pycom07g24260

Arginine serine-rich-splicing factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
24979453 .. 24984537
5085 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g24260.6

Sequence Viewer

Length: 1473 bp
ATGTCCGTAATATTTCTTCTTTTATTGTGTTATAATGTGGATTCAAGCAGGTGGCGACATAAATTGTTCCACTTGAACTTGTTTTTGAGAGATACGGGGCCCTTTTCACAAATATCAAAAACGTTGTTTTCTTTATCCCTACTATTTATTTATTCCACTCACGGGGGCTCTCAGTTCGGTCAAATCGAAGAAAGCATCACCTACTTCCTTCGCGTCGCTCGCTTGCTACGGTTCCGAAGAGAAGGCCAGAAAATGAAGCCGATTTTTTGTGGGAATTTTGAATATGATGCTCGACAGAATGAATTGGAGCGGCTGTTTGGTAGATATGGGAAAGTTGATAGGGTCGATATGAAGTCTGGGTTTGCTTTCATCTATATGGAGGATGAGAGAGATGCTGAATATGCCATTAGGGGACTTGACCGAAAAGAATTTGGTCGAAAAGGACGCAGGCTTCGTGTTGAATGGACGAAGCAAGAACGTGGTGCTAGAAGACCTGGTGCATCAAGAAGATCTTCGACTAATACAAGACCCTCAAAGACCTTGTTTGTTATAAATTTTGATCCTTATCACACAAGGACCAAAGATTTGGAGAGGCATTTTGATTCATATGGGAAAATTGTCAGCGTAAGGATCACAAGAAATTTTGCATTTGTTCAGTATGAGTCACAAGAGGATGCTACCAGGGCATTGGAAGCTACAAACATGAGCAAGCTGATGGATCGAGTTATATCGGTGGAATATGCAGTTCGTGATGACGATGAAAGAGGAGATGGATTTAGCCCTGACCGGAGAAGTCGTGATAGGTCTCCAGACAGAGGCCGTGATAGAAGAAGGTCCCCAAGCCCCTACAAAAGAGAGAGAGGTAGCCCTGATTATGGCCGAGGCCCTAGCCCTGGTCCCTACAGGAGAGAAAGGGGTAGTCCTGATTATGGACGTGGAGCAAGTCCTTATAGAAGGGAGAGAGTTAGTTCTGACTATGGCCGTGGGCGCAGCCCAAGTCCATATAGGAGGGACAGGTCTGATCATGGCCGCATCTCCAGTCGTAGTCCTAGAAAAGAGAGGGTGAGTGCTGACCGTGTTCGTGATCGTACCCGTAGTCCTTACGGAAGAGAGAGGCCTGGGGATGACAATGGCCATGGTCCCAGTCGTAGCCCATATAAGAGAGATAGGGTCAGTCCTGAAAATGGTCCCAGACGTAGTCCATATAAGAGAGAACGGGATGGTCCAAGGGATAGTCCTGAAAATGGCCGTCTCCCAAGCAGTAGTCCATATAAGAGAGAGAGGGTCAGTCCTGAACATGGTGGTGGCCACAGCGGTAGTCCTTATGAAACAGAGAGGGCCAGCCCGGAAAATGGTCGTGTTGCAAGCCCAAATTCTGCGCCTGAAGCTAGGGATAGCCCCAACTATGGCGGGCCTGAAAGCCCCATGAATGAGAGATATAGCAGCCGTTCACCGCAAGCTGAGGAGGAATGA

Protein Analysis

491

Amino Acids

56.82

Weight (kDa)

10.18

Isoelectric Point (pI)

73.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 33, 551
AarI CACCTGC 1 cut(s) 39
Acc36I ACCTGC 1 cut(s) 39
AccBSI CCGCTC 1 cut(s) 310
AccII CGCG 1 cut(s) 213
AciI CCGC 5 cut(s) 310, 1030, 1314, 1410, 1454
AclI AACGTT 1 cut(s) 122
AclWI GGATC 3 cut(s) 554, 638, 726
AcoI YGGCCR 6 cut(s) 877, 979, 1027, 1132, 1246, 1306
AcsI RAATTY 5 cut(s) 274, 428, 553, 640, 1372
AcuI CTGAAG 1 cut(s) 1404
AfaI GTAC 1 cut(s) 1090
AgsI TTSAA 4 cut(s) 45, 76, 281, 461
AjiI CACGTC 1 cut(s) 935
AjnI CCWGG 4 cut(s) 493, 680, 892, 1117
AluBI AGCT 4 cut(s) 695, 712, 1388, 1460
AluI AGCT 4 cut(s) 695, 712, 1388, 1460
Alw26I GTCTC 2 cut(s) 810, 1256
AlwI GGATC 3 cut(s) 554, 638, 726
ApaI GGGCCC 1 cut(s) 102
ApeKI GCWGC 2 cut(s) 990, 1443
ApoI RAATTY 5 cut(s) 274, 428, 553, 640, 1372
ArsI GACNNNNNNTTYG 4 cut(s) 435, 467, 568, 600
Asp700I GAANNNNTTC 1 cut(s) 511
AspLEI GCGC 2 cut(s) 990, 1381
AsuC2I CCSGG 1 cut(s) 1346
AsuHPI GGTGA 3 cut(s) 190, 1075, 1443
AvaII GGWCC 6 cut(s) 576, 834, 896, 1139, 1187, 1223
BaeGI GKGCMC 1 cut(s) 102
BalI TGGCCA 2 cut(s) 1134, 1308
BanII GRGCYC 2 cut(s) 102, 170
BarI GAAGNNNNNNTAC 1 cut(s) 32
BbsI GAAGAC 1 cut(s) 496
BbvCI CCTCAGC 1 cut(s) 1461
BbvI GCAGC 2 cut(s) 1002, 1455
BccI CCATC 3 cut(s) 709, 764, 1214
BceAI ACGGC 4 cut(s) 804, 966, 1233, 1431
BciT130I CCWGG 4 cut(s) 495, 682, 894, 1119
BclI TGATCA 1 cut(s) 1021
BcnI CCSGG 1 cut(s) 1346
BcoDI GTCTC 2 cut(s) 810, 1256
BfaI CTAG 4 cut(s) 486, 888, 1050, 1389
BfmI CTRYAG 1 cut(s) 901
BfuAI ACCTGC 1 cut(s) 39
BglII AGATCT 1 cut(s) 509
BisI GCNGC 4 cut(s) 311, 991, 1030, 1444
BlsI GCNGC 4 cut(s) 312, 992, 1031, 1445
Bme1390I CCNGG 5 cut(s) 495, 682, 894, 1119, 1346
Bme18I GGWCC 6 cut(s) 576, 834, 896, 1139, 1187, 1223
BmgBI CACGTC 1 cut(s) 935
BmiI GGNNCC 7 cut(s) 99, 100, 233, 836, 898, 1141, 1189
BmrFI CCNGG 5 cut(s) 495, 682, 894, 1119, 1346
BmrI ACTGGG 1 cut(s) 1137
BmsI GCATC 6 cut(s) 204, 277, 382, 509, 664, 1041
BmuI ACTGGG 1 cut(s) 1137
BpiI GAAGAC 1 cut(s) 496
BpmI CTGGAG 2 cut(s) 792, 1021
Bpu10I CCTNAGC 1 cut(s) 1461
BpuMI CCSGG 1 cut(s) 1346
BsaBI GATNNNNATC 1 cut(s) 564
BsaI GGTCTC 1 cut(s) 810
BsaJI CCNNGG 7 cut(s) 681, 880, 892, 982, 1118, 1135, 1226
BsaWI WCCGGW 1 cut(s) 786
BsaXI ACNNNNNCTCC 4 cut(s) 299, 329, 781, 811
Bse1I ACTGG 2 cut(s) 1038, 1143
Bse8I GATNNNNATC 1 cut(s) 564
BseBI CCWGG 4 cut(s) 495, 682, 894, 1119
BseDI CCNNGG 7 cut(s) 681, 880, 892, 982, 1118, 1135, 1226
BseGI GGATG 4 cut(s) 388, 679, 1129, 1225
BseJI GATNNNNATC 1 cut(s) 564
BseMII CTCAG 2 cut(s) 185, 1452
BseNI ACTGG 2 cut(s) 1038, 1143
BseRI GAGGAG 1 cut(s) 780
BseSI GKGCMC 1 cut(s) 102
BseXI GCAGC 2 cut(s) 1002, 1455
Bsh1236I CGCG 1 cut(s) 213
BsiSI CCGG 2 cut(s) 787, 1346
BslFI GGGAC 6 cut(s) 426, 820, 882, 1025, 1125, 1173
BsmAI GTCTC 2 cut(s) 810, 1256
BsmBI CGTCTC 1 cut(s) 1256
BsmFI GGGAC 6 cut(s) 426, 820, 882, 1025, 1125, 1173
Bso31I GGTCTC 1 cut(s) 810
Bsp120I GGGCCC 1 cut(s) 98
Bsp1286I GDGCHC 2 cut(s) 102, 170
Bsp143I GATC 6 cut(s) 509, 559, 630, 718, 1021, 1084
Bsp19I CCATGG 1 cut(s) 1135
BspACI CCGC 5 cut(s) 310, 1030, 1314, 1410, 1454
BspCNI CTCAG 2 cut(s) 184, 1453
BspFNI CGCG 1 cut(s) 213
BspLI GGNNCC 7 cut(s) 99, 100, 233, 836, 898, 1141, 1189
BspMI ACCTGC 1 cut(s) 39
BspPI GGATC 3 cut(s) 554, 638, 726
BspTNI GGTCTC 1 cut(s) 810
BsrBI CCGCTC 1 cut(s) 310
BsrI ACTGG 2 cut(s) 1038, 1143
BssECI CCNNGG 7 cut(s) 681, 880, 892, 982, 1118, 1135, 1226
BssMI GATC 6 cut(s) 509, 559, 630, 718, 1021, 1084
BssT1I CCWWGG 2 cut(s) 1135, 1226
Bst2UI CCWGG 4 cut(s) 495, 682, 894, 1119
Bst4CI ACNGT 2 cut(s) 231, 1076
Bst6I CTCTTC 2 cut(s) 232, 1102
BstC8I GCNNGC 8 cut(s) 220, 224, 449, 710, 1342, 1366, 1412, 1458
BstDEI CTNAG 2 cut(s) 171, 1461
BstDSI CCRYGG 2 cut(s) 982, 1135
BstF5I GGATG 4 cut(s) 388, 679, 1129, 1225
BstFNI CGCG 1 cut(s) 213
BstHHI GCGC 2 cut(s) 990, 1381
BstKTI GATC 6 cut(s) 512, 562, 633, 721, 1024, 1087
BstMAI GTCTC 2 cut(s) 810, 1256
BstMBI GATC 6 cut(s) 509, 559, 630, 718, 1021, 1084
BstMWI GCNNNNNNNGC 6 cut(s) 219, 401, 683, 692, 987, 1385
BstNI CCWGG 4 cut(s) 495, 682, 894, 1119
BstSCI CCNGG 5 cut(s) 493, 680, 892, 1117, 1344
BstSFI CTRYAG 1 cut(s) 901
BstSLI GKGCMC 1 cut(s) 102
BstUI CGCG 1 cut(s) 213
BstV1I GCAGC 2 cut(s) 1002, 1455
BstV2I GAAGAC 1 cut(s) 496
BstX2I RGATCY 1 cut(s) 509
BstXI CCANNNNNNTGG 2 cut(s) 586, 688
BstYI RGATCY 1 cut(s) 509
BtgI CCRYGG 2 cut(s) 982, 1135
BtrI CACGTC 1 cut(s) 935
BtsCI GGATG 4 cut(s) 388, 679, 1129, 1225
BveI ACCTGC 1 cut(s) 39
Cac8I GCNNGC 8 cut(s) 220, 224, 449, 710, 1342, 1366, 1412, 1458
CfoI GCGC 2 cut(s) 990, 1381
CseI GACGC 2 cut(s) 202, 453
CsiI ACCWGGT 1 cut(s) 493
Csp6I GTAC 1 cut(s) 1089
CviAII CATG 5 cut(s) 703, 1025, 1136, 1298, 1426
CviQI GTAC 1 cut(s) 1089
DdeI CTNAG 2 cut(s) 171, 1461
DpnI GATC 6 cut(s) 511, 561, 632, 720, 1023, 1086
DpnII GATC 6 cut(s) 509, 559, 630, 718, 1021, 1084
EaeI YGGCCR 6 cut(s) 877, 979, 1027, 1132, 1246, 1306
Eam1104I CTCTTC 2 cut(s) 232, 1102
EarI CTCTTC 2 cut(s) 232, 1102
Eco130I CCWWGG 2 cut(s) 1135, 1226
Eco147I AGGCCT 1 cut(s) 1117
Eco24I GRGCYC 2 cut(s) 102, 170
Eco31I GGTCTC 1 cut(s) 810
Eco47I GGWCC 6 cut(s) 576, 834, 896, 1139, 1187, 1223
Eco57I CTGAAG 1 cut(s) 1404
EcoO109I RGGNCCY 4 cut(s) 98, 99, 834, 884
EcoRII CCWGG 4 cut(s) 493, 680, 892, 1117
EcoT14I CCWWGG 2 cut(s) 1135, 1226
EcoT38I GRGCYC 2 cut(s) 102, 170
ErhI CCWWGG 2 cut(s) 1135, 1226
Esp3I CGTCTC 1 cut(s) 1256
FaeI CATG 5 cut(s) 706, 1028, 1139, 1301, 1429
FalI AAGNNNNNCTT 2 cut(s) 496, 528
FaqI GGGAC 6 cut(s) 426, 820, 882, 1025, 1125, 1173
FatI CATG 5 cut(s) 702, 1024, 1135, 1297, 1425
FauI CCCGC 1 cut(s) 1403
FauNDI CATATG 1 cut(s) 607
FbaI TGATCA 1 cut(s) 1021
Fnu4HI GCNGC 4 cut(s) 311, 991, 1030, 1444
FokI GGATG 4 cut(s) 395, 686, 1136, 1232
FriOI GRGCYC 2 cut(s) 102, 170
Fsp4HI GCNGC 4 cut(s) 311, 991, 1030, 1444
FspBI CTAG 4 cut(s) 486, 888, 1050, 1389
GlaI GCGC 2 cut(s) 989, 1380
GluI GCNGC 4 cut(s) 311, 991, 1030, 1444
GsuI CTGGAG 2 cut(s) 792, 1021
HapII CCGG 2 cut(s) 787, 1346
HgaI GACGC 2 cut(s) 202, 453
HhaI GCGC 2 cut(s) 990, 1381
Hin1II CATG 5 cut(s) 706, 1028, 1139, 1301, 1429
Hin6I GCGC 2 cut(s) 988, 1379
HinP1I GCGC 2 cut(s) 988, 1379
HinfI GANTC 3 cut(s) 41, 602, 662
HpaII CCGG 2 cut(s) 787, 1346
HphI GGTGA 3 cut(s) 190, 1075, 1443
Hpy166II GTNNAC 1 cut(s) 1451
Hpy188I TCNGA 3 cut(s) 236, 973, 1021
Hpy188III TCNNGA 9 cut(s) 504, 749, 797, 809, 923, 1082, 1178, 1238, 1292
Hpy8I GTNNAC 1 cut(s) 1451
Hpy99I CGWCG 1 cut(s) 218
HpyAV CCTTC 4 cut(s) 218, 236, 825, 948
HpyCH4III ACNGT 2 cut(s) 231, 1076
HpyCH4IV ACGT 4 cut(s) 122, 478, 934, 1195
HpyCH4V TGCA 4 cut(s) 500, 647, 743, 1364
HpyF10VI GCNNNNNNNGC 6 cut(s) 219, 401, 683, 692, 987, 1385
HpyF3I CTNAG 2 cut(s) 171, 1461
HpySE526I ACGT 4 cut(s) 122, 478, 934, 1195
Hsp92II CATG 5 cut(s) 706, 1028, 1139, 1301, 1429
HspAI GCGC 2 cut(s) 988, 1379
Ksp22I TGATCA 1 cut(s) 1021
Kzo9I GATC 6 cut(s) 509, 559, 630, 718, 1021, 1084
LmnI GCTCC 2 cut(s) 307, 938
Lsp1109I GCAGC 2 cut(s) 1002, 1455
LweI GCATC 6 cut(s) 204, 277, 382, 509, 664, 1041
MabI ACCWGGT 1 cut(s) 493
MaeI CTAG 4 cut(s) 486, 888, 1050, 1389
MaeII ACGT 4 cut(s) 122, 478, 934, 1195
MaeIII GTNAC 1 cut(s) 663
MalI GATC 6 cut(s) 511, 561, 632, 720, 1023, 1086
MbiI CCGCTC 1 cut(s) 310
MboI GATC 6 cut(s) 509, 559, 630, 718, 1021, 1084
MboII GAAGA 8 cut(s) 8, 200, 249, 501, 504, 519, 840, 1119
MflI RGATCY 1 cut(s) 509
MhlI GDGCHC 2 cut(s) 102, 170
MlsI TGGCCA 2 cut(s) 1134, 1308
MluCI AATT 8 cut(s) 62, 274, 302, 428, 553, 615, 640, 1372
MluNI TGGCCA 2 cut(s) 1134, 1308
MlyI GAGTC 1 cut(s) 671
Mox20I TGGCCA 2 cut(s) 1134, 1308
MroXI GAANNNNTTC 1 cut(s) 511
MscI TGGCCA 2 cut(s) 1134, 1308
MslI CAYNNNNRTG 2 cut(s) 374, 1302
Msp20I TGGCCA 2 cut(s) 1134, 1308
MspA1I CMGCKG 1 cut(s) 1314
MspI CCGG 2 cut(s) 787, 1346
MspR9I CCNGG 5 cut(s) 495, 682, 894, 1119, 1346
MvaI CCWGG 4 cut(s) 495, 682, 894, 1119
MvnI CGCG 1 cut(s) 213
MwoI GCNNNNNNNGC 6 cut(s) 219, 401, 683, 692, 987, 1385
NciI CCSGG 1 cut(s) 1346
NcoI CCATGG 1 cut(s) 1135
NdeI CATATG 1 cut(s) 607
NdeII GATC 6 cut(s) 509, 559, 630, 718, 1021, 1084
NlaIII CATG 5 cut(s) 706, 1028, 1139, 1301, 1429
NlaIV GGNNCC 7 cut(s) 99, 100, 233, 836, 898, 1141, 1189
NmeAIII GCCGAG 1 cut(s) 905
NmuCI GTSAC 1 cut(s) 663
PaqCI CACCTGC 1 cut(s) 39
PceI AGGCCT 1 cut(s) 1117
PcsI WCGNNNNNNNCGW 2 cut(s) 183, 451
PdmI GAANNNNTTC 1 cut(s) 511
PfeI GAWTC 2 cut(s) 41, 602
PflFI GACNNNGTC 1 cut(s) 1197
PkrI GCNGC 4 cut(s) 312, 992, 1031, 1445
PleI GAGTC 1 cut(s) 670
PpsI GAGTC 1 cut(s) 670
PpuMI RGGWCCY 1 cut(s) 834
PsiI TTATAA 2 cut(s) 33, 551
Psp1406I AACGTT 1 cut(s) 122
Psp5II RGGWCCY 1 cut(s) 834
Psp6I CCWGG 4 cut(s) 493, 680, 892, 1117
PspGI CCWGG 4 cut(s) 493, 680, 892, 1117
PspN4I GGNNCC 7 cut(s) 99, 100, 233, 836, 898, 1141, 1189
PspOMI GGGCCC 1 cut(s) 98
PspPPI RGGWCCY 1 cut(s) 834
PsuI RGATCY 1 cut(s) 509
PsyI GACNNNGTC 1 cut(s) 1197
RsaI GTAC 1 cut(s) 1090
RsaNI GTAC 1 cut(s) 1089
RseI CAYNNNNRTG 2 cut(s) 374, 1302
SatI GCNGC 4 cut(s) 311, 991, 1030, 1444
Sau3AI GATC 6 cut(s) 509, 559, 630, 718, 1021, 1084
SchI GAGTC 1 cut(s) 671
ScrFI CCNGG 5 cut(s) 495, 682, 894, 1119, 1346
SduI GDGCHC 2 cut(s) 102, 170
SexAI ACCWGGT 1 cut(s) 493
SfaNI GCATC 6 cut(s) 204, 277, 382, 509, 664, 1041
SfcI CTRYAG 1 cut(s) 901
SinI GGWCC 6 cut(s) 576, 834, 896, 1139, 1187, 1223
SmiMI CAYNNNNRTG 2 cut(s) 374, 1302
Sse9I AATT 8 cut(s) 62, 274, 302, 428, 553, 615, 640, 1372
SseBI AGGCCT 1 cut(s) 1117
SsiI CCGC 5 cut(s) 310, 1030, 1314, 1410, 1454
SspI AATATT 1 cut(s) 12
SspMI CTAG 4 cut(s) 486, 888, 1050, 1389
StuI AGGCCT 1 cut(s) 1117
StyD4I CCNGG 5 cut(s) 493, 680, 892, 1117, 1344
StyI CCWWGG 2 cut(s) 1135, 1226
TaaI ACNGT 2 cut(s) 231, 1076
TaiI ACGT 4 cut(s) 125, 481, 937, 1198
TaqI TCGA 6 cut(s) 186, 292, 345, 436, 515, 721
TaqII GACCGA 2 cut(s) 167, 435
TasI AATT 8 cut(s) 62, 274, 302, 428, 553, 615, 640, 1372
TauI GCSGC 2 cut(s) 313, 1032
TfiI GAWTC 2 cut(s) 41, 602
TseFI GTSAC 1 cut(s) 663
TseI GCWGC 2 cut(s) 990, 1443
Tsp45I GTSAC 1 cut(s) 663
TspDTI ATGAA 8 cut(s) 269, 315, 358, 365, 594, 774, 1341, 1442
TspGWI ACGGA 1 cut(s) 1119
Tth111I GACNNNGTC 1 cut(s) 1197
VpaK11BI GGWCC 6 cut(s) 576, 834, 896, 1139, 1187, 1223
XapI RAATTY 5 cut(s) 274, 428, 553, 640, 1372
XmnI GAANNNNTTC 1 cut(s) 511
XspI CTAG 4 cut(s) 486, 888, 1050, 1389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.