Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0015868.1

Orthogroup ID

OG0002245

Physical Location & Seq

Genomic Coordinates Reverse (-)

206 .. 2715

Gene Structure 2510 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0015868.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2424 bp

atgggaggttggaacttcattcatttcacatgcttcatactcttgtctgttctccatttgtctgaaatctgcatggctgatgttcgaaattttgggaaaattagtccggggtttcaaggagctcagcagaattggatcgacaataatgggttgtttctcttgtcaaaccaatctgaatttggttttggcttcgtcatcactcctcaagatgtcactttgttcctgctttgtattgtccacatggccagcatgaatatagtatggactgcaaataggggctccccagtttctagttccgataaatttgtgtttgatgacaagggtagtttgtctttgcaaaaaagtggaagtgtggtttggtctgtagatactggtggcaaagcaattactgcaatggagttgcgggactcgggaaatttggttttgcttggggatgacaatggagtagtttggcagagttttagtcatccaaccgatactctattatggaaccaggagtttcaggaaggaatgaaacttcaaagcgaaccaagctccaacaatgtgacctacattcttgaaatcaagtccggcgacttgattctttctgcaggttaccaaacaccacagccttattggtccatggggaaggaaagccgtaaaacaatcaacacagaaggtggggcagtcacttcggcatctatcagtgtaaattcatggaagttctatgatagttccaaagtgcgagtatggcaattcattttctcatccaatgttgatgttaatgccacatggattgcagttttgggaaatgatggatatatttctttttccaatcttcagaatggaggttcaaatggtccttcaacgacgaaaataccagagggcctatgcagcacccccgaaccttgtgacgcatattctgaatgtttcagcaacaacaagtgcaagtgcccttcaggtcttagctcccatgcgaattgcaagtcggggattgtcacctcatgttcaaagggttctacaatgcttacaactgctggtgatgggctctattattttgcattggaatttgtttcaccctcttcaagaactgacttggagggttgccaaagctcttgccttagtaattgttcatgtgttgctttgttctatcaaagcagtacaagaaattgttatatgtttgacaggataggtagcttccaagcttacgacaagggctttgattcttatgttaaagtgtcgagtgatggagaagtgtcgagtgatggaggcagtgggggcagcggaagcaagaaacacttcgcttatattgtggtcattgctgtttcgacagtagttgttatctgtggcctactctttgcaggataccgatactaccagaggaagagagatgccccactatctcctgaagatacttcagaagaggataatttcttggaaaatttaactggtatgcccatccgtttcagttacaagaatctacatactgcaacgaataacttctcaaagaagcttgggcaaggaggttttggatcagtttatgaaggagttcttcccgatggaacccgactggctgtgaagaagttggaagggattggtcaggggcagaaagagttccgagctgaagtaaccaccattggcagtattcatcattttcacttggtccggctcaaaggattctgtgcggaaggaagccatcgacttcttgcatatgaatacatggcaaatggttccctggataaatggattttcaagaaaacaaatgaagaatgcttattggattgggagacaagattcaacatagcagtgggtactgccaaaggactagcttatctccatgaagattgtgattcaaagattattcactgtgacataaagcctcaaaacgtgctcctcgacaacaattaccatgccaaagtcgcagatttcggtttggcaaagctaatgaccaaggagcagagccatagccatgttttcacaacacttagaggaactcggggttaccttgcgccagagtggatcacaaaccgtgctatatcggagaagagtgatgtgtatagctatggaatgctgttgctagagattatcggtgggagaaagaactatgaccaatcagaaagttctgaaaaatctcaatttccatcctatgccttcaagatgctagaagaaggcaaaatgaaggacattgtcgactccaagctgaagatagatgacgccgacgagagggtttctaccgcgattattgttgcattgtggtgtatacagcaagacatgtctctgaggccgtcgatggccaaggttgtccaaatctttgaaggggtctgtcctgttcctcagcctccaacttcctcagcaatgatttcttcaacaatgacttcctccggaccaatgtgctgcaacagtgatgcatatttgtctgcagagcatctttctggaccaagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019899 GO:0031625 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044464 GO:0046777 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr

Protein Analysis

807

Amino Acids

88.64

Weight (kDa)

5.78

Isoelectric Point (pI)

38.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002245)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32300
fragaria_vesca	FvH4_2g29050 FvH4_2g29070
malus_domestica	MD00G1144200.v1.1 MD15G1121900.v1.1 MD15G1122800.v1.1 MD15G1125500.v1.1
prunus_persica	Prupe.1G481100_v2.0.a1
pyrus_communis	pycom15g10990 pycom15g11300
rosa_chinensis	RchiOBHm_Chr4g0385931 RchiOBHm_Chr6g0297921 RchiOBHm_Chr6g0297931
rosa_laevigata	RLG00000010199 RLG00000011550 RLG00000011551
rosa_multiflora	Rmu_co8186410.1_g000001 Rmu_sc0007302.1_g000003 Rmu_sc0007302.1_g000004 Rmu_sc0007400.1_g000011 Rmu_sc0011097.1_g000002 Rmu_sc0011097.1_g000003 Rmu_sc0011097.1_g000004 Rmu_sc0015868.1_g000001 Rmu_sc0030316.1_g000001
rosa_roxburghii	Rroxscaffold_5G00333530 Rroxscaffold_7G00170060 Rroxscaffold_7G00178900 Rroxscaffold_7G00178910
rosa_rugosa	Rorug03G0303100 Rorug06G0276800
rosa_samantha	Rh4CG008200 Rh4DG007100 Rh6AG387500 Rh6BG395900 Rh6CG401600 Rh6CG401700 Rh6CG401800 Rh6DG388100
rosa_wichuraiana	Rw4G000320 Rw6G033760 Rw6G033810 Rw6G033820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	581
AccI	GTMKAC	2 cut(s)	2169, 2239
AccII	CGCG	1 cut(s)	2216
AccIII	TCCGGA	1 cut(s)	2360
AciI	CCGC	4 cut(s)	403, 1263, 1664, 2214
AclWI	GGATC	3 cut(s)	143, 1519, 2006
AcoI	YGGCCR	2 cut(s)	243, 2271
AcsI	RAATTY	7 cut(s)	88, 176, 302, 415, 691, 1046, 1420
AcuI	CTGAAG	6 cut(s)	803, 921, 1380, 1407, 1623, 2201
AcyI	GRCGYC	1 cut(s)	2193
AfaI	GTAC	2 cut(s)	1141, 1792
AfiI	CCNNNNNNNGG	1 cut(s)	2202
AflIII	ACRYGT	1 cut(s)	2250
AjnI	CCWGG	2 cut(s)	492, 1713
AjuI	GAANNNNNNNTTGG	4 cut(s)	168, 200, 340, 372
Alw21I	GWGCWC	2 cut(s)	124, 1872
Alw26I	GTCTC	2 cut(s)	1760, 2259
AlwI	GGATC	3 cut(s)	143, 1519, 2006
Ama87I	CYCGRG	2 cut(s)	409, 1974
Aor13HI	TCCGGA	1 cut(s)	2360
AoxI	GGCC	5 cut(s)	243, 865, 1327, 2261, 2271
ApeKI	GCWGC	3 cut(s)	873, 1260, 2373
ApoI	RAATTY	7 cut(s)	88, 176, 302, 415, 691, 1046, 1420
ArsI	GACNNNNNNTTYG	4 cut(s)	950, 982, 1181, 1213
Asp700I	GAANNNNTTC	4 cut(s)	1277, 1478, 1527, 1592
AspLEI	GCGC	1 cut(s)	1990
AspS9I	GGNCC	6 cut(s)	618, 839, 865, 1642, 2363, 2414
AsuC2I	CCSGG	1 cut(s)	108
AsuHPI	GGTGA	3 cut(s)	970, 1031, 1047
AsuII	TTCGAA	1 cut(s)	85
AvaI	CYCGRG	2 cut(s)	409, 1974
AvaII	GGWCC	5 cut(s)	618, 839, 1642, 2363, 2414
BaeGI	GKGCMC	1 cut(s)	935
BalI	TGGCCA	2 cut(s)	245, 2273
BanII	GRGCYC	3 cut(s)	124, 281, 1029
Bbv12I	GWGCWC	2 cut(s)	124, 1872
BbvCI	CCTCAGC	2 cut(s)	2313, 2329
BbvI	GCAGC	3 cut(s)	885, 1272, 2360
BccI	CCATC	9 cut(s)	788, 1016, 1220, 1238, 1445, 1532, 1683, 2128, 2263
BceAI	ACGGC	2 cut(s)	621, 2248
BcgI	CGANNNNNNTGC	2 cut(s)	654, 688
BciT130I	CCWGG	2 cut(s)	494, 1715
BciVI	GTATCC	1 cut(s)	1337
BcnI	CCSGG	1 cut(s)	108
BcoDI	GTCTC	2 cut(s)	1760, 2259
BfaI	CTAG	4 cut(s)	291, 1805, 2057, 2141
BfmI	CTRYAG	3 cut(s)	363, 588, 2397
BfuAI	ACCTGC	1 cut(s)	581
BfuI	GTATCC	1 cut(s)	1337
BisI	GCNGC	3 cut(s)	874, 1261, 2374
BlpI	GCTNAGC	1 cut(s)	123
BlsI	GCNGC	3 cut(s)	875, 1262, 2375
Bme1390I	CCNGG	3 cut(s)	108, 494, 1715
Bme18I	GGWCC	5 cut(s)	618, 839, 1642, 2363, 2414
BmeT110I	CYCGRG	2 cut(s)	409, 1974
BmgT120I	GGNCC	6 cut(s)	618, 839, 865, 1642, 2363, 2414
BmiI	GGNNCC	4 cut(s)	280, 491, 1543, 1711
BmrFI	CCNGG	3 cut(s)	108, 494, 1715
BmrI	ACTGGG	1 cut(s)	278
BmsI	GCATC	5 cut(s)	686, 1360, 2127, 2374, 2413
BmuI	ACTGGG	1 cut(s)	278
Bpu10I	CCTNAGC	2 cut(s)	2313, 2329
Bpu1102I	GCTNAGC	1 cut(s)	123
Bpu14I	TTCGAA	1 cut(s)	85
BpuEI	CTTGAG	1 cut(s)	189
BpuMI	CCSGG	1 cut(s)	108
BsaHI	GRCGYC	1 cut(s)	2193
BsaJI	CCNNGG	5 cut(s)	107, 621, 1713, 1929, 2274
BsaWI	WCCGGW	1 cut(s)	2360
Bsc4I	CCNNNNNNNGG	1 cut(s)	2202
Bse1I	ACTGG	4 cut(s)	284, 376, 1432, 1554
Bse3DI	GCAATG	3 cut(s)	399, 1296, 2340
BseAI	TCCGGA	1 cut(s)	2360
BseBI	CCWGG	2 cut(s)	494, 1715
BseDI	CCNNGG	5 cut(s)	107, 621, 1713, 1929, 2274
BseGI	GGATG	5 cut(s)	439, 466, 746, 1437, 2120
BseLI	CCNNNNNNNGG	1 cut(s)	2202
BseMI	GCAATG	3 cut(s)	399, 1296, 2340
BseMII	CTCAG	4 cut(s)	137, 2249, 2327, 2343
BseNI	ACTGG	4 cut(s)	284, 376, 1432, 1554
BseRI	GAGGAG	2 cut(s)	192, 1862
BseSI	GKGCMC	1 cut(s)	935
BseXI	GCAGC	3 cut(s)	885, 1272, 2360
Bsh1236I	CGCG	1 cut(s)	2216
BshFI	GGCC	5 cut(s)	245, 867, 1329, 2263, 2273
BsiHKAI	GWGCWC	2 cut(s)	124, 1872
BsiHKCI	CYCGRG	2 cut(s)	409, 1974
BsiSI	CCGG	4 cut(s)	107, 570, 1645, 2361
BslFI	GGGAC	1 cut(s)	419
BslI	CCNNNNNNNGG	1 cut(s)	2202
BsmAI	GTCTC	2 cut(s)	1760, 2259
BsmFI	GGGAC	1 cut(s)	419
BsmI	GAATGC	2 cut(s)	1754, 2052
BsnI	GGCC	5 cut(s)	245, 867, 1329, 2263, 2273
BsoBI	CYCGRG	2 cut(s)	409, 1974
Bsp119I	TTCGAA	1 cut(s)	85
Bsp1286I	GDGCHC	5 cut(s)	124, 281, 935, 1029, 1872
Bsp13I	TCCGGA	1 cut(s)	2360
Bsp143I	GATC	3 cut(s)	135, 1511, 1998
Bsp1720I	GCTNAGC	1 cut(s)	123
Bsp19I	CCATGG	1 cut(s)	621
BspACI	CCGC	4 cut(s)	403, 1263, 1664, 2214
BspANI	GGCC	5 cut(s)	245, 867, 1329, 2263, 2273
BspCNI	CTCAG	4 cut(s)	136, 2250, 2326, 2342
BspEI	TCCGGA	1 cut(s)	2360
BspFNI	CGCG	1 cut(s)	2216
BspLI	GGNNCC	4 cut(s)	280, 491, 1543, 1711
BspMAI	CTGCAG	2 cut(s)	592, 2401
BspMI	ACCTGC	1 cut(s)	581
BspPI	GGATC	3 cut(s)	143, 1519, 2006
BspT104I	TTCGAA	1 cut(s)	85
BsrDI	GCAATG	3 cut(s)	399, 1296, 2340
BsrI	ACTGG	4 cut(s)	284, 376, 1432, 1554
BssECI	CCNNGG	5 cut(s)	107, 621, 1713, 1929, 2274
BssMI	GATC	3 cut(s)	135, 1511, 1998
BssNAI	GTATAC	1 cut(s)	2240
BssNI	GRCGYC	1 cut(s)	2193
BssT1I	CCWWGG	3 cut(s)	621, 1929, 2274
Bst1107I	GTATAC	1 cut(s)	2240
Bst2UI	CCWGG	2 cut(s)	494, 1715
Bst4CI	ACNGT	4 cut(s)	1312, 1847, 2009, 2381
Bst6I	CTCTTC	4 cut(s)	1066, 1358, 1395, 2018
BstACI	GRCGYC	1 cut(s)	2193
BstAPI	GCANNNNNTGC	1 cut(s)	389
BstBI	TTCGAA	1 cut(s)	85
BstC8I	GCNNGC	1 cut(s)	247
BstDEI	CTNAG	7 cut(s)	123, 944, 1100, 1964, 2258, 2313, 2329
BstDSI	CCRYGG	1 cut(s)	621
BstEII	GGTNACC	2 cut(s)	593, 1979
BstF5I	GGATG	5 cut(s)	439, 466, 746, 1437, 2120
BstFNI	CGCG	1 cut(s)	2216
BstHHI	GCGC	1 cut(s)	1990
BstKTI	GATC	3 cut(s)	138, 1514, 2001
BstMAI	GTCTC	2 cut(s)	1760, 2259
BstMBI	GATC	3 cut(s)	135, 1511, 1998
BstMWI	GCNNNNNNNGC	7 cut(s)	389, 531, 730, 873, 1257, 1266, 1898
BstNI	CCWGG	2 cut(s)	494, 1715
BstNSI	RCATGY	2 cut(s)	33, 2254
BstPI	GGTNACC	2 cut(s)	593, 1979
BstSCI	CCNGG	3 cut(s)	106, 492, 1713
BstSFI	CTRYAG	3 cut(s)	363, 588, 2397
BstSLI	GKGCMC	1 cut(s)	935
BstUI	CGCG	1 cut(s)	2216
BstV1I	GCAGC	3 cut(s)	885, 1272, 2360
BstZ17I	GTATAC	1 cut(s)	2240
BsuI	GTATCC	1 cut(s)	1337
BsuRI	GGCC	5 cut(s)	245, 867, 1329, 2263, 2273
BtgI	CCRYGG	1 cut(s)	621
BtsCI	GGATG	5 cut(s)	439, 466, 746, 1437, 2120
BtsI	GCAGTG	2 cut(s)	1258, 1791
BtsIMutI	CAGTG	5 cut(s)	691, 1258, 1791, 1843, 2386
BveI	ACCTGC	1 cut(s)	581
Cac8I	GCNNGC	1 cut(s)	247
CfoI	GCGC	1 cut(s)	1990
Cfr13I	GGNCC	6 cut(s)	618, 839, 865, 1642, 2363, 2414
CseI	GACGC	2 cut(s)	902, 2201
Csp6I	GTAC	2 cut(s)	1140, 1791
CspCI	CAANNNNNGTGG	2 cut(s)	757, 792
CviQI	GTAC	2 cut(s)	1140, 1791
DdeI	CTNAG	7 cut(s)	123, 944, 1100, 1964, 2258, 2313, 2329
DpnI	GATC	3 cut(s)	137, 1513, 2000
DpnII	GATC	3 cut(s)	135, 1511, 1998
EaeI	YGGCCR	2 cut(s)	243, 2271
Eam1104I	CTCTTC	4 cut(s)	1066, 1358, 1395, 2018
EarI	CTCTTC	4 cut(s)	1066, 1358, 1395, 2018
Ecl136II	GAGCTC	1 cut(s)	122
Eco130I	CCWWGG	3 cut(s)	621, 1929, 2274
Eco24I	GRGCYC	3 cut(s)	124, 281, 1029
Eco47I	GGWCC	5 cut(s)	618, 839, 1642, 2363, 2414
Eco53kI	GAGCTC	1 cut(s)	122
Eco57I	CTGAAG	6 cut(s)	803, 921, 1380, 1407, 1623, 2201
Eco88I	CYCGRG	2 cut(s)	409, 1974
Eco91I	GGTNACC	2 cut(s)	593, 1979
EcoICRI	GAGCTC	1 cut(s)	122
EcoO109I	RGGNCCY	1 cut(s)	865
EcoO65I	GGTNACC	2 cut(s)	593, 1979
EcoRII	CCWGG	2 cut(s)	492, 1713
EcoT14I	CCWWGG	3 cut(s)	621, 1929, 2274
EcoT22I	ATGCAT	1 cut(s)	2389
EcoT38I	GRGCYC	3 cut(s)	124, 281, 1029
ErhI	CCWWGG	3 cut(s)	621, 1929, 2274
FalI	AAGNNNNNCTT	4 cut(s)	1262, 1294, 1515, 1547
FaqI	GGGAC	1 cut(s)	419
FauI	CCCGC	1 cut(s)	396
FauNDI	CATATG	1 cut(s)	1690
FblI	GTMKAC	2 cut(s)	2169, 2239
Fnu4HI	GCNGC	3 cut(s)	874, 1261, 2374
FokI	GGATG	5 cut(s)	446, 453, 733, 1424, 2107
FriOI	GRGCYC	3 cut(s)	124, 281, 1029
Fsp4HI	GCNGC	3 cut(s)	874, 1261, 2374
FspBI	CTAG	4 cut(s)	291, 1805, 2057, 2141
GlaI	GCGC	1 cut(s)	1989
GluI	GCNGC	3 cut(s)	874, 1261, 2374
HaeIII	GGCC	5 cut(s)	245, 867, 1329, 2263, 2273
HapII	CCGG	4 cut(s)	107, 570, 1645, 2361
HgaI	GACGC	2 cut(s)	902, 2201
HhaI	GCGC	1 cut(s)	1990
Hin1I	GRCGYC	1 cut(s)	2193
Hin6I	GCGC	1 cut(s)	1988
HinP1I	GCGC	1 cut(s)	1988
HincII	GTYRAC	1 cut(s)	2170
HindII	GTYRAC	1 cut(s)	2170
HindIII	AAGCTT	2 cut(s)	1182, 1490
HinfI	GANTC	8 cut(s)	407, 580, 1202, 1456, 1656, 1773, 1829, 2171
HpaII	CCGG	4 cut(s)	107, 570, 1645, 2361
HphI	GGTGA	3 cut(s)	970, 1031, 1047
Hpy166II	GTNNAC	3 cut(s)	238, 2170, 2240
Hpy8I	GTNNAC	3 cut(s)	238, 2170, 2240
Hpy99I	CGWCG	3 cut(s)	853, 2201, 2269
HpyCH4III	ACNGT	4 cut(s)	1312, 1847, 2009, 2381
HpyCH4IV	ACGT	1 cut(s)	1866
HpyF10VI	GCNNNNNNNGC	7 cut(s)	389, 531, 730, 873, 1257, 1266, 1898
HpyF3I	CTNAG	7 cut(s)	123, 944, 1100, 1964, 2258, 2313, 2329
HpySE526I	ACGT	1 cut(s)	1866
Hsp92I	GRCGYC	1 cut(s)	2193
HspAI	GCGC	1 cut(s)	1988
Kpn2I	TCCGGA	1 cut(s)	2360
Kzo9I	GATC	3 cut(s)	135, 1511, 1998
LmnI	GCTCC	6 cut(s)	119, 284, 539, 953, 1875, 1933
Lsp1109I	GCAGC	3 cut(s)	885, 1272, 2360
LweI	GCATC	5 cut(s)	686, 1360, 2127, 2374, 2413
MaeI	CTAG	4 cut(s)	291, 1805, 2057, 2141
MaeII	ACGT	1 cut(s)	1866
MalI	GATC	3 cut(s)	137, 1513, 2000
MboI	GATC	3 cut(s)	135, 1511, 1998
MhlI	GDGCHC	5 cut(s)	124, 281, 935, 1029, 1872
MlsI	TGGCCA	2 cut(s)	245, 2273
MluNI	TGGCCA	2 cut(s)	245, 2273
MlyI	GAGTC	2 cut(s)	401, 2165
MmeI	TCCRAC	4 cut(s)	494, 561, 1545, 2345
Mox20I	TGGCCA	2 cut(s)	245, 2273
Mph1103I	ATGCAT	1 cut(s)	2389
MroI	TCCGGA	1 cut(s)	2360
MroXI	GAANNNNTTC	4 cut(s)	1277, 1478, 1527, 1592
MscI	TGGCCA	2 cut(s)	245, 2273
MseI	TTAA	3 cut(s)	762, 1212, 1424
MslI	CAYNNNNRTG	3 cut(s)	1784, 1947, 2233
Msp20I	TGGCCA	2 cut(s)	245, 2273
MspA1I	CMGCKG	1 cut(s)	1263
MspI	CCGG	4 cut(s)	107, 570, 1645, 2361
MspR9I	CCNGG	3 cut(s)	108, 494, 1715
Mva1269I	GAATGC	2 cut(s)	1754, 2052
MvaI	CCWGG	2 cut(s)	494, 1715
MvnI	CGCG	1 cut(s)	2216
MwoI	GCNNNNNNNGC	7 cut(s)	389, 531, 730, 873, 1257, 1266, 1898
NciI	CCSGG	1 cut(s)	108
NcoI	CCATGG	1 cut(s)	621
NdeI	CATATG	1 cut(s)	1690
NdeII	GATC	3 cut(s)	135, 1511, 1998
NlaIV	GGNNCC	4 cut(s)	280, 491, 1543, 1711
NmuCI	GTSAC	6 cut(s)	211, 544, 667, 890, 976, 1847
NsiI	ATGCAT	1 cut(s)	2389
NspI	RCATGY	2 cut(s)	33, 2254
NspV	TTCGAA	1 cut(s)	85
PciI	ACATGT	1 cut(s)	2250
PcsI	WCGNNNNNNNCGW	1 cut(s)	1872
PctI	GAATGC	2 cut(s)	1754, 2052
PdmI	GAANNNNTTC	4 cut(s)	1277, 1478, 1527, 1592
PfeI	GAWTC	6 cut(s)	580, 1202, 1456, 1656, 1773, 1829
PflFI	GACNNNGTC	1 cut(s)	2165
PkrI	GCNGC	3 cut(s)	875, 1262, 2375
PleI	GAGTC	2 cut(s)	401, 2165
PpsI	GAGTC	2 cut(s)	401, 2165
PscI	ACATGT	1 cut(s)	2250
Psp124BI	GAGCTC	1 cut(s)	124
Psp6I	CCWGG	2 cut(s)	492, 1713
PspEI	GGTNACC	2 cut(s)	593, 1979
PspGI	CCWGG	2 cut(s)	492, 1713
PspN4I	GGNNCC	4 cut(s)	280, 491, 1543, 1711
PspPI	GGNCC	6 cut(s)	618, 839, 865, 1642, 2363, 2414
PstI	CTGCAG	2 cut(s)	592, 2401
PsyI	GACNNNGTC	1 cut(s)	2165
RsaI	GTAC	2 cut(s)	1141, 1792
RsaNI	GTAC	2 cut(s)	1140, 1791
RseI	CAYNNNNRTG	3 cut(s)	1784, 1947, 2233
SacI	GAGCTC	1 cut(s)	124
SalI	GTCGAC	1 cut(s)	2168
SaqAI	TTAA	3 cut(s)	762, 1212, 1424
SatI	GCNGC	3 cut(s)	874, 1261, 2374
Sau3AI	GATC	3 cut(s)	135, 1511, 1998
Sau96I	GGNCC	6 cut(s)	618, 839, 865, 1642, 2363, 2414
SchI	GAGTC	2 cut(s)	401, 2165
ScrFI	CCNGG	3 cut(s)	108, 494, 1715
SduI	GDGCHC	5 cut(s)	124, 281, 935, 1029, 1872
SfaNI	GCATC	5 cut(s)	686, 1360, 2127, 2374, 2413
SfcI	CTRYAG	3 cut(s)	363, 588, 2397
SfuI	TTCGAA	1 cut(s)	85
SinI	GGWCC	5 cut(s)	618, 839, 1642, 2363, 2414
SmiMI	CAYNNNNRTG	3 cut(s)	1784, 1947, 2233
SmlI	CTYRAG	1 cut(s)	204
SmoI	CTYRAG	1 cut(s)	204
SsiI	CCGC	4 cut(s)	403, 1263, 1664, 2214
SspMI	CTAG	4 cut(s)	291, 1805, 2057, 2141
SstI	GAGCTC	1 cut(s)	124
StyD4I	CCNGG	3 cut(s)	106, 492, 1713
StyI	CCWWGG	3 cut(s)	621, 1929, 2274
TaaI	ACNGT	4 cut(s)	1312, 1847, 2009, 2381
TaiI	ACGT	1 cut(s)	1869
TaqI	TCGA	9 cut(s)	85, 138, 1220, 1238, 1307, 1678, 1875, 2169, 2267
TatI	WGTACW	1 cut(s)	1139
TfiI	GAWTC	6 cut(s)	580, 1202, 1456, 1656, 1773, 1829
Tru1I	TTAA	3 cut(s)	762, 1212, 1424
Tru9I	TTAA	3 cut(s)	762, 1212, 1424
TscAI	CASTG	5 cut(s)	691, 1258, 1791, 1850, 2386
TseFI	GTSAC	6 cut(s)	211, 544, 667, 890, 976, 1847
TseI	GCWGC	3 cut(s)	873, 1260, 2373
Tsp45I	GTSAC	6 cut(s)	211, 544, 667, 890, 976, 1847
TspGWI	ACGGA	1 cut(s)	1430
TspRI	CASTG	5 cut(s)	691, 1258, 1791, 1850, 2386
Tth111I	GACNNNGTC	1 cut(s)	2165
VpaK11BI	GGWCC	5 cut(s)	618, 839, 1642, 2363, 2414
XapI	RAATTY	7 cut(s)	88, 176, 302, 415, 691, 1046, 1420
XceI	RCATGY	2 cut(s)	33, 2254
XcmI	CCANNNNNNNNNTGG	2 cut(s)	176, 612
XmiI	GTMKAC	2 cut(s)	2169, 2239
XmnI	GAANNNNTTC	4 cut(s)	1277, 1478, 1527, 1592
XspI	CTAG	4 cut(s)	291, 1805, 2057, 2141
Zsp2I	ATGCAT	1 cut(s)	2389

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.