Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0002245

Physical Location & Seq

Genomic Coordinates Forward (+)

64121555 .. 64123672

Gene Structure 2118 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010199

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

ATGGGCTCCCCAGTTTCTAGTTCCGATAAATTTGTGTTTGATAACAAGGGTAGTTTGTCTTTGAAAAAAAGTGGAAGTGTGGTTTGGTCTGTAGATACTGGTGGCAAAACAGTTACTGCAATGGAGTTGTGGGACTCGGGAAATTTGGTTTTGCTTGGGAATCACAATGGAGTAGTTTGGCAGAGTTTTAGTCATCCAACTGATACTCTATTATGGAACCAGGAGTTTCAGGAAGGAATGAAACTTCAAAGCAAACCAAGCTCCAACAATGTGACCTACATTCTTGAAATCAAGTCCGGCGACTTGATTCTTTCTGCTGGTTACCAAACACCACAGCCTTATTGGTCCATGGGGAAGGAAAGCCGTAAAACAATCAACACAGAAGGTGGGGCAGTCACTTCGGCATCTATCAGTGCAAATTCATGGAAGTTCTATGATAGTTCCAAAGTGCGACTATGGCAATTCATTTTCTCATCCAATGTTGATGTTAATGCCACATGGATTGCAGTTTTGGGAAATGATGGATTTATTTCTTTTTCCAATCTTCAGAATGGAGGTTCAAATGGTCCTTCAACGACGAAAATACCAGGGGACCCATGCAGCACCCCCGAACCTTGTGATGCATATGTTGAATGTTTCAGCAACAACAAGTGCCGGTGCCCTTCAGGTCTTAGCTCCCATGCGAATTGCAAGTCGGGGATTGTCACCTCATGTTCAAAGGGTTCTACAATGCTTACAACTGCTGGTGATGGGCTCTATTATTTTGCATTGGAATTTGTTTCACCCTCTTCAAGAACTCACTTGGAGGGTTGCAAAAGCTCTTGCCGTAGTAATTGCTCATGTGTTGCTTTGTTCTATCAAAACAGTACAAGAAATTGTTATATGTTCGACAGGATAGGTAGCTTCCAAAAGTCCGACAAGGGCTTTGTTTCTTATGTTAAAGTGTCGAGTGATGGAGGCAGTGGGGGCAGCGGAAGCAAGAAATACTTCCCTTATATTGCTGTTTCGACTGCAGTTGTTATCTGTGGCCTACTCTTTGCAGGATACCGATACTACCAGAGGAAGAGAGATGCCCCACTATCTCCTGACGATACTTCAGAAGAGGATAATTTCTTGGAAAATTTAACTGGTATGCCCATCCGTTTCAGTTACAAGAATCTCCAAACTGCAACGAATAACTTCTCAAAGAAGCTTGGGCAAGGAGGTTTTGGATCAGTTTATGAAGGAGTTCTTCCAGATGGAACCCGACTGGCTGTGAAGAAGTTGGAAGGAATTGGTCAGGGGAAGAAAGAGTTCCGAGCTGAAGTAACCACCATTGGCTGTATCCGTCATTTTCACTTGGTCCGGCTCAAAGGATTCTGTGTGGAAGGAAGCCATCGACTTCTTGCTTATGAATACATGGGAAATGGTTCCTTGGATAAATGGATTTTCAAGAAAACAAATGAAGAATGCTTATTGGATTGGGAGAAAAGGTTCAACATAGCAGTGGGTACTGCCAAAGGACTAGCTTATCTGCATGAAGATTGTGATTCAAAGATTATTCACTGTGACATAAAGCCTCAAAACGTGCTCCTCGACAACAATTACCATGCCAAAGTCGCAGATTTCGGTTTGGCAAAGCTAATGACCAAGGAGCAGAGCCATGTTTTCACAACACTTAGAGGAACTCGGGGTTACCTTGCGCCAGAGTGGATCACAAACCGCGCTATATCGGAGAAGAGTGATGTGTATAGCTATGGAATGCTGTTGCTAGAGATCATCGGTGGGAGAAAGAACTATGACCAATCAGAAAGTTCTGAAAAATCTCAATTTCCATCCTATGCCTTCAAGATGCTAGAAGAAGGCAAAATGAAGGACATTGTCGACTCCAAGCTGAAGATAGATGACGCCGACGAGAGGGTTTCTACTGCGATTATTGTTGCATTGTGGTGTATACAGCAAGACACGTCTCTGAGGCCATCGATGGCCAAGGTTGTCCAAATCTTTGAAGGGGTCTGTCCTGTTCCTCAGCCTCCAACTTCTTCAGCAATGATTTCTTCAACAATGACTTCCTCCGGACCAACGTGCTGCAACAGTGATGCATATTTGTCTGCAGAGCATCTTTCTGGACCAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019899 GO:0031625 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044464 GO:0046777 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr

Protein Analysis

706

Amino Acids

77.41

Weight (kDa)

8.07

Isoelectric Point (pI)

36.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	7 - 77	3.2e-12	D-mannose binding lectin
PK_Tyr_Ser-Thr	PF07714	394 - 660	3.4e-42	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	395 - 660	3.4e-50	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002245)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32300
fragaria_vesca	FvH4_2g29050 FvH4_2g29070
malus_domestica	MD00G1144200.v1.1 MD15G1121900.v1.1 MD15G1122800.v1.1 MD15G1125500.v1.1
prunus_persica	Prupe.1G481100_v2.0.a1
pyrus_communis	pycom15g10990 pycom15g11300
rosa_chinensis	RchiOBHm_Chr4g0385931 RchiOBHm_Chr6g0297921 RchiOBHm_Chr6g0297931
rosa_laevigata	RLG00000010199 RLG00000011550 RLG00000011551
rosa_multiflora	Rmu_co8186410.1_g000001 Rmu_sc0007302.1_g000003 Rmu_sc0007302.1_g000004 Rmu_sc0007400.1_g000011 Rmu_sc0011097.1_g000002 Rmu_sc0011097.1_g000003 Rmu_sc0011097.1_g000004 Rmu_sc0015868.1_g000001 Rmu_sc0030316.1_g000001
rosa_roxburghii	Rroxscaffold_5G00333530 Rroxscaffold_7G00170060 Rroxscaffold_7G00178900 Rroxscaffold_7G00178910
rosa_rugosa	Rorug03G0303100 Rorug06G0276800
rosa_samantha	Rh4CG008200 Rh4DG007100 Rh6AG387500 Rh6BG395900 Rh6CG401600 Rh6CG401700 Rh6CG401800 Rh6DG388100
rosa_wichuraiana	Rw4G000320 Rw6G033760 Rw6G033810 Rw6G033820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	657
AccI	GTMKAC	2 cut(s)	1863, 1933
AccII	CGCG	1 cut(s)	1704
AccIII	TCCGGA	1 cut(s)	2054
AciI	CCGC	2 cut(s)	972, 1702
AclWI	GGATC	2 cut(s)	1219, 1700
AcoI	YGGCCR	1 cut(s)	1965
AcsI	RAATTY	5 cut(s)	29, 142, 418, 773, 1120
AcuI	CTGAAG	6 cut(s)	530, 648, 1080, 1323, 1895, 2007
AcyI	GRCGYC	1 cut(s)	1887
AfaI	GTAC	2 cut(s)	868, 1492
AfiI	CCNNNNNNNGG	1 cut(s)	1896
AflIII	ACRYGT	1 cut(s)	1944
AjiI	CACGTC	1 cut(s)	1947
AjnI	CCWGG	2 cut(s)	219, 586
AjuI	GAANNNNNNNTTGG	2 cut(s)	67, 99
AloI	GAACNNNNNNTCC	2 cut(s)	1457, 1489
Alw21I	GWGCWC	1 cut(s)	1572
Alw26I	GTCTC	1 cut(s)	1953
AlwI	GGATC	2 cut(s)	1219, 1700
AlwNI	CAGNNNCTG	1 cut(s)	116
Ama87I	CYCGRG	2 cut(s)	136, 1668
Aor13HI	TCCGGA	1 cut(s)	2054
AoxI	GGCC	3 cut(s)	1027, 1955, 1965
ApeKI	GCWGC	3 cut(s)	600, 969, 2067
ApoI	RAATTY	5 cut(s)	29, 142, 418, 773, 1120
ArsI	GACNNNNNNTTYG	4 cut(s)	677, 709, 908, 940
Asp700I	GAANNNNTTC	6 cut(s)	986, 1178, 1227, 1292, 1408, 1472
AspLEI	GCGC	2 cut(s)	1684, 1706
AspS9I	GGNCC	6 cut(s)	345, 566, 592, 1342, 2057, 2108
AsuHPI	GGTGA	3 cut(s)	697, 758, 774
AvaI	CYCGRG	2 cut(s)	136, 1668
AvaII	GGWCC	6 cut(s)	345, 566, 592, 1342, 2057, 2108
BaeGI	GKGCMC	1 cut(s)	662
BalI	TGGCCA	1 cut(s)	1967
BanI	GGYRCC	1 cut(s)	657
BanII	GRGCYC	2 cut(s)	8, 756
Bbv12I	GWGCWC	1 cut(s)	1572
BbvCI	CCTCAGC	1 cut(s)	2007
BbvI	GCAGC	3 cut(s)	612, 981, 2054
BccI	CCATC	9 cut(s)	515, 743, 947, 1145, 1232, 1383, 1822, 1957, 1966
BceAI	ACGGC	2 cut(s)	348, 810
BcgI	CGANNNNNNTGC	2 cut(s)	381, 415
BciT130I	CCWGG	2 cut(s)	221, 588
BciVI	GTATCC	2 cut(s)	1037, 1334
BcoDI	GTCTC	1 cut(s)	1953
BfaI	CTAG	4 cut(s)	18, 1505, 1751, 1835
BfmI	CTRYAG	3 cut(s)	90, 1011, 2091
BfuI	GTATCC	2 cut(s)	1037, 1334
BisI	GCNGC	3 cut(s)	601, 970, 2068
BlsI	GCNGC	3 cut(s)	602, 971, 2069
Bme1390I	CCNGG	2 cut(s)	221, 588
Bme18I	GGWCC	6 cut(s)	345, 566, 592, 1342, 2057, 2108
BmeT110I	CYCGRG	2 cut(s)	136, 1668
BmgBI	CACGTC	1 cut(s)	1947
BmgT120I	GGNCC	6 cut(s)	345, 566, 592, 1342, 2057, 2108
BmiI	GGNNCC	7 cut(s)	7, 218, 593, 594, 659, 1243, 1411
BmrFI	CCNGG	2 cut(s)	221, 588
BmrI	ACTGGG	1 cut(s)	5
BmsI	GCATC	6 cut(s)	413, 610, 1060, 1821, 2068, 2107
BmuI	ACTGGG	1 cut(s)	5
Bpu10I	CCTNAGC	1 cut(s)	2007
Bsa29I	ATCGAT	1 cut(s)	1961
BsaHI	GRCGYC	1 cut(s)	1887
BsaJI	CCNNGG	5 cut(s)	348, 587, 1413, 1629, 1968
BsaWI	WCCGGW	1 cut(s)	2054
BsaXI	ACNNNNNCTCC	2 cut(s)	1457, 1487
Bsc4I	CCNNNNNNNGG	1 cut(s)	1896
Bse118I	RCCGGY	1 cut(s)	654
Bse1I	ACTGG	4 cut(s)	11, 103, 1132, 1254
Bse3DI	GCAATG	2 cut(s)	126, 2034
BseAI	TCCGGA	1 cut(s)	2054
BseBI	CCWGG	2 cut(s)	221, 588
BseCI	ATCGAT	1 cut(s)	1961
BseDI	CCNNGG	5 cut(s)	348, 587, 1413, 1629, 1968
BseGI	GGATG	4 cut(s)	193, 473, 1137, 1814
BseLI	CCNNNNNNNGG	1 cut(s)	1896
BseMI	GCAATG	2 cut(s)	126, 2034
BseMII	CTCAG	2 cut(s)	1943, 2021
BseNI	ACTGG	4 cut(s)	11, 103, 1132, 1254
BseRI	GAGGAG	1 cut(s)	1562
BseSI	GKGCMC	1 cut(s)	662
BseXI	GCAGC	3 cut(s)	612, 981, 2054
Bsh1236I	CGCG	1 cut(s)	1704
BshFI	GGCC	3 cut(s)	1029, 1957, 1967
BshNI	GGYRCC	1 cut(s)	657
BshVI	ATCGAT	1 cut(s)	1961
BsiHKAI	GWGCWC	1 cut(s)	1572
BsiHKCI	CYCGRG	2 cut(s)	136, 1668
BsiSI	CCGG	4 cut(s)	297, 655, 1345, 2055
BslFI	GGGAC	2 cut(s)	146, 605
BslI	CCNNNNNNNGG	1 cut(s)	1896
BsmAI	GTCTC	1 cut(s)	1953
BsmBI	CGTCTC	1 cut(s)	1953
BsmFI	GGGAC	2 cut(s)	146, 605
BsmI	GAATGC	2 cut(s)	1454, 1746
BsnI	GGCC	3 cut(s)	1029, 1957, 1967
BsoBI	CYCGRG	2 cut(s)	136, 1668
Bsp1286I	GDGCHC	4 cut(s)	8, 662, 756, 1572
Bsp13I	TCCGGA	1 cut(s)	2054
Bsp143I	GATC	3 cut(s)	1211, 1692, 1755
Bsp19I	CCATGG	1 cut(s)	348
BspACI	CCGC	2 cut(s)	972, 1702
BspANI	GGCC	3 cut(s)	1029, 1957, 1967
BspCNI	CTCAG	2 cut(s)	1944, 2020
BspDI	ATCGAT	1 cut(s)	1961
BspEI	TCCGGA	1 cut(s)	2054
BspFNI	CGCG	1 cut(s)	1704
BspLI	GGNNCC	7 cut(s)	7, 218, 593, 594, 659, 1243, 1411
BspMAI	CTGCAG	2 cut(s)	1015, 2095
BspPI	GGATC	2 cut(s)	1219, 1700
BspT107I	GGYRCC	1 cut(s)	657
BsrDI	GCAATG	2 cut(s)	126, 2034
BsrFI	RCCGGY	1 cut(s)	654
BsrI	ACTGG	4 cut(s)	11, 103, 1132, 1254
BssAI	RCCGGY	1 cut(s)	654
BssECI	CCNNGG	5 cut(s)	348, 587, 1413, 1629, 1968
BssMI	GATC	3 cut(s)	1211, 1692, 1755
BssNAI	GTATAC	1 cut(s)	1934
BssNI	GRCGYC	1 cut(s)	1887
BssT1I	CCWWGG	4 cut(s)	348, 1413, 1629, 1968
Bst1107I	GTATAC	1 cut(s)	1934
Bst2UI	CCWGG	2 cut(s)	221, 588
Bst4CI	ACNGT	4 cut(s)	112, 866, 1547, 2075
Bst6I	CTCTTC	4 cut(s)	793, 1058, 1095, 1712
BstACI	GRCGYC	1 cut(s)	1887
BstDEI	CTNAG	4 cut(s)	671, 1658, 1952, 2007
BstDSI	CCRYGG	1 cut(s)	348
BstEII	GGTNACC	2 cut(s)	320, 1673
BstF5I	GGATG	4 cut(s)	193, 473, 1137, 1814
BstFNI	CGCG	1 cut(s)	1704
BstHHI	GCGC	2 cut(s)	1684, 1706
BstKTI	GATC	3 cut(s)	1214, 1695, 1758
BstMAI	GTCTC	1 cut(s)	1953
BstMBI	GATC	3 cut(s)	1211, 1692, 1755
BstMWI	GCNNNNNNNGC	5 cut(s)	258, 457, 966, 975, 1598
BstNI	CCWGG	2 cut(s)	221, 588
BstPI	GGTNACC	2 cut(s)	320, 1673
BstSCI	CCNGG	2 cut(s)	219, 586
BstSFI	CTRYAG	3 cut(s)	90, 1011, 2091
BstSLI	GKGCMC	1 cut(s)	662
BstUI	CGCG	1 cut(s)	1704
BstV1I	GCAGC	3 cut(s)	612, 981, 2054
BstZ17I	GTATAC	1 cut(s)	1934
Bsu15I	ATCGAT	1 cut(s)	1961
BsuI	GTATCC	2 cut(s)	1037, 1334
BsuRI	GGCC	3 cut(s)	1029, 1957, 1967
BsuTUI	ATCGAT	1 cut(s)	1961
BtgI	CCRYGG	1 cut(s)	348
BtrI	CACGTC	1 cut(s)	1947
BtsCI	GGATG	4 cut(s)	193, 473, 1137, 1814
BtsI	GCAGTG	2 cut(s)	967, 1491
BtsIMutI	CAGTG	5 cut(s)	418, 967, 1491, 1543, 2080
CaiI	CAGNNNCTG	1 cut(s)	116
CfoI	GCGC	2 cut(s)	1684, 1706
Cfr10I	RCCGGY	1 cut(s)	654
Cfr13I	GGNCC	6 cut(s)	345, 566, 592, 1342, 2057, 2108
ClaI	ATCGAT	1 cut(s)	1961
CseI	GACGC	1 cut(s)	1895
Csp6I	GTAC	2 cut(s)	867, 1491
CspCI	CAANNNNNGTGG	2 cut(s)	484, 519
CviQI	GTAC	2 cut(s)	867, 1491
DdeI	CTNAG	4 cut(s)	671, 1658, 1952, 2007
DpnI	GATC	3 cut(s)	1213, 1694, 1757
DpnII	GATC	3 cut(s)	1211, 1692, 1755
EaeI	YGGCCR	1 cut(s)	1965
Eam1104I	CTCTTC	4 cut(s)	793, 1058, 1095, 1712
EarI	CTCTTC	4 cut(s)	793, 1058, 1095, 1712
Eco130I	CCWWGG	4 cut(s)	348, 1413, 1629, 1968
Eco24I	GRGCYC	2 cut(s)	8, 756
Eco47I	GGWCC	6 cut(s)	345, 566, 592, 1342, 2057, 2108
Eco57I	CTGAAG	6 cut(s)	530, 648, 1080, 1323, 1895, 2007
Eco88I	CYCGRG	2 cut(s)	136, 1668
Eco91I	GGTNACC	2 cut(s)	320, 1673
EcoO109I	RGGNCCY	1 cut(s)	592
EcoO65I	GGTNACC	2 cut(s)	320, 1673
EcoRII	CCWGG	2 cut(s)	219, 586
EcoT14I	CCWWGG	4 cut(s)	348, 1413, 1629, 1968
EcoT22I	ATGCAT	2 cut(s)	625, 2083
EcoT38I	GRGCYC	2 cut(s)	8, 756
ErhI	CCWWGG	4 cut(s)	348, 1413, 1629, 1968
Esp3I	CGTCTC	1 cut(s)	1953
FalI	AAGNNNNNCTT	4 cut(s)	971, 1003, 1215, 1247
FaqI	GGGAC	2 cut(s)	146, 605
FauNDI	CATATG	1 cut(s)	625
FblI	GTMKAC	2 cut(s)	1863, 1933
Fnu4HI	GCNGC	3 cut(s)	601, 970, 2068
FokI	GGATG	4 cut(s)	180, 460, 1124, 1801
FriOI	GRGCYC	2 cut(s)	8, 756
Fsp4HI	GCNGC	3 cut(s)	601, 970, 2068
FspBI	CTAG	4 cut(s)	18, 1505, 1751, 1835
GlaI	GCGC	2 cut(s)	1683, 1705
GluI	GCNGC	3 cut(s)	601, 970, 2068
HaeIII	GGCC	3 cut(s)	1029, 1957, 1967
HapII	CCGG	4 cut(s)	297, 655, 1345, 2055
HgaI	GACGC	1 cut(s)	1895
HhaI	GCGC	2 cut(s)	1684, 1706
Hin1I	GRCGYC	1 cut(s)	1887
Hin6I	GCGC	2 cut(s)	1682, 1704
HinP1I	GCGC	2 cut(s)	1682, 1704
HincII	GTYRAC	1 cut(s)	1864
HindII	GTYRAC	1 cut(s)	1864
HindIII	AAGCTT	1 cut(s)	1190
HinfI	GANTC	7 cut(s)	134, 160, 307, 1156, 1356, 1529, 1865
HpaII	CCGG	4 cut(s)	297, 655, 1345, 2055
HphI	GGTGA	3 cut(s)	697, 758, 774
Hpy166II	GTNNAC	2 cut(s)	1864, 1934
Hpy188I	TCNGA	9 cut(s)	25, 549, 916, 1099, 1298, 1714, 1789, 1798, 1953
Hpy8I	GTNNAC	2 cut(s)	1864, 1934
Hpy99I	CGWCG	2 cut(s)	580, 1895
HpyCH4III	ACNGT	4 cut(s)	112, 866, 1547, 2075
HpyCH4IV	ACGT	3 cut(s)	1566, 1946, 2063
HpyF10VI	GCNNNNNNNGC	5 cut(s)	258, 457, 966, 975, 1598
HpyF3I	CTNAG	4 cut(s)	671, 1658, 1952, 2007
HpySE526I	ACGT	3 cut(s)	1566, 1946, 2063
Hsp92I	GRCGYC	1 cut(s)	1887
HspAI	GCGC	2 cut(s)	1682, 1704
KflI	GGGWCCC	1 cut(s)	592
Kpn2I	TCCGGA	1 cut(s)	2054
Kzo9I	GATC	3 cut(s)	1211, 1692, 1755
LmnI	GCTCC	5 cut(s)	11, 266, 680, 1575, 1633
Lsp1109I	GCAGC	3 cut(s)	612, 981, 2054
LweI	GCATC	6 cut(s)	413, 610, 1060, 1821, 2068, 2107
MaeI	CTAG	4 cut(s)	18, 1505, 1751, 1835
MaeII	ACGT	3 cut(s)	1566, 1946, 2063
MaeIII	GTNAC	9 cut(s)	112, 271, 320, 394, 703, 1148, 1306, 1547, 1673
MalI	GATC	3 cut(s)	1213, 1694, 1757
MboI	GATC	3 cut(s)	1211, 1692, 1755
MhlI	GDGCHC	4 cut(s)	8, 662, 756, 1572
MlsI	TGGCCA	1 cut(s)	1967
MluNI	TGGCCA	1 cut(s)	1967
MlyI	GAGTC	2 cut(s)	128, 1859
MmeI	TCCRAC	5 cut(s)	221, 288, 939, 1245, 2039
Mox20I	TGGCCA	1 cut(s)	1967
Mph1103I	ATGCAT	2 cut(s)	625, 2083
MroI	TCCGGA	1 cut(s)	2054
MroXI	GAANNNNTTC	6 cut(s)	986, 1178, 1227, 1292, 1408, 1472
MscI	TGGCCA	1 cut(s)	1967
MseI	TTAA	3 cut(s)	489, 939, 1124
MslI	CAYNNNNRTG	2 cut(s)	1484, 1927
Msp20I	TGGCCA	1 cut(s)	1967
MspA1I	CMGCKG	1 cut(s)	972
MspI	CCGG	4 cut(s)	297, 655, 1345, 2055
MspR9I	CCNGG	2 cut(s)	221, 588
Mva1269I	GAATGC	2 cut(s)	1454, 1746
MvaI	CCWGG	2 cut(s)	221, 588
MvnI	CGCG	1 cut(s)	1704
MwoI	GCNNNNNNNGC	5 cut(s)	258, 457, 966, 975, 1598
NcoI	CCATGG	1 cut(s)	348
NdeI	CATATG	1 cut(s)	625
NdeII	GATC	3 cut(s)	1211, 1692, 1755
NlaIV	GGNNCC	7 cut(s)	7, 218, 593, 594, 659, 1243, 1411
NmuCI	GTSAC	4 cut(s)	271, 394, 703, 1547
NsiI	ATGCAT	2 cut(s)	625, 2083
PcsI	WCGNNNNNNNCGW	1 cut(s)	1572
PctI	GAATGC	2 cut(s)	1454, 1746
PdmI	GAANNNNTTC	6 cut(s)	986, 1178, 1227, 1292, 1408, 1472
PfeI	GAWTC	5 cut(s)	160, 307, 1156, 1356, 1529
PflFI	GACNNNGTC	1 cut(s)	1859
PkrI	GCNGC	3 cut(s)	602, 971, 2069
PleI	GAGTC	2 cut(s)	128, 1859
PpsI	GAGTC	2 cut(s)	128, 1859
PpuMI	RGGWCCY	1 cut(s)	592
Psp5II	RGGWCCY	1 cut(s)	592
Psp6I	CCWGG	2 cut(s)	219, 586
PspEI	GGTNACC	2 cut(s)	320, 1673
PspGI	CCWGG	2 cut(s)	219, 586
PspN4I	GGNNCC	7 cut(s)	7, 218, 593, 594, 659, 1243, 1411
PspPI	GGNCC	6 cut(s)	345, 566, 592, 1342, 2057, 2108
PspPPI	RGGWCCY	1 cut(s)	592
PstI	CTGCAG	2 cut(s)	1015, 2095
PstNI	CAGNNNCTG	1 cut(s)	116
PsyI	GACNNNGTC	1 cut(s)	1859
RsaI	GTAC	2 cut(s)	868, 1492
RsaNI	GTAC	2 cut(s)	867, 1491
RseI	CAYNNNNRTG	2 cut(s)	1484, 1927
SalI	GTCGAC	1 cut(s)	1862
SaqAI	TTAA	3 cut(s)	489, 939, 1124
SatI	GCNGC	3 cut(s)	601, 970, 2068
Sau3AI	GATC	3 cut(s)	1211, 1692, 1755
Sau96I	GGNCC	6 cut(s)	345, 566, 592, 1342, 2057, 2108
SchI	GAGTC	2 cut(s)	128, 1859
ScrFI	CCNGG	2 cut(s)	221, 588
SduI	GDGCHC	4 cut(s)	8, 662, 756, 1572
SfaNI	GCATC	6 cut(s)	413, 610, 1060, 1821, 2068, 2107
SfcI	CTRYAG	3 cut(s)	90, 1011, 2091
SinI	GGWCC	6 cut(s)	345, 566, 592, 1342, 2057, 2108
SmiMI	CAYNNNNRTG	2 cut(s)	1484, 1927
SsiI	CCGC	2 cut(s)	972, 1702
SspMI	CTAG	4 cut(s)	18, 1505, 1751, 1835
StyD4I	CCNGG	2 cut(s)	219, 586
StyI	CCWWGG	4 cut(s)	348, 1413, 1629, 1968
TaaI	ACNGT	4 cut(s)	112, 866, 1547, 2075
TaiI	ACGT	3 cut(s)	1569, 1949, 2066
TaqI	TCGA	7 cut(s)	888, 947, 1007, 1378, 1575, 1863, 1961
TatI	WGTACW	1 cut(s)	866
TfiI	GAWTC	5 cut(s)	160, 307, 1156, 1356, 1529
Tru1I	TTAA	3 cut(s)	489, 939, 1124
Tru9I	TTAA	3 cut(s)	489, 939, 1124
TscAI	CASTG	5 cut(s)	418, 967, 1491, 1550, 2080
TseFI	GTSAC	4 cut(s)	271, 394, 703, 1547
TseI	GCWGC	3 cut(s)	600, 969, 2067
Tsp45I	GTSAC	4 cut(s)	271, 394, 703, 1547
TspDTI	ATGAA	8 cut(s)	254, 411, 454, 1236, 1407, 1458, 1533, 1865
TspGWI	ACGGA	2 cut(s)	1130, 1316
TspRI	CASTG	5 cut(s)	418, 967, 1491, 1550, 2080
Tth111I	GACNNNGTC	1 cut(s)	1859
VpaK11BI	GGWCC	6 cut(s)	345, 566, 592, 1342, 2057, 2108
XapI	RAATTY	5 cut(s)	29, 142, 418, 773, 1120
XcmI	CCANNNNNNNNNTGG	1 cut(s)	339
XmiI	GTMKAC	2 cut(s)	1863, 1933
XmnI	GAANNNNTTC	6 cut(s)	986, 1178, 1227, 1292, 1408, 1472
XspI	CTAG	4 cut(s)	18, 1505, 1751, 1835
Zsp2I	ATGCAT	2 cut(s)	625, 2083

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.