGTGCTTCAAGAAGATCTTCGACTAATACAAGACCTTCAAAGACCTTGTTTGTTATTAATTTTGATCCGTATCACACTAGGACCAAGGATTTGGAGAGGCACTTTGATCCATATGGGAAAATTGTGAGTGTTAGGATCAGAAGAAATTTCGCATTTGTTCAGTATGAGTCACAAGAAGATGCTACTAGGGCATTGGAAGCTACGAACATGAGCAAGCTGATGGATCGAGTTATATCAGTGGAGTATGCAGTTCGTGATGATGATGAAAGAAGAGACGGCTTTAGTCCTGATAGGAGAAGTCGTGATAGGTCACTAGACAGAGGCCGTGATAGAAGAAGATCCCCAAGTCCCTACAAAAGAGAGAGGGGTAGCCCTGATTATGGCCGTGGCCCTAGCCCTGGTCCCTACCGCAGAGAGAGGGGTAGTCCTGATTATGGCCGTGGCCCAAGTCCTTATCGAAGGGAGAGAGTAAGTCCAGACTATGGCCGAGGCCGCAGCCCAAGTCCCTATCGAAGGGAGAGATCTGATCATGGCCGGGTCTCTAGTCGCAGTCCCCGGAAAGAGAGGGTGAGTGCAGACCGTATCCGTGATCGTAGCCGTAGTCCTTATGGAAGAGAGAGGCCTGGGGCTGACAATGGCCATGCTCCCATCCGTAGTCCATATAAGAGAGACAGGGACAGTCCTGAAAATGGTGCCATCGAGAGTCCATATAAGAGAGATAGGGCCAGTCCTGAAAATGGCGCCATCCAGAGTCCATATAAGAGAGATAGGAGTAGTCCTGAAAATGGTCGGGGCCCCAGCAGCAGTCCTTATGAAAGAGAGAGGGTCAGCCCTGAACATGGTCACGGTCCAAGCCCCAATTCTGTGCCTGAAGCTAGGGGGGACAGCCCTAACTATGGTGGGCCTGAAAGCCCCATGCAGGAGAGATATAGCAGCCGTTCACCACCAGCTGAGGAATGA

Protein Analysis

404

Amino Acids

46.71

Weight (kDa)

10.19

Isoelectric Point (pI)

78.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 944, 992
AccB7I CCANNNNNTGG 1 cut(s) 734
AccBSI CCGCTC 1 cut(s) 58
AciI CCGC 3 cut(s) 58, 661, 745
AclWI GGATC 5 cut(s) 311, 353, 395, 483, 585
AcoI YGGCCR 5 cut(s) 634, 688, 736, 784, 889
AcsI RAATTY 3 cut(s) 22, 176, 397
AcuI CTGAAG 1 cut(s) 1143
AcyI GRCGYC 1 cut(s) 993
AfaI GTAC 1 cut(s) 241
AgsI TTSAA 4 cut(s) 29, 209, 261, 291
AjnI CCWGG 2 cut(s) 649, 874
AjuI GAANNNNNNNTTGG 2 cut(s) 1096, 1128
AluBI AGCT 4 cut(s) 452, 469, 1127, 1202
AluI AGCT 4 cut(s) 452, 469, 1127, 1202
Alw26I GTCTC 3 cut(s) 519, 796, 915
AlwI GGATC 5 cut(s) 311, 353, 395, 483, 585
ApaI GGGCCC 1 cut(s) 1049
ApeKI GCWGC 3 cut(s) 747, 1053, 1185
ApoI RAATTY 3 cut(s) 22, 176, 397
ArsI GACNNNNNNTTYG 4 cut(s) 183, 215, 325, 357
AseI ATTAAT 1 cut(s) 309
Asp700I GAANNNNTTC 1 cut(s) 268
AspLEI GCGC 1 cut(s) 995
AsuC2I CCSGG 3 cut(s) 252, 788, 808
AsuHPI GGTGA 2 cut(s) 832, 1185
AvaII GGWCC 3 cut(s) 333, 653, 1100
BaeGI GKGCMC 1 cut(s) 1049
BalI TGGCCA 1 cut(s) 891
BanI GGYRCC 2 cut(s) 944, 992
BanII GRGCYC 1 cut(s) 1049
BbsI GAAGAC 1 cut(s) 253
BbvCI CCTCAGC 1 cut(s) 1203
BbvI GCAGC 3 cut(s) 759, 1065, 1197
BccI CCATC 4 cut(s) 466, 908, 956, 1004
BceAI ACGGC 6 cut(s) 544, 561, 621, 675, 834, 1173
BciT130I CCWGG 2 cut(s) 651, 876
BciVI GTATCC 1 cut(s) 845
BclI TGATCA 1 cut(s) 778
BcnI CCSGG 3 cut(s) 252, 788, 808
BcoDI GTCTC 3 cut(s) 519, 796, 915
BfaI CTAG 7 cut(s) 243, 330, 438, 566, 645, 795, 1128
BfoI RGCGCY 1 cut(s) 996
BfuI GTATCC 1 cut(s) 845
BglII AGATCT 2 cut(s) 266, 773
BisI GCNGC 5 cut(s) 59, 745, 748, 1054, 1186
BlsI GCNGC 5 cut(s) 60, 746, 749, 1055, 1187
Bme1390I CCNGG 5 cut(s) 252, 651, 788, 808, 876
Bme18I GGWCC 3 cut(s) 333, 653, 1100
BmiI GGNNCC 6 cut(s) 655, 946, 994, 1046, 1047, 1048
BmrFI CCNGG 5 cut(s) 252, 651, 788, 808, 876
BmsI GCATC 3 cut(s) 25, 130, 421
BpiI GAAGAC 1 cut(s) 253
Bpu10I CCTNAGC 1 cut(s) 1203
BpuMI CCSGG 3 cut(s) 252, 788, 808
BsaBI GATNNNNATC 1 cut(s) 321
BsaHI GRCGYC 1 cut(s) 993
BsaI GGTCTC 1 cut(s) 796
BsaJI CCNNGG 7 cut(s) 336, 637, 649, 691, 739, 806, 875
BsaXI ACNNNNNCTCC 2 cut(s) 538, 568
Bse1I ACTGG 1 cut(s) 978
Bse8I GATNNNNATC 1 cut(s) 321
BseBI CCWGG 2 cut(s) 651, 876
BseDI CCNNGG 7 cut(s) 336, 637, 649, 691, 739, 806, 875
BseGI GGATG 2 cut(s) 900, 996
BseJI GATNNNNATC 1 cut(s) 321
BseMII CTCAG 2 cut(s) 135, 1194
BseNI ACTGG 1 cut(s) 978
BseSI GKGCMC 1 cut(s) 1049
BseXI GCAGC 3 cut(s) 759, 1065, 1197
BseYI CCCAGC 1 cut(s) 1049
BsgI GTGCAG 1 cut(s) 846
BshNI GGYRCC 2 cut(s) 944, 992
BsiSI CCGG 3 cut(s) 251, 787, 808
BslFI GGGAC 7 cut(s) 174, 585, 639, 741, 789, 941, 1148
BsmAI GTCTC 3 cut(s) 519, 796, 915
BsmBI CGTCTC 1 cut(s) 519
BsmFI GGGAC 7 cut(s) 174, 585, 639, 741, 789, 941, 1148
Bso31I GGTCTC 1 cut(s) 796
Bsp120I GGGCCC 1 cut(s) 1045
Bsp1286I GDGCHC 1 cut(s) 1049
BspACI CCGC 3 cut(s) 58, 661, 745
BspCNI CTCAG 2 cut(s) 136, 1195
BspHI TCATGA 1 cut(s) 229
BspLI GGNNCC 6 cut(s) 655, 946, 994, 1046, 1047, 1048
BspPI GGATC 5 cut(s) 311, 353, 395, 483, 585
BspT107I GGYRCC 2 cut(s) 944, 992
BspTNI GGTCTC 1 cut(s) 796
BsrBI CCGCTC 1 cut(s) 58
BsrI ACTGG 1 cut(s) 978
BssECI CCNNGG 7 cut(s) 336, 637, 649, 691, 739, 806, 875
BssNI GRCGYC 1 cut(s) 993
BssT1I CCWWGG 1 cut(s) 336
Bst2UI CCWGG 2 cut(s) 651, 876
Bst4CI ACNGT 3 cut(s) 833, 932, 1100
Bst6I CTCTTC 2 cut(s) 517, 859
BstACI GRCGYC 1 cut(s) 993
BstC8I GCNNGC 2 cut(s) 197, 467
BstDEI CTNAG 2 cut(s) 144, 1203
BstDSI CCRYGG 2 cut(s) 637, 691
BstENI CCTNNNNNAGG 1 cut(s) 763
BstF5I GGATG 2 cut(s) 900, 996
BstH2I RGCGCY 1 cut(s) 996
BstHHI GCGC 1 cut(s) 995
BstMAI GTCTC 3 cut(s) 519, 796, 915
BstMWI GCNNNNNNNGC 5 cut(s) 149, 440, 449, 744, 1053
BstNI CCWGG 2 cut(s) 651, 876
BstSCI CCNGG 5 cut(s) 250, 649, 786, 806, 874
BstSLI GKGCMC 1 cut(s) 1049
BstV1I GCAGC 3 cut(s) 759, 1065, 1197
BstV2I GAAGAC 1 cut(s) 253
BstX2I RGATCY 3 cut(s) 266, 590, 773
BstXI CCANNNNNNTGG 1 cut(s) 343
BstYI RGATCY 3 cut(s) 266, 590, 773
BsuI GTATCC 1 cut(s) 845
BtgI CCRYGG 2 cut(s) 637, 691
BtsCI GGATG 2 cut(s) 900, 996
BtsIMutI CAGTG 1 cut(s) 495
Cac8I GCNNGC 2 cut(s) 197, 467
CciI TCATGA 1 cut(s) 229
CfoI GCGC 1 cut(s) 995
CseI GACGC 1 cut(s) 201
Csp6I GTAC 1 cut(s) 240
CviAII CATG 7 cut(s) 124, 230, 460, 782, 893, 1091, 1168
CviQI GTAC 1 cut(s) 240
DdeI CTNAG 2 cut(s) 144, 1203
DinI GGCGCC 1 cut(s) 994
EaeI YGGCCR 5 cut(s) 634, 688, 736, 784, 889
Eam1104I CTCTTC 2 cut(s) 517, 859
EarI CTCTTC 2 cut(s) 517, 859
Eco130I CCWWGG 1 cut(s) 336
Eco147I AGGCCT 1 cut(s) 874
Eco24I GRGCYC 1 cut(s) 1049
Eco31I GGTCTC 1 cut(s) 796
Eco47I GGWCC 3 cut(s) 333, 653, 1100
Eco57I CTGAAG 1 cut(s) 1143
EcoNI CCTNNNNNAGG 1 cut(s) 763
EcoO109I RGGNCCY 2 cut(s) 1045, 1046
EcoRII CCWGG 2 cut(s) 649, 874
EcoT14I CCWWGG 1 cut(s) 336
EcoT38I GRGCYC 1 cut(s) 1049
EgeI GGCGCC 1 cut(s) 994
EheI GGCGCC 1 cut(s) 994
ErhI CCWWGG 1 cut(s) 336
Esp3I CGTCTC 1 cut(s) 519
FaeI CATG 7 cut(s) 127, 233, 463, 785, 896, 1094, 1171
FalI AAGNNNNNCTT 2 cut(s) 253, 285
FaqI GGGAC 7 cut(s) 174, 585, 639, 741, 789, 941, 1148
FatI CATG 7 cut(s) 123, 229, 459, 781, 892, 1090, 1167
FauNDI CATATG 1 cut(s) 364
FbaI TGATCA 1 cut(s) 778
Fnu4HI GCNGC 5 cut(s) 59, 745, 748, 1054, 1186
FokI GGATG 2 cut(s) 887, 983
FriOI GRGCYC 1 cut(s) 1049
Fsp4HI GCNGC 5 cut(s) 59, 745, 748, 1054, 1186
FspBI CTAG 7 cut(s) 243, 330, 438, 566, 645, 795, 1128
GlaI GCGC 1 cut(s) 994
GluI GCNGC 5 cut(s) 59, 745, 748, 1054, 1186
GsaI CCCAGC 1 cut(s) 1053
HaeII RGCGCY 1 cut(s) 996
HapII CCGG 3 cut(s) 251, 787, 808
HgaI GACGC 1 cut(s) 201
HhaI GCGC 1 cut(s) 995
Hin1I GRCGYC 1 cut(s) 993
Hin1II CATG 7 cut(s) 127, 233, 463, 785, 896, 1094, 1171
Hin6I GCGC 1 cut(s) 993
HinP1I GCGC 1 cut(s) 993
HincII GTYRAC 1 cut(s) 85
HindII GTYRAC 1 cut(s) 85
HinfI GANTC 3 cut(s) 419, 955, 1003
HpaII CCGG 3 cut(s) 251, 787, 808
HphI GGTGA 2 cut(s) 832, 1185
Hpy166II GTNNAC 2 cut(s) 85, 1193
Hpy188I TCNGA 3 cut(s) 171, 392, 778
Hpy8I GTNNAC 2 cut(s) 85, 1193
HpyAV CCTTC 4 cut(s) 211, 297, 705, 759
HpyCH4III ACNGT 3 cut(s) 833, 932, 1100
HpyCH4IV ACGT 1 cut(s) 235
HpyCH4V TGCA 3 cut(s) 500, 827, 1171
HpyF10VI GCNNNNNNNGC 5 cut(s) 149, 440, 449, 744, 1053
HpyF3I CTNAG 2 cut(s) 144, 1203
HpySE526I ACGT 1 cut(s) 235
Hsp92I GRCGYC 1 cut(s) 993
Hsp92II CATG 7 cut(s) 127, 233, 463, 785, 896, 1094, 1171
HspAI GCGC 1 cut(s) 993
KasI GGCGCC 1 cut(s) 992
Ksp22I TGATCA 1 cut(s) 778
LmnI GCTCC 2 cut(s) 55, 901
Lsp1109I GCAGC 3 cut(s) 759, 1065, 1197
LweI GCATC 3 cut(s) 25, 130, 421
MaeI CTAG 7 cut(s) 243, 330, 438, 566, 645, 795, 1128
MaeII ACGT 1 cut(s) 235
MaeIII GTNAC 3 cut(s) 420, 561, 1094
MbiI CCGCTC 1 cut(s) 58
MflI RGATCY 3 cut(s) 266, 590, 773
MhlI GDGCHC 1 cut(s) 1049
MlsI TGGCCA 1 cut(s) 891
MluCI AATT 7 cut(s) 22, 50, 176, 310, 372, 397, 1111
MluNI TGGCCA 1 cut(s) 891
Mly113I GGCGCC 1 cut(s) 993
MlyI GAGTC 3 cut(s) 428, 964, 1012
MnlI CCTC 9 cut(s) 342, 566, 609, 663, 734, 810, 864, 1068, 1198
Mox20I TGGCCA 1 cut(s) 891
MroXI GAANNNNTTC 1 cut(s) 268
MscI TGGCCA 1 cut(s) 891
MseI TTAA 1 cut(s) 309
MslI CAYNNNNRTG 1 cut(s) 234
Msp20I TGGCCA 1 cut(s) 891
MspA1I CMGCKG 1 cut(s) 1202
MspI CCGG 3 cut(s) 251, 787, 808
MspR9I CCNGG 5 cut(s) 252, 651, 788, 808, 876
MvaI CCWGG 2 cut(s) 651, 876
MwoI GCNNNNNNNGC 5 cut(s) 149, 440, 449, 744, 1053
NarI GGCGCC 1 cut(s) 993
NciI CCSGG 3 cut(s) 252, 788, 808
NdeI CATATG 1 cut(s) 364
NlaIII CATG 7 cut(s) 127, 233, 463, 785, 896, 1094, 1171
NlaIV GGNNCC 6 cut(s) 655, 946, 994, 1046, 1047, 1048
NmeAIII GCCGAG 1 cut(s) 764
NmuCI GTSAC 3 cut(s) 420, 561, 1094
PagI TCATGA 1 cut(s) 229
PceI AGGCCT 1 cut(s) 874
PcsI WCGNNNNNNNCGW 1 cut(s) 199
PdmI GAANNNNTTC 1 cut(s) 268
PflMI CCANNNNNTGG 1 cut(s) 734
PkrI GCNGC 5 cut(s) 60, 746, 749, 1055, 1187
PleI GAGTC 3 cut(s) 427, 963, 1011
PluTI GGCGCC 1 cut(s) 996
PpsI GAGTC 3 cut(s) 427, 963, 1011
PshBI ATTAAT 1 cut(s) 309
Psp6I CCWGG 2 cut(s) 649, 874
PspFI CCCAGC 1 cut(s) 1049
PspGI CCWGG 2 cut(s) 649, 874
PspN4I GGNNCC 6 cut(s) 655, 946, 994, 1046, 1047, 1048
PspOMI GGGCCC 1 cut(s) 1045
PsuI RGATCY 3 cut(s) 266, 590, 773
PvuII CAGCTG 1 cut(s) 1202
RsaI GTAC 1 cut(s) 241
RsaNI GTAC 1 cut(s) 240
RseI CAYNNNNRTG 1 cut(s) 234
SaqAI TTAA 1 cut(s) 309
SatI GCNGC 5 cut(s) 59, 745, 748, 1054, 1186
SchI GAGTC 3 cut(s) 428, 964, 1012
ScrFI CCNGG 5 cut(s) 252, 651, 788, 808, 876
SduI GDGCHC 1 cut(s) 1049
SetI ASST 9 cut(s) 222, 238, 289, 299, 454, 471, 563, 1129, 1204
SfaNI GCATC 3 cut(s) 25, 130, 421
SfoI GGCGCC 1 cut(s) 994
SinI GGWCC 3 cut(s) 333, 653, 1100
SmiMI CAYNNNNRTG 1 cut(s) 234
Sse9I AATT 7 cut(s) 22, 50, 176, 310, 372, 397, 1111
SseBI AGGCCT 1 cut(s) 874
SsiI CCGC 3 cut(s) 58, 661, 745
SspDI GGCGCC 1 cut(s) 992
SspMI CTAG 7 cut(s) 243, 330, 438, 566, 645, 795, 1128
StuI AGGCCT 1 cut(s) 874
StyD4I CCNGG 5 cut(s) 250, 649, 786, 806, 874
StyI CCWWGG 1 cut(s) 336
TaaI ACNGT 3 cut(s) 833, 932, 1100
TaiI ACGT 1 cut(s) 238
TaqI TCGA 6 cut(s) 40, 272, 478, 709, 763, 951
TasI AATT 7 cut(s) 22, 50, 176, 310, 372, 397, 1111
TauI GCSGC 2 cut(s) 61, 747
Tru1I TTAA 1 cut(s) 309
Tru9I TTAA 1 cut(s) 309
TscAI CASTG 1 cut(s) 495
TseFI GTSAC 3 cut(s) 420, 561, 1094
TseI GCWGC 3 cut(s) 747, 1053, 1185
Tsp45I GTSAC 3 cut(s) 420, 561, 1094
TspDTI ATGAA 5 cut(s) 63, 113, 246, 531, 1080
TspGWI ACGGA 3 cut(s) 309, 827, 893
TspRI CASTG 1 cut(s) 495
Van91I CCANNNNNTGG 1 cut(s) 734
VpaK11BI GGWCC 3 cut(s) 333, 653, 1100
VspI ATTAAT 1 cut(s) 309
XagI CCTNNNNNAGG 1 cut(s) 763
XapI RAATTY 3 cut(s) 22, 176, 397
XmnI GAANNNNTTC 1 cut(s) 268
XspI CTAG 7 cut(s) 243, 330, 438, 566, 645, 795, 1128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.