Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011097.1

Orthogroup ID

OG0002245

Physical Location & Seq

Genomic Coordinates Reverse (-)

4799 .. 7234

Gene Structure 2436 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011097.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2436 bp

atgggaggttggaatctcattcatttcataggcttcatattgttgtctgttctcctcttgtcgaagacctgcctggctagtgttaaaaattttgggaaaattagtccggggtttcaaggggctcagatggattggattgacaataatgggctgtttctcttgtctaatcaatccgattttgcttttggcttcgtcaccactcctcaagatgtcactttgttcctgctttgtattgtccacatggacggcaggaatatagtatggactgcaaacaggggttccccagtttctaattctgatcaatttgtgtttgatgataagggtagtgtgatgttgcaaaaaggtggaagtgtggtttggtctatagatactggtggcaaatcagtttctgcaatggaattgcaggactctggaaatttggttttgcttggggatgacaatggggtagtttggcagagttttagtcatccaactgatactctattatggaaccaggagtttcaggaaggaatgaaacttcaaagcgaaccaagctccaacaatgtgacctatattctagaaatcaagtccggcgacttgattctctctgcaggtttccaaacaccacagccttattggtccatggggaaggaaagccgtaaaacaatcaacacaggtggtggggcagtcacttcagcttctatcagtgcaaattcatggaagttttatgatagttctaaagtgctattatggcaatttattttctcatccaatgttgatgctaacgccacatggattgcagttttgggaaatgatgggtttatttctttttccaatcttcagaatggagattcaaatggtccttcaacaacgaaaataccaggggactcatgcagcacccccgaaccttgtgatgcatattttgaatgtttcagcaacaacaagtgccagtgcccttcaggtctcagctcccatgcgaattgcaagtcggggattgtcacctcatgttcaaagggttctacaacgcttacaagtgctggtgatgggctttattattttgcattgggatttgtttcaccctcttcaagaactgacttggaaggttgcaaaagctcctgccttggtaattgttcatgtgttgctctgttctatcaaaacaatacaagaagttgttttatgtttgacaggataggtagcttccaagattccgattccgacaagggctttgtttcttatgttaaagtgttgagtgatggaggcagtgggggcagcggaagcaagaaacacttcccttatgttgcgatcattgctgtttcgacagtagttgttatctgtggcctactctttgcaggataccgatactaccagaggaagagagatgcaccaccatctcctgaagatgcttcagaagaggataatttcctggaaaatttaactgggatgccaatccgtttcagttacaaggatcttgaaactgcaactaacaacttctcaaagaagcttgggcaaggaggttttggctcggtttacgaaggggttctcccagatggaactcgacttgctgtgaagaagttggaaggcatcggtcagggaaagaaagagtttcgagctgaagttagcatcataggcagtatccatcacctgcacttggtccggctccggggcttctgtgcagaagggagctatagacttcttgcttacgagtacatggcaaatggatccctggacaaatggatattcaggaaaaaagatgaagagttcctattggattgggagacaagattcaacatagcagtgggtacagccaaaggactagcttatctccatgaagattgtgattcaaagattattcactgcgacataaagcctgaaaacgtgctcctcgacaacaattaccatgccaaagtctcagatttcggtttggcaaagctgatgacccgggagcagagccatgtcttcacaacaatgcgaggaactcgagggtaccttgccccagagtggatcacaaactacgctatttcggagaaaagtgacgtgtacagctacggaatgctgctgctggagatcattggtggaagaaagaactatgacccatcagaaacctctggaaaatcgcattttccatcgtatgccttcaagatgttggaagaagggaaactcaaggacatcttcgaccccaaggtgaatatagatgacgttgacgagagggtgtctactgcggttatggtagcattgtggtgtatacaggaagacatgactttgaggccagcaatgacgaaggttgtccaaatgcttgaaggcatctgctccgttcctcagcctccaacttcctcaacaatggggtcacgccttcactcgagtttcttcaaatcaatgagtgaagggggaacttcctcaggtccatcggactgcaacagcgatgccctttctgcagtgcgcctttccgggccaagataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019899 GO:0031625 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044464 GO:0046777 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr

Protein Analysis

811

Amino Acids

88.74

Weight (kDa)

5.57

Isoelectric Point (pI)

36.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002245)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32300
fragaria_vesca	FvH4_2g29050 FvH4_2g29070
malus_domestica	MD00G1144200.v1.1 MD15G1121900.v1.1 MD15G1122800.v1.1 MD15G1125500.v1.1
prunus_persica	Prupe.1G481100_v2.0.a1
pyrus_communis	pycom15g10990 pycom15g11300
rosa_chinensis	RchiOBHm_Chr4g0385931 RchiOBHm_Chr6g0297921 RchiOBHm_Chr6g0297931
rosa_laevigata	RLG00000010199 RLG00000011550 RLG00000011551
rosa_multiflora	Rmu_co8186410.1_g000001 Rmu_sc0007302.1_g000003 Rmu_sc0007302.1_g000004 Rmu_sc0007400.1_g000011 Rmu_sc0011097.1_g000002 Rmu_sc0011097.1_g000003 Rmu_sc0011097.1_g000004 Rmu_sc0015868.1_g000001 Rmu_sc0030316.1_g000001
rosa_roxburghii	Rroxscaffold_5G00333530 Rroxscaffold_7G00170060 Rroxscaffold_7G00178900 Rroxscaffold_7G00178910
rosa_rugosa	Rorug03G0303100 Rorug06G0276800
rosa_samantha	Rh4CG008200 Rh4DG007100 Rh6AG387500 Rh6BG395900 Rh6CG401600 Rh6CG401700 Rh6CG401800 Rh6DG388100
rosa_wichuraiana	Rw4G000320 Rw6G033760 Rw6G033810 Rw6G033820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1629
Acc36I	ACCTGC	3 cut(s)	77, 581, 1629
Acc65I	GGTACC	1 cut(s)	1962
AccB1I	GGYRCC	1 cut(s)	1962
AccI	GTMKAC	2 cut(s)	2192, 2221
AciI	CCGC	2 cut(s)	1251, 2198
AclWI	GGATC	4 cut(s)	1452, 1692, 1705, 1988
AcsI	RAATTY	4 cut(s)	88, 415, 691, 1408
AcuI	CTGAAG	6 cut(s)	657, 803, 921, 1368, 1395, 1611
AfaI	GTAC	4 cut(s)	1685, 1780, 1964, 2018
AfiI	CCNNNNNNNGG	3 cut(s)	1627, 1639, 1977
AflIII	ACRYGT	1 cut(s)	2013
AjiI	CACGTC	1 cut(s)	2014
AjnI	CCWGG	5 cut(s)	72, 492, 859, 1401, 1701
AjuI	GAANNNNNNNTTGG	2 cut(s)	340, 372
Alw21I	GWGCWC	1 cut(s)	1860
Alw26I	GTCTC	3 cut(s)	947, 1748, 1891
AlwI	GGATC	4 cut(s)	1452, 1692, 1705, 1988
AlwNI	CAGNNNCTG	1 cut(s)	389
Ama87I	CYCGRG	3 cut(s)	1917, 1956, 2335
AoxI	GGCC	3 cut(s)	1315, 2243, 2426
ApeKI	GCWGC	4 cut(s)	873, 1248, 2032, 2035
ApoI	RAATTY	4 cut(s)	88, 415, 691, 1408
ArsI	GACNNNNNNTTYG	4 cut(s)	950, 982, 1187, 1219
Asp700I	GAANNNNTTC	2 cut(s)	1265, 1515
Asp718I	GGTACC	1 cut(s)	1962
AspLEI	GCGC	1 cut(s)	2418
AspS9I	GGNCC	5 cut(s)	618, 839, 1630, 2378, 2426
AsuC2I	CCSGG	5 cut(s)	108, 1640, 1918, 1919, 2425
AsuHPI	GGTGA	6 cut(s)	187, 970, 1031, 1047, 1610, 2173
AvaI	CYCGRG	3 cut(s)	1917, 1956, 2335
AvaII	GGWCC	4 cut(s)	618, 839, 1630, 2378
AxyI	CCTNAGG	1 cut(s)	2374
BaeGI	GKGCMC	1 cut(s)	935
BamHI	GGATCC	1 cut(s)	1697
BanI	GGYRCC	1 cut(s)	1962
BanII	GRGCYC	1 cut(s)	124
BbsI	GAAGAC	3 cut(s)	71, 1927, 2235
Bbv12I	GWGCWC	1 cut(s)	1860
BbvCI	CCTCAGC	1 cut(s)	2295
BbvI	GCAGC	4 cut(s)	885, 1260, 2019, 2022
BceAI	ACGGC	2 cut(s)	262, 621
BciT130I	CCWGG	5 cut(s)	74, 494, 861, 1403, 1703
BciVI	GTATCC	2 cut(s)	1325, 1622
BclI	TGATCA	1 cut(s)	298
BcnI	CCSGG	5 cut(s)	108, 1640, 1918, 1919, 2425
BcoDI	GTCTC	3 cut(s)	947, 1748, 1891
BfaI	CTAG	3 cut(s)	78, 557, 1793
BfmI	CTRYAG	4 cut(s)	363, 588, 1663, 2409
BfuAI	ACCTGC	3 cut(s)	77, 581, 1629
BfuI	GTATCC	2 cut(s)	1325, 1622
BisI	GCNGC	4 cut(s)	874, 1249, 2033, 2036
BlsI	GCNGC	4 cut(s)	875, 1250, 2034, 2037
Bme18I	GGWCC	4 cut(s)	618, 839, 1630, 2378
BmeT110I	CYCGRG	3 cut(s)	1917, 1956, 2335
BmgBI	CACGTC	1 cut(s)	2014
BmgT120I	GGNCC	5 cut(s)	618, 839, 1630, 2378, 2426
BmiI	GGNNCC	5 cut(s)	280, 491, 1637, 1699, 1964
BmrI	ACTGGG	2 cut(s)	278, 1425
BmsI	GCATC	9 cut(s)	748, 883, 1348, 1369, 1410, 1569, 1608, 2289, 2389
BmuI	ACTGGG	2 cut(s)	278, 1425
BpiI	GAAGAC	3 cut(s)	71, 1927, 2235
BpmI	CTGGAG	1 cut(s)	2060
Bpu10I	CCTNAGC	1 cut(s)	2295
BpuEI	CTTGAG	2 cut(s)	189, 2123
BpuMI	CCSGG	5 cut(s)	108, 1640, 1918, 1919, 2425
BsaBI	GATNNNNATC	1 cut(s)	1424
BsaI	GGTCTC	1 cut(s)	947
BsaJI	CCNNGG	8 cut(s)	107, 621, 860, 1099, 1639, 1701, 1917, 2157
Bsc4I	CCNNNNNNNGG	3 cut(s)	1627, 1639, 1977
Bse1I	ACTGG	4 cut(s)	284, 376, 928, 1420
Bse21I	CCTNAGG	1 cut(s)	2374
Bse3DI	GCAATG	3 cut(s)	399, 1284, 2256
Bse8I	GATNNNNATC	1 cut(s)	1424
BseBI	CCWGG	5 cut(s)	74, 494, 861, 1403, 1703
BseDI	CCNNGG	8 cut(s)	107, 621, 860, 1099, 1639, 1701, 1917, 2157
BseGI	GGATG	4 cut(s)	439, 466, 746, 1425
BseJI	GATNNNNATC	1 cut(s)	1424
BseLI	CCNNNNNNNGG	3 cut(s)	1627, 1639, 1977
BseMI	GCAATG	3 cut(s)	399, 1284, 2256
BseMII	CTCAG	5 cut(s)	137, 958, 1902, 2309, 2388
BseNI	ACTGG	4 cut(s)	284, 376, 928, 1420
BseRI	GAGGAG	3 cut(s)	44, 192, 1850
BseSI	GKGCMC	1 cut(s)	935
BseXI	GCAGC	4 cut(s)	885, 1260, 2019, 2022
BsgI	GTGCAG	2 cut(s)	1607, 1671
BshFI	GGCC	3 cut(s)	1317, 2245, 2428
BshNI	GGYRCC	1 cut(s)	1962
BsiHKAI	GWGCWC	1 cut(s)	1860
BsiHKCI	CYCGRG	3 cut(s)	1917, 1956, 2335
BsiSI	CCGG	6 cut(s)	107, 570, 1633, 1639, 1918, 2424
BslFI	GGGAC	1 cut(s)	878
BslI	CCNNNNNNNGG	3 cut(s)	1627, 1639, 1977
BsmAI	GTCTC	3 cut(s)	947, 1748, 1891
BsmFI	GGGAC	1 cut(s)	878
BsmI	GAATGC	1 cut(s)	2034
BsnI	GGCC	3 cut(s)	1317, 2245, 2428
Bso31I	GGTCTC	1 cut(s)	947
BsoBI	CYCGRG	3 cut(s)	1917, 1956, 2335
Bsp1286I	GDGCHC	3 cut(s)	124, 935, 1860
Bsp1407I	TGTACA	1 cut(s)	2016
Bsp143I	GATC	6 cut(s)	298, 1281, 1444, 1697, 1980, 2043
Bsp19I	CCATGG	1 cut(s)	621
BspACI	CCGC	2 cut(s)	1251, 2198
BspANI	GGCC	3 cut(s)	1317, 2245, 2428
BspCNI	CTCAG	5 cut(s)	136, 957, 1901, 2308, 2387
BspLI	GGNNCC	5 cut(s)	280, 491, 1637, 1699, 1964
BspMAI	CTGCAG	2 cut(s)	592, 2413
BspMI	ACCTGC	3 cut(s)	77, 581, 1629
BspPI	GGATC	4 cut(s)	1452, 1692, 1705, 1988
BspT107I	GGYRCC	1 cut(s)	1962
BspTNI	GGTCTC	1 cut(s)	947
BsrDI	GCAATG	3 cut(s)	399, 1284, 2256
BsrGI	TGTACA	1 cut(s)	2016
BsrI	ACTGG	4 cut(s)	284, 376, 928, 1420
BssECI	CCNNGG	8 cut(s)	107, 621, 860, 1099, 1639, 1701, 1917, 2157
BssMI	GATC	6 cut(s)	298, 1281, 1444, 1697, 1980, 2043
BssNAI	GTATAC	1 cut(s)	2222
BssT1I	CCWWGG	3 cut(s)	621, 1099, 2157
Bst1107I	GTATAC	1 cut(s)	2222
Bst2UI	CCWGG	5 cut(s)	74, 494, 861, 1403, 1703
Bst4CI	ACNGT	1 cut(s)	1300
Bst6I	CTCTTC	4 cut(s)	1066, 1346, 1383, 1728
BstAUI	TGTACA	1 cut(s)	2016
BstC8I	GCNNGC	1 cut(s)	2247
BstDEI	CTNAG	5 cut(s)	123, 944, 1888, 2295, 2374
BstDSI	CCRYGG	1 cut(s)	621
BstF5I	GGATG	4 cut(s)	439, 466, 746, 1425
BstHHI	GCGC	1 cut(s)	2418
BstKTI	GATC	6 cut(s)	301, 1284, 1447, 1700, 1983, 2046
BstMAI	GTCTC	3 cut(s)	947, 1748, 1891
BstMBI	GATC	6 cut(s)	298, 1281, 1444, 1697, 1980, 2043
BstMWI	GCNNNNNNNGC	7 cut(s)	531, 730, 1245, 1254, 1286, 1605, 2408
BstNI	CCWGG	5 cut(s)	74, 494, 861, 1403, 1703
BstSFI	CTRYAG	4 cut(s)	363, 588, 1663, 2409
BstSLI	GKGCMC	1 cut(s)	935
BstV1I	GCAGC	4 cut(s)	885, 1260, 2019, 2022
BstV2I	GAAGAC	3 cut(s)	71, 1927, 2235
BstX2I	RGATCY	2 cut(s)	1444, 1697
BstYI	RGATCY	2 cut(s)	1444, 1697
BstZ17I	GTATAC	1 cut(s)	2222
Bsu36I	CCTNAGG	1 cut(s)	2374
BsuI	GTATCC	2 cut(s)	1325, 1622
BsuRI	GGCC	3 cut(s)	1317, 2245, 2428
BtgI	CCRYGG	1 cut(s)	621
BtgZI	GCGATG	1 cut(s)	2412
BtrI	CACGTC	1 cut(s)	2014
BtsCI	GGATG	4 cut(s)	439, 466, 746, 1425
BtsI	GCAGTG	4 cut(s)	1246, 1779, 1831, 2418
BtsIMutI	CAGTG	6 cut(s)	691, 935, 1246, 1779, 1831, 2418
BveI	ACCTGC	3 cut(s)	77, 581, 1629
Cac8I	GCNNGC	1 cut(s)	2247
CaiI	CAGNNNCTG	1 cut(s)	389
CfoI	GCGC	1 cut(s)	2418
Cfr13I	GGNCC	5 cut(s)	618, 839, 1630, 2378, 2426
Cfr9I	CCCGGG	1 cut(s)	1917
Csp6I	GTAC	4 cut(s)	1684, 1779, 1963, 2017
CspCI	CAANNNNNGTGG	4 cut(s)	637, 672, 757, 792
CviQI	GTAC	4 cut(s)	1684, 1779, 1963, 2017
DdeI	CTNAG	5 cut(s)	123, 944, 1888, 2295, 2374
DpnI	GATC	6 cut(s)	300, 1283, 1446, 1699, 1982, 2045
DpnII	GATC	6 cut(s)	298, 1281, 1444, 1697, 1980, 2043
Eam1104I	CTCTTC	4 cut(s)	1066, 1346, 1383, 1728
EarI	CTCTTC	4 cut(s)	1066, 1346, 1383, 1728
Eco130I	CCWWGG	3 cut(s)	621, 1099, 2157
Eco24I	GRGCYC	1 cut(s)	124
Eco31I	GGTCTC	1 cut(s)	947
Eco47I	GGWCC	4 cut(s)	618, 839, 1630, 2378
Eco57I	CTGAAG	6 cut(s)	657, 803, 921, 1368, 1395, 1611
Eco81I	CCTNAGG	1 cut(s)	2374
Eco88I	CYCGRG	3 cut(s)	1917, 1956, 2335
EcoRII	CCWGG	5 cut(s)	72, 492, 859, 1401, 1701
EcoT14I	CCWWGG	3 cut(s)	621, 1099, 2157
EcoT22I	ATGCAT	1 cut(s)	898
EcoT38I	GRGCYC	1 cut(s)	124
ErhI	CCWWGG	3 cut(s)	621, 1099, 2157
FalI	AAGNNNNNCTT	4 cut(s)	1250, 1282, 2132, 2164
FaqI	GGGAC	1 cut(s)	878
FbaI	TGATCA	1 cut(s)	298
FblI	GTMKAC	2 cut(s)	2192, 2221
Fnu4HI	GCNGC	4 cut(s)	874, 1249, 2033, 2036
FokI	GGATG	4 cut(s)	446, 453, 733, 1432
FriOI	GRGCYC	1 cut(s)	124
Fsp4HI	GCNGC	4 cut(s)	874, 1249, 2033, 2036
FspBI	CTAG	3 cut(s)	78, 557, 1793
GlaI	GCGC	1 cut(s)	2417
GluI	GCNGC	4 cut(s)	874, 1249, 2033, 2036
GsuI	CTGGAG	1 cut(s)	2060
HaeIII	GGCC	3 cut(s)	1317, 2245, 2428
HapII	CCGG	6 cut(s)	107, 570, 1633, 1639, 1918, 2424
HhaI	GCGC	1 cut(s)	2418
Hin6I	GCGC	1 cut(s)	2416
HinP1I	GCGC	1 cut(s)	2416
HincII	GTYRAC	1 cut(s)	2179
HindII	GTYRAC	1 cut(s)	2179
HindIII	AAGCTT	1 cut(s)	1478
HinfI	GANTC	9 cut(s)	13, 407, 580, 830, 866, 1184, 1190, 1761, 1817
HpaII	CCGG	6 cut(s)	107, 570, 1633, 1639, 1918, 2424
HphI	GGTGA	6 cut(s)	187, 970, 1031, 1047, 1610, 2173
Hpy166II	GTNNAC	6 cut(s)	238, 1507, 2017, 2179, 2193, 2222
Hpy8I	GTNNAC	6 cut(s)	238, 1507, 2017, 2179, 2193, 2222
HpyCH4III	ACNGT	1 cut(s)	1300
HpyCH4IV	ACGT	3 cut(s)	1854, 2013, 2175
HpyF10VI	GCNNNNNNNGC	7 cut(s)	531, 730, 1245, 1254, 1286, 1605, 2408
HpyF3I	CTNAG	5 cut(s)	123, 944, 1888, 2295, 2374
HpySE526I	ACGT	3 cut(s)	1854, 2013, 2175
HspAI	GCGC	1 cut(s)	2416
KpnI	GGTACC	1 cut(s)	1966
Ksp22I	TGATCA	1 cut(s)	298
Kzo9I	GATC	6 cut(s)	298, 1281, 1444, 1697, 1980, 2043
LmnI	GCTCC	8 cut(s)	539, 953, 1097, 1641, 1659, 1863, 1921, 2291
Lsp1109I	GCAGC	4 cut(s)	885, 1260, 2019, 2022
LweI	GCATC	9 cut(s)	748, 883, 1348, 1369, 1410, 1569, 1608, 2289, 2389
MaeI	CTAG	3 cut(s)	78, 557, 1793
MaeII	ACGT	3 cut(s)	1854, 2013, 2175
MaeIII	GTNAC	8 cut(s)	193, 211, 544, 667, 976, 1436, 2009, 2322
MalI	GATC	6 cut(s)	300, 1283, 1446, 1699, 1982, 2045
MboI	GATC	6 cut(s)	298, 1281, 1444, 1697, 1980, 2043
MflI	RGATCY	2 cut(s)	1444, 1697
MhlI	GDGCHC	3 cut(s)	124, 935, 1860
MlyI	GAGTC	2 cut(s)	401, 860
MmeI	TCCRAC	6 cut(s)	494, 561, 1218, 1533, 2103, 2327
Mph1103I	ATGCAT	1 cut(s)	898
MroXI	GAANNNNTTC	2 cut(s)	1265, 1515
MseI	TTAA	3 cut(s)	84, 1218, 1412
MslI	CAYNNNNRTG	3 cut(s)	1772, 1943, 2215
MspA1I	CMGCKG	1 cut(s)	1251
MspI	CCGG	6 cut(s)	107, 570, 1633, 1639, 1918, 2424
Mva1269I	GAATGC	1 cut(s)	2034
MvaI	CCWGG	5 cut(s)	74, 494, 861, 1403, 1703
MwoI	GCNNNNNNNGC	7 cut(s)	531, 730, 1245, 1254, 1286, 1605, 2408
NciI	CCSGG	5 cut(s)	108, 1640, 1918, 1919, 2425
NcoI	CCATGG	1 cut(s)	621
NdeII	GATC	6 cut(s)	298, 1281, 1444, 1697, 1980, 2043
NlaIV	GGNNCC	5 cut(s)	280, 491, 1637, 1699, 1964
NmuCI	GTSAC	7 cut(s)	193, 211, 544, 667, 976, 2009, 2322
NsiI	ATGCAT	1 cut(s)	898
PaeR7I	CTCGAG	2 cut(s)	1956, 2335
PaqCI	CACCTGC	1 cut(s)	1629
PcsI	WCGNNNNNNNCGW	1 cut(s)	1860
PctI	GAATGC	1 cut(s)	2034
PdmI	GAANNNNTTC	2 cut(s)	1265, 1515
PfeI	GAWTC	7 cut(s)	13, 580, 830, 1184, 1190, 1761, 1817
PfoI	TCCNGGA	1 cut(s)	1401
PkrI	GCNGC	4 cut(s)	875, 1250, 2034, 2037
PleI	GAGTC	2 cut(s)	401, 860
PpsI	GAGTC	2 cut(s)	401, 860
Psp6I	CCWGG	5 cut(s)	72, 492, 859, 1401, 1701
PspGI	CCWGG	5 cut(s)	72, 492, 859, 1401, 1701
PspN4I	GGNNCC	5 cut(s)	280, 491, 1637, 1699, 1964
PspPI	GGNCC	5 cut(s)	618, 839, 1630, 2378, 2426
PspXI	VCTCGAGB	2 cut(s)	1956, 2335
PstI	CTGCAG	2 cut(s)	592, 2413
PstNI	CAGNNNCTG	1 cut(s)	389
PsuI	RGATCY	2 cut(s)	1444, 1697
RsaI	GTAC	4 cut(s)	1685, 1780, 1964, 2018
RsaNI	GTAC	4 cut(s)	1684, 1779, 1963, 2017
RseI	CAYNNNNRTG	3 cut(s)	1772, 1943, 2215
SaqAI	TTAA	3 cut(s)	84, 1218, 1412
SatI	GCNGC	4 cut(s)	874, 1249, 2033, 2036
Sau3AI	GATC	6 cut(s)	298, 1281, 1444, 1697, 1980, 2043
Sau96I	GGNCC	5 cut(s)	618, 839, 1630, 2378, 2426
SchI	GAGTC	2 cut(s)	401, 860
SduI	GDGCHC	3 cut(s)	124, 935, 1860
SfaNI	GCATC	9 cut(s)	748, 883, 1348, 1369, 1410, 1569, 1608, 2289, 2389
SfcI	CTRYAG	4 cut(s)	363, 588, 1663, 2409
Sfr274I	CTCGAG	2 cut(s)	1956, 2335
SinI	GGWCC	4 cut(s)	618, 839, 1630, 2378
SlaI	CTCGAG	2 cut(s)	1956, 2335
SmaI	CCCGGG	1 cut(s)	1919
SmiMI	CAYNNNNRTG	3 cut(s)	1772, 1943, 2215
SmlI	CTYRAG	4 cut(s)	204, 1956, 2138, 2335
SmoI	CTYRAG	4 cut(s)	204, 1956, 2138, 2335
SsiI	CCGC	2 cut(s)	1251, 2198
SspMI	CTAG	3 cut(s)	78, 557, 1793
StyI	CCWWGG	3 cut(s)	621, 1099, 2157
TaaI	ACNGT	1 cut(s)	1300
TaiI	ACGT	3 cut(s)	1857, 2016, 2178
TaqI	TCGA	8 cut(s)	62, 1295, 1534, 1585, 1863, 1957, 2151, 2336
TaqII	GACCGA	1 cut(s)	1553
TatI	WGTACW	2 cut(s)	1683, 2016
TfiI	GAWTC	7 cut(s)	13, 580, 830, 1184, 1190, 1761, 1817
Tru1I	TTAA	3 cut(s)	84, 1218, 1412
Tru9I	TTAA	3 cut(s)	84, 1218, 1412
TscAI	CASTG	6 cut(s)	691, 935, 1246, 1779, 1838, 2418
TseFI	GTSAC	7 cut(s)	193, 211, 544, 667, 976, 2009, 2322
TseI	GCWGC	4 cut(s)	873, 1248, 2032, 2035
Tsp45I	GTSAC	7 cut(s)	193, 211, 544, 667, 976, 2009, 2322
TspDTI	ATGAA	8 cut(s)	11, 16, 25, 527, 684, 1101, 1746, 1821
TspGWI	ACGGA	3 cut(s)	1418, 2040, 2278
TspMI	CCCGGG	1 cut(s)	1917
TspRI	CASTG	6 cut(s)	691, 935, 1246, 1779, 1838, 2418
VpaK11BI	GGWCC	4 cut(s)	618, 839, 1630, 2378
XapI	RAATTY	4 cut(s)	88, 415, 691, 1408
XbaI	TCTAGA	1 cut(s)	556
XcmI	CCANNNNNNNNNTGG	1 cut(s)	612
XhoI	CTCGAG	2 cut(s)	1956, 2335
XmaI	CCCGGG	1 cut(s)	1917
XmiI	GTMKAC	2 cut(s)	2192, 2221
XmnI	GAANNNNTTC	2 cut(s)	1265, 1515
XspI	CTAG	3 cut(s)	78, 557, 1793
Zsp2I	ATGCAT	1 cut(s)	898

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.