sd2-5 sd2-5 (s-domain-2 5)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G32300 |
| fragaria_vesca | FvH4_2g29050 FvH4_2g29070 |
| malus_domestica | MD00G1144200.v1.1 MD15G1121900.v1.1 MD15G1122800.v1.1 MD15G1125500.v1.1 |
| prunus_persica | Prupe.1G481100_v2.0.a1 |
| pyrus_communis | pycom15g10990 pycom15g11300 |
| rosa_chinensis | RchiOBHm_Chr4g0385931 RchiOBHm_Chr6g0297921 RchiOBHm_Chr6g0297931 |
| rosa_laevigata | RLG00000010199 RLG00000011550 RLG00000011551 |
| rosa_multiflora | Rmu_co8186410.1_g000001 Rmu_sc0007302.1_g000003 Rmu_sc0007302.1_g000004 Rmu_sc0007400.1_g000011 Rmu_sc0011097.1_g000002 Rmu_sc0011097.1_g000003 Rmu_sc0011097.1_g000004 Rmu_sc0015868.1_g000001 Rmu_sc0030316.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00333530 Rroxscaffold_7G00170060 Rroxscaffold_7G00178900 Rroxscaffold_7G00178910 |
| rosa_rugosa | Rorug03G0303100 Rorug06G0276800 |
| rosa_samantha | Rh4CG008200 Rh4DG007100 Rh6AG387500 Rh6BG395900 Rh6CG401600 Rh6CG401700 Rh6CG401800 Rh6DG388100 |
| rosa_wichuraiana | Rw4G000320 Rw6G033760 Rw6G033810 Rw6G033820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 655, 2454 |
| Acc16I | TGCGCA | 1 cut(s) | 1666 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 98 |
| AccI | GTMKAC | 2 cut(s) | 1029, 2239 |
| AccII | CGCG | 3 cut(s) | 254, 1935, 1965 |
| AccIII | TCCGGA | 1 cut(s) | 1350 |
| AclWI | GGATC | 9 cut(s) | 44, 57, 112, 629, 761, 1522, 2003, 2078, 2347 |
| AcsI | RAATTY | 2 cut(s) | 670, 1595 |
| AcuI | CTGAAG | 1 cut(s) | 1448 |
| AcyI | GRCGYC | 1 cut(s) | 9 |
| AdeI | CACNNNGTG | 1 cut(s) | 1645 |
| AfaI | GTAC | 2 cut(s) | 1237, 1531 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 98, 618, 2232 |
| AflIII | ACRYGT | 1 cut(s) | 29 |
| AgsI | TTSAA | 8 cut(s) | 369, 481, 1571, 1891, 2131, 2210, 2285, 2294 |
| AjnI | CCWGG | 1 cut(s) | 91 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 319, 351, 1361, 1393 |
| AleI | CACNNNNGTG | 1 cut(s) | 2233 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 248, 280 |
| Alw26I | GTCTC | 6 cut(s) | 663, 930, 1014, 2254, 2338, 2440 |
| AlwI | GGATC | 9 cut(s) | 44, 57, 112, 629, 761, 1522, 2003, 2078, 2347 |
| Ama87I | CYCGRG | 3 cut(s) | 889, 927, 1862 |
| Aor13HI | TCCGGA | 1 cut(s) | 1350 |
| AoxI | GGCC | 2 cut(s) | 872, 1344 |
| ApeKI | GCWGC | 5 cut(s) | 231, 379, 815, 1003, 1684 |
| ApoI | RAATTY | 2 cut(s) | 670, 1595 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1481, 1595, 2205 |
| AspLEI | GCGC | 2 cut(s) | 1667, 1965 |
| AspS9I | GGNCC | 5 cut(s) | 249, 872, 2311, 2405, 2456 |
| AsuC2I | CCSGG | 4 cut(s) | 391, 919, 952, 1432 |
| AsuHPI | GGTGA | 2 cut(s) | 328, 1501 |
| AvaI | CYCGRG | 3 cut(s) | 889, 927, 1862 |
| AvaII | GGWCC | 4 cut(s) | 249, 2311, 2405, 2456 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 118, 151 |
| BamHI | GGATCC | 1 cut(s) | 49 |
| BanII | GRGCYC | 2 cut(s) | 934, 1678 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1518, 1550 |
| BauI | CACGAG | 1 cut(s) | 1114 |
| BbsI | GAAGAC | 2 cut(s) | 4, 1942 |
| BbvI | GCAGC | 5 cut(s) | 243, 366, 802, 1015, 1671 |
| BceAI | ACGGC | 2 cut(s) | 2398, 2426 |
| BciT130I | CCWGG | 1 cut(s) | 93 |
| BciVI | GTATCC | 1 cut(s) | 1912 |
| BclI | TGATCA | 3 cut(s) | 442, 462, 688 |
| BcnI | CCSGG | 4 cut(s) | 391, 919, 952, 1432 |
| BcoDI | GTCTC | 6 cut(s) | 663, 930, 1014, 2254, 2338, 2440 |
| BfaI | CTAG | 7 cut(s) | 501, 840, 1007, 1553, 1760, 2054, 2322 |
| BfuI | GTATCC | 1 cut(s) | 1912 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 871 |
| BglII | AGATCT | 1 cut(s) | 1459 |
| BisI | GCNGC | 7 cut(s) | 232, 380, 640, 816, 1004, 1649, 1685 |
| BlsI | GCNGC | 7 cut(s) | 233, 381, 641, 817, 1005, 1650, 1686 |
| BmcAI | AGTACT | 1 cut(s) | 1237 |
| Bme1390I | CCNGG | 5 cut(s) | 93, 391, 919, 952, 1432 |
| Bme18I | GGWCC | 4 cut(s) | 249, 2311, 2405, 2456 |
| BmeT110I | CYCGRG | 3 cut(s) | 889, 927, 1862 |
| BmgT120I | GGNCC | 5 cut(s) | 249, 872, 2311, 2405, 2456 |
| BmiI | GGNNCC | 3 cut(s) | 51, 1386, 1986 |
| BmrFI | CCNGG | 5 cut(s) | 93, 391, 919, 952, 1432 |
| BmsI | GCATC | 4 cut(s) | 93, 818, 1425, 1822 |
| BpiI | GAAGAC | 2 cut(s) | 4, 1942 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 73, 105 |
| BpmI | CTGGAG | 4 cut(s) | 75, 1038, 1266, 1971 |
| Bpu10I | CCTNAGC | 1 cut(s) | 861 |
| BpuEI | CTTGAG | 4 cut(s) | 557, 570, 1374, 2338 |
| BpuMI | CCSGG | 4 cut(s) | 391, 919, 952, 1432 |
| BsaAI | YACGTR | 1 cut(s) | 59 |
| BsaHI | GRCGYC | 1 cut(s) | 9 |
| BsaI | GGTCTC | 1 cut(s) | 2254 |
| BsaJI | CCNNGG | 5 cut(s) | 664, 978, 1120, 1605, 1896 |
| BsaWI | WCCGGW | 4 cut(s) | 46, 1350, 2305, 2453 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 543, 573, 1011, 1041 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 98, 618, 2232 |
| Bse118I | RCCGGY | 1 cut(s) | 62 |
| Bse1I | ACTGG | 2 cut(s) | 1243, 1920 |
| Bse3DI | GCAATG | 2 cut(s) | 992, 1201 |
| BseAI | TCCGGA | 1 cut(s) | 1350 |
| BseBI | CCWGG | 1 cut(s) | 93 |
| BseDI | CCNNGG | 5 cut(s) | 664, 978, 1120, 1605, 1896 |
| BseGI | GGATG | 6 cut(s) | 219, 445, 914, 1440, 1750, 1869 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 98, 618, 2232 |
| BseMI | GCAATG | 2 cut(s) | 992, 1201 |
| BseMII | CTCAG | 6 cut(s) | 122, 171, 226, 321, 738, 852 |
| BseNI | ACTGG | 2 cut(s) | 1243, 1920 |
| BseRI | GAGGAG | 2 cut(s) | 1044, 1377 |
| BseXI | GCAGC | 5 cut(s) | 243, 366, 802, 1015, 1671 |
| BsgI | GTGCAG | 1 cut(s) | 1622 |
| Bsh1236I | CGCG | 3 cut(s) | 254, 1935, 1965 |
| BshFI | GGCC | 2 cut(s) | 874, 1346 |
| BsiHKCI | CYCGRG | 3 cut(s) | 889, 927, 1862 |
| BsiSI | CCGG | 9 cut(s) | 47, 63, 390, 918, 951, 1351, 1431, 2306, 2454 |
| BslFI | GGGAC | 2 cut(s) | 1781, 1981 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 98, 618, 2232 |
| BsmAI | GTCTC | 6 cut(s) | 663, 930, 1014, 2254, 2338, 2440 |
| BsmBI | CGTCTC | 2 cut(s) | 663, 1014 |
| BsmFI | GGGAC | 2 cut(s) | 1781, 1981 |
| BsnI | GGCC | 2 cut(s) | 874, 1346 |
| Bso31I | GGTCTC | 1 cut(s) | 2254 |
| BsoBI | CYCGRG | 3 cut(s) | 889, 927, 1862 |
| Bsp1286I | GDGCHC | 2 cut(s) | 934, 1678 |
| Bsp13I | TCCGGA | 1 cut(s) | 1350 |
| BspANI | GGCC | 2 cut(s) | 874, 1346 |
| BspCNI | CTCAG | 6 cut(s) | 121, 170, 225, 322, 737, 853 |
| BspEI | TCCGGA | 1 cut(s) | 1350 |
| BspFNI | CGCG | 3 cut(s) | 254, 1935, 1965 |
| BspHI | TCATGA | 1 cut(s) | 1926 |
| BspLI | GGNNCC | 3 cut(s) | 51, 1386, 1986 |
| BspPI | GGATC | 9 cut(s) | 44, 57, 112, 629, 761, 1522, 2003, 2078, 2347 |
| BspTNI | GGTCTC | 1 cut(s) | 2254 |
| BsrDI | GCAATG | 2 cut(s) | 992, 1201 |
| BsrFI | RCCGGY | 1 cut(s) | 62 |
| BsrI | ACTGG | 2 cut(s) | 1243, 1920 |
| BssAI | RCCGGY | 1 cut(s) | 62 |
| BssECI | CCNNGG | 5 cut(s) | 664, 978, 1120, 1605, 1896 |
| BssNAI | GTATAC | 1 cut(s) | 2240 |
| BssNI | GRCGYC | 1 cut(s) | 9 |
| BssSI | CACGAG | 1 cut(s) | 1114 |
| BssT1I | CCWWGG | 4 cut(s) | 664, 978, 1120, 1896 |
| Bst1107I | GTATAC | 1 cut(s) | 2240 |
| Bst2BI | CACGAG | 1 cut(s) | 1114 |
| Bst2UI | CCWGG | 1 cut(s) | 93 |
| Bst4CI | ACNGT | 6 cut(s) | 776, 1025, 1142, 1315, 2409, 2423 |
| Bst6I | CTCTTC | 1 cut(s) | 2015 |
| BstACI | GRCGYC | 1 cut(s) | 9 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 815, 1645 |
| BstBAI | YACGTR | 1 cut(s) | 59 |
| BstC8I | GCNNGC | 2 cut(s) | 872, 1689 |
| BstDEI | CTNAG | 7 cut(s) | 108, 157, 212, 330, 724, 861, 1652 |
| BstF5I | GGATG | 6 cut(s) | 219, 445, 914, 1440, 1750, 1869 |
| BstFNI | CGCG | 3 cut(s) | 254, 1935, 1965 |
| BstHHI | GCGC | 2 cut(s) | 1667, 1965 |
| BstMAI | GTCTC | 6 cut(s) | 663, 930, 1014, 2254, 2338, 2440 |
| BstNI | CCWGG | 1 cut(s) | 93 |
| BstSCI | CCNGG | 5 cut(s) | 91, 389, 917, 950, 1430 |
| BstUI | CGCG | 3 cut(s) | 254, 1935, 1965 |
| BstV1I | GCAGC | 5 cut(s) | 243, 366, 802, 1015, 1671 |
| BstV2I | GAAGAC | 2 cut(s) | 4, 1942 |
| BstX2I | RGATCY | 3 cut(s) | 49, 104, 1459 |
| BstYI | RGATCY | 3 cut(s) | 49, 104, 1459 |
| BstZ17I | GTATAC | 1 cut(s) | 2240 |
| BsuI | GTATCC | 1 cut(s) | 1912 |
| BsuRI | GGCC | 2 cut(s) | 874, 1346 |
| BtgZI | GCGATG | 2 cut(s) | 1309, 1764 |
| BtsCI | GGATG | 6 cut(s) | 219, 445, 914, 1440, 1750, 1869 |
| BtsI | GCAGTG | 1 cut(s) | 1846 |
| BtsIMutI | CAGTG | 2 cut(s) | 1846, 2428 |
| Cac8I | GCNNGC | 2 cut(s) | 872, 1689 |
| CciI | TCATGA | 1 cut(s) | 1926 |
| CfoI | GCGC | 2 cut(s) | 1667, 1965 |
| Cfr10I | RCCGGY | 1 cut(s) | 62 |
| Cfr13I | GGNCC | 5 cut(s) | 249, 872, 2311, 2405, 2456 |
| CpoI | CGGWCCG | 1 cut(s) | 2456 |
| CseI | GACGC | 1 cut(s) | 60 |
| Csp6I | GTAC | 2 cut(s) | 1236, 1530 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1091, 1126 |
| CspI | CGGWCCG | 1 cut(s) | 2456 |
| CviAII | CATG | 6 cut(s) | 490, 523, 675, 1820, 1927, 1946 |
| CviQI | GTAC | 2 cut(s) | 1236, 1530 |
| DdeI | CTNAG | 7 cut(s) | 108, 157, 212, 330, 724, 861, 1652 |
| DraI | TTTAAA | 1 cut(s) | 1183 |
| DraIII | CACNNNGTG | 1 cut(s) | 1645 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 655, 2454 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 655, 2454 |
| Eam1104I | CTCTTC | 1 cut(s) | 2015 |
| EarI | CTCTTC | 1 cut(s) | 2015 |
| EciI | GGCGGA | 1 cut(s) | 2428 |
| Eco130I | CCWWGG | 4 cut(s) | 664, 978, 1120, 1896 |
| Eco24I | GRGCYC | 2 cut(s) | 934, 1678 |
| Eco31I | GGTCTC | 1 cut(s) | 2254 |
| Eco32I | GATATC | 1 cut(s) | 2013 |
| Eco47I | GGWCC | 4 cut(s) | 249, 2311, 2405, 2456 |
| Eco57I | CTGAAG | 1 cut(s) | 1448 |
| Eco88I | CYCGRG | 3 cut(s) | 889, 927, 1862 |
| EcoRI | GAATTC | 2 cut(s) | 670, 1595 |
| EcoRII | CCWGG | 1 cut(s) | 91 |
| EcoRV | GATATC | 1 cut(s) | 2013 |
| EcoT14I | CCWWGG | 4 cut(s) | 664, 978, 1120, 1896 |
| EcoT38I | GRGCYC | 2 cut(s) | 934, 1678 |
| ErhI | CCWWGG | 4 cut(s) | 664, 978, 1120, 1896 |
| Esp3I | CGTCTC | 2 cut(s) | 663, 1014 |
| FaeI | CATG | 6 cut(s) | 493, 526, 678, 1823, 1930, 1949 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2136, 2168 |
| FaqI | GGGAC | 2 cut(s) | 1781, 1981 |
| FatI | CATG | 6 cut(s) | 489, 522, 674, 1819, 1926, 1945 |
| FauI | CCCGC | 3 cut(s) | 863, 1940, 1958 |
| FbaI | TGATCA | 3 cut(s) | 442, 462, 688 |
| FblI | GTMKAC | 2 cut(s) | 1029, 2239 |
| Fnu4HI | GCNGC | 7 cut(s) | 232, 380, 640, 816, 1004, 1649, 1685 |
| FokI | GGATG | 6 cut(s) | 206, 432, 921, 1447, 1757, 1856 |
| FriOI | GRGCYC | 2 cut(s) | 934, 1678 |
| Fsp4HI | GCNGC | 7 cut(s) | 232, 380, 640, 816, 1004, 1649, 1685 |
| FspBI | CTAG | 7 cut(s) | 501, 840, 1007, 1553, 1760, 2054, 2322 |
| FspI | TGCGCA | 1 cut(s) | 1666 |
| GlaI | GCGC | 2 cut(s) | 1666, 1964 |
| GluI | GCNGC | 7 cut(s) | 232, 380, 640, 816, 1004, 1649, 1685 |
| GsuI | CTGGAG | 4 cut(s) | 75, 1038, 1266, 1971 |
| HaeIII | GGCC | 2 cut(s) | 874, 1346 |
| HapII | CCGG | 9 cut(s) | 47, 63, 390, 918, 951, 1351, 1431, 2306, 2454 |
| HgaI | GACGC | 1 cut(s) | 60 |
| HhaI | GCGC | 2 cut(s) | 1667, 1965 |
| Hin1I | GRCGYC | 1 cut(s) | 9 |
| Hin1II | CATG | 6 cut(s) | 493, 526, 678, 1823, 1930, 1949 |
| Hin6I | GCGC | 2 cut(s) | 1665, 1963 |
| HinP1I | GCGC | 2 cut(s) | 1665, 1963 |
| HincII | GTYRAC | 2 cut(s) | 415, 571 |
| HindII | GTYRAC | 2 cut(s) | 415, 571 |
| HindIII | AAGCTT | 4 cut(s) | 474, 1177, 2150, 2356 |
| HpaI | GTTAAC | 1 cut(s) | 571 |
| HpaII | CCGG | 9 cut(s) | 47, 63, 390, 918, 951, 1351, 1431, 2306, 2454 |
| HphI | GGTGA | 2 cut(s) | 328, 1501 |
| Hpy166II | GTNNAC | 7 cut(s) | 207, 415, 571, 1030, 1846, 2032, 2240 |
| Hpy8I | GTNNAC | 7 cut(s) | 207, 415, 571, 1030, 1846, 2032, 2240 |
| Hpy99I | CGWCG | 1 cut(s) | 1477 |
| HpyCH4III | ACNGT | 6 cut(s) | 776, 1025, 1142, 1315, 2409, 2423 |
| HpyCH4IV | ACGT | 3 cut(s) | 29, 58, 2396 |
| HpyCH4V | TGCA | 6 cut(s) | 945, 989, 1003, 1639, 1835, 2254 |
| HpyF3I | CTNAG | 7 cut(s) | 108, 157, 212, 330, 724, 861, 1652 |
| HpySE526I | ACGT | 3 cut(s) | 29, 58, 2396 |
| Hsp92I | GRCGYC | 1 cut(s) | 9 |
| Hsp92II | CATG | 6 cut(s) | 493, 526, 678, 1823, 1930, 1949 |
| HspAI | GCGC | 2 cut(s) | 1665, 1963 |
| Kpn2I | TCCGGA | 1 cut(s) | 1350 |
| Ksp22I | TGATCA | 3 cut(s) | 442, 462, 688 |
| KspAI | GTTAAC | 1 cut(s) | 571 |
| LmnI | GCTCC | 5 cut(s) | 81, 806, 1057, 1390, 1990 |
| Lsp1109I | GCAGC | 5 cut(s) | 243, 366, 802, 1015, 1671 |
| LweI | GCATC | 4 cut(s) | 93, 818, 1425, 1822 |
| MaeI | CTAG | 7 cut(s) | 501, 840, 1007, 1553, 1760, 2054, 2322 |
| MaeII | ACGT | 3 cut(s) | 29, 58, 2396 |
| MaeIII | GTNAC | 8 cut(s) | 25, 178, 196, 383, 646, 1309, 2191, 2417 |
| MfeI | CAATTG | 1 cut(s) | 1108 |
| MflI | RGATCY | 3 cut(s) | 49, 104, 1459 |
| MhlI | GDGCHC | 2 cut(s) | 934, 1678 |
| MluCI | AATT | 8 cut(s) | 115, 277, 349, 670, 1108, 1150, 1595, 2428 |
| MlyI | GAGTC | 2 cut(s) | 380, 2442 |
| MmeI | TCCRAC | 4 cut(s) | 174, 306, 473, 1698 |
| MroI | TCCGGA | 1 cut(s) | 1350 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1481, 1595, 2205 |
| MseI | TTAA | 6 cut(s) | 570, 578, 1182, 1779, 2060, 2364 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1958, 2233 |
| MspI | CCGG | 9 cut(s) | 47, 63, 390, 918, 951, 1351, 1431, 2306, 2454 |
| MspR9I | CCNGG | 5 cut(s) | 93, 391, 919, 952, 1432 |
| MunI | CAATTG | 1 cut(s) | 1108 |
| MvaI | CCWGG | 1 cut(s) | 93 |
| MvnI | CGCG | 3 cut(s) | 254, 1935, 1965 |
| NciI | CCSGG | 4 cut(s) | 391, 919, 952, 1432 |
| NlaIII | CATG | 6 cut(s) | 493, 526, 678, 1823, 1930, 1949 |
| NlaIV | GGNNCC | 3 cut(s) | 51, 1386, 1986 |
| NmeAIII | GCCGAG | 1 cut(s) | 1630 |
| NmuCI | GTSAC | 3 cut(s) | 383, 646, 2191 |
| NsbI | TGCGCA | 1 cut(s) | 1666 |
| OliI | CACNNNNGTG | 1 cut(s) | 2233 |
| PagI | TCATGA | 1 cut(s) | 1926 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2264 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1481, 1595, 2205 |
| PfeI | GAWTC | 9 cut(s) | 146, 191, 372, 394, 469, 821, 1354, 1575, 1659 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 98 |
| PfoI | TCCNGGA | 2 cut(s) | 389, 1430 |
| PkrI | GCNGC | 7 cut(s) | 233, 381, 641, 817, 1005, 1650, 1686 |
| PleI | GAGTC | 2 cut(s) | 380, 2442 |
| PpsI | GAGTC | 2 cut(s) | 380, 2442 |
| Ppu21I | YACGTR | 1 cut(s) | 59 |
| Psp6I | CCWGG | 1 cut(s) | 91 |
| PspGI | CCWGG | 1 cut(s) | 91 |
| PspN4I | GGNNCC | 3 cut(s) | 51, 1386, 1986 |
| PspPI | GGNCC | 5 cut(s) | 249, 872, 2311, 2405, 2456 |
| PsuI | RGATCY | 3 cut(s) | 49, 104, 1459 |
| RsaI | GTAC | 2 cut(s) | 1237, 1531 |
| RsaNI | GTAC | 2 cut(s) | 1236, 1530 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1958, 2233 |
| Rsr2I | CGGWCCG | 1 cut(s) | 2456 |
| RsrII | CGGWCCG | 1 cut(s) | 2456 |
| SaqAI | TTAA | 6 cut(s) | 570, 578, 1182, 1779, 2060, 2364 |
| SatI | GCNGC | 7 cut(s) | 232, 380, 640, 816, 1004, 1649, 1685 |
| Sau96I | GGNCC | 5 cut(s) | 249, 872, 2311, 2405, 2456 |
| ScaI | AGTACT | 1 cut(s) | 1237 |
| SchI | GAGTC | 2 cut(s) | 380, 2442 |
| ScrFI | CCNGG | 5 cut(s) | 93, 391, 919, 952, 1432 |
| SduI | GDGCHC | 2 cut(s) | 934, 1678 |
| SfaNI | GCATC | 4 cut(s) | 93, 818, 1425, 1822 |
| SinI | GGWCC | 4 cut(s) | 249, 2311, 2405, 2456 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1958, 2233 |
| SmlI | CTYRAG | 4 cut(s) | 536, 585, 1389, 2353 |
| SmoI | CTYRAG | 4 cut(s) | 536, 585, 1389, 2353 |
| Sse9I | AATT | 8 cut(s) | 115, 277, 349, 670, 1108, 1150, 1595, 2428 |
| SspMI | CTAG | 7 cut(s) | 501, 840, 1007, 1553, 1760, 2054, 2322 |
| StyD4I | CCNGG | 5 cut(s) | 91, 389, 917, 950, 1430 |
| StyI | CCWWGG | 4 cut(s) | 664, 978, 1120, 1896 |
| TaaI | ACNGT | 6 cut(s) | 776, 1025, 1142, 1315, 2409, 2423 |
| TaiI | ACGT | 3 cut(s) | 32, 61, 2399 |
| TaqI | TCGA | 9 cut(s) | 144, 297, 375, 425, 515, 827, 2166, 2267, 2342 |
| TaqII | GACCGA | 3 cut(s) | 924, 1507, 1568 |
| TasI | AATT | 8 cut(s) | 115, 277, 349, 670, 1108, 1150, 1595, 2428 |
| TatI | WGTACW | 1 cut(s) | 1235 |
| TauI | GCSGC | 2 cut(s) | 642, 1651 |
| TfiI | GAWTC | 9 cut(s) | 146, 191, 372, 394, 469, 821, 1354, 1575, 1659 |
| Tru1I | TTAA | 6 cut(s) | 570, 578, 1182, 1779, 2060, 2364 |
| Tru9I | TTAA | 6 cut(s) | 570, 578, 1182, 1779, 2060, 2364 |
| TscAI | CASTG | 2 cut(s) | 1853, 2428 |
| TseFI | GTSAC | 3 cut(s) | 383, 646, 2191 |
| TseI | GCWGC | 5 cut(s) | 231, 379, 815, 1003, 1684 |
| Tsp45I | GTSAC | 3 cut(s) | 383, 646, 2191 |
| TspGWI | ACGGA | 7 cut(s) | 184, 321, 400, 432, 1047, 1275, 2055 |
| TspRI | CASTG | 2 cut(s) | 1853, 2428 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 98 |
| VpaK11BI | GGWCC | 4 cut(s) | 249, 2311, 2405, 2456 |
| XapI | RAATTY | 2 cut(s) | 670, 1595 |
| XbaI | TCTAGA | 1 cut(s) | 1759 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1142, 1714 |
| XmiI | GTMKAC | 2 cut(s) | 1029, 2239 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1481, 1595, 2205 |
| XspI | CTAG | 7 cut(s) | 501, 840, 1007, 1553, 1760, 2054, 2322 |
| ZrmI | AGTACT | 1 cut(s) | 1237 |